Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:29:22 (4067017): wrapper (7.7.26015): starting
13:29:22 (4067017): wrapper: running run_atlas (--nthreads 12)
[2025-10-18 13:29:22] Arguments: --nthreads 12
[2025-10-18 13:29:22] Threads: 12
[2025-10-18 13:29:22] Checking for CVMFS
[2025-10-18 13:29:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 13:29:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 13:29:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 13:29:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 13:29:23] 2.11.5.0 2495 40249 332608 151863 2 372 28037096 45568001 14085 130560 0 355626417 99.845 160664687 19853 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-18 13:29:23] CVMFS is ok
[2025-10-18 13:29:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 13:29:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 13:29:23] Further information can be found at the LHC@home message board.
[2025-10-18 13:29:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 13:29:23] Checking for apptainer binary...
[2025-10-18 13:29:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 13:29:23] Running /usr/bin/apptainer --version
[2025-10-18 13:29:23] apptainer version 1.4.1-1.el9
[2025-10-18 13:29:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 13:29:23] wns0052.triumf.lcg
[2025-10-18 13:29:23] apptainer works
[2025-10-18 13:29:23] Set ATHENA_PROC_NUMBER=12
[2025-10-18 13:29:23] Set ATHENA_CORE_NUMBER=12
[2025-10-18 13:29:23] Starting ATLAS job with PandaID=6848042240
[2025-10-18 13:29:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 13:32:56]  *** The last 200 lines of the pilot log: ***
[2025-10-18 13:32:56] 2025-10-18 20:32:24,986 | WARNING  | found no stored workdir sizes
[2025-10-18 13:32:56] 2025-10-18 20:32:24,987 | INFO     | will not add max space = 0 B to job metrics
[2025-10-18 13:32:56] 2025-10-18 20:32:24,987 | WARNING  | wrong length of table data, x=[1760819405.0], y=[1769.0] (must be same and length>=4)
[2025-10-18 13:32:56] 2025-10-18 20:32:24,987 | INFO     | could have reported an average CPU frequency of 2028 MHz (4 samples)
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | ..............................
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . Timing measurements:
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . get job = 0 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . initial setup = 3 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . payload setup = 6 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . stage-in = 0 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . payload execution = 19 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . stage-out = 0 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . log creation = 0 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | ..............................
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6848042240/pilotlog.txt
[2025-10-18 13:32:56] 2025-10-18 20:32:25,007 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-18 13:32:56] - Log from pilotlog.txt -
[2025-10-18 13:32:56] 2025-10-18 20:32:24,986 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 13:32:56] 2025-10-18 20:32:24,986 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 13:32:56] 2025-10-18 20:32:24,986 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 13:32:56] 2025-10-18 20:32:24,986 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 13:32:56] 2025-10-18 20:32:24,986 | WARNING  | found no stored workdir sizes
[2025-10-18 13:32:56] 2025-10-18 20:32:24,987 | INFO     | will not add max space = 0 B to job metrics
[2025-10-18 13:32:56] 2025-10-18 20:32:24,987 | WARNING  | wrong length of table data, x=[1760819405.0], y=[1769.0] (must be same and length>=4)
[2025-10-18 13:32:56] 2025-10-18 20:32:24,987 | INFO     | could have reported an average CPU frequency of 2028 MHz (4 samples)
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | ..............................
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . Timing measurements:
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . get job = 0 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . initial setup = 3 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . payload setup = 6 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . stage-in = 0 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . payload execution = 19 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . stage-out = 0 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . log creation = 0 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | ..............................
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6848042240/pilotlog.txt
[2025-10-18 13:32:56] 2025-10-18 20:32:25,007 | WARNING  | 
[2025-10-18 13:32:56] [begin log extracts]
[2025-10-18 13:32:56] - Log from pilotlog.txt -
[2025-10-18 13:32:56] 2025-10-18 20:32:24,986 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 13:32:56] 2025-10-18 20:32:24,986 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 13:32:56] 2025-10-18 20:32:24,986 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 13:32:56] 2025-10-18 20:32:24,986 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 13:32:56] 2025-10-18 20:32:24,986 | WARNING  | found no stored workdir sizes
[2025-10-18 13:32:56] 2025-10-18 20:32:24,987 | INFO     | will not add max space = 0 B to job metrics
[2025-10-18 13:32:56] 2025-10-18 20:32:24,987 | WARNING  | wrong length of table data, x=[1760819405.0], y=[1769.0] (must be same and length>=4)
[2025-10-18 13:32:56] 2025-10-18 20:32:24,987 | INFO     | could have reported an average CPU frequency of 2028 MHz (4 samples)
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | ..............................
