Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:57:42 (1742376): wrapper (7.7.26015): starting
03:57:42 (1742376): wrapper: running run_atlas (--nthreads 4)
[2025-10-19 03:57:42] Arguments: --nthreads 4
[2025-10-19 03:57:42] Threads: 4
[2025-10-19 03:57:42] Checking for CVMFS
[2025-10-19 03:57:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 03:57:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 03:57:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 03:57:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 03:57:42] 2.9.2.0 328193 4279 96664 151870 3 57 24701703 36864001 0 130560 0 3703119 99.992 153170 2736 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-19 03:57:42] CVMFS is ok
[2025-10-19 03:57:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 03:57:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 03:57:42] Further information can be found at the LHC@home message board.
[2025-10-19 03:57:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 03:57:42] Checking for apptainer binary...
[2025-10-19 03:57:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 03:57:42] Running /usr/bin/apptainer --version
[2025-10-19 03:57:42] apptainer version 1.4.1-1.1
[2025-10-19 03:57:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 03:57:42] cosA131b
[2025-10-19 03:57:42] apptainer works
[2025-10-19 03:57:43] Set ATHENA_PROC_NUMBER=4
[2025-10-19 03:57:43] Set ATHENA_CORE_NUMBER=4
[2025-10-19 03:57:43] Starting ATLAS job with PandaID=6850265805
[2025-10-19 03:57:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 04:55:02]  *** The last 200 lines of the pilot log: ***
[2025-10-19 04:55:02] 2025-10-19 02:54:21,124 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-19 04:55:02] 2025-10-19 02:54:21,124 | INFO     | summary of transferred files:
[2025-10-19 04:55:02] 2025-10-19 02:54:21,124 | INFO     |  -- lfn=log.46808902._002575.job.log.tgz.1, status_code=0, status=transferred
[2025-10-19 04:55:02] 2025-10-19 02:54:21,124 | INFO     | stage-out finished correctly
[2025-10-19 04:55:02] 2025-10-19 02:54:21,509 | INFO     | time since job start (3391s) is within the limit (172800.0s)
[2025-10-19 04:55:02] 2025-10-19 02:54:23,515 | INFO     | time since job start (3393s) is within the limit (172800.0s)
[2025-10-19 04:55:02] 2025-10-19 02:54:23,836 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-19 04:55:02] 2025-10-19 02:54:25,521 | INFO     | time since job start (3395s) is within the limit (172800.0s)
[2025-10-19 04:55:02] 2025-10-19 02:54:25,940 | INFO     | job 6850265805 has state=finished
[2025-10-19 04:55:02] 2025-10-19 02:54:25,940 | INFO     | preparing for final server update for job 6850265805 in state='finished'
[2025-10-19 04:55:02] 2025-10-19 02:54:25,940 | INFO     | this job has now completed (state=finished)
[2025-10-19 04:55:02] 2025-10-19 02:54:25,941 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-19 04:55:02] 2025-10-19 02:54:25,941 | INFO     | log transfer has been attempted: DONE
[2025-10-19 04:55:02] 2025-10-19 02:54:25,941 | INFO     | job 6850265805 has finished - writing final server update
[2025-10-19 04:55:02] 2025-10-19 02:54:25,941 | INFO     | total number of processed events: 400 (read)
[2025-10-19 04:55:02] 2025-10-19 02:54:25,941 | INFO     | executing command: lscpu
[2025-10-19 04:55:02] 2025-10-19 02:54:25,962 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-19 04:55:02] 2025-10-19 02:54:27,526 | INFO     | time since job start (3397s) is within the limit (172800.0s)
[2025-10-19 04:55:02] 2025-10-19 02:54:29,531 | INFO     | time since job start (3399s) is within the limit (172800.0s)
