Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:06:28 (26084): wrapper (7.7.26015): starting
16:06:28 (26084): wrapper: running run_atlas (--nthreads 8)
[2025-10-18 16:06:28] Arguments: --nthreads 8
[2025-10-18 16:06:28] Threads: 8
[2025-10-18 16:06:28] Checking for CVMFS
[2025-10-18 16:06:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 16:06:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 16:06:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 16:06:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 16:06:28] 2.11.2.0 2698 17600 77300 151862 2 57 11683287 20275200 1 130560 0 9456756 99.988 586688 35804 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 16:06:28] CVMFS is ok
[2025-10-18 16:06:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 16:06:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 16:06:28] Further information can be found at the LHC@home message board.
[2025-10-18 16:06:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 16:06:28] Checking for apptainer binary...
[2025-10-18 16:06:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 16:06:28] Running /usr/bin/apptainer --version
[2025-10-18 16:06:28] apptainer version 1.3.2-1.el7
[2025-10-18 16:06:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 16:06:30] c-204-2.aglt2.org
[2025-10-18 16:06:30] apptainer works
[2025-10-18 16:06:30] Set ATHENA_PROC_NUMBER=8
[2025-10-18 16:06:30] Set ATHENA_CORE_NUMBER=8
[2025-10-18 16:06:30] Starting ATLAS job with PandaID=6850267749
[2025-10-18 16:06:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 17:42:24]  *** The last 200 lines of the pilot log: ***
[2025-10-18 17:42:24]  status=None
[2025-10-18 17:42:24]  status_code=0
[2025-10-18 17:42:24]  storage_token=
[2025-10-18 17:42:24]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6850267749/log.46808902._002849.job.log.tgz.1
[2025-10-18 17:42:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/cf/log.46808902._002849.job.log.tgz.1
[2025-10-18 17:42:24]  workdir=None
[2025-10-18 17:42:24] ]
[2025-10-18 17:42:24] 2025-10-18 21:41:45,644 | INFO     | transferring file log.46808902._002849.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6850267749/log.46808902._002849.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-18 17:42:24] 2025-10-18 21:41:45,644 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6850267749/log.46808902._002849.job.log.tgz.1 /tmp/boinchome/slots/0/log.46808902._002849.job
[2025-10-18 17:42:24] 2025-10-18 21:41:45,670 | INFO     | adding to output.list: log.46808902._002849.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/cf/log.46808902._002849.job.log.tg
[2025-10-18 17:42:24] 2025-10-18 21:41:45,671 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 17:42:24] 2025-10-18 21:41:45,671 | INFO     | summary of transferred files:
[2025-10-18 17:42:24] 2025-10-18 21:41:45,671 | INFO     |  -- lfn=log.46808902._002849.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 17:42:24] 2025-10-18 21:41:45,672 | INFO     | stage-out finished correctly
[2025-10-18 17:42:24] 2025-10-18 21:41:46,178 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 17:42:24] 2025-10-18 21:41:46,250 | INFO     | monitor loop #427: job 0:6850267749 is in state 'finished'
[2025-10-18 17:42:24] 2025-10-18 21:41:46,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 17:42:24] 2025-10-18 21:41:46,266 | INFO     | job 6850267749 has state=finished
[2025-10-18 17:42:24] 2025-10-18 21:41:46,266 | INFO     | preparing for final server update for job 6850267749 in state='finished'
[2025-10-18 17:42:24] 2025-10-18 21:41:46,267 | INFO     | this job has now completed (state=finished)
[2025-10-18 17:42:24] 2025-10-18 21:41:46,267 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 17:42:24] 2025-10-18 21:41:46,268 | INFO     | log transfer has been attempted: DONE
