Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:09:21 (1907487): wrapper (7.7.26015): starting
08:09:21 (1907487): wrapper: running run_atlas (--nthreads 4)
[2025-10-19 08:09:21] Arguments: --nthreads 4
[2025-10-19 08:09:21] Threads: 4
[2025-10-19 08:09:21] Checking for CVMFS
[2025-10-19 08:09:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 08:09:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 08:09:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 08:09:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 08:09:21] 2.9.2.0 85452 4553 100096 151877 2 56 23414030 36864000 0 130560 0 4786796 99.993 162513 2074 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-19 08:09:21] CVMFS is ok
[2025-10-19 08:09:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 08:09:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 08:09:21] Further information can be found at the LHC@home message board.
[2025-10-19 08:09:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 08:09:21] Checking for apptainer binary...
[2025-10-19 08:09:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 08:09:21] Running /usr/bin/apptainer --version
[2025-10-19 08:09:21] apptainer version 1.4.1-1.1
[2025-10-19 08:09:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 08:09:21] thA373a
[2025-10-19 08:09:21] apptainer works
[2025-10-19 08:09:21] Set ATHENA_PROC_NUMBER=4
[2025-10-19 08:09:21] Set ATHENA_CORE_NUMBER=4
[2025-10-19 08:09:21] Starting ATLAS job with PandaID=6848040825
[2025-10-19 08:09:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 09:26:40]  *** The last 200 lines of the pilot log: ***
[2025-10-19 09:26:40] 2025-10-19 07:25:46,644 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-19 09:26:40] 2025-10-19 07:25:46,645 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 09:26:40] 2025-10-19 07:25:46,645 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 09:26:40] 2025-10-19 07:25:46,645 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 09:26:40] 2025-10-19 07:25:46,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 09:26:40] 2025-10-19 07:25:46,666 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-19 09:26:40] 2025-10-19 07:25:46,666 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-19 09:26:40] 2025-10-19 07:25:46,666 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 09:26:40] 2025-10-19 07:25:46,666 | INFO     | will abort loop
[2025-10-19 09:26:40] 2025-10-19 07:25:46,889 | INFO     | all data control threads have been joined
[2025-10-19 09:26:40] 2025-10-19 07:25:47,086 | INFO     | all job control threads have been joined
[2025-10-19 09:26:40] 2025-10-19 07:25:47,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 09:26:40] 2025-10-19 07:25:47,650 | INFO     | [job] retrieve thread has finished
[2025-10-19 09:26:40] 2025-10-19 07:25:47,650 | INFO     | [job] queue monitor thread has finished
[2025-10-19 09:26:40] 2025-10-19 07:25:47,672 | INFO     | [job] job monitor thread has finished
[2025-10-19 09:26:40] 2025-10-19 07:25:47,844 | INFO     | all payload control threads have been joined
[2025-10-19 09:26:40] 2025-10-19 07:25:47,894 | INFO     | [data] control thread has finished
[2025-10-19 09:26:40] 2025-10-19 07:25:48,026 | INFO     | [payload] failed_post thread has finished
[2025-10-19 09:26:40] 2025-10-19 07:25:48,092 | INFO     | [job] control thread has finished
[2025-10-19 09:26:40] 2025-10-19 07:25:48,234 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 09:26:40] 2025-10-19 07:25:48,433 | INFO     | [job] validate thread has finished
[2025-10-19 09:26:40] 2025-10-19 07:25:48,498 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 09:26:40] 2025-10-19 07:25:48,667 | INFO     | [data] copytool_out thread has finished
[2025-10-19 09:26:40] 2025-10-19 07:25:48,720 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 09:26:40] 2025-10-19 07:25:48,850 | INFO     | [payload] control thread has finished
[2025-10-19 09:26:40] 2025-10-19 07:25:48,883 | INFO     | [payload] validate_post thread has finished
[2025-10-19 09:26:40] 2025-10-19 07:25:49,026 | INFO     | [data] copytool_in thread has finished
[2025-10-19 09:26:40] 2025-10-19 07:25:51,482 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 09:26:40] 2025-10-19 07:25:57,008 | INFO     | job.realtimelogging is not enabled
[2025-10-19 09:26:40] 2025-10-19 07:25:58,013 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 09:26:40] 2025-10-19 07:26:34,322 | INFO     | [monitor] cgroup control has ended
[2025-10-19 09:26:40] 2025-10-19 07:26:35,167 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140652069541696)>', '<ExcThread(monitor, started 140651429611264)>']
[2025-10-19 09:26:40] 2025-10-19 07:26:35,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 09:26:40] 2025-10-19 07:26:35,875 | INFO     | [monitor] control thread has ended
[2025-10-19 09:26:40] 2025-10-19 07:26:40,193 | INFO     | all workflow threads have been joined
[2025-10-19 09:26:40] 2025-10-19 07:26:40,193 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 09:26:40] 2025-10-19 07:26:40,193 | INFO     | traces error code: 0
[2025-10-19 09:26:40] 2025-10-19 07:26:40,193 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 09:26:40] 2025-10-19 07:26:40,273 [wrapper] ==== pilot stdout END ====
[2025-10-19 09:26:40] 2025-10-19 07:26:40,277 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 09:26:40] 2025-10-19 07:26:40,281 [wrapper] pilotpid: 1911283
[2025-10-19 09:26:40] 2025-10-19 07:26:40,285 [wrapper] Pilot exit status: 0
[2025-10-19 09:26:40] 2025-10-19 07:26:40,295 [wrapper] pandaids: 6848040825
[2025-10-19 09:26:40] 2025-10-19 07:26:40,318 [wrapper] cleanup supervisor_pilot 1930606 1911284
[2025-10-19 09:26:40] 2025-10-19 07:26:40,322 [wrapper] Test setup, not cleaning
[2025-10-19 09:26:40] 2025-10-19 07:26:40,325 [wrapper] apfmon messages muted
[2025-10-19 09:26:40] 2025-10-19 07:26:40,328 [wrapper] ==== wrapper stdout END ====
[2025-10-19 09:26:40] 2025-10-19 07:26:40,332 [wrapper] ==== wrapper stderr END ====
[2025-10-19 09:26:40]  *** Error codes and diagnostics ***
[2025-10-19 09:26:40]     "exeErrorCode": 0,
[2025-10-19 09:26:40]     "exeErrorDiag": "",
[2025-10-19 09:26:40]     "pilotErrorCode": 0,
[2025-10-19 09:26:40]     "pilotErrorDiag": "",
[2025-10-19 09:26:40]  *** Listing of results directory ***
[2025-10-19 09:26:40] total 427348
[2025-10-19 09:26:40] -rw-r--r-- 1 boinc boinc    557409 Oct 18 19:39 pilot3.tar.gz
[2025-10-19 09:26:40] -rwx------ 1 boinc boinc     36292 Oct 18 19:40 runpilot2-wrapper.sh
[2025-10-19 09:26:40] -rw-r--r-- 1 boinc boinc      5112 Oct 18 19:40 queuedata.json
[2025-10-19 09:26:40] -rw-r--r-- 1 boinc boinc       100 Oct 19 08:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 09:26:40] -rwxr-xr-x 1 boinc boinc      7986 Oct 19 08:09 run_atlas
[2025-10-19 09:26:40] -rw-r--r-- 1 boinc boinc       105 Oct 19 08:09 job.xml
[2025-10-19 09:26:40] -rw-r--r-- 2 boinc boinc 229447166 Oct 19 08:09 EVNT.46771634._001920.pool.root.1
[2025-10-19 09:26:40] -rw-r--r-- 2 boinc boinc    569670 Oct 19 08:09 input.tar.gz
[2025-10-19 09:26:40] -rw-r--r-- 2 boinc boinc     15120 Oct 19 08:09 start_atlas.sh
[2025-10-19 09:26:40] drwxrwx--x 2 boinc boinc      4096 Oct 19 08:09 shared
[2025-10-19 09:26:40] -rw-r--r-- 1 boinc boinc         0 Oct 19 08:09 boinc_setup_complete
[2025-10-19 09:26:40] -rw-r--r-- 1 boinc boinc      6376 Oct 19 08:09 init_data.xml
[2025-10-19 09:26:40] -rw-r--r-- 1 boinc boinc         0 Oct 19 08:09 boinc_lockfile
[2025-10-19 09:26:40] -rw-r--r-- 1 boinc boinc      2558 Oct 19 08:09 pandaJob.out
[2025-10-19 09:26:40] -rw------- 1 boinc boinc    976750 Oct 19 08:09 agis_schedconf.cvmfs.json
[2025-10-19 09:26:40] -rw------- 1 boinc boinc   1560740 Oct 19 08:09 agis_ddmendpoints.agis.ALL.json
[2025-10-19 09:26:40] drwx------ 5 boinc boinc      4096 Oct 19 08:09 pilot3
[2025-10-19 09:26:40] -rw------- 1 boinc boinc        95 Oct 19 09:24 pilot_heartbeat.json
[2025-10-19 09:26:40] -rw------- 1 boinc boinc 202395972 Oct 19 09:25 HITS.46771637._045550.pool.root.1
[2025-10-19 09:26:40] -rw-r--r-- 1 boinc boinc       529 Oct 19 09:25 boinc_task_state.xml
[2025-10-19 09:26:40] -rw------- 1 boinc boinc      1019 Oct 19 09:25 memory_monitor_summary.json
[2025-10-19 09:26:40] -rw------- 1 boinc boinc    259107 Oct 19 09:25 log.46771637._045550.job.log.tgz.1
[2025-10-19 09:26:40] -rw------- 1 boinc boinc      7758 Oct 19 09:25 heartbeat.json
[2025-10-19 09:26:40] -rw-r--r-- 1 boinc boinc      8192 Oct 19 09:26 boinc_mmap_file
[2025-10-19 09:26:40] -rw-r--r-- 1 boinc boinc        27 Oct 19 09:26 wrapper_checkpoint.txt
[2025-10-19 09:26:40] -rw------- 1 boinc boinc      4814 Oct 19 09:26 pilotlog.txt
[2025-10-19 09:26:40] -rw------- 1 boinc boinc    674656 Oct 19 09:26 log.46771637._045550.job.log.1
[2025-10-19 09:26:40] -rw------- 1 boinc boinc       357 Oct 19 09:26 output.list
[2025-10-19 09:26:40] -rw-r--r-- 1 boinc boinc       620 Oct 19 09:26 runtime_log
[2025-10-19 09:26:40] -rw------- 1 boinc boinc    952320 Oct 19 09:26 result.tar.gz
[2025-10-19 09:26:40] -rw-r--r-- 1 boinc boinc      8782 Oct 19 09:26 runtime_log.err
[2025-10-19 09:26:40] -rw------- 1 boinc boinc       659 Oct 19 09:26 157MDmu5PU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmfdcMDm7DeKGo.diag
[2025-10-19 09:26:40] -rw-r--r-- 1 boinc boinc      7312 Oct 19 09:26 stderr.txt
[2025-10-19 09:26:40] HITS file was successfully produced:
[2025-10-19 09:26:40] -rw------- 1 boinc boinc 202395972 Oct 19 09:25 shared/HITS.pool.root.1
[2025-10-19 09:26:40]  *** Contents of shared directory: ***
[2025-10-19 09:26:40] total 423244
[2025-10-19 09:26:40] -rw-r--r-- 2 boinc boinc 229447166 Oct 19 08:09 ATLAS.root_0
[2025-10-19 09:26:40] -rw-r--r-- 2 boinc boinc    569670 Oct 19 08:09 input.tar.gz
[2025-10-19 09:26:40] -rw-r--r-- 2 boinc boinc     15120 Oct 19 08:09 start_atlas.sh
[2025-10-19 09:26:40] -rw------- 1 boinc boinc 202395972 Oct 19 09:25 HITS.pool.root.1
[2025-10-19 09:26:40] -rw------- 1 boinc boinc    952320 Oct 19 09:26 result.tar.gz
09:26:42 (1907487): run_atlas exited; CPU time 17339.987237
09:26:42 (1907487): called boinc_finish(0)

</stderr_txt>
]]>

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