Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:22:41 (2606801): wrapper (7.7.26015): starting
22:22:41 (2606801): wrapper: running run_atlas (--nthreads 8)
[2025-10-18 22:22:41] Arguments: --nthreads 8
[2025-10-18 22:22:41] Threads: 8
[2025-10-18 22:22:41] Checking for CVMFS
[2025-10-18 22:22:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 22:22:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 22:22:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 22:22:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 22:22:43] 2.13.2.0 738863 138737 323600 151872 2 166 23211556 32935937 21083 16776704 0 150374565 99.733 104439324 30587 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-18 22:22:43] CVMFS is ok
[2025-10-18 22:22:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 22:22:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 22:22:43] Further information can be found at the LHC@home message board.
[2025-10-18 22:22:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 22:22:43] Checking for apptainer binary...
[2025-10-18 22:22:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 22:22:43] Running /usr/bin/apptainer --version
[2025-10-18 22:22:43] apptainer version 1.4.3-1.el9
[2025-10-18 22:22:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 22:22:44] c-4-38.aglt2.org
[2025-10-18 22:22:44] apptainer works
[2025-10-18 22:22:44] Set ATHENA_PROC_NUMBER=8
[2025-10-18 22:22:44] Set ATHENA_CORE_NUMBER=8
[2025-10-18 22:22:44] Starting ATLAS job with PandaID=6848040973
[2025-10-18 22:22:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 03:54:18]  *** The last 200 lines of the pilot log: ***
[2025-10-19 03:54:18] 2025-10-19 07:53:38,609 | INFO     | sum of square deviations: 10449445145.362265
[2025-10-19 03:54:18] 2025-10-19 07:53:38,663 | INFO     | time since job start (19811s) is within the limit (172800.0s)
[2025-10-19 03:54:18] 2025-10-19 07:53:38,693 | INFO     | sum of deviations: -32835924830.75541
[2025-10-19 03:54:18] 2025-10-19 07:53:38,693 | INFO     | mean x: 1760850518.7182662
[2025-10-19 03:54:18] 2025-10-19 07:53:38,693 | INFO     | mean y: 2225659.3653250774
[2025-10-19 03:54:18] 2025-10-19 07:53:38,693 | INFO     | -- intersect: 5535452971.103623
[2025-10-19 03:54:18] 2025-10-19 07:53:38,693 | INFO     | intersect: 5535452971.103623
[2025-10-19 03:54:18] 2025-10-19 07:53:38,694 | INFO     | chi2: 3.1895974019458047
[2025-10-19 03:54:18] 2025-10-19 07:53:38,738 | INFO     | sum of square deviations: 9971690917.147766
[2025-10-19 03:54:18] 2025-10-19 07:53:38,743 | INFO     | sum of deviations: -11701028992.135195
[2025-10-19 03:54:18] 2025-10-19 07:53:38,743 | INFO     | mean x: 1760850366.2232704
[2025-10-19 03:54:18] 2025-10-19 07:53:38,743 | INFO     | mean y: 2232324.072327044
[2025-10-19 03:54:18] 2025-10-19 07:53:38,743 | INFO     | -- intersect: 2068457737.312845
[2025-10-19 03:54:18] 2025-10-19 07:53:38,743 | INFO     | intersect: 2068457737.312845
[2025-10-19 03:54:18] 2025-10-19 07:53:38,744 | INFO     | chi2: 2.314237227532137
[2025-10-19 03:54:18] 2025-10-19 07:53:38,744 | INFO     | current chi2=2.314237227532137 (change=27.444221451887834 %)
[2025-10-19 03:54:18] 2025-10-19 07:53:38,745 | INFO     | sum of square deviations: 9508591622.958426
[2025-10-19 03:54:18] 2025-10-19 07:53:38,801 | INFO     | sum of deviations: -10978868590.46966
[2025-10-19 03:54:18] 2025-10-19 07:53:38,801 | INFO     | mean x: 1760850213.7060702
[2025-10-19 03:54:18] 2025-10-19 07:53:38,801 | INFO     | mean y: 2232560.984025559
[2025-10-19 03:54:18] 2025-10-19 07:53:38,801 | INFO     | -- intersect: 2035356273.7641644
[2025-10-19 03:54:18] 2025-10-19 07:53:38,801 | INFO     | intersect: 2035356273.7641644
