Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:57:31 (30756): wrapper (7.7.26015): starting
04:57:31 (30756): wrapper: running run_atlas (--nthreads 8)
[2025-10-19 04:57:31] Arguments: --nthreads 8
[2025-10-19 04:57:31] Threads: 8
[2025-10-19 04:57:31] Checking for CVMFS
[2025-10-19 04:57:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 04:57:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 04:57:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 04:57:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 04:57:34] 2.11.2.0 24698 116885 118852 151872 0 61 21349030 25165824 4634 130560 0 41923621 99.915 18144654 2343 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-19 04:57:34] CVMFS is ok
[2025-10-19 04:57:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 04:57:34] Checking for apptainer binary...
[2025-10-19 04:57:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 04:57:34] Running /usr/bin/apptainer --version
[2025-10-19 04:57:34] apptainer version 1.3.2-1.el7
[2025-10-19 04:57:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 04:57:41] cg-vwn342.simple-grid.lan
[2025-10-19 04:57:41] apptainer works
[2025-10-19 04:57:42] Set ATHENA_PROC_NUMBER=8
[2025-10-19 04:57:42] Set ATHENA_CORE_NUMBER=8
[2025-10-19 04:57:42] Starting ATLAS job with PandaID=6848019393
[2025-10-19 04:57:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 09:26:47]  *** The last 200 lines of the pilot log: ***
[2025-10-19 09:26:47] 2025-10-19 07:25:34,916 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 09:26:47] 2025-10-19 07:25:36,165 | INFO     | time since job start (15868s) is within the limit (172800.0s)
[2025-10-19 09:26:47] 2025-10-19 07:25:36,601 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-19 09:26:47] 2025-10-19 07:25:36,602 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-10-19 09:26:47] 2025-10-19 07:25:36,604 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6848019393/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 09:26:47] 2025-10-19 07:25:36,605 | INFO     | extracted standard info from prmon json
[2025-10-19 09:26:47] 2025-10-19 07:25:36,605 | INFO     | extracted standard memory fields from prmon json
[2025-10-19 09:26:47] 2025-10-19 07:25:36,605 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-19 09:26:47] 2025-10-19 07:25:36,605 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-19 09:26:47] 2025-10-19 07:25:36,605 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-19 09:26:47] 2025-10-19 07:25:36,611 | INFO     | fitting pss+swap vs Time
[2025-10-19 09:26:47] 2025-10-19 07:25:36,612 | INFO     | sum of square deviations: 4903347750.0
[2025-10-19 09:26:47] 2025-10-19 07:25:36,614 | INFO     | sum of deviations: 81271173032.0
[2025-10-19 09:26:47] 2025-10-19 07:25:36,618 | INFO     | mean x: 1760850970.0
[2025-10-19 09:26:47] 2025-10-19 07:25:36,618 | INFO     | mean y: 2441633.0
[2025-10-19 09:26:47] 2025-10-19 07:25:36,618 | INFO     | -- intersect: -29183011074.578217
[2025-10-19 09:26:47] 2025-10-19 07:25:36,618 | INFO     | intersect: -29183011074.578217
[2025-10-19 09:26:47] 2025-10-19 07:25:36,618 | INFO     | chi2: 5.234361647399702
[2025-10-19 09:26:47] 2025-10-19 07:25:36,619 | INFO     | sum of square deviations: 4616114457.5
[2025-10-19 09:26:47] 2025-10-19 07:25:36,621 | INFO     | sum of deviations: 95995427268.99998
[2025-10-19 09:26:47] 2025-10-19 07:25:36,621 | INFO     | mean x: 1760850817.5
[2025-10-19 09:26:47] 2025-10-19 07:25:36,622 | INFO     | mean y: 2449307.9918699185
[2025-10-19 09:26:47] 2025-10-19 07:25:36,622 | INFO     | -- intersect: -36615712598.33699
