Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:38:09 (3616547): wrapper (7.7.26015): starting
12:38:09 (3616547): wrapper: running run_atlas (--nthreads 4)
[2025-10-19 12:38:09] Arguments: --nthreads 4
[2025-10-19 12:38:09] Threads: 4
[2025-10-19 12:38:09] Checking for CVMFS
[2025-10-19 12:38:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 12:38:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 12:38:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 12:38:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 12:38:09] 2.9.2.0 1835514 4925 97800 151884 3 57 29591599 36864000 0 130560 0 4063117 99.991 180845 2113 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-19 12:38:09] CVMFS is ok
[2025-10-19 12:38:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 12:38:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 12:38:09] Further information can be found at the LHC@home message board.
[2025-10-19 12:38:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 12:38:09] Checking for apptainer binary...
[2025-10-19 12:38:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 12:38:09] Running /usr/bin/apptainer --version
[2025-10-19 12:38:09] apptainer version 1.4.1-1.1
[2025-10-19 12:38:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 12:38:09] thA314
[2025-10-19 12:38:09] apptainer works
[2025-10-19 12:38:09] Set ATHENA_PROC_NUMBER=4
[2025-10-19 12:38:09] Set ATHENA_CORE_NUMBER=4
[2025-10-19 12:38:09] Starting ATLAS job with PandaID=6848036657
[2025-10-19 12:38:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 13:59:29]  *** The last 200 lines of the pilot log: ***
[2025-10-19 13:59:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/4e/log.46771637._043585.job.log.tgz.1
[2025-10-19 13:59:29]  workdir=None
[2025-10-19 13:59:29] ]
[2025-10-19 13:59:29] 2025-10-19 11:58:11,855 | INFO     | transferring file log.46771637._043585.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6848036657/log.46771637._043585.job.log.tgz.1 to /local/data/boinc/
[2025-10-19 13:59:29] 2025-10-19 11:58:11,856 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6848036657/log.46771637._043585.job.log.tgz.1 /local/data/boinc/slots/0/log.46771637._0435
[2025-10-19 13:59:29] 2025-10-19 11:58:11,875 | INFO     | adding to output.list: log.46771637._043585.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/4e/log.46771637._043585.job.log.tg
[2025-10-19 13:59:29] 2025-10-19 11:58:11,875 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-19 13:59:29] 2025-10-19 11:58:11,875 | INFO     | summary of transferred files:
[2025-10-19 13:59:29] 2025-10-19 11:58:11,875 | INFO     |  -- lfn=log.46771637._043585.job.log.tgz.1, status_code=0, status=transferred
[2025-10-19 13:59:29] 2025-10-19 11:58:11,875 | INFO     | stage-out finished correctly
[2025-10-19 13:59:29] 2025-10-19 11:58:13,170 | INFO     | time since job start (4796s) is within the limit (172800.0s)
[2025-10-19 13:59:29] 2025-10-19 11:58:15,176 | INFO     | time since job start (4798s) is within the limit (172800.0s)
[2025-10-19 13:59:29] 2025-10-19 11:58:15,414 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-19 13:59:29] 2025-10-19 11:58:17,182 | INFO     | time since job start (4800s) is within the limit (172800.0s)
[2025-10-19 13:59:29] 2025-10-19 11:58:17,760 | WARNING  | process 3626924 can no longer be monitored (due to stat problems) - aborting
[2025-10-19 13:59:29] 2025-10-19 11:58:17,760 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6848036657/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 13:59:29] 2025-10-19 11:58:17,804 | INFO     | number of running child processes to parent process 3626924: 1
[2025-10-19 13:59:29] 2025-10-19 11:58:17,804 | INFO     | maximum number of monitored processes: 6
[2025-10-19 13:59:29] 2025-10-19 11:58:18,250 | INFO     | PID=3620328 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-19 13:59:29] 2025-10-19 11:58:18,266 | INFO     | job 6848036657 has state=finished
[2025-10-19 13:59:29] 2025-10-19 11:58:18,266 | INFO     | preparing for final server update for job 6848036657 in state='finished'
[2025-10-19 13:59:29] 2025-10-19 11:58:18,266 | INFO     | this job has now completed (state=finished)
[2025-10-19 13:59:29] 2025-10-19 11:58:18,266 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-19 13:59:29] 2025-10-19 11:58:18,266 | INFO     | log transfer has been attempted: DONE
[2025-10-19 13:59:29] 2025-10-19 11:58:18,266 | INFO     | job 6848036657 has finished - writing final server update
[2025-10-19 13:59:29] 2025-10-19 11:58:18,267 | INFO     | total number of processed events: 400 (read)
[2025-10-19 13:59:29] 2025-10-19 11:58:18,268 | INFO     | executing command: lscpu
[2025-10-19 13:59:29] 2025-10-19 11:58:18,289 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-19 13:59:29] 2025-10-19 11:58:19,250 | INFO     | time since job start (4802s) is within the limit (172800.0s)
[2025-10-19 13:59:29] 2025-10-19 11:58:20,307 | INFO     | monitor loop #369: job 0:6848036657 is in state 'finished'
[2025-10-19 13:59:29] 2025-10-19 11:58:20,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 13:59:29] 2025-10-19 11:58:21,255 | INFO     | time since job start (4804s) is within the limit (172800.0s)
[2025-10-19 13:59:29] 2025-10-19 11:58:22,810 | INFO     | monitor loop #370: job 0:6848036657 is in state 'finished'
[2025-10-19 13:59:29] 2025-10-19 11:58:22,810 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 13:59:29] 2025-10-19 11:58:23,059 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-19 13:59:29] 2025-10-19 11:58:23,061 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3230.2275625000007
[2025-10-19 13:59:29] 2025-10-19 11:58:23,063 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6848036657/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 13:59:29] 2025-10-19 11:58:23,063 | INFO     | extracted standard info from prmon json
[2025-10-19 13:59:29] 2025-10-19 11:58:23,063 | INFO     | extracted standard memory fields from prmon json
[2025-10-19 13:59:29] 2025-10-19 11:58:23,063 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-19 13:59:29] 2025-10-19 11:58:23,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-19 13:59:29] 2025-10-19 11:58:23,063 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-19 13:59:29] 2025-10-19 11:58:23,064 | INFO     | fitting pss+swap vs Time
[2025-10-19 13:59:29] 2025-10-19 11:58:23,064 | INFO     | sum of square deviations: 115715658.0
[2025-10-19 13:59:29] 2025-10-19 11:58:23,064 | INFO     | sum of deviations: -7839267502.0
[2025-10-19 13:59:29] 2025-10-19 11:58:23,064 | INFO     | mean x: 1760872791.5
[2025-10-19 13:59:29] 2025-10-19 11:58:23,064 | INFO     | mean y: 2472215.5555555555
[2025-10-19 13:59:29] 2025-10-19 11:58:23,064 | INFO     | -- intersect: 119294477188.31361
[2025-10-19 13:59:29] 2025-10-19 11:58:23,064 | INFO     | intersect: 119294477188.31361
[2025-10-19 13:59:29] 2025-10-19 11:58:23,064 | INFO     | chi2: 0.06359027528752907
[2025-10-19 13:59:29] 2025-10-19 11:58:23,064 | INFO     | -- intersect: 119294477188.31361
[2025-10-19 13:59:29] 2025-10-19 11:58:23,064 | INFO     | current memory leak: -67.75 B/s (using 72 data points, chi2=0.06)
[2025-10-19 13:59:29] 2025-10-19 11:58:23,065 | INFO     | could have reported an average CPU frequency of 3637 MHz (6 samples)
[2025-10-19 13:59:29] 2025-10-19 11:58:23,065 | INFO     | ..............................
[2025-10-19 13:59:29] 2025-10-19 11:58:23,065 | INFO     | . Timing measurements:
[2025-10-19 13:59:29] 2025-10-19 11:58:23,065 | INFO     | . get job = 0 s
[2025-10-19 13:59:29] 2025-10-19 11:58:23,065 | INFO     | . initial setup = 1 s
[2025-10-19 13:59:29] 2025-10-19 11:58:23,065 | INFO     | . payload setup = 4 s
[2025-10-19 13:59:29] 2025-10-19 11:58:23,065 | INFO     | . stage-in = 0 s
[2025-10-19 13:59:29] 2025-10-19 11:58:23,065 | INFO     | . payload execution = 4771 s
[2025-10-19 13:59:29] 2025-10-19 11:58:23,065 | INFO     | . stage-out = 0 s
[2025-10-19 13:59:29] 2025-10-19 11:58:23,065 | INFO     | . log creation = 0 s
[2025-10-19 13:59:29] 2025-10-19 11:58:23,065 | INFO     | ..............................
