Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:43:37 (2449594): wrapper (7.7.26015): starting
10:43:37 (2449594): wrapper: running run_atlas (--nthreads 4)
[2025-10-19 10:43:37] Arguments: --nthreads 4
[2025-10-19 10:43:37] Threads: 4
[2025-10-19 10:43:37] Checking for CVMFS
[2025-10-19 10:43:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 10:43:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 10:43:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 10:43:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 10:43:37] 2.9.2.0 279843 4571 94556 151880 0 57 35454915 36864000 0 130560 0 3859501 99.989 189148 1819 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-19 10:43:37] CVMFS is ok
[2025-10-19 10:43:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 10:43:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 10:43:37] Further information can be found at the LHC@home message board.
[2025-10-19 10:43:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 10:43:37] Checking for apptainer binary...
[2025-10-19 10:43:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 10:43:37] Running /usr/bin/apptainer --version
[2025-10-19 10:43:37] apptainer version 1.4.1-1.1
[2025-10-19 10:43:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 10:43:37] atlasA237
[2025-10-19 10:43:37] apptainer works
[2025-10-19 10:43:38] Set ATHENA_PROC_NUMBER=4
[2025-10-19 10:43:38] Set ATHENA_CORE_NUMBER=4
[2025-10-19 10:43:38] Starting ATLAS job with PandaID=6848033939
[2025-10-19 10:43:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 12:00:56]  *** The last 200 lines of the pilot log: ***
[2025-10-19 12:00:56] 2025-10-19 09:59:53,894 | INFO     | architecture information:
[2025-10-19 12:00:56] 2025-10-19 09:59:53,894 | INFO     | executing command: cat /etc/os-release
[2025-10-19 12:00:56] 2025-10-19 09:59:53,908 | INFO     | cat /etc/os-release:
[2025-10-19 12:00:56] NAME="CentOS Linux"
[2025-10-19 12:00:56] VERSION="7 (Core)"
[2025-10-19 12:00:56] ID="centos"
[2025-10-19 12:00:56] ID_LIKE="rhel fedora"
[2025-10-19 12:00:56] VERSION_ID="7"
[2025-10-19 12:00:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 12:00:56] ANSI_COLOR="0;31"
[2025-10-19 12:00:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 12:00:56] HOME_URL="https://www.centos.org/"
[2025-10-19 12:00:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 12:00:56] 
[2025-10-19 12:00:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 12:00:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 12:00:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 12:00:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 12:00:56] 
[2025-10-19 12:00:56] 2025-10-19 09:59:53,908 | INFO     | ***************************************
[2025-10-19 12:00:56] 2025-10-19 09:59:54,411 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-19 12:00:56] 2025-10-19 09:59:54,426 | INFO     | sufficient remaining disk space (325550342144 B)
[2025-10-19 12:00:56] 2025-10-19 09:59:54,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 12:00:56] 2025-10-19 09:59:54,427 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 12:00:56] 2025-10-19 09:59:54,427 | INFO     | update_server=False
[2025-10-19 12:00:56] 2025-10-19 09:59:54,427 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 12:00:56] 2025-10-19 09:59:54,427 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 12:00:56] 2025-10-19 09:59:54,725 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 12:00:56] 2025-10-19 09:59:54,812 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-19 12:00:56] 2025-10-19 09:59:54,813 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-19 12:00:56] 2025-10-19 09:59:54,813 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 12:00:56] 2025-10-19 09:59:54,813 | INFO     | will abort loop
[2025-10-19 12:00:56] 2025-10-19 09:59:55,432 | INFO     | [job] retrieve thread has finished
[2025-10-19 12:00:56] 2025-10-19 09:59:55,455 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 12:00:56] 2025-10-19 09:59:55,475 | INFO     | all job control threads have been joined
[2025-10-19 12:00:56] 2025-10-19 09:59:55,490 | INFO     | all data control threads have been joined
[2025-10-19 12:00:56] 2025-10-19 09:59:55,498 | INFO     | [data] copytool_in thread has finished
[2025-10-19 12:00:56] 2025-10-19 09:59:55,766 | INFO     | [payload] failed_post thread has finished
[2025-10-19 12:00:56] 2025-10-19 09:59:55,818 | INFO     | [job] job monitor thread has finished
[2025-10-19 12:00:56] 2025-10-19 09:59:55,868 | INFO     | all payload control threads have been joined
[2025-10-19 12:00:56] 2025-10-19 09:59:56,130 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 12:00:56] 2025-10-19 09:59:56,433 | INFO     | [data] copytool_out thread has finished
[2025-10-19 12:00:56] 2025-10-19 09:59:56,481 | INFO     | [job] control thread has finished
[2025-10-19 12:00:56] 2025-10-19 09:59:56,495 | INFO     | [data] control thread has finished
[2025-10-19 12:00:56] 2025-10-19 09:59:56,670 | INFO     | [payload] validate_post thread has finished
[2025-10-19 12:00:56] 2025-10-19 09:59:56,765 | INFO     | [job] validate thread has finished
[2025-10-19 12:00:56] 2025-10-19 09:59:56,874 | INFO     | [payload] control thread has finished
[2025-10-19 12:00:56] 2025-10-19 09:59:56,890 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 12:00:56] 2025-10-19 09:59:57,346 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 12:00:56] 2025-10-19 09:59:58,351 | INFO     | [job] queue monitor thread has finished
[2025-10-19 12:00:56] 2025-10-19 09:59:58,732 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 12:00:56] 2025-10-19 10:00:05,300 | INFO     | job.realtimelogging is not enabled
[2025-10-19 12:00:56] 2025-10-19 10:00:06,305 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 12:00:56] 2025-10-19 10:00:24,223 | INFO     | PID=2453402 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-19 12:00:56] 2025-10-19 10:00:24,223 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 12:00:56] 2025-10-19 10:00:24,224 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 12:00:56] 2025-10-19 10:00:24,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 12:00:56] 2025-10-19 10:00:51,031 | INFO     | [monitor] cgroup control has ended
[2025-10-19 12:00:56] 2025-10-19 10:00:51,742 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140019781121856)>', '<ExcThread(monitor, started 140019146680064)>']
[2025-10-19 12:00:56] 2025-10-19 10:00:52,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 12:00:56] 2025-10-19 10:00:52,362 | INFO     | [monitor] control thread has ended
[2025-10-19 12:00:56] 2025-10-19 10:00:56,761 | INFO     | all workflow threads have been joined
[2025-10-19 12:00:56] 2025-10-19 10:00:56,761 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 12:00:56] 2025-10-19 10:00:56,761 | INFO     | traces error code: 0
[2025-10-19 12:00:56] 2025-10-19 10:00:56,761 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 12:00:56] 2025-10-19 10:00:56,831 [wrapper] ==== pilot stdout END ====
[2025-10-19 12:00:56] 2025-10-19 10:00:56,835 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 12:00:56] 2025-10-19 10:00:56,838 [wrapper] pilotpid: 2453402
[2025-10-19 12:00:56] 2025-10-19 10:00:56,842 [wrapper] Pilot exit status: 0
[2025-10-19 12:00:56] 2025-10-19 10:00:56,852 [wrapper] pandaids: 6848033939
[2025-10-19 12:00:56] 2025-10-19 10:00:56,880 [wrapper] cleanup supervisor_pilot 2483936 2453403
[2025-10-19 12:00:56] 2025-10-19 10:00:56,884 [wrapper] Test setup, not cleaning
[2025-10-19 12:00:56] 2025-10-19 10:00:56,887 [wrapper] apfmon messages muted
[2025-10-19 12:00:56] 2025-10-19 10:00:56,891 [wrapper] ==== wrapper stdout END ====
[2025-10-19 12:00:56] 2025-10-19 10:00:56,894 [wrapper] ==== wrapper stderr END ====
[2025-10-19 12:00:56]  *** Error codes and diagnostics ***
[2025-10-19 12:00:56]     "exeErrorCode": 0,
[2025-10-19 12:00:56]     "exeErrorDiag": "",
[2025-10-19 12:00:56]     "pilotErrorCode": 0,
[2025-10-19 12:00:56]     "pilotErrorDiag": "",
[2025-10-19 12:00:56]  *** Listing of results directory ***
[2025-10-19 12:00:56] total 425624
[2025-10-19 12:00:56] -rw-r--r-- 1 boinc boinc    557409 Oct 18 12:41 pilot3.tar.gz
[2025-10-19 12:00:56] -rwx------ 1 boinc boinc     36292 Oct 18 13:03 runpilot2-wrapper.sh
[2025-10-19 12:00:56] -rw-r--r-- 1 boinc boinc      5112 Oct 18 13:03 queuedata.json
[2025-10-19 12:00:56] -rw-r--r-- 1 boinc boinc       100 Oct 19 10:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 12:00:56] -rwxr-xr-x 1 boinc boinc      7986 Oct 19 10:43 run_atlas
[2025-10-19 12:00:56] -rw-r--r-- 1 boinc boinc       105 Oct 19 10:43 job.xml
[2025-10-19 12:00:56] -rw-r--r-- 2 boinc boinc 225635655 Oct 19 10:43 EVNT.46771634._001785.pool.root.1
[2025-10-19 12:00:56] -rw-r--r-- 2 boinc boinc    569676 Oct 19 10:43 input.tar.gz
[2025-10-19 12:00:56] -rw-r--r-- 2 boinc boinc     15120 Oct 19 10:43 start_atlas.sh
[2025-10-19 12:00:56] drwxrwx--x 2 boinc boinc      4096 Oct 19 10:43 shared
[2025-10-19 12:00:56] -rw-r--r-- 1 boinc boinc         0 Oct 19 10:43 boinc_setup_complete
[2025-10-19 12:00:56] -rw-r--r-- 1 boinc boinc      6370 Oct 19 10:43 init_data.xml
[2025-10-19 12:00:56] -rw-r--r-- 1 boinc boinc         0 Oct 19 10:43 boinc_lockfile
[2025-10-19 12:00:56] -rw-r--r-- 1 boinc boinc      2558 Oct 19 10:43 pandaJob.out
[2025-10-19 12:00:56] -rw------- 1 boinc boinc    976750 Oct 19 10:43 agis_schedconf.cvmfs.json
[2025-10-19 12:00:56] -rw------- 1 boinc boinc   1560740 Oct 19 10:43 agis_ddmendpoints.agis.ALL.json
[2025-10-19 12:00:56] drwx------ 5 boinc boinc      4096 Oct 19 10:43 pilot3
[2025-10-19 12:00:56] -rw------- 1 boinc boinc 204447356 Oct 19 11:59 HITS.46771637._042172.pool.root.1
[2025-10-19 12:00:56] -rw-r--r-- 1 boinc boinc       529 Oct 19 11:59 boinc_task_state.xml
[2025-10-19 12:00:56] -rw------- 1 boinc boinc      1022 Oct 19 11:59 memory_monitor_summary.json
[2025-10-19 12:00:56] -rw------- 1 boinc boinc    255665 Oct 19 11:59 log.46771637._042172.job.log.tgz.1
[2025-10-19 12:00:56] -rw------- 1 boinc boinc      7769 Oct 19 11:59 heartbeat.json
[2025-10-19 12:00:56] -rw------- 1 boinc boinc        95 Oct 19 12:00 pilot_heartbeat.json
[2025-10-19 12:00:56] -rw-r--r-- 1 boinc boinc      8192 Oct 19 12:00 boinc_mmap_file
[2025-10-19 12:00:56] -rw-r--r-- 1 boinc boinc        27 Oct 19 12:00 wrapper_checkpoint.txt
[2025-10-19 12:00:56] -rw------- 1 boinc boinc      5010 Oct 19 12:00 pilotlog.txt
[2025-10-19 12:00:56] -rw------- 1 boinc boinc    672588 Oct 19 12:00 log.46771637._042172.job.log.1
[2025-10-19 12:00:56] -rw------- 1 boinc boinc       357 Oct 19 12:00 output.list
[2025-10-19 12:00:56] -rw-r--r-- 1 boinc boinc       620 Oct 19 12:00 runtime_log
[2025-10-19 12:00:56] -rw------- 1 boinc boinc    952320 Oct 19 12:00 result.tar.gz
[2025-10-19 12:00:56] -rw-r--r-- 1 boinc boinc      8792 Oct 19 12:00 runtime_log.err
[2025-10-19 12:00:56] -rw------- 1 boinc boinc       661 Oct 19 12:00 4ZWKDmatJU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmj3bMDmgbeUDo.diag
[2025-10-19 12:00:56] -rw-r--r-- 1 boinc boinc      9296 Oct 19 12:00 stderr.txt
[2025-10-19 12:00:56] HITS file was successfully produced:
[2025-10-19 12:00:56] -rw------- 1 boinc boinc 204447356 Oct 19 11:59 shared/HITS.pool.root.1
[2025-10-19 12:00:56]  *** Contents of shared directory: ***
[2025-10-19 12:00:56] total 421520
[2025-10-19 12:00:56] -rw-r--r-- 2 boinc boinc 225635655 Oct 19 10:43 ATLAS.root_0
[2025-10-19 12:00:56] -rw-r--r-- 2 boinc boinc    569676 Oct 19 10:43 input.tar.gz
[2025-10-19 12:00:56] -rw-r--r-- 2 boinc boinc     15120 Oct 19 10:43 start_atlas.sh
[2025-10-19 12:00:56] -rw------- 1 boinc boinc 204447356 Oct 19 11:59 HITS.pool.root.1
[2025-10-19 12:00:56] -rw------- 1 boinc boinc    952320 Oct 19 12:00 result.tar.gz
12:00:58 (2449594): run_atlas exited; CPU time 17141.834304
12:00:58 (2449594): called boinc_finish(0)

</stderr_txt>
]]>

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