[2025-10-19 04:55:02] 2025-10-19 02:54:30,103 | WARNING  | process 1752765 can no longer be monitored (due to stat problems) - aborting
[2025-10-19 04:55:02] 2025-10-19 02:54:30,103 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6850265805/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 04:55:02] 2025-10-19 02:54:30,104 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6850265805/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 04:55:02] 2025-10-19 02:54:30,104 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-19 04:55:02] 2025-10-19 02:54:30,106 | WARNING  | maxPSS not found in memory monitor output
[2025-10-19 04:55:02] 2025-10-19 02:54:30,106 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2555190 B
[2025-10-19 04:55:02] 2025-10-19 02:54:30,106 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15629 B
[2025-10-19 04:55:02] 2025-10-19 02:54:30,106 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-19 04:55:02] 2025-10-19 02:54:30,953 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-19 04:55:02] 2025-10-19 02:54:30,958 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3726.8972500000004
[2025-10-19 04:55:02] 2025-10-19 02:54:30,960 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6850265805/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 04:55:02] 2025-10-19 02:54:30,960 | INFO     | extracted standard info from prmon json
[2025-10-19 04:55:02] 2025-10-19 02:54:30,961 | INFO     | extracted standard memory fields from prmon json
[2025-10-19 04:55:02] 2025-10-19 02:54:30,961 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-19 04:55:02] 2025-10-19 02:54:30,962 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-19 04:55:02] 2025-10-19 02:54:30,962 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-19 04:55:02] 2025-10-19 02:54:30,963 | INFO     | fitting pss+swap vs Time
[2025-10-19 04:55:02] 2025-10-19 02:54:30,963 | INFO     | sum of square deviations: 36465800.0
[2025-10-19 04:55:02] 2025-10-19 02:54:30,963 | INFO     | sum of deviations: -2628667144.0
[2025-10-19 04:55:02] 2025-10-19 02:54:30,963 | INFO     | mean x: 1760840863.0
[2025-10-19 04:55:02] 2025-10-19 02:54:30,963 | INFO     | mean y: 2424296.4285714286
[2025-10-19 04:55:02] 2025-10-19 02:54:30,963 | INFO     | -- intersect: 126934084163.50143
[2025-10-19 04:55:02] 2025-10-19 02:54:30,963 | INFO     | intersect: 126934084163.50143
[2025-10-19 04:55:02] 2025-10-19 02:54:30,963 | INFO     | chi2: 0.09486931816144732
[2025-10-19 04:55:02] 2025-10-19 02:54:30,963 | INFO     | -- intersect: 126934084163.50143
[2025-10-19 04:55:02] 2025-10-19 02:54:30,963 | INFO     | current memory leak: -72.09 B/s (using 49 data points, chi2=0.09)
[2025-10-19 04:55:02] 2025-10-19 02:54:30,963 | INFO     | could have reported an average CPU frequency of 3687 MHz (5 samples)
[2025-10-19 04:55:02] 2025-10-19 02:54:30,964 | INFO     | ..............................
[2025-10-19 04:55:02] 2025-10-19 02:54:30,964 | INFO     | . Timing measurements:
[2025-10-19 04:55:02] 2025-10-19 02:54:30,964 | INFO     | . get job = 0 s
[2025-10-19 04:55:02] 2025-10-19 02:54:30,964 | INFO     | . initial setup = 1 s
[2025-10-19 04:55:02] 2025-10-19 02:54:30,964 | INFO     | . payload setup = 4 s
[2025-10-19 04:55:02] 2025-10-19 02:54:30,964 | INFO     | . stage-in = 0 s
[2025-10-19 04:55:02] 2025-10-19 02:54:30,964 | INFO     | . payload execution = 3370 s
[2025-10-19 04:55:02] 2025-10-19 02:54:30,964 | INFO     | . stage-out = 0 s
[2025-10-19 04:55:02] 2025-10-19 02:54:30,964 | INFO     | . log creation = 0 s
[2025-10-19 04:55:02] 2025-10-19 02:54:30,964 | INFO     | ..............................