[2025-10-19 09:26:47] 2025-10-19 07:25:36,622 | INFO     | intersect: -36615712598.33699
[2025-10-19 09:26:47] 2025-10-19 07:25:36,622 | INFO     | chi2: 4.493259294786339
[2025-10-19 09:26:47] 2025-10-19 07:25:36,622 | INFO     | current chi2=4.493259294786339 (change=14.158409420975412 %)
[2025-10-19 09:26:47] 2025-10-19 07:25:36,622 | INFO     | right removable region: 245
[2025-10-19 09:26:47] 2025-10-19 07:25:36,623 | INFO     | sum of square deviations: 4616114457.5
[2025-10-19 09:26:47] 2025-10-19 07:25:36,625 | INFO     | sum of deviations: -2088777707.5000114
[2025-10-19 09:26:47] 2025-10-19 07:25:36,625 | INFO     | mean x: 1760851122.5
[2025-10-19 09:26:47] 2025-10-19 07:25:36,625 | INFO     | mean y: 2485827.2398373983
[2025-10-19 09:26:47] 2025-10-19 07:25:36,626 | INFO     | -- intersect: 799265587.5268736
[2025-10-19 09:26:47] 2025-10-19 07:25:36,626 | INFO     | intersect: 799265587.5268736
[2025-10-19 09:26:47] 2025-10-19 07:25:36,626 | INFO     | chi2: 0.9408310255358738
[2025-10-19 09:26:47] 2025-10-19 07:25:36,626 | INFO     | current chi2=0.9408310255358738 (change=82.02586888501952 %)
[2025-10-19 09:26:47] 2025-10-19 07:25:36,627 | INFO     | sum of square deviations: 4340323240.0
[2025-10-19 09:26:47] 2025-10-19 07:25:36,629 | INFO     | sum of deviations: -13261958333.0
[2025-10-19 09:26:47] 2025-10-19 07:25:36,629 | INFO     | mean x: 1760851275.0
[2025-10-19 09:26:47] 2025-10-19 07:25:36,629 | INFO     | mean y: 2491987.3692946057
[2025-10-19 09:26:47] 2025-10-19 07:25:36,629 | INFO     | -- intersect: 5382813900.826579
[2025-10-19 09:26:47] 2025-10-19 07:25:36,630 | INFO     | intersect: 5382813900.826579
[2025-10-19 09:26:47] 2025-10-19 07:25:36,630 | INFO     | chi2: 0.848447533675827
[2025-10-19 09:26:47] 2025-10-19 07:25:36,630 | INFO     | current chi2=0.848447533675827 (change=9.819350058893676 %)
[2025-10-19 09:26:47] 2025-10-19 07:25:36,630 | INFO     | left removable region: 20
[2025-10-19 09:26:47] 2025-10-19 07:25:36,631 | INFO     | sum of square deviations: 3531973200.0
[2025-10-19 09:26:47] 2025-10-19 07:25:36,633 | INFO     | sum of deviations: -4976046452.0
[2025-10-19 09:26:47] 2025-10-19 07:25:36,633 | INFO     | mean x: 1760851397.0
[2025-10-19 09:26:47] 2025-10-19 07:25:36,633 | INFO     | mean y: 2505675.302222222
[2025-10-19 09:26:47] 2025-10-19 07:25:36,633 | INFO     | -- intersect: 2483294132.740431
[2025-10-19 09:26:47] 2025-10-19 07:25:36,633 | INFO     | intersect: 2483294132.740431
[2025-10-19 09:26:47] 2025-10-19 07:25:36,634 | INFO     | chi2: 0.005235854720928154
[2025-10-19 09:26:47] 2025-10-19 07:25:36,634 | INFO     | -- intersect: 2483294132.740431
[2025-10-19 09:26:47] 2025-10-19 07:25:36,634 | INFO     | current memory leak: -1.41 B/s (using 225 data points, chi2=0.01)
[2025-10-19 09:26:47] 2025-10-19 07:25:36,635 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-19 09:26:47] 2025-10-19 07:25:36,635 | INFO     | ..............................
[2025-10-19 09:26:47] 2025-10-19 07:25:36,635 | INFO     | . Timing measurements:
[2025-10-19 09:26:47] 2025-10-19 07:25:36,635 | INFO     | . get job = 0 s
[2025-10-19 09:26:47] 2025-10-19 07:25:36,635 | INFO     | . initial setup = 5 s
[2025-10-19 09:26:47] 2025-10-19 07:25:36,635 | INFO     | . payload setup = 138 s
[2025-10-19 09:26:47] 2025-10-19 07:25:36,636 | INFO     | . stage-in = 0 s
[2025-10-19 09:26:47] 2025-10-19 07:25:36,636 | INFO     | . payload execution = 15442 s
[2025-10-19 09:26:47] 2025-10-19 07:25:36,636 | INFO     | . stage-out = 4 s
[2025-10-19 09:26:47] 2025-10-19 07:25:36,636 | INFO     | . log creation = 1 s
[2025-10-19 09:26:47] 2025-10-19 07:25:36,636 | INFO     | ..............................