[2025-10-19 13:59:29] 2025-10-19 11:58:23,225 | INFO     | 
[2025-10-19 13:59:29] 2025-10-19 11:58:23,225 | INFO     | job summary report
[2025-10-19 13:59:29] 2025-10-19 11:58:23,225 | INFO     | --------------------------------------------------
[2025-10-19 13:59:29] 2025-10-19 11:58:23,225 | INFO     | PanDA job id: 6848036657
[2025-10-19 13:59:29] 2025-10-19 11:58:23,225 | INFO     | task id: 46771637
[2025-10-19 13:59:29] 2025-10-19 11:58:23,225 | INFO     | errors: (none)
[2025-10-19 13:59:29] 2025-10-19 11:58:23,225 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-19 13:59:29] 2025-10-19 11:58:23,225 | INFO     | pilot state: finished 
[2025-10-19 13:59:29] 2025-10-19 11:58:23,225 | INFO     | transexitcode: 0
[2025-10-19 13:59:29] 2025-10-19 11:58:23,225 | INFO     | exeerrorcode: 0
[2025-10-19 13:59:29] 2025-10-19 11:58:23,226 | INFO     | exeerrordiag: 
[2025-10-19 13:59:29] 2025-10-19 11:58:23,226 | INFO     | exitcode: 0
[2025-10-19 13:59:29] 2025-10-19 11:58:23,226 | INFO     | exitmsg: OK
[2025-10-19 13:59:29] 2025-10-19 11:58:23,226 | INFO     | cpuconsumptiontime: 18131 s
[2025-10-19 13:59:29] 2025-10-19 11:58:23,226 | INFO     | nevents: 400
[2025-10-19 13:59:29] 2025-10-19 11:58:23,226 | INFO     | neventsw: 0
[2025-10-19 13:59:29] 2025-10-19 11:58:23,226 | INFO     | pid: 3626924
[2025-10-19 13:59:29] 2025-10-19 11:58:23,226 | INFO     | pgrp: 3626924
[2025-10-19 13:59:29] 2025-10-19 11:58:23,226 | INFO     | corecount: 4
[2025-10-19 13:59:29] 2025-10-19 11:58:23,226 | INFO     | event service: False
[2025-10-19 13:59:29] 2025-10-19 11:58:23,226 | INFO     | sizes: {0: 2348881, 3: 2349143, 11: 2349171, 4779: 2375527, 4780: 2384531, 4783: 2384587, 4791: 2384909}
[2025-10-19 13:59:29] 2025-10-19 11:58:23,226 | INFO     | --------------------------------------------------
[2025-10-19 13:59:29] 2025-10-19 11:58:23,226 | INFO     | 
[2025-10-19 13:59:29] 2025-10-19 11:58:23,226 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-19 13:59:29] 2025-10-19 11:58:23,247 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,247 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,247 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,247 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,247 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,247 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,247 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,247 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,247 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,247 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,247 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,247 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,248 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,248 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,248 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,248 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,248 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,248 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-19 13:59:29] 2025-10-19 11:58:23,248 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,248 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-19 13:59:29] 2025-10-19 11:58:23,248 | INFO     | job 6848036657 has completed (purged errors)
[2025-10-19 13:59:29] 2025-10-19 11:58:23,248 | INFO     | overall cleanup function is called
[2025-10-19 13:59:29] 2025-10-19 11:58:24,251 | INFO     | --- collectZombieJob: --- 10, [3626924]
[2025-10-19 13:59:29] 2025-10-19 11:58:24,251 | INFO     | zombie collector waiting for pid 3626924
[2025-10-19 13:59:29] 2025-10-19 11:58:24,252 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-19 13:59:29] 2025-10-19 11:58:24,252 | INFO     | collected zombie processes
[2025-10-19 13:59:29] 2025-10-19 11:58:24,252 | INFO     | will attempt to kill all subprocesses of pid=3626924
[2025-10-19 13:59:29] 2025-10-19 11:58:24,301 | INFO     | process IDs to be killed: [3626924] (in reverse order)
[2025-10-19 13:59:29] 2025-10-19 11:58:24,337 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 13:59:29] 2025-10-19 11:58:24,337 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 13:59:29] 2025-10-19 11:58:24,339 | INFO     | did not find any defunct processes belonging to 3626924
[2025-10-19 13:59:29] 2025-10-19 11:58:24,341 | INFO     | did not find any defunct processes belonging to 3626924
[2025-10-19 13:59:29] 2025-10-19 11:58:24,341 | INFO     | ready for new job
[2025-10-19 13:59:29] 2025-10-19 11:58:24,341 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 13:59:29] 2025-10-19 11:58:24,342 | INFO     | ***************************************
[2025-10-19 13:59:29] 2025-10-19 11:58:24,342 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 13:59:29] 2025-10-19 11:58:24,342 | INFO     | ***************************************
[2025-10-19 13:59:29] 2025-10-19 11:58:24,342 | INFO     | 
[2025-10-19 13:59:29] 2025-10-19 11:58:24,342 | INFO     | architecture information:
[2025-10-19 13:59:29] 2025-10-19 11:58:24,343 | INFO     | executing command: cat /etc/os-release
[2025-10-19 13:59:29] 2025-10-19 11:58:24,357 | INFO     | cat /etc/os-release:
[2025-10-19 13:59:29] NAME="CentOS Linux"
[2025-10-19 13:59:29] VERSION="7 (Core)"
[2025-10-19 13:59:29] ID="centos"
[2025-10-19 13:59:29] ID_LIKE="rhel fedora"
[2025-10-19 13:59:29] VERSION_ID="7"
[2025-10-19 13:59:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 13:59:29] ANSI_COLOR="0;31"
[2025-10-19 13:59:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 13:59:29] HOME_URL="https://www.centos.org/"
[2025-10-19 13:59:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 13:59:29] 
[2025-10-19 13:59:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 13:59:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 13:59:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 13:59:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 13:59:29] 
[2025-10-19 13:59:29] 2025-10-19 11:58:24,357 | INFO     | ***************************************
[2025-10-19 13:59:29] 2025-10-19 11:58:24,860 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-19 13:59:29] 2025-10-19 11:58:24,879 | INFO     | sufficient remaining disk space (230845054976 B)
[2025-10-19 13:59:29] 2025-10-19 11:58:24,879 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 13:59:29] 2025-10-19 11:58:24,879 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 13:59:29] 2025-10-19 11:58:24,879 | INFO     | update_server=False
[2025-10-19 13:59:29] 2025-10-19 11:58:24,879 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 13:59:29] 2025-10-19 11:58:24,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 13:59:29] 2025-10-19 11:58:24,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 13:59:29] 2025-10-19 11:58:25,314 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-19 13:59:29] 2025-10-19 11:58:25,314 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-19 13:59:29] 2025-10-19 11:58:25,314 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 13:59:29] 2025-10-19 11:58:25,314 | INFO     | will abort loop
[2025-10-19 13:59:29] 2025-10-19 11:58:25,640 | INFO     | all data control threads have been joined
[2025-10-19 13:59:29] 2025-10-19 11:58:25,885 | INFO     | [job] retrieve thread has finished
[2025-10-19 13:59:29] 2025-10-19 11:58:25,885 | INFO     | [job] queue monitor thread has finished
[2025-10-19 13:59:29] 2025-10-19 11:58:25,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 13:59:29] 2025-10-19 11:58:25,985 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 13:59:29] 2025-10-19 11:58:26,081 | INFO     | [payload] failed_post thread has finished