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . Timing measurements:
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . get job = 0 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . initial setup = 3 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . payload setup = 6 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . stage-in = 0 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . payload execution = 19 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . stage-out = 0 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | . log creation = 0 s
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | ..............................
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-18 13:32:56] 2025-10-18 20:32:24,988 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6848042240/pilotlog.txt
[2025-10-18 13:32:56] [end log extracts]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,008 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-18 13:32:56] 2025-10-18 20:32:25,009 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-18 13:32:56] 2025-10-18 20:32:25,085 | INFO     | 
[2025-10-18 13:32:56] 2025-10-18 20:32:25,086 | INFO     | job summary report
[2025-10-18 13:32:56] 2025-10-18 20:32:25,086 | INFO     | --------------------------------------------------
[2025-10-18 13:32:56] 2025-10-18 20:32:25,086 | INFO     | PanDA job id: 6848042240
[2025-10-18 13:32:56] 2025-10-18 20:32:25,086 | INFO     | task id: 46771637
[2025-10-18 13:32:56] 2025-10-18 20:32:25,086 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-18 13:30:15,012 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-18 13:32:56] 2025-10-18 20:32:25,086 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 13:32:56] 2025-10-18 20:32:25,086 | INFO     | pilot state: failed 
[2025-10-18 13:32:56] 2025-10-18 20:32:25,086 | INFO     | transexitcode: 65
[2025-10-18 13:32:56] 2025-10-18 20:32:25,086 | INFO     | exeerrorcode: 65
[2025-10-18 13:32:56] 2025-10-18 20:32:25,086 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-18 13:32:56] 2025-10-18 20:32:25,086 | INFO     | exitcode: 65
[2025-10-18 13:32:56] 2025-10-18 20:32:25,086 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-18 13:32:56] 2025-10-18 20:32:25,086 | INFO     | cpuconsumptiontime: 23 s
[2025-10-18 13:32:56] 2025-10-18 20:32:25,086 | INFO     | nevents: 0
[2025-10-18 13:32:56] 2025-10-18 20:32:25,087 | INFO     | neventsw: 0
[2025-10-18 13:32:56] 2025-10-18 20:32:25,087 | INFO     | pid: 4077234
[2025-10-18 13:32:56] 2025-10-18 20:32:25,087 | INFO     | pgrp: 4077234
[2025-10-18 13:32:56] 2025-10-18 20:32:25,087 | INFO     | corecount: 12
[2025-10-18 13:32:56] 2025-10-18 20:32:25,087 | INFO     | event service: False
[2025-10-18 13:32:56] 2025-10-18 20:32:25,087 | INFO     | sizes: {0: 2348920, 6: 2349182, 11: 2349210, 30: 2376789, 31: 2376789, 152: 2376955}
[2025-10-18 13:32:56] 2025-10-18 20:32:25,087 | INFO     | --------------------------------------------------
[2025-10-18 13:32:56] 2025-10-18 20:32:25,087 | INFO     | 
[2025-10-18 13:32:56] 2025-10-18 20:32:25,087 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-18 13:32:56] 2025-10-18 20:32:25,112 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,112 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,112 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,112 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,113 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,113 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,113 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,113 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,113 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,113 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,113 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,113 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,113 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,113 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,114 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,114 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,114 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 13:32:56] 2025-10-18 20:32:25,114 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,114 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 13:32:56] 2025-10-18 20:32:25,114 | INFO     | job 6848042240 has completed (purged errors)