[2025-10-19 03:54:18] 2025-10-19 07:53:38,802 | INFO     | chi2: 2.313913969853641
[2025-10-19 03:54:18] 2025-10-19 07:53:38,802 | INFO     | current chi2=2.313913969853641 (change=0.013968217028506012 %)
[2025-10-19 03:54:18] 2025-10-19 07:53:38,802 | INFO     | right removable region: 312
[2025-10-19 03:54:18] 2025-10-19 07:53:38,807 | INFO     | sum of square deviations: 9971588680.242086
[2025-10-19 03:54:18] 2025-10-19 07:53:38,850 | INFO     | sum of deviations: -92702370808.45609
[2025-10-19 03:54:18] 2025-10-19 07:53:38,850 | INFO     | mean x: 1760850671.2295597
[2025-10-19 03:54:18] 2025-10-19 07:53:38,851 | INFO     | mean y: 2244681.8144654087
[2025-10-19 03:54:18] 2025-10-19 07:53:38,851 | INFO     | -- intersect: 16372257234.185255
[2025-10-19 03:54:18] 2025-10-19 07:53:38,851 | INFO     | intersect: 16372257234.185255
[2025-10-19 03:54:18] 2025-10-19 07:53:38,851 | INFO     | chi2: 1.1970705388902165
[2025-10-19 03:54:18] 2025-10-19 07:53:38,852 | INFO     | current chi2=1.1970705388902165 (change=62.46954119789704 %)
[2025-10-19 03:54:18] 2025-10-19 07:53:38,852 | INFO     | sum of square deviations: 9508523190.03833
[2025-10-19 03:54:18] 2025-10-19 07:53:38,859 | INFO     | sum of deviations: -92303069120.66452
[2025-10-19 03:54:18] 2025-10-19 07:53:38,859 | INFO     | mean x: 1760850823.741214
[2025-10-19 03:54:18] 2025-10-19 07:53:38,859 | INFO     | mean y: 2244511.485623003
[2025-10-19 03:54:18] 2025-10-19 07:53:38,859 | INFO     | -- intersect: 17095533558.226557
[2025-10-19 03:54:18] 2025-10-19 07:53:38,860 | INFO     | intersect: 17095533558.226557
[2025-10-19 03:54:18] 2025-10-19 07:53:38,860 | INFO     | chi2: 1.12116918236061
[2025-10-19 03:54:18] 2025-10-19 07:53:38,860 | INFO     | current chi2=1.12116918236061 (change=6.340591808396967 %)
[2025-10-19 03:54:18] 2025-10-19 07:53:38,861 | INFO     | left removable region: 20
[2025-10-19 03:54:18] 2025-10-19 07:53:38,861 | INFO     | sum of square deviations: 7720152911.082167
[2025-10-19 03:54:18] 2025-10-19 07:53:38,864 | INFO     | sum of deviations: -54838379438.835625
[2025-10-19 03:54:18] 2025-10-19 07:53:38,864 | INFO     | mean x: 1760850793.2260275
[2025-10-19 03:54:18] 2025-10-19 07:53:38,864 | INFO     | mean y: 2246961.4520547944
[2025-10-19 03:54:18] 2025-10-19 07:53:38,864 | INFO     | -- intersect: 12510056721.99319
[2025-10-19 03:54:18] 2025-10-19 07:53:38,864 | INFO     | intersect: 12510056721.99319
[2025-10-19 03:54:18] 2025-10-19 07:53:38,865 | INFO     | chi2: 0.19413544284445816
[2025-10-19 03:54:18] 2025-10-19 07:53:38,865 | INFO     | -- intersect: 12510056721.99319
[2025-10-19 03:54:18] 2025-10-19 07:53:38,865 | INFO     | current memory leak: -7.10 B/s (using 292 data points, chi2=0.19)
[2025-10-19 03:54:18] 2025-10-19 07:53:38,866 | INFO     | could have reported an average CPU frequency of 2601 MHz (14 samples)
[2025-10-19 03:54:18] 2025-10-19 07:53:38,866 | INFO     | ..............................
[2025-10-19 03:54:18] 2025-10-19 07:53:38,866 | INFO     | . Timing measurements:
[2025-10-19 03:54:18] 2025-10-19 07:53:38,866 | INFO     | . get job = 0 s
[2025-10-19 03:54:18] 2025-10-19 07:53:38,866 | INFO     | . initial setup = 5 s
[2025-10-19 03:54:18] 2025-10-19 07:53:38,867 | INFO     | . payload setup = 26 s
[2025-10-19 03:54:18] 2025-10-19 07:53:38,867 | INFO     | . stage-in = 0 s
[2025-10-19 03:54:18] 2025-10-19 07:53:38,867 | INFO     | . payload execution = 19706 s
[2025-10-19 03:54:18] 2025-10-19 07:53:38,867 | INFO     | . stage-out = 6 s
[2025-10-19 03:54:18] 2025-10-19 07:53:38,867 | INFO     | . log creation = 1 s
[2025-10-19 03:54:18] 2025-10-19 07:53:38,867 | INFO     | ..............................
[2025-10-19 03:54:18] 2025-10-19 07:53:39,247 | INFO     | 
[2025-10-19 03:54:18] 2025-10-19 07:53:39,248 | INFO     | job summary report
[2025-10-19 03:54:18] 2025-10-19 07:53:39,253 | INFO     | --------------------------------------------------
[2025-10-19 03:54:18] 2025-10-19 07:53:39,253 | INFO     | PanDA job id: 6848040973
[2025-10-19 03:54:18] 2025-10-19 07:53:39,253 | INFO     | task id: 46771637
[2025-10-19 03:54:18] 2025-10-19 07:53:39,253 | INFO     | errors: (none)
[2025-10-19 03:54:18] 2025-10-19 07:53:39,253 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-19 03:54:18] 2025-10-19 07:53:39,253 | INFO     | pilot state: finished 
[2025-10-19 03:54:18] 2025-10-19 07:53:39,253 | INFO     | transexitcode: 0
[2025-10-19 03:54:18] 2025-10-19 07:53:39,253 | INFO     | exeerrorcode: 0
[2025-10-19 03:54:18] 2025-10-19 07:53:39,254 | INFO     | exeerrordiag: 
[2025-10-19 03:54:18] 2025-10-19 07:53:39,254 | INFO     | exitcode: 0
[2025-10-19 03:54:18] 2025-10-19 07:53:39,254 | INFO     | exitmsg: OK
[2025-10-19 03:54:18] 2025-10-19 07:53:39,254 | INFO     | cpuconsumptiontime: 54735 s
[2025-10-19 03:54:18] 2025-10-19 07:53:39,254 | INFO     | nevents: 400
[2025-10-19 03:54:18] 2025-10-19 07:53:39,254 | INFO     | neventsw: 0
[2025-10-19 03:54:18] 2025-10-19 07:53:39,254 | INFO     | pid: 2618497
[2025-10-19 03:54:18] 2025-10-19 07:53:39,254 | INFO     | pgrp: 2618497
[2025-10-19 03:54:18] 2025-10-19 07:53:39,254 | INFO     | corecount: 8
[2025-10-19 03:54:18] 2025-10-19 07:53:39,255 | INFO     | event service: False
[2025-10-19 03:54:18] 2025-10-19 07:53:39,255 | INFO     | sizes: {0: 2348756, 1: 2348955, 12: 2348955, 17: 2349245, 23: 2349273, 19737: 2381539, 19738: 2381666, 19745: 2390720, 19746: 2390776, 19768: 2390970}
[2025-10-19 03:54:18] 2025-10-19 07:53:39,255 | INFO     | --------------------------------------------------
[2025-10-19 03:54:18] 2025-10-19 07:53:39,255 | INFO     | 
[2025-10-19 03:54:18] 2025-10-19 07:53:39,255 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-19 03:54:18] 2025-10-19 07:53:39,580 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,580 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,580 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,581 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,581 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,581 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,581 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,581 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,581 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,581 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,581 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,581 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,581 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,582 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,582 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,582 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,582 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,582 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-19 03:54:18] 2025-10-19 07:53:39,582 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,582 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-19 03:54:18] 2025-10-19 07:53:39,582 | INFO     | job 6848040973 has completed (purged errors)
[2025-10-19 03:54:18] 2025-10-19 07:53:39,582 | INFO     | overall cleanup function is called
[2025-10-19 03:54:18] 2025-10-19 07:53:40,726 | INFO     | --- collectZombieJob: --- 10, [2618497]
[2025-10-19 03:54:18] 2025-10-19 07:53:40,727 | INFO     | zombie collector waiting for pid 2618497
[2025-10-19 03:54:18] 2025-10-19 07:53:40,727 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-19 03:54:18] 2025-10-19 07:53:40,728 | INFO     | collected zombie processes
[2025-10-19 03:54:18] 2025-10-19 07:53:40,728 | INFO     | will attempt to kill all subprocesses of pid=2618497