[2025-10-19 04:55:02] 2025-10-19 02:54:30,978 | INFO     | sufficient remaining disk space (331497865216 B)
[2025-10-19 04:55:02] 2025-10-19 02:54:30,994 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-19 04:55:02] 2025-10-19 02:54:31,005 | INFO     | 
[2025-10-19 04:55:02] 2025-10-19 02:54:31,005 | INFO     | job summary report
[2025-10-19 04:55:02] 2025-10-19 02:54:31,005 | INFO     | --------------------------------------------------
[2025-10-19 04:55:02] 2025-10-19 02:54:31,005 | INFO     | PanDA job id: 6850265805
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | task id: 46808902
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | errors: (none)
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | pilot state: finished 
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | transexitcode: 0
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | exeerrorcode: 0
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | exeerrordiag: 
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | exitcode: 0
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | exitmsg: OK
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | cpuconsumptiontime: 12575 s
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | nevents: 400
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | neventsw: 0
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | pid: 1752765
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | pgrp: 1752765
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | corecount: 4
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | event service: False
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | sizes: {0: 2348681, 1: 2348880, 4: 2349142, 11: 2349170, 3375: 2374858, 3376: 2383862, 3378: 2384046, 3385: 2384272}
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | --------------------------------------------------
[2025-10-19 04:55:02] 2025-10-19 02:54:31,006 | INFO     | 
[2025-10-19 04:55:02] 2025-10-19 02:54:31,007 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-19 04:55:02] 2025-10-19 02:54:31,010 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6850265805: 2844084 B (within 2537553920 B limit)
[2025-10-19 04:55:02] 2025-10-19 02:54:31,010 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6850265805/HITS.46808902._002575.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-19 04:55:02] 2025-10-19 02:54:31,011 | INFO     | total size of present files: 0 B (workdir size: 2844084 B)
[2025-10-19 04:55:02] 2025-10-19 02:54:31,011 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6850265805/HITS.46808902._002575.pool.root.1 since it does not exist
[2025-10-19 04:55:02] 2025-10-19 02:54:31,026 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,026 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,026 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,026 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,026 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,026 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,026 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,026 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,026 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,026 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,026 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,027 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,027 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,027 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-19 04:55:02] 2025-10-19 02:54:31,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,027 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-19 04:55:02] 2025-10-19 02:54:31,027 | INFO     | job 6850265805 has completed (purged errors)
[2025-10-19 04:55:02] 2025-10-19 02:54:31,027 | INFO     | overall cleanup function is called
[2025-10-19 04:55:02] 2025-10-19 02:54:31,058 | INFO     | number of running child processes to parent process 1752765: 1
[2025-10-19 04:55:02] 2025-10-19 02:54:31,058 | INFO     | maximum number of monitored processes: 6
[2025-10-19 04:55:02] 2025-10-19 02:54:31,059 | INFO     | aborting job monitoring since job object (job id=6850265805) has expired
[2025-10-19 04:55:02] 2025-10-19 02:54:32,034 | INFO     | --- collectZombieJob: --- 10, [1752765]
[2025-10-19 04:55:02] 2025-10-19 02:54:32,035 | INFO     | zombie collector waiting for pid 1752765
[2025-10-19 04:55:02] 2025-10-19 02:54:32,035 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-19 04:55:02] 2025-10-19 02:54:32,035 | INFO     | collected zombie processes
[2025-10-19 04:55:02] 2025-10-19 02:54:32,035 | INFO     | will attempt to kill all subprocesses of pid=1752765
[2025-10-19 04:55:02] 2025-10-19 02:54:32,078 | INFO     | process IDs to be killed: [1752765] (in reverse order)
[2025-10-19 04:55:02] 2025-10-19 02:54:32,111 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 04:55:02] 2025-10-19 02:54:32,111 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 04:55:02] 2025-10-19 02:54:32,113 | INFO     | did not find any defunct processes belonging to 1752765
[2025-10-19 04:55:02] 2025-10-19 02:54:32,114 | INFO     | did not find any defunct processes belonging to 1752765
[2025-10-19 04:55:02] 2025-10-19 02:54:32,114 | INFO     | ready for new job
[2025-10-19 04:55:02] 2025-10-19 02:54:32,114 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 04:55:02] 2025-10-19 02:54:32,115 | INFO     | ***************************************
[2025-10-19 04:55:02] 2025-10-19 02:54:32,115 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 04:55:02] 2025-10-19 02:54:32,115 | INFO     | ***************************************
[2025-10-19 04:55:02] 2025-10-19 02:54:32,115 | INFO     | 
[2025-10-19 04:55:02] 2025-10-19 02:54:32,115 | INFO     | architecture information:
[2025-10-19 04:55:02] 2025-10-19 02:54:32,115 | INFO     | executing command: cat /etc/os-release
[2025-10-19 04:55:02] 2025-10-19 02:54:32,129 | INFO     | cat /etc/os-release:
[2025-10-19 04:55:02] NAME="CentOS Linux"
[2025-10-19 04:55:02] VERSION="7 (Core)"
[2025-10-19 04:55:02] ID="centos"
[2025-10-19 04:55:02] ID_LIKE="rhel fedora"
[2025-10-19 04:55:02] VERSION_ID="7"
[2025-10-19 04:55:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 04:55:02] ANSI_COLOR="0;31"
[2025-10-19 04:55:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 04:55:02] HOME_URL="https://www.centos.org/"
[2025-10-19 04:55:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 04:55:02] 
[2025-10-19 04:55:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 04:55:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 04:55:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 04:55:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 04:55:02] 
[2025-10-19 04:55:02] 2025-10-19 02:54:32,130 | INFO     | ***************************************
[2025-10-19 04:55:02] 2025-10-19 02:54:32,633 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-19 04:55:02] 2025-10-19 02:54:32,651 | INFO     | sufficient remaining disk space (331501010944 B)
[2025-10-19 04:55:02] 2025-10-19 02:54:32,652 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 04:55:02] 2025-10-19 02:54:32,652 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 04:55:02] 2025-10-19 02:54:32,652 | INFO     | update_server=False
[2025-10-19 04:55:02] 2025-10-19 02:54:32,652 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 04:55:02] 2025-10-19 02:54:32,652 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 04:55:02] 2025-10-19 02:54:32,652 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 04:55:02] 2025-10-19 02:54:32,652 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 04:55:02] 2025-10-19 02:54:32,652 | INFO     | aborting loop
[2025-10-19 04:55:02] 2025-10-19 02:54:33,059 | INFO     | all data control threads have been joined
[2025-10-19 04:55:02] 2025-10-19 02:54:33,062 | INFO     | all payload control threads have been joined
[2025-10-19 04:55:02] 2025-10-19 02:54:33,404 | INFO     | all job control threads have been joined
[2025-10-19 04:55:02] 2025-10-19 02:54:33,657 | INFO     | [job] retrieve thread has finished
[2025-10-19 04:55:02] 2025-10-19 02:54:33,658 | INFO     | [job] queue monitor thread has finished
[2025-10-19 04:55:02] 2025-10-19 02:54:33,658 | INFO     | [job] job monitor thread has finished
[2025-10-19 04:55:02] 2025-10-19 02:54:34,064 | INFO     | [data] control thread has finished
[2025-10-19 04:55:02] 2025-10-19 02:54:34,065 | INFO     | [payload] control thread has finished
[2025-10-19 04:55:02] 2025-10-19 02:54:34,114 | INFO     | [payload] validate_post thread has finished
[2025-10-19 04:55:02] 2025-10-19 02:54:34,289 | INFO     | [job] validate thread has finished
[2025-10-19 04:55:02] 2025-10-19 02:54:34,300 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 04:55:02] 2025-10-19 02:54:34,386 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 04:55:02] 2025-10-19 02:54:34,410 | INFO     | [job] control thread has finished
[2025-10-19 04:55:02] 2025-10-19 02:54:34,457 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 04:55:02] 2025-10-19 02:54:34,658 | INFO     | [data] copytool_out thread has finished
[2025-10-19 04:55:02] 2025-10-19 02:54:34,710 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 04:55:02] 2025-10-19 02:54:34,897 | INFO     | [data] copytool_in thread has finished
[2025-10-19 04:55:02] 2025-10-19 02:54:35,248 | INFO     | [payload] failed_post thread has finished
[2025-10-19 04:55:02] 2025-10-19 02:54:38,393 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 04:55:02] 2025-10-19 02:54:43,642 | INFO     | job.realtimelogging is not enabled
[2025-10-19 04:55:02] 2025-10-19 02:54:44,648 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 04:55:02] 2025-10-19 02:54:54,771 | INFO     | [monitor] cgroup control has ended
[2025-10-19 04:55:02] 2025-10-19 02:54:56,063 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140552352220992)>', '<ExcThread(monitor, started 140551546443520)>']
[2025-10-19 04:55:02] 2025-10-19 02:55:01,089 | INFO     | all workflow threads have been joined
[2025-10-19 04:55:02] 2025-10-19 02:55:01,089 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 04:55:02] 2025-10-19 02:55:01,090 | INFO     | traces error code: 0
[2025-10-19 04:55:02] 2025-10-19 02:55:01,090 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 04:55:02] 2025-10-19 02:55:02,660 | INFO     | PID=1746162 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-19 04:55:02] 2025-10-19 02:55:02,660 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 04:55:02] 2025-10-19 02:55:02,660 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 04:55:02] 2025-10-19 02:55:02,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 04:55:02] 2025-10-19 02:55:02,660 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 04:55:02] 2025-10-19 02:55:02,660 | INFO     | [monitor] control thread has ended
[2025-10-19 04:55:02] 2025-10-19 02:55:02,736 [wrapper] ==== pilot stdout END ====
[2025-10-19 04:55:02] 2025-10-19 02:55:02,740 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 04:55:02] 2025-10-19 02:55:02,744 [wrapper] pilotpid: 1746162
[2025-10-19 04:55:02] 2025-10-19 02:55:02,749 [wrapper] Pilot exit status: 0
[2025-10-19 04:55:02] 2025-10-19 02:55:02,761 [wrapper] pandaids: 6850265805
[2025-10-19 04:55:02] 2025-10-19 02:55:02,783 [wrapper] cleanup supervisor_pilot 1762139 1746163
[2025-10-19 04:55:02] 2025-10-19 02:55:02,787 [wrapper] Test setup, not cleaning
[2025-10-19 04:55:02] 2025-10-19 02:55:02,791 [wrapper] apfmon messages muted
[2025-10-19 04:55:02] 2025-10-19 02:55:02,795 [wrapper] ==== wrapper stdout END ====
[2025-10-19 04:55:02] 2025-10-19 02:55:02,798 [wrapper] ==== wrapper stderr END ====
[2025-10-19 04:55:02]  *** Error codes and diagnostics ***
[2025-10-19 04:55:02]     "exeErrorCode": 0,
[2025-10-19 04:55:02]     "exeErrorDiag": "",
[2025-10-19 04:55:02]     "pilotErrorCode": 0,