[2025-10-18 13:32:56] 2025-10-18 20:32:25,114 | INFO     | overall cleanup function is called
[2025-10-18 13:32:56] 2025-10-18 20:32:26,120 | INFO     | --- collectZombieJob: --- 10, [4077234]
[2025-10-18 13:32:56] 2025-10-18 20:32:26,121 | INFO     | zombie collector waiting for pid 4077234
[2025-10-18 13:32:56] 2025-10-18 20:32:26,121 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 13:32:56] 2025-10-18 20:32:26,121 | INFO     | collected zombie processes
[2025-10-18 13:32:56] 2025-10-18 20:32:26,121 | INFO     | will attempt to kill all subprocesses of pid=4077234
[2025-10-18 13:32:56] 2025-10-18 20:32:26,385 | INFO     | process IDs to be killed: [4077234] (in reverse order)
[2025-10-18 13:32:56] 2025-10-18 20:32:26,467 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 13:32:56] 2025-10-18 20:32:26,467 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 13:32:56] 2025-10-18 20:32:26,477 | INFO     | did not find any defunct processes belonging to 4077234
[2025-10-18 13:32:56] 2025-10-18 20:32:26,485 | INFO     | did not find any defunct processes belonging to 4077234
[2025-10-18 13:32:56] 2025-10-18 20:32:26,485 | INFO     | ready for new job
[2025-10-18 13:32:56] 2025-10-18 20:32:26,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 13:32:56] 2025-10-18 20:32:26,487 | INFO     | ***************************************
[2025-10-18 13:32:56] 2025-10-18 20:32:26,487 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 13:32:56] 2025-10-18 20:32:26,487 | INFO     | ***************************************
[2025-10-18 13:32:56] 2025-10-18 20:32:26,488 | INFO     | 
[2025-10-18 13:32:56] 2025-10-18 20:32:26,490 | INFO     | architecture information:
[2025-10-18 13:32:56] 2025-10-18 20:32:26,490 | INFO     | executing command: cat /etc/os-release
[2025-10-18 13:32:56] 2025-10-18 20:32:26,505 | INFO     | cat /etc/os-release:
[2025-10-18 13:32:56] NAME="CentOS Linux"
[2025-10-18 13:32:56] VERSION="7 (Core)"
[2025-10-18 13:32:56] ID="centos"
[2025-10-18 13:32:56] ID_LIKE="rhel fedora"
[2025-10-18 13:32:56] VERSION_ID="7"
[2025-10-18 13:32:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 13:32:56] ANSI_COLOR="0;31"
[2025-10-18 13:32:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 13:32:56] HOME_URL="https://www.centos.org/"
[2025-10-18 13:32:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 13:32:56] 
[2025-10-18 13:32:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 13:32:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 13:32:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 13:32:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 13:32:56] 
[2025-10-18 13:32:56] 2025-10-18 20:32:26,506 | INFO     | ***************************************
[2025-10-18 13:32:56] 2025-10-18 20:32:27,009 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-18 13:32:56] 2025-10-18 20:32:27,030 | INFO     | sufficient remaining disk space (2116527587328 B)
[2025-10-18 13:32:56] 2025-10-18 20:32:27,030 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 13:32:56] 2025-10-18 20:32:27,030 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 13:32:56] 2025-10-18 20:32:27,031 | INFO     | update_server=False
[2025-10-18 13:32:56] 2025-10-18 20:32:27,031 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 13:32:56] 2025-10-18 20:32:27,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 13:32:56] 2025-10-18 20:32:27,031 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 13:32:56] 2025-10-18 20:32:27,032 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 13:32:56] 2025-10-18 20:32:27,079 | INFO     | all job control threads have been joined