[2025-10-19 13:59:29] 2025-10-19 11:58:26,144 | INFO     | all payload control threads have been joined
[2025-10-19 13:59:29] 2025-10-19 11:58:26,319 | INFO     | [job] job monitor thread has finished
[2025-10-19 13:59:29] 2025-10-19 11:58:26,497 | INFO     | all job control threads have been joined
[2025-10-19 13:59:29] 2025-10-19 11:58:26,548 | INFO     | [data] copytool_in thread has finished
[2025-10-19 13:59:29] 2025-10-19 11:58:26,567 | INFO     | [payload] validate_post thread has finished
[2025-10-19 13:59:29] 2025-10-19 11:58:26,646 | INFO     | [data] control thread has finished
[2025-10-19 13:59:29] 2025-10-19 11:58:26,938 | INFO     | [data] copytool_out thread has finished
[2025-10-19 13:59:29] 2025-10-19 11:58:26,954 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 13:59:29] 2025-10-19 11:58:27,149 | INFO     | [payload] control thread has finished
[2025-10-19 13:59:29] 2025-10-19 11:58:27,233 | INFO     | [job] validate thread has finished
[2025-10-19 13:59:29] 2025-10-19 11:58:27,338 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 13:59:29] 2025-10-19 11:58:27,503 | INFO     | [job] control thread has finished
[2025-10-19 13:59:29] 2025-10-19 11:58:29,973 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 13:59:29] 2025-10-19 11:58:35,163 | INFO     | job.realtimelogging is not enabled
[2025-10-19 13:59:29] 2025-10-19 11:58:36,168 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 13:59:29] 2025-10-19 11:58:54,378 | INFO     | PID=3620328 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-19 13:59:29] 2025-10-19 11:58:54,378 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 13:59:29] 2025-10-19 11:58:54,378 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 13:59:29] 2025-10-19 11:58:54,378 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 13:59:29] 2025-10-19 11:59:22,907 | INFO     | [monitor] cgroup control has ended
[2025-10-19 13:59:29] 2025-10-19 11:59:23,985 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140594335942464)>', '<ExcThread(monitor, started 140593229440768)>']
[2025-10-19 13:59:29] 2025-10-19 11:59:24,536 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 13:59:29] 2025-10-19 11:59:24,536 | INFO     | [monitor] control thread has ended
[2025-10-19 13:59:29] 2025-10-19 11:59:29,010 | INFO     | all workflow threads have been joined
[2025-10-19 13:59:29] 2025-10-19 11:59:29,010 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 13:59:29] 2025-10-19 11:59:29,011 | INFO     | traces error code: 0
[2025-10-19 13:59:29] 2025-10-19 11:59:29,011 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 13:59:29] 2025-10-19 11:59:29,091 [wrapper] ==== pilot stdout END ====
[2025-10-19 13:59:29] 2025-10-19 11:59:29,095 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 13:59:29] 2025-10-19 11:59:29,099 [wrapper] pilotpid: 3620328
[2025-10-19 13:59:29] 2025-10-19 11:59:29,104 [wrapper] Pilot exit status: 0
[2025-10-19 13:59:29] 2025-10-19 11:59:29,116 [wrapper] pandaids: 6848036657
[2025-10-19 13:59:29] 2025-10-19 11:59:29,141 [wrapper] cleanup supervisor_pilot 3643439 3620329
[2025-10-19 13:59:29] 2025-10-19 11:59:29,145 [wrapper] Test setup, not cleaning
[2025-10-19 13:59:29] 2025-10-19 11:59:29,150 [wrapper] apfmon messages muted
[2025-10-19 13:59:29] 2025-10-19 11:59:29,153 [wrapper] ==== wrapper stdout END ====
[2025-10-19 13:59:29] 2025-10-19 11:59:29,157 [wrapper] ==== wrapper stderr END ====
[2025-10-19 13:59:29]  *** Error codes and diagnostics ***
[2025-10-19 13:59:29]     "exeErrorCode": 0,
[2025-10-19 13:59:29]     "exeErrorDiag": "",
[2025-10-19 13:59:29]     "pilotErrorCode": 0,
[2025-10-19 13:59:29]     "pilotErrorDiag": "",
[2025-10-19 13:59:29]  *** Listing of results directory ***
[2025-10-19 13:59:29] total 432544
[2025-10-19 13:59:29] -rw-r--r-- 1 boinc boinc    557409 Oct 18 14:53 pilot3.tar.gz
[2025-10-19 13:59:29] -rw-r--r-- 1 boinc boinc      5112 Oct 18 15:08 queuedata.json
[2025-10-19 13:59:29] -rwx------ 1 boinc boinc     36292 Oct 18 15:08 runpilot2-wrapper.sh
[2025-10-19 13:59:29] -rw-r--r-- 1 boinc boinc       100 Oct 19 12:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 13:59:29] -rwxr-xr-x 1 boinc boinc      7986 Oct 19 12:38 run_atlas
[2025-10-19 13:59:29] -rw-r--r-- 1 boinc boinc       105 Oct 19 12:38 job.xml
[2025-10-19 13:59:29] -rw-r--r-- 2 boinc boinc 226378138 Oct 19 12:38 EVNT.46771634._001839.pool.root.1
[2025-10-19 13:59:29] -rw-r--r-- 2 boinc boinc    569677 Oct 19 12:38 input.tar.gz
[2025-10-19 13:59:29] -rw-r--r-- 2 boinc boinc     15120 Oct 19 12:38 start_atlas.sh
[2025-10-19 13:59:29] drwxrwx--x 2 boinc boinc      4096 Oct 19 12:38 shared
[2025-10-19 13:59:29] -rw-r--r-- 1 boinc boinc         0 Oct 19 12:38 boinc_setup_complete
[2025-10-19 13:59:29] -rw-r--r-- 1 boinc boinc      6378 Oct 19 12:38 init_data.xml
[2025-10-19 13:59:29] -rw-r--r-- 1 boinc boinc         0 Oct 19 12:38 boinc_lockfile
[2025-10-19 13:59:29] -rw-r--r-- 1 boinc boinc      2557 Oct 19 12:38 pandaJob.out
[2025-10-19 13:59:29] -rw------- 1 boinc boinc    976750 Oct 19 12:38 agis_schedconf.cvmfs.json
[2025-10-19 13:59:29] -rw------- 1 boinc boinc   1560740 Oct 19 12:38 agis_ddmendpoints.agis.ALL.json
[2025-10-19 13:59:29] drwx------ 5 boinc boinc      4096 Oct 19 12:38 pilot3
[2025-10-19 13:59:29] -rw------- 1 boinc boinc 210669618 Oct 19 13:57 HITS.46771637._043585.pool.root.1
[2025-10-19 13:59:29] -rw-r--r-- 1 boinc boinc       529 Oct 19 13:58 boinc_task_state.xml
[2025-10-19 13:59:29] -rw------- 1 boinc boinc      1019 Oct 19 13:58 memory_monitor_summary.json
[2025-10-19 13:59:29] -rw------- 1 boinc boinc    276033 Oct 19 13:58 log.46771637._043585.job.log.tgz.1
[2025-10-19 13:59:29] -rw------- 1 boinc boinc      7758 Oct 19 13:58 heartbeat.json
[2025-10-19 13:59:29] -rw------- 1 boinc boinc        95 Oct 19 13:58 pilot_heartbeat.json
[2025-10-19 13:59:29] -rw-r--r-- 1 boinc boinc      8192 Oct 19 13:59 boinc_mmap_file
[2025-10-19 13:59:29] -rw-r--r-- 1 boinc boinc        27 Oct 19 13:59 wrapper_checkpoint.txt
[2025-10-19 13:59:29] -rw------- 1 boinc boinc      5010 Oct 19 13:59 pilotlog.txt
[2025-10-19 13:59:29] -rw------- 1 boinc boinc    706703 Oct 19 13:59 log.46771637._043585.job.log.1
[2025-10-19 13:59:29] -rw------- 1 boinc boinc       357 Oct 19 13:59 output.list
[2025-10-19 13:59:29] -rw-r--r-- 1 boinc boinc       620 Oct 19 13:59 runtime_log
[2025-10-19 13:59:29] -rw------- 1 boinc boinc   1003520 Oct 19 13:59 result.tar.gz
[2025-10-19 13:59:29] -rw-r--r-- 1 boinc boinc      8777 Oct 19 13:59 runtime_log.err
[2025-10-19 13:59:29] -rw------- 1 boinc boinc       658 Oct 19 13:59 ZKFODmiqLU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBHxNDmGlB5Oo.diag
[2025-10-19 13:59:29] -rw-r--r-- 1 boinc boinc     22365 Oct 19 13:59 stderr.txt
[2025-10-19 13:59:29] HITS file was successfully produced:
[2025-10-19 13:59:29] -rw------- 1 boinc boinc 210669618 Oct 19 13:57 shared/HITS.pool.root.1
[2025-10-19 13:59:29]  *** Contents of shared directory: ***
[2025-10-19 13:59:29] total 428376
[2025-10-19 13:59:29] -rw-r--r-- 2 boinc boinc 226378138 Oct 19 12:38 ATLAS.root_0
[2025-10-19 13:59:29] -rw-r--r-- 2 boinc boinc    569677 Oct 19 12:38 input.tar.gz
[2025-10-19 13:59:29] -rw-r--r-- 2 boinc boinc     15120 Oct 19 12:38 start_atlas.sh
[2025-10-19 13:59:29] -rw------- 1 boinc boinc 210669618 Oct 19 13:57 HITS.pool.root.1
[2025-10-19 13:59:29] -rw------- 1 boinc boinc   1003520 Oct 19 13:59 result.tar.gz
13:59:30 (3616547): run_atlas exited; CPU time 18149.736179
13:59:30 (3616547): called boinc_finish(0)

</stderr_txt>
]]>

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