Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-18 11:12:01 (12872): vboxwrapper version 26210
2025-10-18 11:12:02 (12872): BOINC client version: 8.2.4
2025-10-18 11:12:17 (12872): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2025-10-18 11:12:22 (12872): Successfully copied 'init_data.xml' to the shared directory.
2025-10-18 11:12:22 (12872): Create VM. (boinc_62cd4bb0fcd917f5, slot#1)
2025-10-18 11:12:23 (12872): Setting Memory Size for VM. (4300MB)
2025-10-18 11:12:23 (12872): Setting CPU Count for VM. (3)
2025-10-18 11:12:24 (12872): Setting Chipset Options for VM.
2025-10-18 11:12:24 (12872): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-18 11:12:24 (12872): Setting Boot Options for VM.
2025-10-18 11:12:25 (12872): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-18 11:12:25 (12872): Enabling VM Network Access.
2025-10-18 11:12:25 (12872): Disabling USB Support for VM.
2025-10-18 11:12:26 (12872): Disabling COM Port Support for VM.
2025-10-18 11:12:26 (12872): Disabling LPT Port Support for VM.
2025-10-18 11:12:26 (12872): Disabling Audio Support for VM.
2025-10-18 11:12:26 (12872): Disabling Clipboard Support for VM.
2025-10-18 11:12:27 (12872): Disabling Drag and Drop Support for VM.
2025-10-18 11:12:27 (12872): Adding storage controller(s) to VM.
2025-10-18 11:12:27 (12872): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-18 11:12:29 (12872): Adding VirtualBox Guest Additions to VM.
2025-10-18 11:12:30 (12872): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-18 11:12:30 (12872): forwarding host port 63311 to guest port 80
2025-10-18 11:12:30 (12872): Enabling remote desktop for VM.
2025-10-18 11:12:31 (12872): Enabling shared directory for VM.
2025-10-18 11:12:31 (12872): Starting VM using VBoxManage interface. (boinc_62cd4bb0fcd917f5, slot#1)
2025-10-18 11:12:43 (12872): Successfully started VM. (PID = '15580')
2025-10-18 11:12:43 (12872): Reporting VM Process ID to BOINC.
2025-10-18 11:12:43 (12872): Guest Log: BIOS: VirtualBox 7.1.10
2025-10-18 11:12:43 (12872): Guest Log: CPUID EDX: 0x178bfbff
2025-10-18 11:12:43 (12872): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-18 11:12:43 (12872): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-18 11:12:43 (12872): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-18 11:12:43 (12872): Detected: Web Application Enabled (http://localhost:63311)
2025-10-18 11:12:43 (12872): Detected: Remote Desktop Enabled (localhost:63312)
2025-10-18 11:12:43 (12872): Preference change detected
2025-10-18 11:12:49 (12872): Setting CPU throttle for VM. (100%)
2025-10-18 11:13:06 (12872): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-18 11:13:06 (12872): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-18 11:13:06 (12872): Guest Log: BIOS: Booting from Hard Disk...
2025-10-18 11:13:06 (12872): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-18 11:13:06 (12872): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-18 11:13:06 (12872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-18 11:13:06 (12872): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-18 11:13:06 (12872): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-18 11:13:06 (12872): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-18 11:13:07 (12872): Guest Log: 00:00:00.000289 main     Log opened 2025-10-18T11:13:05.561859000Z
2025-10-18 11:13:07 (12872): Guest Log: 00:00:00.000459 main     OS Product: Linux
2025-10-18 11:13:07 (12872): Guest Log: 00:00:00.000524 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-18 11:13:07 (12872): Guest Log: 00:00:00.000582 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-18 11:13:07 (12872): Guest Log: 00:00:00.000640 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-18 11:13:07 (12872): Guest Log: 00:00:00.000642 main     Process ID: 1312
2025-10-18 11:13:07 (12872): Guest Log: 00:00:00.000643 main     Package type: LINUX_64BITS_GENERIC
2025-10-18 11:13:07 (12872): Guest Log: 00:00:00.002820 main     5.2.32 r132073 started. Verbose level = 0
2025-10-18 11:13:08 (12872): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-18 11:13:08 (12872): Guest Log: [INFO] Mounting shared directory
2025-10-18 11:13:08 (12872): Guest Log: [INFO] Checking for init_data.xml
2025-10-18 11:13:16 (12872): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-18 11:13:17 (12872): Guest Log: [INFO] Detected branch: prod
2025-10-18 11:13:17 (12872): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-18 11:13:17 (12872): Guest Log: Copying input files
2025-10-18 11:13:17 (12872): Guest Log: 00:00:10.005699 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 358 290 000ns (GuestNow=1 760 811 196 925 253 000 ns GuestLast=1 760 785 985 566 963 000 ns fSetTimeLastLoop=true )
2025-10-18 11:13:20 (12872): Guest Log: Copied input files into RunAtlas.