[2025-10-19 03:54:18] 2025-10-19 07:53:44,185 | INFO     | PID=2610696 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-19 03:54:18] 2025-10-19 07:53:44,185 | INFO     | .. there are 26 such processes running
[2025-10-19 03:54:18] 2025-10-19 07:53:44,514 | INFO     | process IDs to be killed: [2618497] (in reverse order)
[2025-10-19 03:54:18] 2025-10-19 07:53:44,679 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 03:54:18] 2025-10-19 07:53:44,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 03:54:18] 2025-10-19 07:53:44,694 | INFO     | did not find any defunct processes belonging to 2618497
[2025-10-19 03:54:18] 2025-10-19 07:53:44,709 | INFO     | did not find any defunct processes belonging to 2618497
[2025-10-19 03:54:18] 2025-10-19 07:53:44,709 | INFO     | ready for new job
[2025-10-19 03:54:18] 2025-10-19 07:53:44,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 03:54:18] 2025-10-19 07:53:44,713 | INFO     | ***************************************
[2025-10-19 03:54:18] 2025-10-19 07:53:44,713 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 03:54:18] 2025-10-19 07:53:44,713 | INFO     | ***************************************
[2025-10-19 03:54:18] 2025-10-19 07:53:44,713 | INFO     | 
[2025-10-19 03:54:18] 2025-10-19 07:53:44,715 | INFO     | architecture information:
[2025-10-19 03:54:18] 2025-10-19 07:53:44,716 | INFO     | executing command: cat /etc/os-release
[2025-10-19 03:54:18] 2025-10-19 07:53:44,737 | INFO     | cat /etc/os-release:
[2025-10-19 03:54:18] NAME="CentOS Linux"
[2025-10-19 03:54:18] VERSION="7 (Core)"
[2025-10-19 03:54:18] ID="centos"
[2025-10-19 03:54:18] ID_LIKE="rhel fedora"
[2025-10-19 03:54:18] VERSION_ID="7"
[2025-10-19 03:54:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 03:54:18] ANSI_COLOR="0;31"
[2025-10-19 03:54:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 03:54:18] HOME_URL="https://www.centos.org/"
[2025-10-19 03:54:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 03:54:18] 
[2025-10-19 03:54:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 03:54:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 03:54:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 03:54:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 03:54:18] 
[2025-10-19 03:54:18] 2025-10-19 07:53:44,737 | INFO     | ***************************************
[2025-10-19 03:54:18] 2025-10-19 07:53:45,242 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-19 03:54:18] 2025-10-19 07:53:45,399 | INFO     | sufficient remaining disk space (75986108416 B)
[2025-10-19 03:54:18] 2025-10-19 07:53:45,400 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 03:54:18] 2025-10-19 07:53:45,400 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 03:54:18] 2025-10-19 07:53:45,400 | INFO     | update_server=False
[2025-10-19 03:54:18] 2025-10-19 07:53:45,400 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 03:54:18] 2025-10-19 07:53:45,411 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 03:54:18] 2025-10-19 07:53:45,418 | INFO     | all payload control threads have been joined
[2025-10-19 03:54:18] 2025-10-19 07:53:45,531 | INFO     | all data control threads have been joined
[2025-10-19 03:54:18] 2025-10-19 07:53:46,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 03:54:18] 2025-10-19 07:53:46,044 | INFO     | aborting loop
[2025-10-19 03:54:18] 2025-10-19 07:53:46,316 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 03:54:18] 2025-10-19 07:53:46,406 | INFO     | [job] retrieve thread has finished
[2025-10-19 03:54:18] 2025-10-19 07:53:46,423 | INFO     | [payload] control thread has finished
[2025-10-19 03:54:18] 2025-10-19 07:53:46,536 | INFO     | [data] control thread has finished
[2025-10-19 03:54:18] 2025-10-19 07:53:47,022 | INFO     | all job control threads have been joined