[2025-10-18 13:32:56] 2025-10-18 20:32:27,374 | INFO     | all data control threads have been joined
[2025-10-18 13:32:56] 2025-10-18 20:32:27,741 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 13:32:56] 2025-10-18 20:32:27,742 | INFO     | aborting loop
[2025-10-18 13:32:56] 2025-10-18 20:32:28,037 | INFO     | [job] retrieve thread has finished
[2025-10-18 13:32:56] 2025-10-18 20:32:28,039 | INFO     | [job] queue monitor thread has finished
[2025-10-18 13:32:56] 2025-10-18 20:32:28,085 | INFO     | [job] control thread has finished
[2025-10-18 13:32:56] 2025-10-18 20:32:28,094 | INFO     | all payload control threads have been joined
[2025-10-18 13:32:56] 2025-10-18 20:32:28,293 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 13:32:56] 2025-10-18 20:32:28,360 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 13:32:56] 2025-10-18 20:32:28,380 | INFO     | [data] control thread has finished
[2025-10-18 13:32:56] 2025-10-18 20:32:28,390 | INFO     | [payload] validate_post thread has finished
[2025-10-18 13:32:56] 2025-10-18 20:32:28,747 | INFO     | [job] job monitor thread has finished
[2025-10-18 13:32:56] 2025-10-18 20:32:28,930 | INFO     | [job] validate thread has finished
[2025-10-18 13:32:56] 2025-10-18 20:32:29,028 | INFO     | [payload] failed_post thread has finished
[2025-10-18 13:32:56] 2025-10-18 20:32:29,036 | INFO     | [data] copytool_out thread has finished
[2025-10-18 13:32:56] 2025-10-18 20:32:29,100 | INFO     | [payload] control thread has finished
[2025-10-18 13:32:56] 2025-10-18 20:32:29,119 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 13:32:56] 2025-10-18 20:32:29,253 | INFO     | [data] copytool_in thread has finished
[2025-10-18 13:32:56] 2025-10-18 20:32:29,253 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 13:32:56] 2025-10-18 20:32:31,038 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 13:32:56] 2025-10-18 20:32:36,032 | INFO     | [monitor] cgroup control has ended
[2025-10-18 13:32:56] 2025-10-18 20:32:37,005 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140270153779008)>', '<ExcThread(monitor, started 140269756323584)>']
[2025-10-18 13:32:56] 2025-10-18 20:32:42,030 | INFO     | all workflow threads have been joined
[2025-10-18 13:32:56] 2025-10-18 20:32:42,031 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 13:32:56] 2025-10-18 20:32:42,031 | INFO     | traces error code: 0
[2025-10-18 13:32:56] 2025-10-18 20:32:42,032 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 13:32:56] 2025-10-18 20:32:56,590 | INFO     | PID=4070677 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 13:32:56] 2025-10-18 20:32:56,590 | INFO     | .. there are 21 such processes running
[2025-10-18 13:32:56] 2025-10-18 20:32:56,592 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 13:32:56] 2025-10-18 20:32:56,592 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 13:32:56] 2025-10-18 20:32:56,592 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 13:32:56] 2025-10-18 20:32:56,592 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 13:32:56] 2025-10-18 20:32:56,592 | CRITICAL | thread 'MainThread' is not alive
[2025-10-18 13:32:56] 2025-10-18 20:32:56,592 | INFO     | [monitor] control thread has ended
[2025-10-18 13:32:56] 2025-10-18 20:32:56,736 [wrapper] ==== pilot stdout END ====
[2025-10-18 13:32:56] 2025-10-18 20:32:56,739 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 13:32:56] 2025-10-18 20:32:56,741 [wrapper] pilotpid: 4070677
[2025-10-18 13:32:56] 2025-10-18 20:32:56,744 [wrapper] Pilot exit status: 0
[2025-10-18 13:32:56] 2025-10-18 20:32:56,757 [wrapper] pandaids: 6848042240
[2025-10-18 13:32:56] 2025-10-18 20:32:56,806 [wrapper] cleanup supervisor_pilot 4070683 4070678
[2025-10-18 13:32:56] 2025-10-18 20:32:56,810 [wrapper] Test setup, not cleaning
[2025-10-18 13:32:56] 2025-10-18 20:32:56,815 [wrapper] apfmon messages muted
[2025-10-18 13:32:56] 2025-10-18 20:32:56,818 [wrapper] ==== wrapper stdout END ====
[2025-10-18 13:32:56] 2025-10-18 20:32:56,823 [wrapper] ==== wrapper stderr END ====
[2025-10-18 13:32:56]  *** Error codes and diagnostics ***
[2025-10-18 13:32:56]     "exeErrorCode": 65,
[2025-10-18 13:32:56]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-18 13:32:56]     "pilotErrorCode": 1305,
[2025-10-18 13:32:56]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-18 13:32:56]  *** Listing of results directory ***
[2025-10-18 13:32:56] total 228648
[2025-10-18 13:32:56] -rw-r--r--. 1 boinc boinc    557409 Oct 18 11:42 pilot3.tar.gz
[2025-10-18 13:32:56] -rwx------. 1 boinc boinc     36292 Oct 18 11:44 runpilot2-wrapper.sh
[2025-10-18 13:32:56] -rw-r--r--. 1 boinc boinc      5112 Oct 18 11:44 queuedata.json
[2025-10-18 13:32:56] -rw-r--r--. 1 boinc boinc       100 Oct 18 13:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 13:32:56] -rwxr-xr-x. 1 boinc boinc      7986 Oct 18 13:29 run_atlas
[2025-10-18 13:32:56] -rw-r--r--. 1 boinc boinc       105 Oct 18 13:29 job.xml
[2025-10-18 13:32:56] -rw-r--r--. 1 boinc boinc      6589 Oct 18 13:29 init_data.xml
[2025-10-18 13:32:56] -rw-r--r--. 2 boinc boinc 230030021 Oct 18 13:29 EVNT.46771634._001962.pool.root.1
[2025-10-18 13:32:56] -rw-r--r--. 2 boinc boinc     15120 Oct 18 13:29 start_atlas.sh
[2025-10-18 13:32:56] drwxrwx--x. 2 boinc boinc      4096 Oct 18 13:29 shared
[2025-10-18 13:32:56] -rw-r--r--. 2 boinc boinc    569674 Oct 18 13:29 input.tar.gz
[2025-10-18 13:32:56] -rw-r--r--. 1 boinc boinc         0 Oct 18 13:29 boinc_lockfile
[2025-10-18 13:32:56] -rw-r--r--. 1 boinc boinc      2555 Oct 18 13:29 pandaJob.out
[2025-10-18 13:32:56] -rw-------. 1 boinc boinc    976750 Oct 18 13:29 agis_schedconf.cvmfs.json
[2025-10-18 13:32:56] -rw-------. 1 boinc boinc   1560740 Oct 18 13:29 agis_ddmendpoints.agis.ALL.json
[2025-10-18 13:32:56] drwx------. 5 boinc boinc      4096 Oct 18 13:29 pilot3
[2025-10-18 13:32:56] -rw-r--r--. 1 boinc boinc       522 Oct 18 13:30 boinc_task_state.xml
[2025-10-18 13:32:56] -rw-------. 1 boinc boinc       951 Oct 18 13:30 memory_monitor_summary.json
[2025-10-18 13:32:56] -rw-------. 1 boinc boinc     20211 Oct 18 13:30 log.46771637._046541.job.log.tgz.1
[2025-10-18 13:32:56] -rw-------. 1 boinc boinc      8376 Oct 18 13:32 heartbeat.json
[2025-10-18 13:32:56] -rw-r--r--. 1 boinc boinc        22 Oct 18 13:32 wrapper_checkpoint.txt
[2025-10-18 13:32:56] -rw-r--r--. 1 boinc boinc      8192 Oct 18 13:32 boinc_mmap_file
[2025-10-18 13:32:56] -rw-------. 1 boinc boinc        95 Oct 18 13:32 pilot_heartbeat.json
[2025-10-18 13:32:56] -rw-------. 1 boinc boinc       893 Oct 18 13:32 pilotlog.txt
[2025-10-18 13:32:56] -rw-------. 1 boinc boinc     83394 Oct 18 13:32 log.46771637._046541.job.log.1
[2025-10-18 13:32:56] -rw-------. 1 boinc boinc       188 Oct 18 13:32 output.list
[2025-10-18 13:32:56] -rw-r--r--. 1 boinc boinc       620 Oct 18 13:32 runtime_log
[2025-10-18 13:32:56] -rw-------. 1 boinc boinc    122880 Oct 18 13:32 result.tar.gz
[2025-10-18 13:32:56] -rw-r--r--. 1 boinc boinc      8528 Oct 18 13:32 runtime_log.err
[2025-10-18 13:32:56] -rw-------. 1 boinc boinc       645 Oct 18 13:32 36xKDmp5QU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJCyNDmRlseYn.diag
[2025-10-18 13:32:56] -rw-r--r--. 1 boinc boinc     21612 Oct 18 13:32 stderr.txt
[2025-10-18 13:32:56] No HITS result produced
[2025-10-18 13:32:56]  *** Contents of shared directory: ***
[2025-10-18 13:32:56] total 225340
[2025-10-18 13:32:56] -rw-r--r--. 2 boinc boinc 230030021 Oct 18 13:29 ATLAS.root_0
[2025-10-18 13:32:56] -rw-r--r--. 2 boinc boinc     15120 Oct 18 13:29 start_atlas.sh
[2025-10-18 13:32:56] -rw-r--r--. 2 boinc boinc    569674 Oct 18 13:29 input.tar.gz
[2025-10-18 13:32:56] -rw-------. 1 boinc boinc    122880 Oct 18 13:32 result.tar.gz
13:32:58 (4067017): run_atlas exited; CPU time 28.806437
13:32:58 (4067017): called boinc_finish(0)

</stderr_txt>
]]>

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