[2025-10-19 09:26:47] 2025-10-19 07:25:36,778 | INFO     | 
[2025-10-19 09:26:47] 2025-10-19 07:25:36,779 | INFO     | job summary report
[2025-10-19 09:26:47] 2025-10-19 07:25:36,779 | INFO     | --------------------------------------------------
[2025-10-19 09:26:47] 2025-10-19 07:25:36,779 | INFO     | PanDA job id: 6848019393
[2025-10-19 09:26:47] 2025-10-19 07:25:36,779 | INFO     | task id: 46771637
[2025-10-19 09:26:47] 2025-10-19 07:25:36,779 | INFO     | errors: (none)
[2025-10-19 09:26:47] 2025-10-19 07:25:36,779 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-19 09:26:47] 2025-10-19 07:25:36,779 | INFO     | pilot state: finished 
[2025-10-19 09:26:47] 2025-10-19 07:25:36,779 | INFO     | transexitcode: 0
[2025-10-19 09:26:47] 2025-10-19 07:25:36,779 | INFO     | exeerrorcode: 0
[2025-10-19 09:26:47] 2025-10-19 07:25:36,779 | INFO     | exeerrordiag: 
[2025-10-19 09:26:47] 2025-10-19 07:25:36,779 | INFO     | exitcode: 0
[2025-10-19 09:26:47] 2025-10-19 07:25:36,780 | INFO     | exitmsg: OK
[2025-10-19 09:26:47] 2025-10-19 07:25:36,780 | INFO     | cpuconsumptiontime: 57029 s
[2025-10-19 09:26:47] 2025-10-19 07:25:36,780 | INFO     | nevents: 400
[2025-10-19 09:26:47] 2025-10-19 07:25:36,780 | INFO     | neventsw: 0
[2025-10-19 09:26:47] 2025-10-19 07:25:36,780 | INFO     | pid: 8755
[2025-10-19 09:26:47] 2025-10-19 07:25:36,780 | INFO     | pgrp: 8755
[2025-10-19 09:26:47] 2025-10-19 07:25:36,780 | INFO     | corecount: 8
[2025-10-19 09:26:47] 2025-10-19 07:25:36,780 | INFO     | event service: False
[2025-10-19 09:26:47] 2025-10-19 07:25:36,780 | INFO     | sizes: {0: 2348756, 1: 2348955, 12: 2348955, 22: 2348983, 33: 2349011, 44: 2349067, 55: 2349223, 65: 2349251, 76: 2349279, 87: 2349335, 91: 2349625, 97: 2349933, 1
[2025-10-19 09:26:47] 2025-10-19 07:25:36,780 | INFO     | --------------------------------------------------
[2025-10-19 09:26:47] 2025-10-19 07:25:36,780 | INFO     | 
[2025-10-19 09:26:47] 2025-10-19 07:25:36,780 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-10-19 09:26:47] 2025-10-19 07:25:37,334 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,334 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,334 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,335 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,335 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,335 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,335 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,335 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,335 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,335 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,335 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,335 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,336 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,336 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,336 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,336 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-19 09:26:47] 2025-10-19 07:25:37,336 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,336 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-19 09:26:47] 2025-10-19 07:25:37,336 | INFO     | job 6848019393 has completed (purged errors)
[2025-10-19 09:26:47] 2025-10-19 07:25:37,336 | INFO     | overall cleanup function is called
[2025-10-19 09:26:47] 2025-10-19 07:25:38,345 | INFO     | --- collectZombieJob: --- 10, [8755]
[2025-10-19 09:26:47] 2025-10-19 07:25:38,346 | INFO     | zombie collector waiting for pid 8755
[2025-10-19 09:26:47] 2025-10-19 07:25:38,346 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-19 09:26:47] 2025-10-19 07:25:38,346 | INFO     | collected zombie processes
[2025-10-19 09:26:47] 2025-10-19 07:25:38,346 | INFO     | will attempt to kill all subprocesses of pid=8755
[2025-10-19 09:26:47] 2025-10-19 07:25:38,491 | INFO     | process IDs to be killed: [8755] (in reverse order)
[2025-10-19 09:26:47] 2025-10-19 07:25:39,348 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 09:26:47] 2025-10-19 07:25:39,348 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 09:26:47] 2025-10-19 07:25:39,351 | INFO     | did not find any defunct processes belonging to 8755
[2025-10-19 09:26:47] 2025-10-19 07:25:39,355 | INFO     | did not find any defunct processes belonging to 8755
[2025-10-19 09:26:47] 2025-10-19 07:25:39,355 | INFO     | ready for new job
[2025-10-19 09:26:47] 2025-10-19 07:25:39,355 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 09:26:47] 2025-10-19 07:25:39,358 | INFO     | ***************************************
[2025-10-19 09:26:47] 2025-10-19 07:25:39,358 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 09:26:47] 2025-10-19 07:25:39,358 | INFO     | ***************************************