2025-10-18 11:13:20 (12872): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-18 11:13:20 (12872): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-18 11:13:20 (12872): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-18 11:13:20 (12872): Guest Log: Further information can be found at the LHC@home message board.
2025-10-18 11:13:31 (12872): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-18 11:13:31 (12872): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-18 11:13:31 (12872): Guest Log: 2.6.3.0 1593 0 32192 151861 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-18 11:13:31 (12872): Guest Log: copied the webapp to /var/www
2025-10-18 11:13:31 (12872): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-18 11:13:31 (12872): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-18 11:13:33 (12872): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-18 11:13:33 (12872): Guest Log:  *** Starting ATLAS job. (PandaID=6850205149 taskID=46809188) ***
2025-10-18 13:21:57 (12872): Status Report: Elapsed Time: '6000.777954'
2025-10-18 13:21:59 (12872): Status Report: CPU Time: '20564.718750'
2025-10-18 15:27:40 (12872): Status Report: Elapsed Time: '12001.494709'
2025-10-18 15:27:41 (12872): Status Report: CPU Time: '42574.671875'
2025-10-18 17:37:43 (12872): Status Report: Elapsed Time: '18002.067497'
2025-10-18 17:37:44 (12872): Status Report: CPU Time: '65754.203125'
2025-10-18 18:19:28 (12872): Guest Log:  *** Job finished ***
2025-10-18 18:19:28 (12872): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:18:27,386 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:18:31,458 | INFO     | [data] queue_monitor thread has finished
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:19:19,534 | INFO     | [monitor] cgroup control has ended
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:19:20,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140266121721664)>', '<ExcThread(monitor, started 140265301993216)>']
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:19:21,031 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:19:21,032 | INFO     | [monitor] control thread has ended
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:19:25,239 | INFO     | all workflow threads have been joined
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:19:25,239 | INFO     | end of generic workflow (traces error code: 0)
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:19:25,240 | INFO     | traces error code: 0
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:19:25,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:19:25,382 [wrapper] ==== pilot stdout END ====
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:19:25,389 [wrapper] ==== wrapper stdout RESUME ====
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:19:25,395 [wrapper] pilotpid: 5980
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:19:25,402 [wrapper] Pilot exit status: 0
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:19:25,507 [wrapper] pandaids: 6850205149
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:19:25,559 [wrapper] cleanup supervisor_pilot 31777 5981
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:19:25,566 [wrapper] Test setup, not cleaning
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:19:25,573 [wrapper] apfmon messages muted
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:19:25,579 [wrapper] ==== wrapper stdout END ====
2025-10-18 18:19:28 (12872): Guest Log: 2025-10-19 01:19:25,585 [wrapper] ==== wrapper stderr END ====
2025-10-18 18:19:28 (12872): Guest Log:  *** Error codes and diagnostics ***
2025-10-18 18:19:28 (12872): Guest Log:     "exeErrorCode": 0,
2025-10-18 18:19:28 (12872): Guest Log:     "exeErrorDiag": "",
2025-10-18 18:19:28 (12872): Guest Log:     "pilotErrorCode": 0,
2025-10-18 18:19:28 (12872): Guest Log:     "pilotErrorDiag": "",
2025-10-18 18:19:28 (12872): Guest Log:  *** Listing of results directory ***
2025-10-18 18:19:28 (12872): Guest Log: total 146572
2025-10-18 18:19:28 (12872): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 18 13:39 pilot3.tar.gz
2025-10-18 18:19:28 (12872): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 18 13:51 queuedata.json