[2025-10-19 03:54:18] 2025-10-19 07:53:47,050 | INFO     | [job] job monitor thread has finished
[2025-10-19 03:54:18] 2025-10-19 07:53:47,053 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 03:54:18] 2025-10-19 07:53:47,287 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 03:54:18] 2025-10-19 07:53:47,423 | INFO     | [data] copytool_out thread has finished
[2025-10-19 03:54:18] 2025-10-19 07:53:47,562 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 03:54:18] 2025-10-19 07:53:47,612 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 03:54:18] 2025-10-19 07:53:47,626 | INFO     | [job] validate thread has finished
[2025-10-19 03:54:18] 2025-10-19 07:53:47,794 | INFO     | [data] copytool_in thread has finished
[2025-10-19 03:54:18] 2025-10-19 07:53:48,028 | INFO     | [job] control thread has finished
[2025-10-19 03:54:18] 2025-10-19 07:53:48,028 | INFO     | [payload] validate_post thread has finished
[2025-10-19 03:54:18] 2025-10-19 07:53:48,034 | INFO     | [payload] failed_post thread has finished
[2025-10-19 03:54:18] 2025-10-19 07:53:48,112 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 03:54:18] 2025-10-19 07:53:49,122 | INFO     | [job] queue monitor thread has finished
[2025-10-19 03:54:18] 2025-10-19 07:53:50,341 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 03:54:18] 2025-10-19 07:54:07,526 | INFO     | [monitor] cgroup control has ended
[2025-10-19 03:54:18] 2025-10-19 07:54:07,883 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140180499777344)>', '<ExcThread(monitor, started 140180226807552)>']
[2025-10-19 03:54:18] 2025-10-19 07:54:12,910 | INFO     | all workflow threads have been joined
[2025-10-19 03:54:18] 2025-10-19 07:54:12,923 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 03:54:18] 2025-10-19 07:54:12,923 | INFO     | traces error code: 0
[2025-10-19 03:54:18] 2025-10-19 07:54:12,923 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 03:54:18] 2025-10-19 07:54:16,681 | INFO     | PID=2610696 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-19 03:54:18] 2025-10-19 07:54:16,682 | INFO     | .. there are 26 such processes running
[2025-10-19 03:54:18] 2025-10-19 07:54:16,706 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 03:54:18] 2025-10-19 07:54:16,706 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 03:54:18] 2025-10-19 07:54:16,706 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 03:54:18] 2025-10-19 07:54:16,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 03:54:18] 2025-10-19 07:54:16,706 | CRITICAL | thread 'MainThread' is not alive
[2025-10-19 03:54:18] 2025-10-19 07:54:16,707 | INFO     | [monitor] control thread has ended
[2025-10-19 03:54:18] 2025-10-19 07:54:17,450 [wrapper] ==== pilot stdout END ====
[2025-10-19 03:54:18] 2025-10-19 07:54:17,501 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 03:54:18] 2025-10-19 07:54:17,564 [wrapper] pilotpid: 2610696
[2025-10-19 03:54:18] 2025-10-19 07:54:17,647 [wrapper] Pilot exit status: 0
[2025-10-19 03:54:18] 2025-10-19 07:54:17,769 [wrapper] pandaids: 6848040973
[2025-10-19 03:54:18] 2025-10-19 07:54:17,833 [wrapper] cleanup supervisor_pilot 3371363 2610697
[2025-10-19 03:54:18] 2025-10-19 07:54:17,842 [wrapper] Test setup, not cleaning
[2025-10-19 03:54:18] 2025-10-19 07:54:17,861 [wrapper] apfmon messages muted
[2025-10-19 03:54:18] 2025-10-19 07:54:17,880 [wrapper] ==== wrapper stdout END ====
[2025-10-19 03:54:18] 2025-10-19 07:54:17,956 [wrapper] ==== wrapper stderr END ====
[2025-10-19 03:54:18]  *** Error codes and diagnostics ***
[2025-10-19 03:54:18]     "exeErrorCode": 0,
[2025-10-19 03:54:18]     "exeErrorDiag": "",
[2025-10-19 03:54:18]     "pilotErrorCode": 0,
[2025-10-19 03:54:18]     "pilotErrorDiag": "",
[2025-10-19 03:54:18]  *** Listing of results directory ***
[2025-10-19 03:54:18] total 433116
[2025-10-19 03:54:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 18 13:39 pilot3.tar.gz
