Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:33:54 (13446): wrapper (7.7.26015): starting
13:33:54 (13446): wrapper: running run_atlas (--nthreads 12)
[2025-10-18 13:33:54] Arguments: --nthreads 12
[2025-10-18 13:33:54] Threads: 12
[2025-10-18 13:33:54] Checking for CVMFS
[2025-10-18 13:33:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 13:33:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 13:33:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 13:33:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 13:33:55] 2.11.2.0 2991 231781 96716 151859 2 57 18912719 20275200 1 130560 1 115270791 99.984 13768450 12682 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 13:33:55] CVMFS is ok
[2025-10-18 13:33:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 13:33:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 13:33:55] Further information can be found at the LHC@home message board.
[2025-10-18 13:33:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 13:33:55] Checking for apptainer binary...
[2025-10-18 13:33:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 13:33:55] Running /usr/bin/apptainer --version
[2025-10-18 13:33:55] apptainer version 1.3.2-1.el7
[2025-10-18 13:33:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 13:33:56] c-205-32.aglt2.org
[2025-10-18 13:33:56] apptainer works
[2025-10-18 13:33:56] Set ATHENA_PROC_NUMBER=12
[2025-10-18 13:33:56] Set ATHENA_CORE_NUMBER=12
[2025-10-18 13:33:56] Starting ATLAS job with PandaID=6850176149
[2025-10-18 13:33:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 14:33:21]  *** The last 200 lines of the pilot log: ***
[2025-10-18 14:33:21]  storage_token=
[2025-10-18 14:33:21]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6850176149/log.46808902._001929.job.log.tgz.1
[2025-10-18 14:33:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f0/85/log.46808902._001929.job.log.tgz.1
[2025-10-18 14:33:21]  workdir=None
[2025-10-18 14:33:21] ]
[2025-10-18 14:33:21] 2025-10-18 18:32:46,966 | INFO     | transferring file log.46808902._001929.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6850176149/log.46808902._001929.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-18 14:33:21] 2025-10-18 18:32:46,967 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6850176149/log.46808902._001929.job.log.tgz.1 /tmp/boinchome/slots/0/log.46808902._001929.job
[2025-10-18 14:33:21] 2025-10-18 18:32:46,990 | INFO     | adding to output.list: log.46808902._001929.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f0/85/log.46808902._001929.job.log.tg
[2025-10-18 14:33:21] 2025-10-18 18:32:46,991 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 14:33:21] 2025-10-18 18:32:46,991 | INFO     | summary of transferred files:
[2025-10-18 14:33:21] 2025-10-18 18:32:46,991 | INFO     |  -- lfn=log.46808902._001929.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 14:33:21] 2025-10-18 18:32:46,991 | INFO     | stage-out finished correctly
[2025-10-18 14:33:21] 2025-10-18 18:32:48,024 | INFO     | time since job start (3518s) is within the limit (172800.0s)
[2025-10-18 14:33:21] 2025-10-18 18:32:49,061 | WARNING  | process 23540 can no longer be monitored (due to stat problems) - aborting
[2025-10-18 14:33:21] 2025-10-18 18:32:49,061 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6850176149/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 14:33:21] 2025-10-18 18:32:49,144 | INFO     | number of running child processes to parent process 23540: 1
[2025-10-18 14:33:21] 2025-10-18 18:32:49,144 | INFO     | maximum number of monitored processes: 6
[2025-10-18 14:33:21] 2025-10-18 18:32:50,029 | INFO     | time since job start (3520s) is within the limit (172800.0s)
[2025-10-18 14:33:21] 2025-10-18 18:32:50,158 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 14:33:21] 2025-10-18 18:32:50,485 | INFO     | job 6850176149 has state=finished
[2025-10-18 14:33:21] 2025-10-18 18:32:50,486 | INFO     | preparing for final server update for job 6850176149 in state='finished'
[2025-10-18 14:33:21] 2025-10-18 18:32:50,486 | INFO     | this job has now completed (state=finished)
[2025-10-18 14:33:21] 2025-10-18 18:32:50,486 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 14:33:21] 2025-10-18 18:32:50,486 | INFO     | log transfer has been attempted: DONE
[2025-10-18 14:33:21] 2025-10-18 18:32:50,487 | INFO     | job 6850176149 has finished - writing final server update
[2025-10-18 14:33:21] 2025-10-18 18:32:50,487 | INFO     | total number of processed events: 400 (read)
[2025-10-18 14:33:21] 2025-10-18 18:32:50,488 | INFO     | executing command: lscpu
[2025-10-18 14:33:21] 2025-10-18 18:32:50,512 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 14:33:21] 2025-10-18 18:32:51,647 | INFO     | monitor loop #265: job 0:6850176149 is in state 'finished'
[2025-10-18 14:33:21] 2025-10-18 18:32:51,647 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 14:33:21] 2025-10-18 18:32:52,034 | INFO     | time since job start (3522s) is within the limit (172800.0s)
[2025-10-18 14:33:21] 2025-10-18 18:32:53,157 | INFO     | PID=17157 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 14:33:21] 2025-10-18 18:32:54,150 | INFO     | monitor loop #266: job 0:6850176149 is in state 'finished'
[2025-10-18 14:33:21] 2025-10-18 18:32:54,151 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 14:33:21] 2025-10-18 18:32:54,158 | INFO     | time since job start (3524s) is within the limit (172800.0s)
[2025-10-18 14:33:21] 2025-10-18 18:32:56,164 | INFO     | time since job start (3526s) is within the limit (172800.0s)
[2025-10-18 14:33:21] 2025-10-18 18:32:56,264 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-18 14:33:21] 2025-10-18 18:32:56,268 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.5
[2025-10-18 14:33:21] 2025-10-18 18:32:56,270 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6850176149/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 14:33:21] 2025-10-18 18:32:56,271 | INFO     | extracted standard info from prmon json
[2025-10-18 14:33:21] 2025-10-18 18:32:56,271 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 14:33:21] 2025-10-18 18:32:56,271 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 14:33:21] 2025-10-18 18:32:56,272 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 14:33:21] 2025-10-18 18:32:56,272 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 14:33:21] 2025-10-18 18:32:56,273 | INFO     | fitting pss+swap vs Time
[2025-10-18 14:33:21] 2025-10-18 18:32:56,274 | INFO     | sum of square deviations: 41117050.0
[2025-10-18 14:33:21] 2025-10-18 18:32:56,274 | INFO     | sum of deviations: -5202022294.0
[2025-10-18 14:33:21] 2025-10-18 18:32:56,274 | INFO     | mean x: 1760810709.0
[2025-10-18 14:33:21] 2025-10-18 18:32:56,274 | INFO     | mean y: 2783757.0392156863
[2025-10-18 14:33:21] 2025-10-18 18:32:56,274 | INFO     | -- intersect: 222775977936.38687
[2025-10-18 14:33:21] 2025-10-18 18:32:56,274 | INFO     | intersect: 222775977936.38687
[2025-10-18 14:33:21] 2025-10-18 18:32:56,275 | INFO     | chi2: 0.04086892107452466
[2025-10-18 14:33:21] 2025-10-18 18:32:56,275 | INFO     | -- intersect: 222775977936.38687
[2025-10-18 14:33:21] 2025-10-18 18:32:56,275 | INFO     | current memory leak: -126.52 B/s (using 51 data points, chi2=0.04)
[2025-10-18 14:33:21] 2025-10-18 18:32:56,275 | INFO     | could have reported an average CPU frequency of 1924 MHz (5 samples)
[2025-10-18 14:33:21] 2025-10-18 18:32:56,276 | INFO     | ..............................
[2025-10-18 14:33:21] 2025-10-18 18:32:56,276 | INFO     | . Timing measurements:
[2025-10-18 14:33:21] 2025-10-18 18:32:56,276 | INFO     | . get job = 0 s
[2025-10-18 14:33:21] 2025-10-18 18:32:56,276 | INFO     | . initial setup = 2 s
[2025-10-18 14:33:21] 2025-10-18 18:32:56,276 | INFO     | . payload setup = 6 s
[2025-10-18 14:33:21] 2025-10-18 18:32:56,276 | INFO     | . stage-in = 0 s
[2025-10-18 14:33:21] 2025-10-18 18:32:56,276 | INFO     | . payload execution = 3489 s
[2025-10-18 14:33:21] 2025-10-18 18:32:56,277 | INFO     | . stage-out = 0 s
[2025-10-18 14:33:21] 2025-10-18 18:32:56,277 | INFO     | . log creation = 0 s
[2025-10-18 14:33:21] 2025-10-18 18:32:56,277 | INFO     | ..............................
[2025-10-18 14:33:21] 2025-10-18 18:32:56,359 | INFO     | 
[2025-10-18 14:33:21] 2025-10-18 18:32:56,359 | INFO     | job summary report
[2025-10-18 14:33:21] 2025-10-18 18:32:56,359 | INFO     | --------------------------------------------------
[2025-10-18 14:33:21] 2025-10-18 18:32:56,360 | INFO     | PanDA job id: 6850176149
[2025-10-18 14:33:21] 2025-10-18 18:32:56,360 | INFO     | task id: 46808902
[2025-10-18 14:33:21] 2025-10-18 18:32:56,360 | INFO     | errors: (none)
[2025-10-18 14:33:21] 2025-10-18 18:32:56,360 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 14:33:21] 2025-10-18 18:32:56,360 | INFO     | pilot state: finished 
[2025-10-18 14:33:21] 2025-10-18 18:32:56,360 | INFO     | transexitcode: 0
[2025-10-18 14:33:21] 2025-10-18 18:32:56,361 | INFO     | exeerrorcode: 0
[2025-10-18 14:33:21] 2025-10-18 18:32:56,361 | INFO     | exeerrordiag: 
[2025-10-18 14:33:21] 2025-10-18 18:32:56,361 | INFO     | exitcode: 0
[2025-10-18 14:33:21] 2025-10-18 18:32:56,361 | INFO     | exitmsg: OK
[2025-10-18 14:33:21] 2025-10-18 18:32:56,361 | INFO     | cpuconsumptiontime: 35335 s
[2025-10-18 14:33:21] 2025-10-18 18:32:56,361 | INFO     | nevents: 400
[2025-10-18 14:33:21] 2025-10-18 18:32:56,361 | INFO     | neventsw: 0
[2025-10-18 14:33:21] 2025-10-18 18:32:56,362 | INFO     | pid: 23540
[2025-10-18 14:33:21] 2025-10-18 18:32:56,362 | INFO     | pgrp: 23540
[2025-10-18 14:33:21] 2025-10-18 18:32:56,362 | INFO     | corecount: 12
[2025-10-18 14:33:21] 2025-10-18 18:32:56,362 | INFO     | event service: False
[2025-10-18 14:33:21] 2025-10-18 18:32:56,362 | INFO     | sizes: {0: 2348625, 1: 2348824, 5: 2349086, 11: 2349142, 3499: 2374716, 3500: 2383714, 3503: 2383898, 3509: 2384124}
[2025-10-18 14:33:21] 2025-10-18 18:32:56,362 | INFO     | --------------------------------------------------
[2025-10-18 14:33:21] 2025-10-18 18:32:56,363 | INFO     | 
[2025-10-18 14:33:21] 2025-10-18 18:32:56,363 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 14:33:21] 2025-10-18 18:32:56,388 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,388 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,388 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,388 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,389 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,389 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,389 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,389 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,389 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,389 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,390 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,390 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,390 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,390 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,390 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,390 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,391 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,391 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 14:33:21] 2025-10-18 18:32:56,391 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,391 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 14:33:21] 2025-10-18 18:32:56,391 | INFO     | job 6850176149 has completed (purged errors)
[2025-10-18 14:33:21] 2025-10-18 18:32:56,392 | INFO     | overall cleanup function is called
[2025-10-18 14:33:21] 2025-10-18 18:32:57,400 | INFO     | --- collectZombieJob: --- 10, [23540]
[2025-10-18 14:33:21] 2025-10-18 18:32:57,400 | INFO     | zombie collector waiting for pid 23540
[2025-10-18 14:33:21] 2025-10-18 18:32:57,400 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 14:33:21] 2025-10-18 18:32:57,400 | INFO     | collected zombie processes
[2025-10-18 14:33:21] 2025-10-18 18:32:57,401 | INFO     | will attempt to kill all subprocesses of pid=23540
[2025-10-18 14:33:21] 2025-10-18 18:32:57,491 | INFO     | process IDs to be killed: [23540] (in reverse order)
[2025-10-18 14:33:21] 2025-10-18 18:32:57,549 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 14:33:21] 2025-10-18 18:32:57,549 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 14:33:21] 2025-10-18 18:32:57,553 | INFO     | did not find any defunct processes belonging to 23540
[2025-10-18 14:33:21] 2025-10-18 18:32:57,556 | INFO     | did not find any defunct processes belonging to 23540
[2025-10-18 14:33:21] 2025-10-18 18:32:57,556 | INFO     | ready for new job
[2025-10-18 14:33:21] 2025-10-18 18:32:57,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 14:33:21] 2025-10-18 18:32:57,558 | INFO     | ***************************************
[2025-10-18 14:33:21] 2025-10-18 18:32:57,558 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 14:33:21] 2025-10-18 18:32:57,558 | INFO     | ***************************************
[2025-10-18 14:33:21] 2025-10-18 18:32:57,558 | INFO     | 
[2025-10-18 14:33:21] 2025-10-18 18:32:57,559 | INFO     | architecture information:
[2025-10-18 14:33:21] 2025-10-18 18:32:57,559 | INFO     | executing command: cat /etc/os-release
[2025-10-18 14:33:21] 2025-10-18 18:32:57,573 | INFO     | cat /etc/os-release:
[2025-10-18 14:33:21] NAME="CentOS Linux"
[2025-10-18 14:33:21] VERSION="7 (Core)"
[2025-10-18 14:33:21] ID="centos"
[2025-10-18 14:33:21] ID_LIKE="rhel fedora"
[2025-10-18 14:33:21] VERSION_ID="7"
[2025-10-18 14:33:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 14:33:21] ANSI_COLOR="0;31"
[2025-10-18 14:33:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 14:33:21] HOME_URL="https://www.centos.org/"
[2025-10-18 14:33:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 14:33:21] 
[2025-10-18 14:33:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 14:33:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 14:33:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 14:33:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 14:33:21] 
[2025-10-18 14:33:21] 2025-10-18 18:32:57,573 | INFO     | ***************************************
[2025-10-18 14:33:21] 2025-10-18 18:32:58,076 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 14:33:21] 2025-10-18 18:32:58,094 | INFO     | sufficient remaining disk space (29474422784 B)
[2025-10-18 14:33:21] 2025-10-18 18:32:58,094 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 14:33:21] 2025-10-18 18:32:58,094 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 14:33:21] 2025-10-18 18:32:58,094 | INFO     | update_server=False
[2025-10-18 14:33:21] 2025-10-18 18:32:58,094 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 14:33:21] 2025-10-18 18:32:58,095 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-18 14:33:21] 2025-10-18 18:32:58,095 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 14:33:21] 2025-10-18 18:32:58,095 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 14:33:21] 2025-10-18 18:32:58,096 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 14:33:21] 2025-10-18 18:32:58,096 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 14:33:21] 2025-10-18 18:32:58,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 14:33:21] 2025-10-18 18:32:58,096 | INFO     | aborting loop
[2025-10-18 14:33:21] 2025-10-18 18:32:58,097 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 14:33:21] 2025-10-18 18:32:58,783 | INFO     | all data control threads have been joined
[2025-10-18 14:33:21] 2025-10-18 18:32:59,100 | INFO     | [job] retrieve thread has finished
[2025-10-18 14:33:21] 2025-10-18 18:32:59,102 | INFO     | [job] queue monitor thread has finished
[2025-10-18 14:33:21] 2025-10-18 18:32:59,102 | INFO     | [job] job monitor thread has finished
[2025-10-18 14:33:21] 2025-10-18 18:32:59,122 | INFO     | [payload] failed_post thread has finished
[2025-10-18 14:33:21] 2025-10-18 18:32:59,225 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 14:33:21] 2025-10-18 18:32:59,272 | INFO     | all payload control threads have been joined
[2025-10-18 14:33:21] 2025-10-18 18:32:59,652 | INFO     | [job] validate thread has finished
[2025-10-18 14:33:21] 2025-10-18 18:32:59,727 | INFO     | all job control threads have been joined
[2025-10-18 14:33:21] 2025-10-18 18:32:59,784 | INFO     | [data] control thread has finished
[2025-10-18 14:33:21] 2025-10-18 18:32:59,855 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 14:33:21] 2025-10-18 18:33:00,102 | INFO     | [data] copytool_out thread has finished
[2025-10-18 14:33:21] 2025-10-18 18:33:00,108 | INFO     | [payload] validate_post thread has finished
[2025-10-18 14:33:21] 2025-10-18 18:33:00,113 | INFO     | [data] copytool_in thread has finished
[2025-10-18 14:33:21] 2025-10-18 18:33:00,113 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 14:33:21] 2025-10-18 18:33:00,276 | INFO     | [payload] control thread has finished
[2025-10-18 14:33:21] 2025-10-18 18:33:00,732 | INFO     | [job] control thread has finished
[2025-10-18 14:33:21] 2025-10-18 18:33:00,748 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 14:33:21] 2025-10-18 18:33:04,754 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 14:33:21] 2025-10-18 18:33:08,861 | INFO     | job.realtimelogging is not enabled
[2025-10-18 14:33:21] 2025-10-18 18:33:09,866 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 14:33:21] 2025-10-18 18:33:15,704 | INFO     | [monitor] cgroup control has ended
[2025-10-18 14:33:21] 2025-10-18 18:33:16,657 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140264076941120)>', '<ExcThread(monitor, started 140263849600768)>']
[2025-10-18 14:33:21] 2025-10-18 18:33:17,195 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 14:33:21] 2025-10-18 18:33:17,195 | INFO     | [monitor] control thread has ended
[2025-10-18 14:33:21] 2025-10-18 18:33:21,665 | INFO     | all workflow threads have been joined
[2025-10-18 14:33:21] 2025-10-18 18:33:21,665 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 14:33:21] 2025-10-18 18:33:21,665 | INFO     | traces error code: 0
[2025-10-18 14:33:21] 2025-10-18 18:33:21,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 14:33:21] 2025-10-18 18:33:21,752 [wrapper] ==== pilot stdout END ====
[2025-10-18 14:33:21] 2025-10-18 18:33:21,756 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 14:33:21] 2025-10-18 18:33:21,759 [wrapper] pilotpid: 17157
[2025-10-18 14:33:21] 2025-10-18 18:33:21,763 [wrapper] Pilot exit status: 0
[2025-10-18 14:33:21] 2025-10-18 18:33:21,777 [wrapper] pandaids: 6850176149
[2025-10-18 14:33:21] 2025-10-18 18:33:21,814 [wrapper] cleanup supervisor_pilot 25873 17158
[2025-10-18 14:33:21] 2025-10-18 18:33:21,818 [wrapper] Test setup, not cleaning
[2025-10-18 14:33:21] 2025-10-18 18:33:21,821 [wrapper] apfmon messages muted
[2025-10-18 14:33:21] 2025-10-18 18:33:21,825 [wrapper] ==== wrapper stdout END ====
[2025-10-18 14:33:21] 2025-10-18 18:33:21,828 [wrapper] ==== wrapper stderr END ====
[2025-10-18 14:33:21]  *** Error codes and diagnostics ***
[2025-10-18 14:33:21]     "exeErrorCode": 0,
[2025-10-18 14:33:21]     "exeErrorDiag": "",
[2025-10-18 14:33:21]     "pilotErrorCode": 0,
[2025-10-18 14:33:21]     "pilotErrorDiag": "",
[2025-10-18 14:33:21]  *** Listing of results directory ***
[2025-10-18 14:33:21] total 331792
[2025-10-18 14:33:21] -rw-r--r-- 1 boincer umatlas    557409 Oct 18 08:53 pilot3.tar.gz
[2025-10-18 14:33:21] -rw-r--r-- 1 boincer umatlas      5112 Oct 18 08:55 queuedata.json
[2025-10-18 14:33:21] -rwx------ 1 boincer umatlas     36292 Oct 18 08:56 runpilot2-wrapper.sh
[2025-10-18 14:33:21] -rw-r--r-- 1 boincer umatlas       100 Oct 18 13:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 14:33:21] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 13:33 run_atlas
[2025-10-18 14:33:21] -rw-r--r-- 1 boincer umatlas       105 Oct 18 13:33 job.xml
[2025-10-18 14:33:21] -rw-r--r-- 2 boincer umatlas 190092091 Oct 18 13:33 EVNT.46808900._000080.pool.root.1
[2025-10-18 14:33:21] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 13:33 start_atlas.sh
[2025-10-18 14:33:21] drwxrwx--x 2 boincer umatlas      4096 Oct 18 13:33 shared
[2025-10-18 14:33:21] -rw-r--r-- 2 boincer umatlas    569673 Oct 18 13:33 input.tar.gz
[2025-10-18 14:33:21] -rw-r--r-- 1 boincer umatlas         0 Oct 18 13:33 boinc_lockfile
[2025-10-18 14:33:21] -rw-r--r-- 1 boincer umatlas      2501 Oct 18 13:33 pandaJob.out
[2025-10-18 14:33:21] -rw------- 1 boincer umatlas    976742 Oct 18 13:34 agis_schedconf.cvmfs.json
[2025-10-18 14:33:21] -rw------- 1 boincer umatlas   1560740 Oct 18 13:34 agis_ddmendpoints.agis.ALL.json
[2025-10-18 14:33:21] drwx------ 5 boincer umatlas      4096 Oct 18 13:34 pilot3
[2025-10-18 14:33:21] -rw-r--r-- 1 boincer umatlas      5953 Oct 18 14:27 init_data.xml
[2025-10-18 14:33:21] -rw------- 1 boincer umatlas 143972931 Oct 18 14:32 HITS.46808902._001929.pool.root.1
[2025-10-18 14:33:21] -rw------- 1 boincer umatlas      1050 Oct 18 14:32 memory_monitor_summary.json
[2025-10-18 14:33:21] -rw-r--r-- 1 boincer umatlas       529 Oct 18 14:32 boinc_task_state.xml
[2025-10-18 14:33:21] -rw------- 1 boincer umatlas    368840 Oct 18 14:32 log.46808902._001929.job.log.tgz.1
[2025-10-18 14:33:21] -rw------- 1 boincer umatlas        95 Oct 18 14:32 pilot_heartbeat.json
[2025-10-18 14:33:21] -rw------- 1 boincer umatlas      7848 Oct 18 14:32 heartbeat.json
[2025-10-18 14:33:21] -rw-r--r-- 1 boincer umatlas        27 Oct 18 14:33 wrapper_checkpoint.txt
[2025-10-18 14:33:21] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 14:33 boinc_mmap_file
[2025-10-18 14:33:21] -rw------- 1 boincer umatlas      4624 Oct 18 14:33 pilotlog.txt
[2025-10-18 14:33:21] -rw------- 1 boincer umatlas    522147 Oct 18 14:33 log.46808902._001929.job.log.1
[2025-10-18 14:33:21] -rw------- 1 boincer umatlas       357 Oct 18 14:33 output.list
[2025-10-18 14:33:21] -rw-r--r-- 1 boincer umatlas       620 Oct 18 14:33 runtime_log
[2025-10-18 14:33:21] -rw------- 1 boincer umatlas    911360 Oct 18 14:33 result.tar.gz
[2025-10-18 14:33:21] -rw-r--r-- 1 boincer umatlas      8705 Oct 18 14:33 runtime_log.err
[2025-10-18 14:33:21] -rw------- 1 boincer umatlas       658 Oct 18 14:33 5HLLDmoeLU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmoDcMDmQ4Jc6m.diag
[2025-10-18 14:33:21] -rw-r--r-- 1 boincer umatlas     22191 Oct 18 14:33 stderr.txt
[2025-10-18 14:33:21] HITS file was successfully produced:
[2025-10-18 14:33:21] -rw------- 1 boincer umatlas 143972931 Oct 18 14:32 shared/HITS.pool.root.1
[2025-10-18 14:33:21]  *** Contents of shared directory: ***
[2025-10-18 14:33:21] total 327712
[2025-10-18 14:33:21] -rw-r--r-- 2 boincer umatlas 190092091 Oct 18 13:33 ATLAS.root_0
[2025-10-18 14:33:21] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 13:33 start_atlas.sh
[2025-10-18 14:33:21] -rw-r--r-- 2 boincer umatlas    569673 Oct 18 13:33 input.tar.gz
[2025-10-18 14:33:21] -rw------- 1 boincer umatlas 143972931 Oct 18 14:32 HITS.pool.root.1
[2025-10-18 14:33:21] -rw------- 1 boincer umatlas    911360 Oct 18 14:33 result.tar.gz
14:33:23 (13446): run_atlas exited; CPU time 35310.279731
14:33:23 (13446): called boinc_finish(0)

</stderr_txt>
]]>

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