[2025-10-19 04:55:02]     "pilotErrorDiag": "",
[2025-10-19 04:55:02]  *** Listing of results directory ***
[2025-10-19 04:55:02] total 331240
[2025-10-19 04:55:02] -rw-r--r-- 1 boinc boinc    557409 Oct 18 16:50 pilot3.tar.gz
[2025-10-19 04:55:02] -rw-r--r-- 1 boinc boinc      5112 Oct 18 17:08 queuedata.json
[2025-10-19 04:55:02] -rwx------ 1 boinc boinc     36292 Oct 18 17:09 runpilot2-wrapper.sh
[2025-10-19 04:55:02] -rw-r--r-- 1 boinc boinc       100 Oct 19 03:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 04:55:02] -rwxr-xr-x 1 boinc boinc      7986 Oct 19 03:57 run_atlas
[2025-10-19 04:55:02] -rw-r--r-- 1 boinc boinc       105 Oct 19 03:57 job.xml
[2025-10-19 04:55:02] -rw-r--r-- 2 boinc boinc 189430704 Oct 19 03:57 EVNT.46808900._000105.pool.root.1
[2025-10-19 04:55:02] drwxrwx--x 2 boinc boinc      4096 Oct 19 03:57 shared
[2025-10-19 04:55:02] -rw-r--r-- 2 boinc boinc    569672 Oct 19 03:57 input.tar.gz
[2025-10-19 04:55:02] -rw-r--r-- 2 boinc boinc     15120 Oct 19 03:57 start_atlas.sh
[2025-10-19 04:55:02] -rw-r--r-- 1 boinc boinc         0 Oct 19 03:57 boinc_setup_complete
[2025-10-19 04:55:02] -rw-r--r-- 1 boinc boinc      6378 Oct 19 03:57 init_data.xml
[2025-10-19 04:55:02] -rw-r--r-- 1 boinc boinc         0 Oct 19 03:57 boinc_lockfile
[2025-10-19 04:55:02] -rw-r--r-- 1 boinc boinc      2503 Oct 19 03:57 pandaJob.out
[2025-10-19 04:55:02] -rw------- 1 boinc boinc    976750 Oct 19 03:57 agis_schedconf.cvmfs.json
[2025-10-19 04:55:02] -rw------- 1 boinc boinc   1560740 Oct 19 03:57 agis_ddmendpoints.agis.ALL.json
[2025-10-19 04:55:02] drwx------ 5 boinc boinc      4096 Oct 19 03:57 pilot3
[2025-10-19 04:55:02] -rw------- 1 boinc boinc 144320373 Oct 19 04:54 HITS.46808902._002575.pool.root.1
[2025-10-19 04:55:02] -rw------- 1 boinc boinc        95 Oct 19 04:54 pilot_heartbeat.json
[2025-10-19 04:55:02] -rw-r--r-- 1 boinc boinc       529 Oct 19 04:54 boinc_task_state.xml
[2025-10-19 04:55:02] -rw------- 1 boinc boinc      1019 Oct 19 04:54 memory_monitor_summary.json
[2025-10-19 04:55:02] -rw------- 1 boinc boinc    251467 Oct 19 04:54 log.46808902._002575.job.log.tgz.1
[2025-10-19 04:55:02] -rw------- 1 boinc boinc      7758 Oct 19 04:54 heartbeat.json
[2025-10-19 04:55:02] -rw-r--r-- 1 boinc boinc      8192 Oct 19 04:54 boinc_mmap_file
[2025-10-19 04:55:02] -rw-r--r-- 1 boinc boinc        27 Oct 19 04:54 wrapper_checkpoint.txt
[2025-10-19 04:55:02] -rw------- 1 boinc boinc       747 Oct 19 04:55 pilotlog.txt
[2025-10-19 04:55:02] -rw------- 1 boinc boinc    515225 Oct 19 04:55 log.46808902._002575.job.log.1
[2025-10-19 04:55:02] -rw------- 1 boinc boinc       357 Oct 19 04:55 output.list
[2025-10-19 04:55:02] -rw-r--r-- 1 boinc boinc       620 Oct 19 04:55 runtime_log
[2025-10-19 04:55:02] -rw------- 1 boinc boinc    788480 Oct 19 04:55 result.tar.gz
[2025-10-19 04:55:02] -rw-r--r-- 1 boinc boinc      8787 Oct 19 04:55 runtime_log.err
[2025-10-19 04:55:02] -rw------- 1 boinc boinc       659 Oct 19 04:55 npgLDmdjNU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmTRcMDmbBuUEn.diag
[2025-10-19 04:55:02] -rw-r--r-- 1 boinc boinc     22436 Oct 19 04:55 stderr.txt
[2025-10-19 04:55:02] HITS file was successfully produced:
[2025-10-19 04:55:02] -rw------- 1 boinc boinc 144320373 Oct 19 04:54 shared/HITS.pool.root.1
[2025-10-19 04:55:02]  *** Contents of shared directory: ***
[2025-10-19 04:55:02] total 327288
[2025-10-19 04:55:02] -rw-r--r-- 2 boinc boinc 189430704 Oct 19 03:57 ATLAS.root_0
[2025-10-19 04:55:02] -rw-r--r-- 2 boinc boinc    569672 Oct 19 03:57 input.tar.gz
[2025-10-19 04:55:02] -rw-r--r-- 2 boinc boinc     15120 Oct 19 03:57 start_atlas.sh
[2025-10-19 04:55:02] -rw------- 1 boinc boinc 144320373 Oct 19 04:54 HITS.pool.root.1
[2025-10-19 04:55:02] -rw------- 1 boinc boinc    788480 Oct 19 04:55 result.tar.gz
04:55:04 (1742376): run_atlas exited; CPU time 12585.036987
04:55:04 (1742376): called boinc_finish(0)

</stderr_txt>
]]>

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