Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:05:21 (21397): wrapper (7.7.26015): starting
14:05:21 (21397): wrapper: running run_atlas (--nthreads 8)
[2025-10-18 14:05:21] Arguments: --nthreads 8
[2025-10-18 14:05:21] Threads: 8
[2025-10-18 14:05:21] Checking for CVMFS
[2025-10-18 14:05:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 14:05:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 14:05:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 14:05:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 14:05:22] 2.11.2.0 2765 11423 76820 151859 0 57 18415851 20275200 1 130560 0 6803630 99.973 695351 38279 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 14:05:22] CVMFS is ok
[2025-10-18 14:05:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 14:05:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 14:05:22] Further information can be found at the LHC@home message board.
[2025-10-18 14:05:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 14:05:22] Checking for apptainer binary...
[2025-10-18 14:05:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 14:05:22] Running /usr/bin/apptainer --version
[2025-10-18 14:05:22] apptainer version 1.3.2-1.el7
[2025-10-18 14:05:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 14:05:23] c-204-21.aglt2.org
[2025-10-18 14:05:23] apptainer works
[2025-10-18 14:05:23] Set ATHENA_PROC_NUMBER=8
[2025-10-18 14:05:23] Set ATHENA_CORE_NUMBER=8
[2025-10-18 14:05:23] Starting ATLAS job with PandaID=6850205156
[2025-10-18 14:05:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 15:46:02]  *** The last 200 lines of the pilot log: ***
[2025-10-18 15:46:02]  status_code=0
[2025-10-18 15:46:02]  storage_token=
[2025-10-18 15:46:02]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6850205156/log.46809188._002027.job.log.tgz.1
[2025-10-18 15:46:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/f4/log.46809188._002027.job.log.tgz.1
[2025-10-18 15:46:02]  workdir=None
[2025-10-18 15:46:02] ]
[2025-10-18 15:46:02] 2025-10-18 19:45:20,885 | INFO     | transferring file log.46809188._002027.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6850205156/log.46809188._002027.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-18 15:46:02] 2025-10-18 19:45:20,885 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6850205156/log.46809188._002027.job.log.tgz.1 /tmp/boinchome/slots/0/log.46809188._002027.job
[2025-10-18 15:46:02] 2025-10-18 19:45:20,909 | INFO     | adding to output.list: log.46809188._002027.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/f4/log.46809188._002027.job.log.tg
[2025-10-18 15:46:02] 2025-10-18 19:45:20,911 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 15:46:02] 2025-10-18 19:45:20,911 | INFO     | summary of transferred files:
[2025-10-18 15:46:02] 2025-10-18 19:45:20,911 | INFO     |  -- lfn=log.46809188._002027.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 15:46:02] 2025-10-18 19:45:20,911 | INFO     | stage-out finished correctly
[2025-10-18 15:46:02] 2025-10-18 19:45:21,045 | INFO     | time since job start (5980s) is within the limit (172800.0s)
[2025-10-18 15:46:02] 2025-10-18 19:45:21,597 | INFO     | monitor loop #442: job 0:6850205156 is in state 'finished'
[2025-10-18 15:46:02] 2025-10-18 19:45:21,598 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 15:46:02] 2025-10-18 19:45:23,051 | INFO     | time since job start (5982s) is within the limit (172800.0s)
[2025-10-18 15:46:02] 2025-10-18 19:45:24,101 | INFO     | monitor loop #443: job 0:6850205156 is in state 'finished'
[2025-10-18 15:46:02] 2025-10-18 19:45:24,101 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 15:46:02] 2025-10-18 19:45:24,470 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 15:46:02] 2025-10-18 19:45:24,873 | INFO     | job 6850205156 has state=finished
[2025-10-18 15:46:02] 2025-10-18 19:45:24,873 | INFO     | preparing for final server update for job 6850205156 in state='finished'
[2025-10-18 15:46:02] 2025-10-18 19:45:24,874 | INFO     | this job has now completed (state=finished)
[2025-10-18 15:46:02] 2025-10-18 19:45:24,874 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 15:46:02] 2025-10-18 19:45:24,874 | INFO     | log transfer has been attempted: DONE
[2025-10-18 15:46:02] 2025-10-18 19:45:24,874 | INFO     | job 6850205156 has finished - writing final server update
[2025-10-18 15:46:02] 2025-10-18 19:45:24,875 | INFO     | total number of processed events: 400 (read)
[2025-10-18 15:46:02] 2025-10-18 19:45:24,876 | INFO     | executing command: lscpu
[2025-10-18 15:46:02] 2025-10-18 19:45:24,903 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 15:46:02] 2025-10-18 19:45:25,057 | INFO     | time since job start (5984s) is within the limit (172800.0s)
[2025-10-18 15:46:02] 2025-10-18 19:45:26,179 | INFO     | PID=25079 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 15:46:02] 2025-10-18 19:45:26,604 | INFO     | monitor loop #444: job 0:6850205156 is in state 'finished'
[2025-10-18 15:46:02] 2025-10-18 19:45:26,605 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 15:46:02] 2025-10-18 19:45:27,180 | INFO     | time since job start (5986s) is within the limit (172800.0s)
[2025-10-18 15:46:02] 2025-10-18 19:45:29,107 | INFO     | monitor loop #445: job 0:6850205156 is in state 'finished'
[2025-10-18 15:46:02] 2025-10-18 19:45:29,108 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 15:46:02] 2025-10-18 19:45:29,185 | INFO     | time since job start (5988s) is within the limit (172800.0s)
[2025-10-18 15:46:02] 2025-10-18 19:45:30,535 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-18 15:46:02] 2025-10-18 19:45:30,539 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.75
[2025-10-18 15:46:02] 2025-10-18 19:45:30,541 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6850205156/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 15:46:02] 2025-10-18 19:45:30,543 | INFO     | extracted standard info from prmon json
[2025-10-18 15:46:02] 2025-10-18 19:45:30,543 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 15:46:02] 2025-10-18 19:45:30,543 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 15:46:02] 2025-10-18 19:45:30,544 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 15:46:02] 2025-10-18 19:45:30,544 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 15:46:02] 2025-10-18 19:45:30,547 | INFO     | fitting pss+swap vs Time
[2025-10-18 15:46:02] 2025-10-18 19:45:30,547 | INFO     | sum of square deviations: 233641590.0
[2025-10-18 15:46:02] 2025-10-18 19:45:30,547 | INFO     | sum of deviations: -385786692.00000006
[2025-10-18 15:46:02] 2025-10-18 19:45:30,548 | INFO     | mean x: 1760813823.0
[2025-10-18 15:46:02] 2025-10-18 19:45:30,548 | INFO     | mean y: 2483868.4725274723
[2025-10-18 15:46:02] 2025-10-18 19:45:30,548 | INFO     | -- intersect: 2909922308.7050376
[2025-10-18 15:46:02] 2025-10-18 19:45:30,548 | INFO     | intersect: 2909922308.7050376
[2025-10-18 15:46:02] 2025-10-18 19:45:30,548 | INFO     | chi2: 0.028111871955622068
[2025-10-18 15:46:02] 2025-10-18 19:45:30,548 | INFO     | -- intersect: 2909922308.7050376
[2025-10-18 15:46:02] 2025-10-18 19:45:30,549 | INFO     | current memory leak: -1.65 B/s (using 91 data points, chi2=0.03)
[2025-10-18 15:46:02] 2025-10-18 19:45:30,549 | INFO     | could have reported an average CPU frequency of 1947 MHz (7 samples)
[2025-10-18 15:46:02] 2025-10-18 19:45:30,549 | INFO     | ..............................
[2025-10-18 15:46:02] 2025-10-18 19:45:30,549 | INFO     | . Timing measurements:
[2025-10-18 15:46:02] 2025-10-18 19:45:30,549 | INFO     | . get job = 0 s
[2025-10-18 15:46:02] 2025-10-18 19:45:30,550 | INFO     | . initial setup = 2 s
[2025-10-18 15:46:02] 2025-10-18 19:45:30,550 | INFO     | . payload setup = 9 s
[2025-10-18 15:46:02] 2025-10-18 19:45:30,550 | INFO     | . stage-in = 0 s
[2025-10-18 15:46:02] 2025-10-18 19:45:30,550 | INFO     | . payload execution = 5948 s
[2025-10-18 15:46:02] 2025-10-18 19:45:30,550 | INFO     | . stage-out = 0 s
[2025-10-18 15:46:02] 2025-10-18 19:45:30,550 | INFO     | . log creation = 0 s
[2025-10-18 15:46:02] 2025-10-18 19:45:30,550 | INFO     | ..............................
[2025-10-18 15:46:02] 2025-10-18 19:45:31,041 | INFO     | 
[2025-10-18 15:46:02] 2025-10-18 19:45:31,042 | INFO     | job summary report
[2025-10-18 15:46:02] 2025-10-18 19:45:31,042 | INFO     | --------------------------------------------------
[2025-10-18 15:46:02] 2025-10-18 19:45:31,042 | INFO     | PanDA job id: 6850205156
[2025-10-18 15:46:02] 2025-10-18 19:45:31,042 | INFO     | task id: 46809188
[2025-10-18 15:46:02] 2025-10-18 19:45:31,043 | INFO     | errors: (none)
[2025-10-18 15:46:02] 2025-10-18 19:45:31,043 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 15:46:02] 2025-10-18 19:45:31,043 | INFO     | pilot state: finished 
[2025-10-18 15:46:02] 2025-10-18 19:45:31,043 | INFO     | transexitcode: 0
[2025-10-18 15:46:02] 2025-10-18 19:45:31,043 | INFO     | exeerrorcode: 0
[2025-10-18 15:46:02] 2025-10-18 19:45:31,043 | INFO     | exeerrordiag: 
[2025-10-18 15:46:02] 2025-10-18 19:45:31,044 | INFO     | exitcode: 0
[2025-10-18 15:46:02] 2025-10-18 19:45:31,044 | INFO     | exitmsg: OK
[2025-10-18 15:46:02] 2025-10-18 19:45:31,044 | INFO     | cpuconsumptiontime: 44375 s
[2025-10-18 15:46:02] 2025-10-18 19:45:31,044 | INFO     | nevents: 400
[2025-10-18 15:46:02] 2025-10-18 19:45:31,044 | INFO     | neventsw: 0
[2025-10-18 15:46:02] 2025-10-18 19:45:31,044 | INFO     | pid: 31565
[2025-10-18 15:46:02] 2025-10-18 19:45:31,045 | INFO     | pgrp: 31565
[2025-10-18 15:46:02] 2025-10-18 19:45:31,045 | INFO     | corecount: 8
[2025-10-18 15:46:02] 2025-10-18 19:45:31,045 | INFO     | event service: False
[2025-10-18 15:46:02] 2025-10-18 19:45:31,045 | INFO     | sizes: {0: 2348834, 6: 2349096, 11: 2349124, 5961: 2375839, 5962: 2384837, 5966: 2384893, 5972: 2385215}
[2025-10-18 15:46:02] 2025-10-18 19:45:31,045 | INFO     | --------------------------------------------------
[2025-10-18 15:46:02] 2025-10-18 19:45:31,046 | INFO     | 
[2025-10-18 15:46:02] 2025-10-18 19:45:31,046 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 15:46:02] 2025-10-18 19:45:31,074 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,074 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,074 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,074 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,075 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,075 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,075 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,075 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,075 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,076 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,076 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,076 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,076 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,076 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,077 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,077 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,077 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,077 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 15:46:02] 2025-10-18 19:45:31,077 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,078 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 15:46:02] 2025-10-18 19:45:31,078 | INFO     | job 6850205156 has completed (purged errors)
[2025-10-18 15:46:02] 2025-10-18 19:45:31,078 | INFO     | overall cleanup function is called
[2025-10-18 15:46:02] 2025-10-18 19:45:32,086 | INFO     | --- collectZombieJob: --- 10, [31565]
[2025-10-18 15:46:02] 2025-10-18 19:45:32,086 | INFO     | zombie collector waiting for pid 31565
[2025-10-18 15:46:02] 2025-10-18 19:45:32,087 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 15:46:02] 2025-10-18 19:45:32,087 | INFO     | collected zombie processes
[2025-10-18 15:46:02] 2025-10-18 19:45:32,087 | INFO     | will attempt to kill all subprocesses of pid=31565
[2025-10-18 15:46:02] 2025-10-18 19:45:32,178 | INFO     | process IDs to be killed: [31565] (in reverse order)
[2025-10-18 15:46:02] 2025-10-18 19:45:32,238 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 15:46:02] 2025-10-18 19:45:32,239 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 15:46:02] 2025-10-18 19:45:32,243 | INFO     | did not find any defunct processes belonging to 31565
[2025-10-18 15:46:02] 2025-10-18 19:45:32,247 | INFO     | did not find any defunct processes belonging to 31565
[2025-10-18 15:46:02] 2025-10-18 19:45:32,247 | INFO     | ready for new job
[2025-10-18 15:46:02] 2025-10-18 19:45:32,247 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 15:46:02] 2025-10-18 19:45:32,249 | INFO     | ***************************************
[2025-10-18 15:46:02] 2025-10-18 19:45:32,249 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 15:46:02] 2025-10-18 19:45:32,249 | INFO     | ***************************************
[2025-10-18 15:46:02] 2025-10-18 19:45:32,249 | INFO     | 
[2025-10-18 15:46:02] 2025-10-18 19:45:32,250 | INFO     | architecture information:
[2025-10-18 15:46:02] 2025-10-18 19:45:32,250 | INFO     | executing command: cat /etc/os-release
[2025-10-18 15:46:02] 2025-10-18 19:45:32,269 | INFO     | cat /etc/os-release:
[2025-10-18 15:46:02] NAME="CentOS Linux"
[2025-10-18 15:46:02] VERSION="7 (Core)"
[2025-10-18 15:46:02] ID="centos"
[2025-10-18 15:46:02] ID_LIKE="rhel fedora"
[2025-10-18 15:46:02] VERSION_ID="7"
[2025-10-18 15:46:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 15:46:02] ANSI_COLOR="0;31"
[2025-10-18 15:46:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 15:46:02] HOME_URL="https://www.centos.org/"
[2025-10-18 15:46:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 15:46:02] 
[2025-10-18 15:46:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 15:46:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 15:46:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 15:46:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 15:46:02] 
[2025-10-18 15:46:02] 2025-10-18 19:45:32,269 | INFO     | ***************************************
[2025-10-18 15:46:02] 2025-10-18 19:45:32,772 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 15:46:02] 2025-10-18 19:45:32,790 | INFO     | sufficient remaining disk space (18662555648 B)
[2025-10-18 15:46:02] 2025-10-18 19:45:32,791 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 15:46:02] 2025-10-18 19:45:32,791 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 15:46:02] 2025-10-18 19:45:32,791 | INFO     | update_server=False
[2025-10-18 15:46:02] 2025-10-18 19:45:32,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 15:46:02] 2025-10-18 19:45:32,792 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 15:46:02] 2025-10-18 19:45:32,792 | INFO     | aborting loop
[2025-10-18 15:46:02] 2025-10-18 19:45:33,054 | INFO     | all payload control threads have been joined
[2025-10-18 15:46:02] 2025-10-18 19:45:33,674 | INFO     | all job control threads have been joined
[2025-10-18 15:46:02] 2025-10-18 19:45:33,797 | INFO     | [job] retrieve thread has finished
[2025-10-18 15:46:02] 2025-10-18 19:45:33,798 | INFO     | [job] job monitor thread has finished
[2025-10-18 15:46:02] 2025-10-18 19:45:33,852 | INFO     | [job] validate thread has finished
[2025-10-18 15:46:02] 2025-10-18 19:45:33,891 | INFO     | all data control threads have been joined
[2025-10-18 15:46:02] 2025-10-18 19:45:33,906 | INFO     | [payload] validate_post thread has finished
[2025-10-18 15:46:02] 2025-10-18 19:45:34,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 15:46:02] 2025-10-18 19:45:34,060 | INFO     | [payload] control thread has finished
[2025-10-18 15:46:02] 2025-10-18 19:45:34,117 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 15:46:02] 2025-10-18 19:45:34,542 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 15:46:02] 2025-10-18 19:45:34,545 | INFO     | [data] copytool_in thread has finished
[2025-10-18 15:46:02] 2025-10-18 19:45:34,551 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 15:46:02] 2025-10-18 19:45:34,676 | INFO     | [job] control thread has finished
[2025-10-18 15:46:02] 2025-10-18 19:45:34,897 | INFO     | [data] control thread has finished
[2025-10-18 15:46:02] 2025-10-18 19:45:35,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 15:46:02] 2025-10-18 19:45:35,106 | INFO     | [payload] failed_post thread has finished
[2025-10-18 15:46:02] 2025-10-18 19:45:35,205 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 15:46:02] 2025-10-18 19:45:35,657 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 15:46:02] 2025-10-18 19:45:36,030 | INFO     | [data] copytool_out thread has finished
[2025-10-18 15:46:02] 2025-10-18 19:45:36,662 | INFO     | [job] queue monitor thread has finished
[2025-10-18 15:46:02] 2025-10-18 19:45:39,078 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 15:46:02] 2025-10-18 19:45:50,829 | INFO     | [monitor] cgroup control has ended
[2025-10-18 15:46:02] 2025-10-18 19:45:52,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139653682935616)>', '<ExcThread(monitor, started 139653227190016)>']
[2025-10-18 15:46:02] 2025-10-18 19:45:57,746 | INFO     | all workflow threads have been joined
[2025-10-18 15:46:02] 2025-10-18 19:45:57,746 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 15:46:02] 2025-10-18 19:45:57,747 | INFO     | traces error code: 0
[2025-10-18 15:46:02] 2025-10-18 19:45:57,747 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 15:46:02] 2025-10-18 19:46:02,399 | INFO     | PID=25079 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 15:46:02] 2025-10-18 19:46:02,400 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 15:46:02] 2025-10-18 19:46:02,400 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 15:46:02] 2025-10-18 19:46:02,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 15:46:02] 2025-10-18 19:46:02,400 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 15:46:02] 2025-10-18 19:46:02,400 | INFO     | [monitor] control thread has ended
[2025-10-18 15:46:02] 2025-10-18 19:46:02,505 [wrapper] ==== pilot stdout END ====
[2025-10-18 15:46:02] 2025-10-18 19:46:02,510 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 15:46:02] 2025-10-18 19:46:02,514 [wrapper] pilotpid: 25079
[2025-10-18 15:46:02] 2025-10-18 19:46:02,519 [wrapper] Pilot exit status: 0
[2025-10-18 15:46:02] 2025-10-18 19:46:02,537 [wrapper] pandaids: 6850205156
[2025-10-18 15:46:02] 2025-10-18 19:46:02,581 [wrapper] cleanup supervisor_pilot  2541 25080
[2025-10-18 15:46:02] 2025-10-18 19:46:02,586 [wrapper] Test setup, not cleaning
[2025-10-18 15:46:02] 2025-10-18 19:46:02,591 [wrapper] apfmon messages muted
[2025-10-18 15:46:02] 2025-10-18 19:46:02,596 [wrapper] ==== wrapper stdout END ====
[2025-10-18 15:46:02] 2025-10-18 19:46:02,600 [wrapper] ==== wrapper stderr END ====
[2025-10-18 15:46:02]  *** Error codes and diagnostics ***
[2025-10-18 15:46:02]     "exeErrorCode": 0,
[2025-10-18 15:46:02]     "exeErrorDiag": "",
[2025-10-18 15:46:02]     "pilotErrorCode": 0,
[2025-10-18 15:46:02]     "pilotErrorDiag": "",
[2025-10-18 15:46:02]  *** Listing of results directory ***
[2025-10-18 15:46:02] total 336392
[2025-10-18 15:46:02] -rw-r--r-- 1 boincer umatlas    557409 Oct 18 09:39 pilot3.tar.gz
[2025-10-18 15:46:02] -rw-r--r-- 1 boincer umatlas      5112 Oct 18 09:51 queuedata.json
[2025-10-18 15:46:02] -rwx------ 1 boincer umatlas     36292 Oct 18 09:52 runpilot2-wrapper.sh
[2025-10-18 15:46:02] -rw-r--r-- 1 boincer umatlas       100 Oct 18 14:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 15:46:02] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 14:05 run_atlas
[2025-10-18 15:46:02] -rw-r--r-- 1 boincer umatlas       105 Oct 18 14:05 job.xml
[2025-10-18 15:46:02] -rw-r--r-- 2 boincer umatlas 189422092 Oct 18 14:05 EVNT.46809186._000079.pool.root.1
[2025-10-18 15:46:02] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 14:05 start_atlas.sh
[2025-10-18 15:46:02] drwxrwx--x 2 boincer umatlas      4096 Oct 18 14:05 shared
[2025-10-18 15:46:02] -rw-r--r-- 2 boincer umatlas    569670 Oct 18 14:05 input.tar.gz
[2025-10-18 15:46:02] -rw-r--r-- 1 boincer umatlas         0 Oct 18 14:05 boinc_lockfile
[2025-10-18 15:46:02] -rw-r--r-- 1 boincer umatlas      2489 Oct 18 14:05 pandaJob.out
[2025-10-18 15:46:02] -rw------- 1 boincer umatlas    976742 Oct 18 14:05 agis_schedconf.cvmfs.json
[2025-10-18 15:46:02] -rw------- 1 boincer umatlas   1560740 Oct 18 14:05 agis_ddmendpoints.agis.ALL.json
[2025-10-18 15:46:02] drwx------ 5 boincer umatlas      4096 Oct 18 14:05 pilot3
[2025-10-18 15:46:02] -rw------- 1 boincer umatlas 148762912 Oct 18 15:44 HITS.46809188._002027.pool.root.1
[2025-10-18 15:46:02] -rw------- 1 boincer umatlas        95 Oct 18 15:45 pilot_heartbeat.json
[2025-10-18 15:46:02] -rw------- 1 boincer umatlas      1050 Oct 18 15:45 memory_monitor_summary.json
[2025-10-18 15:46:02] -rw------- 1 boincer umatlas    340087 Oct 18 15:45 log.46809188._002027.job.log.tgz.1
[2025-10-18 15:46:02] -rw-r--r-- 1 boincer umatlas       529 Oct 18 15:45 boinc_task_state.xml
[2025-10-18 15:46:02] -rw------- 1 boincer umatlas      7839 Oct 18 15:45 heartbeat.json
[2025-10-18 15:46:02] -rw-r--r-- 1 boincer umatlas      5910 Oct 18 15:45 init_data.xml
[2025-10-18 15:46:02] -rw-r--r-- 1 boincer umatlas        27 Oct 18 15:45 wrapper_checkpoint.txt
[2025-10-18 15:46:02] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 15:45 boinc_mmap_file
[2025-10-18 15:46:02] -rw------- 1 boincer umatlas       745 Oct 18 15:46 pilotlog.txt
[2025-10-18 15:46:02] -rw------- 1 boincer umatlas    850177 Oct 18 15:46 log.46809188._002027.job.log.1
[2025-10-18 15:46:02] -rw------- 1 boincer umatlas       357 Oct 18 15:46 output.list
[2025-10-18 15:46:02] -rw-r--r-- 1 boincer umatlas       620 Oct 18 15:46 runtime_log
[2025-10-18 15:46:02] -rw------- 1 boincer umatlas   1208320 Oct 18 15:46 result.tar.gz
[2025-10-18 15:46:02] -rw-r--r-- 1 boincer umatlas      8703 Oct 18 15:46 runtime_log.err
[2025-10-18 15:46:02] -rw------- 1 boincer umatlas       658 Oct 18 15:46 JN5NDmhXMU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoMxNDmJMvdCo.diag
[2025-10-18 15:46:02] -rw-r--r-- 1 boincer umatlas     22193 Oct 18 15:46 stderr.txt
[2025-10-18 15:46:02] HITS file was successfully produced:
[2025-10-18 15:46:02] -rw------- 1 boincer umatlas 148762912 Oct 18 15:44 shared/HITS.pool.root.1
[2025-10-18 15:46:02]  *** Contents of shared directory: ***
[2025-10-18 15:46:02] total 332024
[2025-10-18 15:46:02] -rw-r--r-- 2 boincer umatlas 189422092 Oct 18 14:05 ATLAS.root_0
[2025-10-18 15:46:02] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 14:05 start_atlas.sh
[2025-10-18 15:46:02] -rw-r--r-- 2 boincer umatlas    569670 Oct 18 14:05 input.tar.gz
[2025-10-18 15:46:02] -rw------- 1 boincer umatlas 148762912 Oct 18 15:44 HITS.pool.root.1
[2025-10-18 15:46:02] -rw------- 1 boincer umatlas   1208320 Oct 18 15:46 result.tar.gz
15:46:04 (21397): run_atlas exited; CPU time 44334.378485
15:46:04 (21397): called boinc_finish(0)

</stderr_txt>
]]>

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