[2025-10-19 03:54:18] -rwx------. 1 boincer umatlas     36292 Oct 18 13:42 runpilot2-wrapper.sh
[2025-10-19 03:54:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 18 13:42 queuedata.json
[2025-10-19 03:54:18] -rw-r--r--. 1 boincer umatlas       100 Oct 18 22:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 03:54:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 18 22:22 run_atlas
[2025-10-19 03:54:18] -rw-r--r--. 1 boincer umatlas       105 Oct 18 22:22 job.xml
[2025-10-19 03:54:18] -rw-r--r--. 2 boincer umatlas 226673037 Oct 18 22:22 EVNT.46771634._001923.pool.root.1
[2025-10-19 03:54:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 18 22:22 start_atlas.sh
[2025-10-19 03:54:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 18 22:22 shared
[2025-10-19 03:54:18] -rw-r--r--. 2 boincer umatlas    569669 Oct 18 22:22 input.tar.gz
[2025-10-19 03:54:18] -rw-r--r--. 1 boincer umatlas         0 Oct 18 22:22 boinc_lockfile
[2025-10-19 03:54:18] -rw-r--r--. 1 boincer umatlas      2557 Oct 18 22:22 pandaJob.out
[2025-10-19 03:54:18] -rw-------. 1 boincer umatlas    976742 Oct 18 22:23 agis_schedconf.cvmfs.json
[2025-10-19 03:54:18] drwx------. 5 boincer umatlas      4096 Oct 18 22:23 pilot3
[2025-10-19 03:54:18] -rw-r--r--. 1 boincer umatlas      6660 Oct 19 03:49 init_data.xml
[2025-10-19 03:54:18] -rw-------. 1 boincer umatlas 207787880 Oct 19 03:52 HITS.46771637._045617.pool.root.1
[2025-10-19 03:54:18] -rw-r--r--. 1 boincer umatlas       531 Oct 19 03:52 boinc_task_state.xml
[2025-10-19 03:54:18] -rw-------. 1 boincer umatlas      1041 Oct 19 03:53 memory_monitor_summary.json
[2025-10-19 03:54:18] -rw-------. 1 boincer umatlas   1560740 Oct 19 03:53 agis_ddmendpoints.agis.ALL.json
[2025-10-19 03:54:18] -rw-------. 1 boincer umatlas    483877 Oct 19 03:53 log.46771637._045617.job.log.tgz.1
[2025-10-19 03:54:18] -rw-------. 1 boincer umatlas      7822 Oct 19 03:53 heartbeat.json
[2025-10-19 03:54:18] -rw-------. 1 boincer umatlas        95 Oct 19 03:54 pilot_heartbeat.json
[2025-10-19 03:54:18] -rw-------. 1 boincer umatlas       893 Oct 19 03:54 pilotlog.txt
[2025-10-19 03:54:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 19 03:54 boinc_mmap_file
[2025-10-19 03:54:18] -rw-------. 1 boincer umatlas   2092112 Oct 19 03:54 log.46771637._045617.job.log.1
[2025-10-19 03:54:18] -rw-r--r--. 1 boincer umatlas        28 Oct 19 03:54 wrapper_checkpoint.txt
[2025-10-19 03:54:18] -rw-------. 1 boincer umatlas       357 Oct 19 03:54 output.list
[2025-10-19 03:54:18] -rw-r--r--. 1 boincer umatlas       620 Oct 19 03:54 runtime_log
[2025-10-19 03:54:18] -rw-------. 1 boincer umatlas   2590720 Oct 19 03:54 result.tar.gz
[2025-10-19 03:54:18] -rw-r--r--. 1 boincer umatlas      8694 Oct 19 03:54 runtime_log.err
[2025-10-19 03:54:18] -rw-------. 1 boincer umatlas       655 Oct 19 03:54 ipeKDm27PU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmD1xNDmBakdDm.diag
[2025-10-19 03:54:18] -rw-r--r--. 1 boincer umatlas     21157 Oct 19 03:54 stderr.txt
[2025-10-19 03:54:18] HITS file was successfully produced:
[2025-10-19 03:54:18] -rw-------. 1 boincer umatlas 207787880 Oct 19 03:52 shared/HITS.pool.root.1
[2025-10-19 03:54:18]  *** Contents of shared directory: ***
[2025-10-19 03:54:18] total 427396
[2025-10-19 03:54:18] -rw-r--r--. 2 boincer umatlas 226673037 Oct 18 22:22 ATLAS.root_0
[2025-10-19 03:54:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 18 22:22 start_atlas.sh
[2025-10-19 03:54:18] -rw-r--r--. 2 boincer umatlas    569669 Oct 18 22:22 input.tar.gz
[2025-10-19 03:54:18] -rw-------. 1 boincer umatlas 207787880 Oct 19 03:52 HITS.pool.root.1
[2025-10-19 03:54:18] -rw-------. 1 boincer umatlas   2590720 Oct 19 03:54 result.tar.gz
03:54:20 (2606801): run_atlas exited; CPU time 55249.704258
03:54:20 (2606801): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN