Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:12:42 (1884699): wrapper (7.7.26015): starting
07:12:42 (1884699): wrapper: running run_atlas (--nthreads 4)
[2025-10-19 07:12:42] Arguments: --nthreads 4
[2025-10-19 07:12:42] Threads: 4
[2025-10-19 07:12:42] Checking for CVMFS
[2025-10-19 07:12:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 07:12:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 07:12:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 07:12:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 07:12:42] 2.9.2.0 85452 4496 99848 151875 3 187 23408006 36864000 0 130560 0 4726700 99.993 159920 2043 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-19 07:12:42] CVMFS is ok
[2025-10-19 07:12:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 07:12:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 07:12:42] Further information can be found at the LHC@home message board.
[2025-10-19 07:12:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 07:12:42] Checking for apptainer binary...
[2025-10-19 07:12:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 07:12:42] Running /usr/bin/apptainer --version
[2025-10-19 07:12:42] apptainer version 1.4.1-1.1
[2025-10-19 07:12:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 07:12:42] thA373a
[2025-10-19 07:12:42] apptainer works
[2025-10-19 07:12:42] Set ATHENA_PROC_NUMBER=4
[2025-10-19 07:12:42] Set ATHENA_CORE_NUMBER=4
[2025-10-19 07:12:42] Starting ATLAS job with PandaID=6850267856
[2025-10-19 07:12:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 08:09:16]  *** The last 200 lines of the pilot log: ***
[2025-10-19 08:09:16] 2025-10-19 06:08:45,299 | INFO     | did not find any defunct processes belonging to 1895070
[2025-10-19 08:09:16] 2025-10-19 06:08:45,300 | INFO     | did not find any defunct processes belonging to 1895070
[2025-10-19 08:09:16] 2025-10-19 06:08:45,300 | INFO     | ready for new job
[2025-10-19 08:09:16] 2025-10-19 06:08:45,301 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 08:09:16] 2025-10-19 06:08:45,301 | INFO     | ***************************************
[2025-10-19 08:09:16] 2025-10-19 06:08:45,301 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 08:09:16] 2025-10-19 06:08:45,301 | INFO     | ***************************************
[2025-10-19 08:09:16] 2025-10-19 06:08:45,301 | INFO     | 
[2025-10-19 08:09:16] 2025-10-19 06:08:45,302 | INFO     | architecture information:
[2025-10-19 08:09:16] 2025-10-19 06:08:45,302 | INFO     | executing command: cat /etc/os-release
[2025-10-19 08:09:16] 2025-10-19 06:08:45,316 | INFO     | cat /etc/os-release:
[2025-10-19 08:09:16] NAME="CentOS Linux"
[2025-10-19 08:09:16] VERSION="7 (Core)"
[2025-10-19 08:09:16] ID="centos"
[2025-10-19 08:09:16] ID_LIKE="rhel fedora"
[2025-10-19 08:09:16] VERSION_ID="7"
[2025-10-19 08:09:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 08:09:16] ANSI_COLOR="0;31"
[2025-10-19 08:09:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 08:09:16] HOME_URL="https://www.centos.org/"
[2025-10-19 08:09:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 08:09:16] 
[2025-10-19 08:09:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 08:09:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 08:09:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 08:09:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 08:09:16] 
[2025-10-19 08:09:16] 2025-10-19 06:08:45,316 | INFO     | ***************************************
[2025-10-19 08:09:16] 2025-10-19 06:08:45,819 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-19 08:09:16] 2025-10-19 06:08:45,836 | INFO     | sufficient remaining disk space (337331093504 B)
[2025-10-19 08:09:16] 2025-10-19 06:08:45,837 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 08:09:16] 2025-10-19 06:08:45,837 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 08:09:16] 2025-10-19 06:08:45,837 | INFO     | update_server=False
[2025-10-19 08:09:16] 2025-10-19 06:08:45,837 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 08:09:16] 2025-10-19 06:08:45,837 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 08:09:16] 2025-10-19 06:08:45,837 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 08:09:16] 2025-10-19 06:08:46,018 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 08:09:16] 2025-10-19 06:08:46,019 | INFO     | aborting loop
[2025-10-19 08:09:16] 2025-10-19 06:08:46,172 | INFO     | all job control threads have been joined
[2025-10-19 08:09:16] 2025-10-19 06:08:46,355 | INFO     | all data control threads have been joined
[2025-10-19 08:09:16] 2025-10-19 06:08:46,687 | INFO     | all payload control threads have been joined
[2025-10-19 08:09:16] 2025-10-19 06:08:46,842 | INFO     | [job] retrieve thread has finished
[2025-10-19 08:09:16] 2025-10-19 06:08:46,843 | INFO     | [job] queue monitor thread has finished
[2025-10-19 08:09:16] 2025-10-19 06:08:46,896 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 08:09:16] 2025-10-19 06:08:46,953 | INFO     | [data] copytool_in thread has finished
[2025-10-19 08:09:16] 2025-10-19 06:08:46,997 | INFO     | [payload] validate_post thread has finished
[2025-10-19 08:09:16] 2025-10-19 06:08:47,024 | INFO     | [job] job monitor thread has finished
[2025-10-19 08:09:16] 2025-10-19 06:08:47,178 | INFO     | [job] control thread has finished
[2025-10-19 08:09:16] 2025-10-19 06:08:47,361 | INFO     | [data] control thread has finished
[2025-10-19 08:09:16] 2025-10-19 06:08:47,693 | INFO     | [payload] control thread has finished
[2025-10-19 08:09:16] 2025-10-19 06:08:47,732 | INFO     | [payload] failed_post thread has finished
[2025-10-19 08:09:16] 2025-10-19 06:08:47,755 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 08:09:16] 2025-10-19 06:08:47,759 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 08:09:16] 2025-10-19 06:08:47,843 | INFO     | [data] copytool_out thread has finished
[2025-10-19 08:09:16] 2025-10-19 06:08:48,041 | INFO     | [job] validate thread has finished
[2025-10-19 08:09:16] 2025-10-19 06:08:48,280 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 08:09:16] 2025-10-19 06:08:48,400 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 08:09:16] 2025-10-19 06:08:52,407 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 08:09:16] 2025-10-19 06:08:53,980 | INFO     | [monitor] cgroup control has ended
[2025-10-19 08:09:16] 2025-10-19 06:08:54,076 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140288239806272)>', '<ExcThread(monitor, started 140287414347520)>']
[2025-10-19 08:09:16] 2025-10-19 06:08:59,102 | INFO     | all workflow threads have been joined
[2025-10-19 08:09:16] 2025-10-19 06:08:59,102 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 08:09:16] 2025-10-19 06:08:59,102 | INFO     | traces error code: 0
[2025-10-19 08:09:16] 2025-10-19 06:08:59,102 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 08:09:16] 2025-10-19 06:09:16,604 | INFO     | PID=1888496 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-19 08:09:16] 2025-10-19 06:09:16,604 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 08:09:16] 2025-10-19 06:09:16,605 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 08:09:16] 2025-10-19 06:09:16,605 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 08:09:16] 2025-10-19 06:09:16,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 08:09:16] 2025-10-19 06:09:16,605 | INFO     | [monitor] control thread has ended
[2025-10-19 08:09:16] 2025-10-19 06:09:16,681 [wrapper] ==== pilot stdout END ====
[2025-10-19 08:09:16] 2025-10-19 06:09:16,685 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 08:09:16] 2025-10-19 06:09:16,689 [wrapper] pilotpid: 1888496
[2025-10-19 08:09:16] 2025-10-19 06:09:16,693 [wrapper] Pilot exit status: 0
[2025-10-19 08:09:16] 2025-10-19 06:09:16,704 [wrapper] pandaids: 6850267856
[2025-10-19 08:09:16] 2025-10-19 06:09:16,726 [wrapper] cleanup supervisor_pilot 1904903 1888497
[2025-10-19 08:09:16] 2025-10-19 06:09:16,730 [wrapper] Test setup, not cleaning
[2025-10-19 08:09:16] 2025-10-19 06:09:16,734 [wrapper] apfmon messages muted
[2025-10-19 08:09:16] 2025-10-19 06:09:16,738 [wrapper] ==== wrapper stdout END ====
[2025-10-19 08:09:16] 2025-10-19 06:09:16,741 [wrapper] ==== wrapper stderr END ====
[2025-10-19 08:09:16]  *** Error codes and diagnostics ***
[2025-10-19 08:09:16]     "exeErrorCode": 0,
[2025-10-19 08:09:16]     "exeErrorDiag": "",
[2025-10-19 08:09:16]     "pilotErrorCode": 0,
[2025-10-19 08:09:16]     "pilotErrorDiag": "",
[2025-10-19 08:09:16]  *** Listing of results directory ***
[2025-10-19 08:09:16] total 333136
[2025-10-19 08:09:16] -rw-r--r-- 1 boinc boinc    557409 Oct 18 17:20 pilot3.tar.gz
[2025-10-19 08:09:16] -rwx------ 1 boinc boinc     36292 Oct 18 17:34 runpilot2-wrapper.sh
[2025-10-19 08:09:16] -rw-r--r-- 1 boinc boinc      5112 Oct 18 17:34 queuedata.json
[2025-10-19 08:09:16] -rw-r--r-- 1 boinc boinc       100 Oct 19 07:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 08:09:16] -rwxr-xr-x 1 boinc boinc      7986 Oct 19 07:12 run_atlas
[2025-10-19 08:09:16] -rw-r--r-- 1 boinc boinc       105 Oct 19 07:12 job.xml
[2025-10-19 08:09:16] -rw-r--r-- 2 boinc boinc 192477761 Oct 19 07:12 EVNT.46808900._000120.pool.root.1
[2025-10-19 08:09:16] -rw-r--r-- 2 boinc boinc    569670 Oct 19 07:12 input.tar.gz
[2025-10-19 08:09:16] -rw-r--r-- 2 boinc boinc     15120 Oct 19 07:12 start_atlas.sh
[2025-10-19 08:09:16] drwxrwx--x 2 boinc boinc      4096 Oct 19 07:12 shared
[2025-10-19 08:09:16] -rw-r--r-- 1 boinc boinc         0 Oct 19 07:12 boinc_setup_complete
[2025-10-19 08:09:16] -rw-r--r-- 1 boinc boinc      6376 Oct 19 07:12 init_data.xml
[2025-10-19 08:09:16] -rw-r--r-- 1 boinc boinc         0 Oct 19 07:12 boinc_lockfile
[2025-10-19 08:09:16] -rw-r--r-- 1 boinc boinc      2503 Oct 19 07:12 pandaJob.out
[2025-10-19 08:09:16] -rw------- 1 boinc boinc    976750 Oct 19 07:12 agis_schedconf.cvmfs.json
[2025-10-19 08:09:16] -rw------- 1 boinc boinc   1560740 Oct 19 07:12 agis_ddmendpoints.agis.ALL.json
[2025-10-19 08:09:16] drwx------ 5 boinc boinc      4096 Oct 19 07:12 pilot3
[2025-10-19 08:09:16] -rw------- 1 boinc boinc 143228135 Oct 19 08:08 HITS.46808902._002956.pool.root.1
[2025-10-19 08:09:16] -rw-r--r-- 1 boinc boinc       529 Oct 19 08:08 boinc_task_state.xml
[2025-10-19 08:09:16] -rw------- 1 boinc boinc      1018 Oct 19 08:08 memory_monitor_summary.json
[2025-10-19 08:09:16] -rw------- 1 boinc boinc    258282 Oct 19 08:08 log.46808902._002956.job.log.tgz.1
[2025-10-19 08:09:16] -rw------- 1 boinc boinc      7746 Oct 19 08:08 heartbeat.json
[2025-10-19 08:09:16] -rw-r--r-- 1 boinc boinc        27 Oct 19 08:09 wrapper_checkpoint.txt
[2025-10-19 08:09:16] -rw-r--r-- 1 boinc boinc      8192 Oct 19 08:09 boinc_mmap_file
[2025-10-19 08:09:16] -rw------- 1 boinc boinc       747 Oct 19 08:09 pilotlog.txt
[2025-10-19 08:09:16] -rw------- 1 boinc boinc        95 Oct 19 08:09 pilot_heartbeat.json
[2025-10-19 08:09:16] -rw------- 1 boinc boinc    508395 Oct 19 08:09 log.46808902._002956.job.log.1
[2025-10-19 08:09:16] -rw------- 1 boinc boinc       357 Oct 19 08:09 output.list
[2025-10-19 08:09:16] -rw-r--r-- 1 boinc boinc       620 Oct 19 08:09 runtime_log
[2025-10-19 08:09:16] -rw------- 1 boinc boinc    788480 Oct 19 08:09 result.tar.gz
[2025-10-19 08:09:16] -rw-r--r-- 1 boinc boinc      8782 Oct 19 08:09 runtime_log.err
[2025-10-19 08:09:16] -rw------- 1 boinc boinc       658 Oct 19 08:09 UFhMDmj7NU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmldxNDmYIxL6m.diag
[2025-10-19 08:09:16] -rw-r--r-- 1 boinc boinc      9756 Oct 19 08:09 stderr.txt
[2025-10-19 08:09:16] HITS file was successfully produced:
[2025-10-19 08:09:16] -rw------- 1 boinc boinc 143228135 Oct 19 08:08 shared/HITS.pool.root.1
[2025-10-19 08:09:16]  *** Contents of shared directory: ***
[2025-10-19 08:09:16] total 329192
[2025-10-19 08:09:16] -rw-r--r-- 2 boinc boinc 192477761 Oct 19 07:12 ATLAS.root_0
[2025-10-19 08:09:16] -rw-r--r-- 2 boinc boinc    569670 Oct 19 07:12 input.tar.gz
[2025-10-19 08:09:16] -rw-r--r-- 2 boinc boinc     15120 Oct 19 07:12 start_atlas.sh
[2025-10-19 08:09:16] -rw------- 1 boinc boinc 143228135 Oct 19 08:08 HITS.pool.root.1
[2025-10-19 08:09:16] -rw------- 1 boinc boinc    788480 Oct 19 08:09 result.tar.gz
08:09:18 (1884699): run_atlas exited; CPU time 12465.036095
08:09:18 (1884699): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN