Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-18 10:32:02 (11484): vboxwrapper version 26210
2025-10-18 10:32:02 (11484): BOINC client version: 8.2.4
2025-10-18 10:32:04 (11484): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2025-10-18 10:32:04 (11484): Successfully copied 'init_data.xml' to the shared directory.
2025-10-18 10:32:05 (11484): Create VM. (boinc_fe233e77a2c36807, slot#5)
2025-10-18 10:32:06 (11484): Setting Memory Size for VM. (4300MB)
2025-10-18 10:32:06 (11484): Setting CPU Count for VM. (3)
2025-10-18 10:32:06 (11484): Setting Chipset Options for VM.
2025-10-18 10:32:07 (11484): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-18 10:32:07 (11484): Setting Boot Options for VM.
2025-10-18 10:32:08 (11484): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-18 10:32:08 (11484): Enabling VM Network Access.
2025-10-18 10:32:09 (11484): Disabling USB Support for VM.
2025-10-18 10:32:09 (11484): Disabling COM Port Support for VM.
2025-10-18 10:32:09 (11484): Disabling LPT Port Support for VM.
2025-10-18 10:32:10 (11484): Disabling Audio Support for VM.
2025-10-18 10:32:10 (11484): Disabling Clipboard Support for VM.
2025-10-18 10:32:10 (11484): Disabling Drag and Drop Support for VM.
2025-10-18 10:32:11 (11484): Adding storage controller(s) to VM.
2025-10-18 10:32:11 (11484): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-18 10:32:13 (11484): Adding VirtualBox Guest Additions to VM.
2025-10-18 10:32:14 (11484): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-18 10:32:14 (11484): forwarding host port 61476 to guest port 80
2025-10-18 10:32:14 (11484): Enabling remote desktop for VM.
2025-10-18 10:32:15 (11484): Enabling shared directory for VM.
2025-10-18 10:32:16 (11484): Starting VM using VBoxManage interface. (boinc_fe233e77a2c36807, slot#5)
2025-10-18 10:32:27 (11484): Successfully started VM. (PID = '10016')
2025-10-18 10:32:27 (11484): Reporting VM Process ID to BOINC.
2025-10-18 10:32:27 (11484): Guest Log: BIOS: VirtualBox 7.1.10
2025-10-18 10:32:27 (11484): Guest Log: CPUID EDX: 0x178bfbff
2025-10-18 10:32:27 (11484): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-18 10:32:27 (11484): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-18 10:32:27 (11484): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-18 10:32:27 (11484): Detected: Web Application Enabled (http://localhost:61476)
2025-10-18 10:32:27 (11484): Detected: Remote Desktop Enabled (localhost:61478)
2025-10-18 10:32:27 (11484): Preference change detected
2025-10-18 10:32:27 (11484): Setting CPU throttle for VM. (100%)
2025-10-18 10:32:27 (11484): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-18 10:32:29 (11484): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-18 10:32:29 (11484): Guest Log: BIOS: Booting from Hard Disk...
2025-10-18 10:32:33 (11484): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-18 10:32:33 (11484): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-18 10:32:33 (11484): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-18 10:32:44 (11484): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-18 10:32:44 (11484): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-18 10:33:04 (11484): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-18 10:33:04 (11484): Guest Log: 00:00:00.000248 main     Log opened 2025-10-18T10:33:02.437235000Z
2025-10-18 10:33:04 (11484): Guest Log: 00:00:00.000447 main     OS Product: Linux
2025-10-18 10:33:04 (11484): Guest Log: 00:00:00.000513 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-18 10:33:04 (11484): Guest Log: 00:00:00.000574 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-18 10:33:04 (11484): Guest Log: 00:00:00.000637 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-18 10:33:04 (11484): Guest Log: 00:00:00.000639 main     Process ID: 1301
2025-10-18 10:33:04 (11484): Guest Log: 00:00:00.000640 main     Package type: LINUX_64BITS_GENERIC
2025-10-18 10:33:04 (11484): Guest Log: 00:00:00.002709 main     5.2.32 r132073 started. Verbose level = 0
2025-10-18 10:33:05 (11484): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-18 10:33:05 (11484): Guest Log: [INFO] Mounting shared directory
2025-10-18 10:33:06 (11484): Guest Log: [INFO] Checking for init_data.xml
2025-10-18 10:33:14 (11484): Guest Log: 00:00:10.015326 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 089 337 000ns (GuestNow=1 760 808 793 532 239 000 ns GuestLast=1 760 783 582 442 902 000 ns fSetTimeLastLoop=true )
2025-10-18 10:33:21 (11484): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-18 10:33:21 (11484): Guest Log: [INFO] Detected branch: prod
2025-10-18 10:33:22 (11484): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-18 10:33:22 (11484): Guest Log: Copying input files
2025-10-18 10:33:24 (11484): Guest Log: Copied input files into RunAtlas.
2025-10-18 10:33:24 (11484): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-18 10:33:24 (11484): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-18 10:33:24 (11484): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-18 10:33:24 (11484): Guest Log: Further information can be found at the LHC@home message board.
2025-10-18 10:33:35 (11484): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-18 10:33:35 (11484): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-18 10:33:35 (11484): Guest Log: 2.6.3.0 1605 0 32192 151859 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-18 10:33:40 (11484): Guest Log: copied the webapp to /var/www
2025-10-18 10:33:40 (11484): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-18 10:33:40 (11484): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-18 10:33:40 (11484): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-18 10:33:40 (11484): Guest Log:  *** Starting ATLAS job. (PandaID=6850193672 taskID=46808902) ***
2025-10-18 12:12:35 (11484): Status Report: Elapsed Time: '6000.000000'
2025-10-18 12:12:35 (11484): Status Report: CPU Time: '15810.734375'
2025-10-18 13:52:45 (11484): Status Report: Elapsed Time: '12000.000000'
2025-10-18 13:52:45 (11484): Status Report: CPU Time: '33638.468750'
2025-10-18 15:32:54 (11484): Status Report: Elapsed Time: '18000.000000'
2025-10-18 15:32:54 (11484): Status Report: CPU Time: '51429.578125'
2025-10-18 17:13:03 (11484): Status Report: Elapsed Time: '24000.000000'
2025-10-18 17:13:03 (11484): Status Report: CPU Time: '69266.062500'
2025-10-18 18:12:48 (11484): Guest Log:  *** Job finished ***
2025-10-18 18:12:48 (11484): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:31,397 | INFO     | [job] queue monitor thread has finished
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:31,692 | INFO     | [data] queue_monitor thread has finished
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:37,865 | INFO     | [monitor] cgroup control has ended
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:39,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140031857280832)>', '<ExcThread(monitor, started 140031435994880)>']
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:40,761 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:40,761 | INFO     | [monitor] control thread has ended
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:44,972 | INFO     | all workflow threads have been joined
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:44,972 | INFO     | end of generic workflow (traces error code: 0)
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:44,972 | INFO     | traces error code: 0
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:44,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:45,197 [wrapper] ==== pilot stdout END ====
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:45,207 [wrapper] ==== wrapper stdout RESUME ====
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:45,215 [wrapper] pilotpid: 5986
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:45,223 [wrapper] Pilot exit status: 0
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:45,830 [wrapper] pandaids: 6850193672
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:45,876 [wrapper] cleanup supervisor_pilot  2385 5987
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:45,887 [wrapper] Test setup, not cleaning
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:45,896 [wrapper] apfmon messages muted
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:45,904 [wrapper] ==== wrapper stdout END ====
2025-10-18 18:12:48 (11484): Guest Log: 2025-10-19 01:12:45,911 [wrapper] ==== wrapper stderr END ====
2025-10-18 18:12:48 (11484): Guest Log:  *** Error codes and diagnostics ***
2025-10-18 18:12:48 (11484): Guest Log:     "exeErrorCode": 0,
2025-10-18 18:12:48 (11484): Guest Log:     "exeErrorDiag": "",
2025-10-18 18:12:48 (11484): Guest Log:     "pilotErrorCode": 0,
2025-10-18 18:12:48 (11484): Guest Log:     "pilotErrorDiag": "",
2025-10-18 18:12:48 (11484): Guest Log:  *** Listing of results directory ***
2025-10-18 18:12:48 (11484): Guest Log: total 157780
2025-10-18 18:12:48 (11484): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 18 12:53 pilot3.tar.gz
2025-10-18 18:12:48 (11484): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 18 13:10 runpilot2-wrapper.sh
2025-10-18 18:12:48 (11484): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 18 13:10 queuedata.json
2025-10-18 18:12:48 (11484): Guest Log: -rwxr-xr-x. 1 atlas atlas      7742 Oct 18 17:33 init_data.xml
2025-10-18 18:12:48 (11484): Guest Log: -rwxr-xr-x. 1 atlas atlas    569672 Oct 18 17:33 input.tar.gz
2025-10-18 18:12:48 (11484): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 18 17:33 start_atlas.sh
2025-10-18 18:12:48 (11484): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 18 17:33 EVNT.46808900._000013.pool.root.1 -> /data/./ATLAS.root_0
2025-10-18 18:12:48 (11484): Guest Log: -rw-r--r--. 1 atlas atlas      2499 Oct 18 17:33 pandaJob.out
2025-10-18 18:12:48 (11484): Guest Log: -rw-------. 1 atlas atlas    976742 Oct 18 17:35 agis_schedconf.cvmfs.json
2025-10-18 18:12:48 (11484): Guest Log: drwx------. 5 atlas atlas      4096 Oct 18 17:35 pilot3
2025-10-18 18:12:48 (11484): Guest Log: -rw-------. 1 atlas atlas 149330456 Oct 19 01:11 HITS.46808902._002045.pool.root.1
2025-10-18 18:12:48 (11484): Guest Log: -rw-------. 1 atlas atlas        95 Oct 19 01:11 pilot_heartbeat.json
2025-10-18 18:12:48 (11484): Guest Log: -rw-------. 1 atlas atlas      1030 Oct 19 01:12 memory_monitor_summary.json
2025-10-18 18:12:48 (11484): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 19 01:12 agis_ddmendpoints.agis.ALL.json
2025-10-18 18:12:48 (11484): Guest Log: -rw-------. 1 atlas atlas    568485 Oct 19 01:12 log.46808902._002045.job.log.tgz.1
2025-10-18 18:12:48 (11484): Guest Log: -rw-------. 1 atlas atlas      7792 Oct 19 01:12 heartbeat.json
2025-10-18 18:12:48 (11484): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 19 01:12 pilotlog.txt
2025-10-18 18:12:48 (11484): Guest Log: -rw-------. 1 atlas atlas   3635797 Oct 19 01:12 log.46808902._002045.job.log.1
2025-10-18 18:12:48 (11484): Guest Log: -rw-------. 1 atlas atlas       357 Oct 19 01:12 output.list
2025-10-18 18:12:48 (11484): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 19 01:12 runtime_log
2025-10-18 18:12:48 (11484): Guest Log: -rw-------. 1 atlas atlas   4218880 Oct 19 01:12 result.tar.gz
2025-10-18 18:12:48 (11484): Guest Log: -rw-r--r--. 1 atlas atlas      8618 Oct 19 01:12 runtime_log.err
2025-10-18 18:12:48 (11484): Guest Log: -rw-------. 1 atlas atlas       654 Oct 19 01:12 LcGODmfsLU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxHxNDmKZuxHo.diag
2025-10-18 18:12:48 (11484): Guest Log: Looking for outputfile HITS.46808902._002045.pool.root.1
2025-10-18 18:12:48 (11484): Guest Log: HITS file was successfully produced
2025-10-18 18:12:48 (11484): Guest Log: -rw-------. 1 atlas atlas 149330456 Oct 19 01:11 /home/atlas/RunAtlas/HITS.46808902._002045.pool.root.1
2025-10-18 18:12:50 (11484): Guest Log: Successfully finished the ATLAS job!
2025-10-18 18:12:50 (11484): Guest Log: Copying the results back to the shared directory!
2025-10-18 18:12:50 (11484): Guest Log:  *** Contents of shared directory: ***
2025-10-18 18:12:50 (11484): Guest Log: total 335692
2025-10-18 18:12:50 (11484): Guest Log: -rwxrwxrwx. 1 root root 189598929 Oct 18 17:32 ATLAS.root_0
2025-10-18 18:12:50 (11484): Guest Log: -rwxrwxrwx. 1 root root 149330456 Oct 19 01:12 HITS.pool.root.1
2025-10-18 18:12:50 (11484): Guest Log: -rwxrwxrwx. 1 root root      7742 Oct 18 17:32 init_data.xml
2025-10-18 18:12:50 (11484): Guest Log: -rwxrwxrwx. 1 root root    569672 Oct 18 17:27 input.tar.gz
2025-10-18 18:12:50 (11484): Guest Log: -rwxrwxrwx. 1 root root   4218880 Oct 19 01:12 result.tar.gz
2025-10-18 18:12:50 (11484): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 18 17:27 start_atlas.sh
2025-10-18 18:12:50 (11484): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-18 18:12:50 (11484): VM Completion File Detected.
2025-10-18 18:12:50 (11484): Powering off VM.
2025-10-18 18:12:51 (11484): Successfully stopped VM.
2025-10-18 18:12:51 (11484): Deregistering VM. (boinc_fe233e77a2c36807, slot#5)
2025-10-18 18:12:51 (11484): Removing network bandwidth throttle group from VM.
2025-10-18 18:12:51 (11484): Removing VM from VirtualBox.
2025-10-18 18:12:57 (11484): called boinc_finish(0)

</stderr_txt>
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