Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:28:54 (1680961): wrapper (7.7.26015): starting
08:28:54 (1680961): wrapper: running run_atlas (--nthreads 3)
[2025-10-19 08:28:54] Arguments: --nthreads 3
[2025-10-19 08:28:54] Threads: 3
[2025-10-19 08:28:54] Checking for CVMFS
[2025-10-19 08:28:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 08:28:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 08:28:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 08:28:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 08:28:54] 2.9.2.0 436543 4519 71948 151878 3 56 29963944 36864001 0 130560 0 3254505 99.990 163394 2434 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-19 08:28:54] CVMFS is ok
[2025-10-19 08:28:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 08:28:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 08:28:54] Further information can be found at the LHC@home message board.
[2025-10-19 08:28:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 08:28:54] Checking for apptainer binary...
[2025-10-19 08:28:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 08:28:54] Running /usr/bin/apptainer --version
[2025-10-19 08:28:55] apptainer version 1.4.1-1.1
[2025-10-19 08:28:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 08:28:55] cosA133a
[2025-10-19 08:28:55] apptainer works
[2025-10-19 08:28:55] Set ATHENA_PROC_NUMBER=3
[2025-10-19 08:28:55] Set ATHENA_CORE_NUMBER=3
[2025-10-19 08:28:55] Starting ATLAS job with PandaID=6848037267
[2025-10-19 08:28:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 10:11:20]  *** The last 200 lines of the pilot log: ***
[2025-10-19 10:11:20]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6848037267/log.46771637._043775.job.log.tgz.1
[2025-10-19 10:11:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/34/log.46771637._043775.job.log.tgz.1
[2025-10-19 10:11:20]  workdir=None
[2025-10-19 10:11:20] ]
[2025-10-19 10:11:20] 2025-10-19 08:10:13,136 | INFO     | transferring file log.46771637._043775.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6848037267/log.46771637._043775.job.log.tgz.1 to /local/data/boinc/
[2025-10-19 10:11:20] 2025-10-19 08:10:13,136 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6848037267/log.46771637._043775.job.log.tgz.1 /local/data/boinc/slots/0/log.46771637._0437
[2025-10-19 10:11:20] 2025-10-19 08:10:13,148 | INFO     | adding to output.list: log.46771637._043775.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/34/log.46771637._043775.job.log.tg
[2025-10-19 10:11:20] 2025-10-19 08:10:13,148 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-19 10:11:20] 2025-10-19 08:10:13,148 | INFO     | summary of transferred files:
[2025-10-19 10:11:20] 2025-10-19 08:10:13,149 | INFO     |  -- lfn=log.46771637._043775.job.log.tgz.1, status_code=0, status=transferred
[2025-10-19 10:11:20] 2025-10-19 08:10:13,149 | INFO     | stage-out finished correctly
[2025-10-19 10:11:20] 2025-10-19 08:10:13,179 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-19 10:11:20] 2025-10-19 08:10:13,681 | INFO     | time since job start (6068s) is within the limit (172800.0s)
[2025-10-19 10:11:20] 2025-10-19 08:10:14,812 | INFO     | monitor loop #468: job 0:6848037267 is in state 'finished'
[2025-10-19 10:11:20] 2025-10-19 08:10:14,813 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 10:11:20] 2025-10-19 08:10:15,687 | INFO     | time since job start (6070s) is within the limit (172800.0s)
[2025-10-19 10:11:20] 2025-10-19 08:10:15,874 | INFO     | job 6848037267 has state=finished
[2025-10-19 10:11:20] 2025-10-19 08:10:15,874 | INFO     | preparing for final server update for job 6848037267 in state='finished'
[2025-10-19 10:11:20] 2025-10-19 08:10:15,875 | INFO     | this job has now completed (state=finished)
[2025-10-19 10:11:20] 2025-10-19 08:10:15,875 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-19 10:11:20] 2025-10-19 08:10:15,876 | INFO     | log transfer has been attempted: DONE
[2025-10-19 10:11:20] 2025-10-19 08:10:15,876 | INFO     | job 6848037267 has finished - writing final server update
[2025-10-19 10:11:20] 2025-10-19 08:10:15,876 | INFO     | total number of processed events: 400 (read)
[2025-10-19 10:11:20] 2025-10-19 08:10:15,878 | INFO     | executing command: lscpu
[2025-10-19 10:11:20] 2025-10-19 08:10:15,894 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-19 10:11:20] 2025-10-19 08:10:17,316 | INFO     | monitor loop #469: job 0:6848037267 is in state 'finished'
[2025-10-19 10:11:20] 2025-10-19 08:10:17,316 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 10:11:20] 2025-10-19 08:10:17,693 | INFO     | time since job start (6072s) is within the limit (172800.0s)
[2025-10-19 10:11:20] 2025-10-19 08:10:19,699 | INFO     | time since job start (6074s) is within the limit (172800.0s)
[2025-10-19 10:11:20] 2025-10-19 08:10:19,819 | INFO     | monitor loop #470: job 0:6848037267 is in state 'finished'
[2025-10-19 10:11:20] 2025-10-19 08:10:19,819 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 10:11:20] 2025-10-19 08:10:21,704 | INFO     | time since job start (6076s) is within the limit (172800.0s)
[2025-10-19 10:11:20] 2025-10-19 08:10:22,322 | INFO     | monitor loop #471: job 0:6848037267 is in state 'finished'
[2025-10-19 10:11:20] 2025-10-19 08:10:22,323 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 10:11:20] 2025-10-19 08:10:22,714 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-19 10:11:20] 2025-10-19 08:10:22,715 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4352.01
[2025-10-19 10:11:20] 2025-10-19 08:10:22,716 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6848037267/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 10:11:20] 2025-10-19 08:10:22,717 | INFO     | extracted standard info from prmon json
[2025-10-19 10:11:20] 2025-10-19 08:10:22,717 | INFO     | extracted standard memory fields from prmon json
[2025-10-19 10:11:20] 2025-10-19 08:10:22,717 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-19 10:11:20] 2025-10-19 08:10:22,717 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-19 10:11:20] 2025-10-19 08:10:22,717 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-19 10:11:20] 2025-10-19 08:10:22,718 | INFO     | fitting pss+swap vs Time
[2025-10-19 10:11:20] 2025-10-19 08:10:22,718 | INFO     | sum of square deviations: 241429643.0
[2025-10-19 10:11:20] 2025-10-19 08:10:22,718 | INFO     | sum of deviations: -18410953388.0
[2025-10-19 10:11:20] 2025-10-19 08:10:22,718 | INFO     | mean x: 1760858453.5
[2025-10-19 10:11:20] 2025-10-19 08:10:22,718 | INFO     | mean y: 2499298.1304347827
[2025-10-19 10:11:20] 2025-10-19 08:10:22,718 | INFO     | -- intersect: 134282128375.22047
[2025-10-19 10:11:20] 2025-10-19 08:10:22,718 | INFO     | intersect: 134282128375.22047
[2025-10-19 10:11:20] 2025-10-19 08:10:22,718 | INFO     | chi2: 0.09781841382007833
[2025-10-19 10:11:20] 2025-10-19 08:10:22,718 | INFO     | -- intersect: 134282128375.22047
[2025-10-19 10:11:20] 2025-10-19 08:10:22,719 | INFO     | current memory leak: -76.26 B/s (using 92 data points, chi2=0.10)
[2025-10-19 10:11:20] 2025-10-19 08:10:22,719 | INFO     | could have reported an average CPU frequency of 4322 MHz (7 samples)
[2025-10-19 10:11:20] 2025-10-19 08:10:22,719 | INFO     | ..............................