2025-10-18 18:19:28 (12872): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 18 13:52 runpilot2-wrapper.sh
2025-10-18 18:19:28 (12872): Guest Log: -rwxr-xr-x. 1 atlas atlas      8642 Oct 18 18:13 init_data.xml
2025-10-18 18:19:28 (12872): Guest Log: -rwxr-xr-x. 1 atlas atlas    569667 Oct 18 18:13 input.tar.gz
2025-10-18 18:19:28 (12872): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 18 18:13 start_atlas.sh
2025-10-18 18:19:28 (12872): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 18 18:13 EVNT.46809186._000079.pool.root.1 -> /data/./ATLAS.root_0
2025-10-18 18:19:28 (12872): Guest Log: -rw-r--r--. 1 atlas atlas      2488 Oct 18 18:13 pandaJob.out
2025-10-18 18:19:28 (12872): Guest Log: -rw-------. 1 atlas atlas    976750 Oct 18 18:14 agis_schedconf.cvmfs.json
2025-10-18 18:19:28 (12872): Guest Log: drwx------. 5 atlas atlas      4096 Oct 18 18:14 pilot3
2025-10-18 18:19:28 (12872): Guest Log: -rw-------. 1 atlas atlas 138488485 Oct 19 01:17 HITS.46809188._002020.pool.root.1
2025-10-18 18:19:28 (12872): Guest Log: -rw-------. 1 atlas atlas        95 Oct 19 01:17 pilot_heartbeat.json
2025-10-18 18:19:28 (12872): Guest Log: -rw-------. 1 atlas atlas      1030 Oct 19 01:17 memory_monitor_summary.json
2025-10-18 18:19:28 (12872): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 19 01:18 agis_ddmendpoints.agis.ALL.json
2025-10-18 18:19:28 (12872): Guest Log: -rw-------. 1 atlas atlas    512862 Oct 19 01:18 log.46809188._002020.job.log.tgz.1
2025-10-18 18:19:28 (12872): Guest Log: -rw-------. 1 atlas atlas      7781 Oct 19 01:18 heartbeat.json
2025-10-18 18:19:28 (12872): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 19 01:19 pilotlog.txt
2025-10-18 18:19:28 (12872): Guest Log: -rw-------. 1 atlas atlas   3369889 Oct 19 01:19 log.46809188._002020.job.log.1
2025-10-18 18:19:28 (12872): Guest Log: -rw-------. 1 atlas atlas       357 Oct 19 01:19 output.list
2025-10-18 18:19:28 (12872): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 19 01:19 runtime_log
2025-10-18 18:19:28 (12872): Guest Log: -rw-------. 1 atlas atlas   3901440 Oct 19 01:19 result.tar.gz
2025-10-18 18:19:28 (12872): Guest Log: -rw-------. 1 atlas atlas       655 Oct 19 01:19 V8tNDmhXMU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhMxNDmNvIfTm.diag
2025-10-18 18:19:28 (12872): Guest Log: -rw-r--r--. 1 atlas atlas      8621 Oct 19 01:19 runtime_log.err
2025-10-18 18:19:28 (12872): Guest Log: Looking for outputfile HITS.46809188._002020.pool.root.1
2025-10-18 18:19:28 (12872): Guest Log: HITS file was successfully produced
2025-10-18 18:19:28 (12872): Guest Log: -rw-------. 1 atlas atlas 138488485 Oct 19 01:17 /home/atlas/RunAtlas/HITS.46809188._002020.pool.root.1
2025-10-18 18:19:30 (12872): Guest Log: Successfully finished the ATLAS job!
2025-10-18 18:19:30 (12872): Guest Log: Copying the results back to the shared directory!
2025-10-18 18:19:30 (12872): Guest Log:  *** Contents of shared directory: ***
2025-10-18 18:19:30 (12872): Guest Log: total 324628
2025-10-18 18:19:30 (12872): Guest Log: -rwxrwxrwx. 1 root root 189422092 Oct 18 18:12 ATLAS.root_0
2025-10-18 18:19:30 (12872): Guest Log: -rwxrwxrwx. 1 root root 138488485 Oct 19 01:19 HITS.pool.root.1
2025-10-18 18:19:30 (12872): Guest Log: -rwxrwxrwx. 1 root root      8642 Oct 18 18:12 init_data.xml
2025-10-18 18:19:30 (12872): Guest Log: -rwxrwxrwx. 1 root root    569667 Oct 18 17:54 input.tar.gz
2025-10-18 18:19:30 (12872): Guest Log: -rwxrwxrwx. 1 root root   3901440 Oct 19 01:19 result.tar.gz
2025-10-18 18:19:30 (12872): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 18 17:54 start_atlas.sh
2025-10-18 18:19:30 (12872): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-18 18:19:30 (12872): VM Completion File Detected.
2025-10-18 18:19:30 (12872): Powering off VM.
2025-10-18 18:19:31 (12872): Successfully stopped VM.
2025-10-18 18:19:31 (12872): Deregistering VM. (boinc_62cd4bb0fcd917f5, slot#1)
2025-10-18 18:19:31 (12872): Removing network bandwidth throttle group from VM.
2025-10-18 18:19:31 (12872): Removing VM from VirtualBox.
2025-10-18 18:19:37 (12872): called boinc_finish(0)

</stderr_txt>
]]>

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