[2025-10-18 17:42:24] 2025-10-18 21:41:46,268 | INFO     | job 6850267749 has finished - writing final server update
[2025-10-18 17:42:24] 2025-10-18 21:41:46,268 | INFO     | total number of processed events: 400 (read)
[2025-10-18 17:42:24] 2025-10-18 21:41:46,269 | INFO     | executing command: lscpu
[2025-10-18 17:42:24] 2025-10-18 21:41:46,301 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 17:42:24] 2025-10-18 21:41:47,288 | INFO     | time since job start (5700s) is within the limit (172800.0s)
[2025-10-18 17:42:24] 2025-10-18 21:41:48,381 | INFO     | PID=29759 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 17:42:24] 2025-10-18 21:41:48,760 | INFO     | monitor loop #428: job 0:6850267749 is in state 'finished'
[2025-10-18 17:42:24] 2025-10-18 21:41:48,760 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 17:42:24] 2025-10-18 21:41:49,381 | INFO     | time since job start (5702s) is within the limit (172800.0s)
[2025-10-18 17:42:24] 2025-10-18 21:41:51,262 | INFO     | monitor loop #429: job 0:6850267749 is in state 'finished'
[2025-10-18 17:42:24] 2025-10-18 21:41:51,267 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 17:42:24] 2025-10-18 21:41:51,387 | INFO     | time since job start (5704s) is within the limit (172800.0s)
[2025-10-18 17:42:24] 2025-10-18 21:41:51,829 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-18 17:42:24] 2025-10-18 21:41:51,832 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-10-18 17:42:24] 2025-10-18 21:41:51,834 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6850267749/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 17:42:24] 2025-10-18 21:41:51,835 | INFO     | extracted standard info from prmon json
[2025-10-18 17:42:24] 2025-10-18 21:41:51,835 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 17:42:24] 2025-10-18 21:41:51,835 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 17:42:24] 2025-10-18 21:41:51,836 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 17:42:24] 2025-10-18 21:41:51,836 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 17:42:24] 2025-10-18 21:41:51,838 | INFO     | fitting pss+swap vs Time
[2025-10-18 17:42:24] 2025-10-18 21:41:51,838 | INFO     | sum of square deviations: 197203697.5
[2025-10-18 17:42:24] 2025-10-18 21:41:51,839 | INFO     | sum of deviations: 974758527.9999998
[2025-10-18 17:42:24] 2025-10-18 21:41:51,839 | INFO     | mean x: 1760820936.5
[2025-10-18 17:42:24] 2025-10-18 21:41:51,839 | INFO     | mean y: 2500351.488372093
[2025-10-18 17:42:24] 2025-10-18 21:41:51,839 | INFO     | -- intersect: -8701064773.77669
[2025-10-18 17:42:24] 2025-10-18 21:41:51,839 | INFO     | intersect: -8701064773.77669
[2025-10-18 17:42:24] 2025-10-18 21:41:51,840 | INFO     | chi2: 0.007721002939391695
[2025-10-18 17:42:24] 2025-10-18 21:41:51,840 | INFO     | -- intersect: -8701064773.77669
[2025-10-18 17:42:24] 2025-10-18 21:41:51,840 | INFO     | current memory leak: 4.94 B/s (using 86 data points, chi2=0.01)
[2025-10-18 17:42:24] 2025-10-18 21:41:51,840 | INFO     | could have reported an average CPU frequency of 1945 MHz (7 samples)
[2025-10-18 17:42:24] 2025-10-18 21:41:51,840 | INFO     | ..............................
[2025-10-18 17:42:24] 2025-10-18 21:41:51,841 | INFO     | . Timing measurements:
[2025-10-18 17:42:24] 2025-10-18 21:41:51,841 | INFO     | . get job = 0 s
[2025-10-18 17:42:24] 2025-10-18 21:41:51,841 | INFO     | . initial setup = 2 s
[2025-10-18 17:42:24] 2025-10-18 21:41:51,841 | INFO     | . payload setup = 8 s
[2025-10-18 17:42:24] 2025-10-18 21:41:51,841 | INFO     | . stage-in = 0 s
[2025-10-18 17:42:24] 2025-10-18 21:41:51,841 | INFO     | . payload execution = 5668 s
[2025-10-18 17:42:24] 2025-10-18 21:41:51,841 | INFO     | . stage-out = 0 s
[2025-10-18 17:42:24] 2025-10-18 21:41:51,841 | INFO     | . log creation = 0 s
[2025-10-18 17:42:24] 2025-10-18 21:41:51,842 | INFO     | ..............................
[2025-10-18 17:42:24] 2025-10-18 21:41:51,931 | INFO     | 
[2025-10-18 17:42:24] 2025-10-18 21:41:51,931 | INFO     | job summary report
[2025-10-18 17:42:24] 2025-10-18 21:41:51,932 | INFO     | --------------------------------------------------
[2025-10-18 17:42:24] 2025-10-18 21:41:51,932 | INFO     | PanDA job id: 6850267749
[2025-10-18 17:42:24] 2025-10-18 21:41:51,932 | INFO     | task id: 46808902
[2025-10-18 17:42:24] 2025-10-18 21:41:51,932 | INFO     | errors: (none)
[2025-10-18 17:42:24] 2025-10-18 21:41:51,932 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 17:42:24] 2025-10-18 21:41:51,933 | INFO     | pilot state: finished 
[2025-10-18 17:42:24] 2025-10-18 21:41:51,933 | INFO     | transexitcode: 0
[2025-10-18 17:42:24] 2025-10-18 21:41:51,933 | INFO     | exeerrorcode: 0
[2025-10-18 17:42:24] 2025-10-18 21:41:51,933 | INFO     | exeerrordiag: 
[2025-10-18 17:42:24] 2025-10-18 21:41:51,933 | INFO     | exitcode: 0
[2025-10-18 17:42:24] 2025-10-18 21:41:51,933 | INFO     | exitmsg: OK
[2025-10-18 17:42:24] 2025-10-18 21:41:51,934 | INFO     | cpuconsumptiontime: 41819 s
[2025-10-18 17:42:24] 2025-10-18 21:41:51,934 | INFO     | nevents: 400
[2025-10-18 17:42:24] 2025-10-18 21:41:51,934 | INFO     | neventsw: 0
[2025-10-18 17:42:24] 2025-10-18 21:41:51,934 | INFO     | pid: 3871
[2025-10-18 17:42:24] 2025-10-18 21:41:51,934 | INFO     | pgrp: 3871
[2025-10-18 17:42:24] 2025-10-18 21:41:51,935 | INFO     | corecount: 8
[2025-10-18 17:42:24] 2025-10-18 21:41:51,935 | INFO     | event service: False
[2025-10-18 17:42:24] 2025-10-18 21:41:51,935 | INFO     | sizes: {0: 2348849, 1: 2348877, 6: 2349139, 11: 2349167, 5680: 2375797, 5681: 2384979, 5687: 2385117}
[2025-10-18 17:42:24] 2025-10-18 21:41:51,935 | INFO     | --------------------------------------------------
[2025-10-18 17:42:24] 2025-10-18 21:41:51,935 | INFO     | 
[2025-10-18 17:42:24] 2025-10-18 21:41:51,935 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 17:42:24] 2025-10-18 21:41:51,963 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,964 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,964 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,964 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,964 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,964 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,965 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,965 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,965 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,965 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,965 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,966 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,966 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,966 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,966 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,966 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,966 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,966 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 17:42:24] 2025-10-18 21:41:51,967 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,967 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 17:42:24] 2025-10-18 21:41:51,967 | INFO     | job 6850267749 has completed (purged errors)
[2025-10-18 17:42:24] 2025-10-18 21:41:51,967 | INFO     | overall cleanup function is called
[2025-10-18 17:42:24] 2025-10-18 21:41:52,975 | INFO     | --- collectZombieJob: --- 10, [3871]
[2025-10-18 17:42:24] 2025-10-18 21:41:52,975 | INFO     | zombie collector waiting for pid 3871
[2025-10-18 17:42:24] 2025-10-18 21:41:52,975 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 17:42:24] 2025-10-18 21:41:52,975 | INFO     | collected zombie processes
[2025-10-18 17:42:24] 2025-10-18 21:41:52,976 | INFO     | will attempt to kill all subprocesses of pid=3871
[2025-10-18 17:42:24] 2025-10-18 21:41:53,049 | INFO     | process IDs to be killed: [3871] (in reverse order)
[2025-10-18 17:42:24] 2025-10-18 21:41:53,100 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 17:42:24] 2025-10-18 21:41:53,101 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 17:42:24] 2025-10-18 21:41:53,106 | INFO     | did not find any defunct processes belonging to 3871
[2025-10-18 17:42:24] 2025-10-18 21:41:53,108 | INFO     | did not find any defunct processes belonging to 3871
[2025-10-18 17:42:24] 2025-10-18 21:41:53,109 | INFO     | ready for new job
[2025-10-18 17:42:24] 2025-10-18 21:41:53,109 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 17:42:24] 2025-10-18 21:41:53,110 | INFO     | ***************************************
[2025-10-18 17:42:24] 2025-10-18 21:41:53,111 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 17:42:24] 2025-10-18 21:41:53,111 | INFO     | ***************************************
[2025-10-18 17:42:24] 2025-10-18 21:41:53,111 | INFO     | 
[2025-10-18 17:42:24] 2025-10-18 21:41:53,111 | INFO     | architecture information:
[2025-10-18 17:42:24] 2025-10-18 21:41:53,112 | INFO     | executing command: cat /etc/os-release
[2025-10-18 17:42:24] 2025-10-18 21:41:53,131 | INFO     | cat /etc/os-release:
[2025-10-18 17:42:24] NAME="CentOS Linux"
[2025-10-18 17:42:24] VERSION="7 (Core)"
[2025-10-18 17:42:24] ID="centos"
[2025-10-18 17:42:24] ID_LIKE="rhel fedora"
[2025-10-18 17:42:24] VERSION_ID="7"
[2025-10-18 17:42:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 17:42:24] ANSI_COLOR="0;31"
[2025-10-18 17:42:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 17:42:24] HOME_URL="https://www.centos.org/"
[2025-10-18 17:42:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 17:42:24] 
[2025-10-18 17:42:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 17:42:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 17:42:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 17:42:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 17:42:24] 
[2025-10-18 17:42:24] 2025-10-18 21:41:53,132 | INFO     | ***************************************
[2025-10-18 17:42:24] 2025-10-18 21:41:53,635 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 17:42:24] 2025-10-18 21:41:53,655 | INFO     | sufficient remaining disk space (18702401536 B)
[2025-10-18 17:42:24] 2025-10-18 21:41:53,656 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 17:42:24] 2025-10-18 21:41:53,656 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 17:42:24] 2025-10-18 21:41:53,656 | INFO     | update_server=False
[2025-10-18 17:42:24] 2025-10-18 21:41:53,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 17:42:24] 2025-10-18 21:41:53,657 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 17:42:24] 2025-10-18 21:41:53,771 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-18 17:42:24] 2025-10-18 21:41:53,771 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-18 17:42:24] 2025-10-18 21:41:53,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 17:42:24] 2025-10-18 21:41:53,771 | INFO     | will abort loop
[2025-10-18 17:42:24] 2025-10-18 21:41:53,778 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 17:42:24] 2025-10-18 21:41:54,306 | INFO     | all data control threads have been joined
[2025-10-18 17:42:24] 2025-10-18 21:41:54,616 | INFO     | all job control threads have been joined
[2025-10-18 17:42:24] 2025-10-18 21:41:54,627 | INFO     | all payload control threads have been joined
[2025-10-18 17:42:24] 2025-10-18 21:41:54,662 | INFO     | [job] retrieve thread has finished
[2025-10-18 17:42:24] 2025-10-18 21:41:54,662 | INFO     | [job] queue monitor thread has finished
[2025-10-18 17:42:24] 2025-10-18 21:41:54,777 | INFO     | [job] job monitor thread has finished
[2025-10-18 17:42:24] 2025-10-18 21:41:54,781 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 17:42:24] 2025-10-18 21:41:55,100 | INFO     | [data] copytool_in thread has finished
[2025-10-18 17:42:24] 2025-10-18 21:41:55,135 | INFO     | [job] validate thread has finished
[2025-10-18 17:42:24] 2025-10-18 21:41:55,314 | INFO     | [data] control thread has finished
[2025-10-18 17:42:24] 2025-10-18 21:41:55,349 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 17:42:24] 2025-10-18 21:41:55,464 | INFO     | [payload] validate_post thread has finished
[2025-10-18 17:42:24] 2025-10-18 21:41:55,621 | INFO     | [job] control thread has finished
[2025-10-18 17:42:24] 2025-10-18 21:41:55,628 | INFO     | [payload] control thread has finished
[2025-10-18 17:42:24] 2025-10-18 21:41:55,665 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 17:42:24] 2025-10-18 21:41:55,697 | INFO     | [payload] failed_post thread has finished
[2025-10-18 17:42:24] 2025-10-18 21:41:55,781 | INFO     | [data] copytool_out thread has finished
[2025-10-18 17:42:24] 2025-10-18 21:41:56,357 | INFO     | [monitor] cgroup control has ended
[2025-10-18 17:42:24] 2025-10-18 21:41:56,776 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 17:42:24] 2025-10-18 21:42:00,782 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 17:42:24] 2025-10-18 21:42:04,042 | INFO     | job.realtimelogging is not enabled
[2025-10-18 17:42:24] 2025-10-18 21:42:05,047 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 17:42:24] 2025-10-18 21:42:05,274 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140163676284736)>', '<ExcThread(monitor, started 140162944190208)>']
[2025-10-18 17:42:24] 2025-10-18 21:42:10,299 | INFO     | all workflow threads have been joined
[2025-10-18 17:42:24] 2025-10-18 21:42:10,300 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 17:42:24] 2025-10-18 21:42:10,300 | INFO     | traces error code: 0
[2025-10-18 17:42:24] 2025-10-18 21:42:10,301 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 17:42:24] 2025-10-18 21:42:24,573 | INFO     | PID=29759 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 17:42:24] 2025-10-18 21:42:24,574 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 17:42:24] 2025-10-18 21:42:24,574 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 17:42:24] 2025-10-18 21:42:24,574 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 17:42:24] 2025-10-18 21:42:24,574 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 17:42:24] 2025-10-18 21:42:24,575 | INFO     | [monitor] control thread has ended
[2025-10-18 17:42:24] 2025-10-18 21:42:24,695 [wrapper] ==== pilot stdout END ====
[2025-10-18 17:42:24] 2025-10-18 21:42:24,700 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 17:42:24] 2025-10-18 21:42:24,704 [wrapper] pilotpid: 29759
[2025-10-18 17:42:24] 2025-10-18 21:42:24,709 [wrapper] Pilot exit status: 0
[2025-10-18 17:42:24] 2025-10-18 21:42:24,726 [wrapper] pandaids: 6850267749
[2025-10-18 17:42:24] 2025-10-18 21:42:24,768 [wrapper] cleanup supervisor_pilot 30477 29760
[2025-10-18 17:42:24] 2025-10-18 21:42:24,773 [wrapper] Test setup, not cleaning
[2025-10-18 17:42:24] 2025-10-18 21:42:24,778 [wrapper] apfmon messages muted
[2025-10-18 17:42:24] 2025-10-18 21:42:24,783 [wrapper] ==== wrapper stdout END ====
[2025-10-18 17:42:24] 2025-10-18 21:42:24,788 [wrapper] ==== wrapper stderr END ====
[2025-10-18 17:42:24]  *** Error codes and diagnostics ***
[2025-10-18 17:42:24]     "exeErrorCode": 0,
[2025-10-18 17:42:24]     "exeErrorDiag": "",
[2025-10-18 17:42:24]     "pilotErrorCode": 0,
[2025-10-18 17:42:24]     "pilotErrorDiag": "",
[2025-10-18 17:42:24]  *** Listing of results directory ***
[2025-10-18 17:42:24] total 332576
[2025-10-18 17:42:24] -rw-r--r-- 1 boincer umatlas    557409 Oct 18 11:20 pilot3.tar.gz
[2025-10-18 17:42:24] -rwx------ 1 boincer umatlas     36292 Oct 18 11:22 runpilot2-wrapper.sh
[2025-10-18 17:42:24] -rw-r--r-- 1 boincer umatlas      5112 Oct 18 11:22 queuedata.json
[2025-10-18 17:42:24] -rw-r--r-- 1 boincer umatlas       100 Oct 18 16:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 17:42:24] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 16:06 run_atlas
[2025-10-18 17:42:24] -rw-r--r-- 1 boincer umatlas       105 Oct 18 16:06 job.xml
[2025-10-18 17:42:24] -rw-r--r-- 2 boincer umatlas 188778555 Oct 18 16:06 EVNT.46808900._000116.pool.root.1
[2025-10-18 17:42:24] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 16:06 start_atlas.sh
[2025-10-18 17:42:24] drwxrwx--x 2 boincer umatlas      4096 Oct 18 16:06 shared
[2025-10-18 17:42:24] -rw-r--r-- 2 boincer umatlas    569672 Oct 18 16:06 input.tar.gz
[2025-10-18 17:42:24] -rw-r--r-- 1 boincer umatlas         0 Oct 18 16:06 boinc_lockfile
[2025-10-18 17:42:24] -rw-r--r-- 1 boincer umatlas      2503 Oct 18 16:06 pandaJob.out
[2025-10-18 17:42:24] -rw------- 1 boincer umatlas    976734 Oct 18 16:06 agis_schedconf.cvmfs.json
[2025-10-18 17:42:24] -rw------- 1 boincer umatlas   1560740 Oct 18 16:06 agis_ddmendpoints.agis.ALL.json
[2025-10-18 17:42:24] drwx------ 5 boincer umatlas      4096 Oct 18 16:06 pilot3
[2025-10-18 17:42:24] -rw-r--r-- 1 boincer umatlas      5909 Oct 18 17:37 init_data.xml
[2025-10-18 17:42:24] -rw------- 1 boincer umatlas 145555217 Oct 18 17:41 HITS.46808902._002849.pool.root.1
[2025-10-18 17:42:24] -rw-r--r-- 1 boincer umatlas       529 Oct 18 17:41 boinc_task_state.xml
[2025-10-18 17:42:24] -rw------- 1 boincer umatlas      1047 Oct 18 17:41 memory_monitor_summary.json
[2025-10-18 17:42:24] -rw------- 1 boincer umatlas    347951 Oct 18 17:41 log.46808902._002849.job.log.tgz.1
[2025-10-18 17:42:24] -rw------- 1 boincer umatlas      7833 Oct 18 17:41 heartbeat.json
[2025-10-18 17:42:24] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 17:42 boinc_mmap_file
[2025-10-18 17:42:24] -rw-r--r-- 1 boincer umatlas        27 Oct 18 17:42 wrapper_checkpoint.txt
[2025-10-18 17:42:24] -rw------- 1 boincer umatlas        95 Oct 18 17:42 pilot_heartbeat.json
[2025-10-18 17:42:24] -rw------- 1 boincer umatlas       745 Oct 18 17:42 pilotlog.txt
[2025-10-18 17:42:24] -rw------- 1 boincer umatlas    818506 Oct 18 17:42 log.46808902._002849.job.log.1
[2025-10-18 17:42:24] -rw------- 1 boincer umatlas       357 Oct 18 17:42 output.list
[2025-10-18 17:42:24] -rw-r--r-- 1 boincer umatlas       620 Oct 18 17:42 runtime_log
[2025-10-18 17:42:24] -rw------- 1 boincer umatlas   1187840 Oct 18 17:42 result.tar.gz
[2025-10-18 17:42:24] -rw------- 1 boincer umatlas       657 Oct 18 17:42 TQ5KDmfwNU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmIScMDmEN8RCn.diag
[2025-10-18 17:42:24] -rw-r--r-- 1 boincer umatlas      8698 Oct 18 17:42 runtime_log.err
[2025-10-18 17:42:24] -rw-r--r-- 1 boincer umatlas     22036 Oct 18 17:42 stderr.txt
[2025-10-18 17:42:24] HITS file was successfully produced:
[2025-10-18 17:42:24] -rw------- 1 boincer umatlas 145555217 Oct 18 17:41 shared/HITS.pool.root.1
[2025-10-18 17:42:24]  *** Contents of shared directory: ***
[2025-10-18 17:42:24] total 328236
[2025-10-18 17:42:24] -rw-r--r-- 2 boincer umatlas 188778555 Oct 18 16:06 ATLAS.root_0
[2025-10-18 17:42:24] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 16:06 start_atlas.sh
[2025-10-18 17:42:24] -rw-r--r-- 2 boincer umatlas    569672 Oct 18 16:06 input.tar.gz
[2025-10-18 17:42:24] -rw------- 1 boincer umatlas 145555217 Oct 18 17:41 HITS.pool.root.1
[2025-10-18 17:42:24] -rw------- 1 boincer umatlas   1187840 Oct 18 17:42 result.tar.gz
17:42:26 (26084): run_atlas exited; CPU time 41809.397578
17:42:26 (26084): called boinc_finish(0)

</stderr_txt>
]]>

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