[2025-10-19 10:11:20] 2025-10-19 08:10:22,719 | INFO     | . Timing measurements:
[2025-10-19 10:11:20] 2025-10-19 08:10:22,719 | INFO     | . get job = 0 s
[2025-10-19 10:11:20] 2025-10-19 08:10:22,719 | INFO     | . initial setup = 1 s
[2025-10-19 10:11:20] 2025-10-19 08:10:22,719 | INFO     | . payload setup = 6 s
[2025-10-19 10:11:20] 2025-10-19 08:10:22,719 | INFO     | . stage-in = 0 s
[2025-10-19 10:11:20] 2025-10-19 08:10:22,719 | INFO     | . payload execution = 6039 s
[2025-10-19 10:11:20] 2025-10-19 08:10:22,719 | INFO     | . stage-out = 0 s
[2025-10-19 10:11:20] 2025-10-19 08:10:22,719 | INFO     | . log creation = 0 s
[2025-10-19 10:11:20] 2025-10-19 08:10:22,719 | INFO     | ..............................
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | 
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | job summary report
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | --------------------------------------------------
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | PanDA job id: 6848037267
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | task id: 46771637
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | errors: (none)
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | pilot state: finished 
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | transexitcode: 0
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | exeerrorcode: 0
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | exeerrordiag: 
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | exitcode: 0
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | exitmsg: OK
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | cpuconsumptiontime: 17462 s
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | nevents: 400
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | neventsw: 0
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | pid: 1691145
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | pgrp: 1691145
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | corecount: 3
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | event service: False
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | sizes: {0: 2348761, 1: 2348960, 7: 2349222, 11: 2349250, 6049: 2376122, 6050: 2385310, 6059: 2385448}
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | --------------------------------------------------
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | 
[2025-10-19 10:11:20] 2025-10-19 08:10:22,750 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-19 10:11:20] 2025-10-19 08:10:22,762 | INFO     | job 6848037267 has completed (purged errors)
[2025-10-19 10:11:20] 2025-10-19 08:10:22,763 | INFO     | overall cleanup function is called
[2025-10-19 10:11:20] 2025-10-19 08:10:23,769 | INFO     | --- collectZombieJob: --- 10, [1691145]
[2025-10-19 10:11:20] 2025-10-19 08:10:23,770 | INFO     | zombie collector waiting for pid 1691145
[2025-10-19 10:11:20] 2025-10-19 08:10:23,770 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-19 10:11:20] 2025-10-19 08:10:23,770 | INFO     | collected zombie processes
[2025-10-19 10:11:20] 2025-10-19 08:10:23,771 | INFO     | will attempt to kill all subprocesses of pid=1691145
[2025-10-19 10:11:20] 2025-10-19 08:10:23,810 | INFO     | process IDs to be killed: [1691145] (in reverse order)
[2025-10-19 10:11:20] 2025-10-19 08:10:23,834 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 10:11:20] 2025-10-19 08:10:23,834 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 10:11:20] 2025-10-19 08:10:23,835 | INFO     | did not find any defunct processes belonging to 1691145
[2025-10-19 10:11:20] 2025-10-19 08:10:23,836 | INFO     | did not find any defunct processes belonging to 1691145
[2025-10-19 10:11:20] 2025-10-19 08:10:23,836 | INFO     | ready for new job
[2025-10-19 10:11:20] 2025-10-19 08:10:23,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 10:11:20] 2025-10-19 08:10:23,837 | INFO     | ***************************************
[2025-10-19 10:11:20] 2025-10-19 08:10:23,837 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 10:11:20] 2025-10-19 08:10:23,837 | INFO     | ***************************************
[2025-10-19 10:11:20] 2025-10-19 08:10:23,837 | INFO     | 
[2025-10-19 10:11:20] 2025-10-19 08:10:23,837 | INFO     | architecture information:
[2025-10-19 10:11:20] 2025-10-19 08:10:23,837 | INFO     | executing command: cat /etc/os-release
[2025-10-19 10:11:20] 2025-10-19 08:10:23,847 | INFO     | cat /etc/os-release:
[2025-10-19 10:11:20] NAME="CentOS Linux"
[2025-10-19 10:11:20] VERSION="7 (Core)"
[2025-10-19 10:11:20] ID="centos"
[2025-10-19 10:11:20] ID_LIKE="rhel fedora"
[2025-10-19 10:11:20] VERSION_ID="7"
[2025-10-19 10:11:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 10:11:20] ANSI_COLOR="0;31"
[2025-10-19 10:11:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 10:11:20] HOME_URL="https://www.centos.org/"
[2025-10-19 10:11:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 10:11:20] 
[2025-10-19 10:11:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 10:11:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 10:11:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 10:11:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 10:11:20] 
[2025-10-19 10:11:20] 2025-10-19 08:10:23,847 | INFO     | ***************************************
[2025-10-19 10:11:20] 2025-10-19 08:10:24,351 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-19 10:11:20] 2025-10-19 08:10:24,364 | INFO     | sufficient remaining disk space (331190632448 B)
[2025-10-19 10:11:20] 2025-10-19 08:10:24,364 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 10:11:20] 2025-10-19 08:10:24,364 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 10:11:20] 2025-10-19 08:10:24,364 | INFO     | update_server=False
[2025-10-19 10:11:20] 2025-10-19 08:10:24,364 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 10:11:20] 2025-10-19 08:10:24,364 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 10:11:20] 2025-10-19 08:10:24,364 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 10:11:20] 2025-10-19 08:10:24,365 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 10:11:20] 2025-10-19 08:10:24,400 | INFO     | all job control threads have been joined
[2025-10-19 10:11:20] 2025-10-19 08:10:24,760 | INFO     | all data control threads have been joined
[2025-10-19 10:11:20] 2025-10-19 08:10:24,825 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-19 10:11:20] 2025-10-19 08:10:24,826 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-19 10:11:20] 2025-10-19 08:10:24,826 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 10:11:20] 2025-10-19 08:10:24,826 | INFO     | will abort loop
[2025-10-19 10:11:20] 2025-10-19 08:10:25,062 | INFO     | all payload control threads have been joined
[2025-10-19 10:11:20] 2025-10-19 08:10:25,370 | INFO     | [job] queue monitor thread has finished
[2025-10-19 10:11:20] 2025-10-19 08:10:25,370 | INFO     | [job] retrieve thread has finished
[2025-10-19 10:11:20] 2025-10-19 08:10:25,406 | INFO     | [job] control thread has finished
[2025-10-19 10:11:20] 2025-10-19 08:10:25,766 | INFO     | [data] control thread has finished
[2025-10-19 10:11:20] 2025-10-19 08:10:25,787 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 10:11:20] 2025-10-19 08:10:25,788 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 10:11:20] 2025-10-19 08:10:25,832 | INFO     | [job] job monitor thread has finished
[2025-10-19 10:11:20] 2025-10-19 08:10:25,907 | INFO     | [job] validate thread has finished
[2025-10-19 10:11:20] 2025-10-19 08:10:26,004 | INFO     | [payload] validate_post thread has finished
[2025-10-19 10:11:20] 2025-10-19 08:10:26,068 | INFO     | [payload] control thread has finished
[2025-10-19 10:11:20] 2025-10-19 08:10:26,223 | INFO     | [data] copytool_in thread has finished
[2025-10-19 10:11:20] 2025-10-19 08:10:26,371 | INFO     | [data] copytool_out thread has finished
[2025-10-19 10:11:20] 2025-10-19 08:10:26,671 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 10:11:20] 2025-10-19 08:10:26,776 | INFO     | [payload] failed_post thread has finished
[2025-10-19 10:11:20] 2025-10-19 08:10:28,371 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 10:11:20] 2025-10-19 08:10:34,515 | INFO     | job.realtimelogging is not enabled
[2025-10-19 10:11:20] 2025-10-19 08:10:35,521 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 10:11:20] 2025-10-19 08:10:54,814 | INFO     | PID=1684692 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-19 10:11:20] 2025-10-19 08:10:54,814 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 10:11:20] 2025-10-19 08:10:54,815 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 10:11:20] 2025-10-19 08:10:54,815 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 10:11:20] 2025-10-19 08:11:14,930 | INFO     | [monitor] cgroup control has ended
[2025-10-19 10:11:20] 2025-10-19 08:11:15,329 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139803448612672)>', '<ExcThread(monitor, started 139802519267072)>']
[2025-10-19 10:11:20] 2025-10-19 08:11:15,923 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 10:11:20] 2025-10-19 08:11:15,923 | INFO     | [monitor] control thread has ended
[2025-10-19 10:11:20] 2025-10-19 08:11:20,356 | INFO     | all workflow threads have been joined
[2025-10-19 10:11:20] 2025-10-19 08:11:20,357 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 10:11:20] 2025-10-19 08:11:20,358 | INFO     | traces error code: 0
[2025-10-19 10:11:20] 2025-10-19 08:11:20,358 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 10:11:20] 2025-10-19 08:11:20,405 [wrapper] ==== pilot stdout END ====
[2025-10-19 10:11:20] 2025-10-19 08:11:20,408 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 10:11:20] 2025-10-19 08:11:20,411 [wrapper] pilotpid: 1684692
[2025-10-19 10:11:20] 2025-10-19 08:11:20,413 [wrapper] Pilot exit status: 0
[2025-10-19 10:11:20] 2025-10-19 08:11:20,421 [wrapper] pandaids: 6848037267
[2025-10-19 10:11:20] 2025-10-19 08:11:20,439 [wrapper] cleanup supervisor_pilot 1703896 1684693
[2025-10-19 10:11:20] 2025-10-19 08:11:20,442 [wrapper] Test setup, not cleaning
[2025-10-19 10:11:20] 2025-10-19 08:11:20,445 [wrapper] apfmon messages muted
[2025-10-19 10:11:20] 2025-10-19 08:11:20,448 [wrapper] ==== wrapper stdout END ====
[2025-10-19 10:11:20] 2025-10-19 08:11:20,451 [wrapper] ==== wrapper stderr END ====
[2025-10-19 10:11:20]  *** Error codes and diagnostics ***
[2025-10-19 10:11:20]     "exeErrorCode": 0,
[2025-10-19 10:11:20]     "exeErrorDiag": "",
[2025-10-19 10:11:20]     "pilotErrorCode": 0,
[2025-10-19 10:11:20]     "pilotErrorDiag": "",
[2025-10-19 10:11:20]  *** Listing of results directory ***
[2025-10-19 10:11:20] total 440256
[2025-10-19 10:11:20] -rw-r--r-- 1 boinc boinc    557409 Oct 18 15:39 pilot3.tar.gz
[2025-10-19 10:11:20] -rw-r--r-- 1 boinc boinc      5112 Oct 18 16:16 queuedata.json
[2025-10-19 10:11:20] -rwx------ 1 boinc boinc     36292 Oct 18 16:17 runpilot2-wrapper.sh
[2025-10-19 10:11:20] -rw-r--r-- 1 boinc boinc       100 Oct 19 08:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 10:11:20] -rwxr-xr-x 1 boinc boinc      7986 Oct 19 08:28 run_atlas
[2025-10-19 10:11:20] -rw-r--r-- 1 boinc boinc       105 Oct 19 08:28 job.xml
[2025-10-19 10:11:20] -rw-r--r-- 2 boinc boinc 230899782 Oct 19 08:28 EVNT.46771634._001847.pool.root.1
[2025-10-19 10:11:20] -rw-r--r-- 2 boinc boinc    569679 Oct 19 08:28 input.tar.gz
[2025-10-19 10:11:20] -rw-r--r-- 2 boinc boinc     15120 Oct 19 08:28 start_atlas.sh
[2025-10-19 10:11:20] drwxrwx--x 2 boinc boinc      4096 Oct 19 08:28 shared
[2025-10-19 10:11:20] -rw-r--r-- 1 boinc boinc         0 Oct 19 08:28 boinc_setup_complete
[2025-10-19 10:11:20] -rw-r--r-- 1 boinc boinc      6200 Oct 19 08:28 init_data.xml
[2025-10-19 10:11:20] -rw-r--r-- 1 boinc boinc         0 Oct 19 08:28 boinc_lockfile
[2025-10-19 10:11:20] -rw-r--r-- 1 boinc boinc      2558 Oct 19 08:28 pandaJob.out
[2025-10-19 10:11:20] -rw------- 1 boinc boinc    976750 Oct 19 08:29 agis_schedconf.cvmfs.json
[2025-10-19 10:11:20] -rw------- 1 boinc boinc   1560740 Oct 19 08:29 agis_ddmendpoints.agis.ALL.json
[2025-10-19 10:11:20] drwx------ 5 boinc boinc      4096 Oct 19 08:29 pilot3
[2025-10-19 10:11:20] -rw------- 1 boinc boinc 213723228 Oct 19 10:09 HITS.46771637._043775.pool.root.1
[2025-10-19 10:11:20] -rw-r--r-- 1 boinc boinc       529 Oct 19 10:10 boinc_task_state.xml
[2025-10-19 10:11:20] -rw------- 1 boinc boinc      1017 Oct 19 10:10 memory_monitor_summary.json
[2025-10-19 10:11:20] -rw------- 1 boinc boinc    263354 Oct 19 10:10 log.46771637._043775.job.log.tgz.1
[2025-10-19 10:11:20] -rw------- 1 boinc boinc      7765 Oct 19 10:10 heartbeat.json
[2025-10-19 10:11:20] -rw------- 1 boinc boinc        95 Oct 19 10:10 pilot_heartbeat.json
[2025-10-19 10:11:20] -rw-r--r-- 1 boinc boinc        27 Oct 19 10:11 wrapper_checkpoint.txt
[2025-10-19 10:11:20] -rw-r--r-- 1 boinc boinc      8192 Oct 19 10:11 boinc_mmap_file
[2025-10-19 10:11:20] -rw------- 1 boinc boinc      5010 Oct 19 10:11 pilotlog.txt
[2025-10-19 10:11:20] -rw------- 1 boinc boinc    881121 Oct 19 10:11 log.46771637._043775.job.log.1
[2025-10-19 10:11:20] -rw------- 1 boinc boinc       357 Oct 19 10:11 output.list
[2025-10-19 10:11:20] -rw-r--r-- 1 boinc boinc       620 Oct 19 10:11 runtime_log
[2025-10-19 10:11:20] -rw------- 1 boinc boinc   1167360 Oct 19 10:11 result.tar.gz
[2025-10-19 10:11:20] -rw-r--r-- 1 boinc boinc      8787 Oct 19 10:11 runtime_log.err
[2025-10-19 10:11:20] -rw------- 1 boinc boinc       660 Oct 19 10:11 B92KDmevMU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6OxNDmLTJJhm.diag
[2025-10-19 10:11:20] -rw-r--r-- 1 boinc boinc     22233 Oct 19 10:11 stderr.txt
[2025-10-19 10:11:20] HITS file was successfully produced:
[2025-10-19 10:11:20] -rw------- 1 boinc boinc 213723228 Oct 19 10:09 shared/HITS.pool.root.1
[2025-10-19 10:11:20]  *** Contents of shared directory: ***
[2025-10-19 10:11:20] total 435928
[2025-10-19 10:11:20] -rw-r--r-- 2 boinc boinc 230899782 Oct 19 08:28 ATLAS.root_0
[2025-10-19 10:11:20] -rw-r--r-- 2 boinc boinc    569679 Oct 19 08:28 input.tar.gz
[2025-10-19 10:11:20] -rw-r--r-- 2 boinc boinc     15120 Oct 19 08:28 start_atlas.sh
[2025-10-19 10:11:20] -rw------- 1 boinc boinc 213723228 Oct 19 10:09 HITS.pool.root.1
[2025-10-19 10:11:20] -rw------- 1 boinc boinc   1167360 Oct 19 10:11 result.tar.gz
10:11:21 (1680961): run_atlas exited; CPU time 17491.164750
10:11:21 (1680961): called boinc_finish(0)

</stderr_txt>
]]>

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