[2025-10-19 09:26:47] 2025-10-19 07:25:39,358 | INFO     | 
[2025-10-19 09:26:47] 2025-10-19 07:25:39,359 | INFO     | pilot is running in a VM
[2025-10-19 09:26:47] 2025-10-19 07:25:39,359 | INFO     | architecture information:
[2025-10-19 09:26:47] 2025-10-19 07:25:39,370 | INFO     | executing command: cat /etc/os-release
[2025-10-19 09:26:47] 2025-10-19 07:25:39,589 | INFO     | cat /etc/os-release:
[2025-10-19 09:26:47] NAME="CentOS Linux"
[2025-10-19 09:26:47] VERSION="7 (Core)"
[2025-10-19 09:26:47] ID="centos"
[2025-10-19 09:26:47] ID_LIKE="rhel fedora"
[2025-10-19 09:26:47] VERSION_ID="7"
[2025-10-19 09:26:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 09:26:47] ANSI_COLOR="0;31"
[2025-10-19 09:26:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 09:26:47] HOME_URL="https://www.centos.org/"
[2025-10-19 09:26:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 09:26:47] 
[2025-10-19 09:26:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 09:26:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 09:26:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 09:26:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 09:26:47] 
[2025-10-19 09:26:47] 2025-10-19 07:25:39,589 | INFO     | ***************************************
[2025-10-19 09:26:47] 2025-10-19 07:25:40,093 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-10-19 09:26:47] 2025-10-19 07:25:40,610 | INFO     | sufficient remaining disk space (495354642432 B)
[2025-10-19 09:26:47] 2025-10-19 07:25:40,611 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 09:26:47] 2025-10-19 07:25:40,611 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 09:26:47] 2025-10-19 07:25:40,611 | INFO     | update_server=False
[2025-10-19 09:26:47] 2025-10-19 07:25:40,611 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 09:26:47] 2025-10-19 07:25:40,809 | INFO     | all job control threads have been joined
[2025-10-19 09:26:47] 2025-10-19 07:25:40,942 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 09:26:47] 2025-10-19 07:25:40,943 | INFO     | aborting loop
[2025-10-19 09:26:47] 2025-10-19 07:25:41,314 | INFO     | all payload control threads have been joined
[2025-10-19 09:26:47] 2025-10-19 07:25:41,334 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 09:26:47] 2025-10-19 07:25:41,447 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 09:26:47] 2025-10-19 07:25:41,611 | INFO     | all data control threads have been joined
[2025-10-19 09:26:47] 2025-10-19 07:25:41,617 | INFO     | [job] retrieve thread has finished
[2025-10-19 09:26:47] 2025-10-19 07:25:41,710 | INFO     | [payload] failed_post thread has finished
[2025-10-19 09:26:47] 2025-10-19 07:25:41,794 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 09:26:47] 2025-10-19 07:25:41,816 | INFO     | [payload] validate_post thread has finished
[2025-10-19 09:26:47] 2025-10-19 07:25:41,816 | INFO     | [job] control thread has finished
[2025-10-19 09:26:47] 2025-10-19 07:25:41,949 | INFO     | [job] job monitor thread has finished
[2025-10-19 09:26:47] 2025-10-19 07:25:42,010 | INFO     | [job] validate thread has finished
[2025-10-19 09:26:47] 2025-10-19 07:25:42,082 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 09:26:47] 2025-10-19 07:25:42,087 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 09:26:47] 2025-10-19 07:25:42,320 | INFO     | [payload] control thread has finished
[2025-10-19 09:26:47] 2025-10-19 07:25:42,469 | INFO     | [data] copytool_in thread has finished
[2025-10-19 09:26:47] 2025-10-19 07:25:42,618 | INFO     | [data] control thread has finished
[2025-10-19 09:26:47] 2025-10-19 07:25:42,689 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 09:26:47] 2025-10-19 07:25:42,736 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 09:26:47] 2025-10-19 07:25:42,801 | INFO     | [job] queue monitor thread has finished
[2025-10-19 09:26:47] 2025-10-19 07:25:43,342 | INFO     | [data] copytool_out thread has finished
[2025-10-19 09:26:47] 2025-10-19 07:25:45,459 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 09:26:47] 2025-10-19 07:26:09,315 | INFO     | PID=2124 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-19 09:26:47] 2025-10-19 07:26:09,315 | INFO     | .. there are 9 such processes running
[2025-10-19 09:26:47] 2025-10-19 07:26:09,315 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 09:26:47] 2025-10-19 07:26:09,315 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 09:26:47] 2025-10-19 07:26:09,316 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 09:26:47] 2025-10-19 07:26:35,464 | INFO     | [monitor] cgroup control has ended
[2025-10-19 09:26:47] 2025-10-19 07:26:36,862 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139738515019584)>', '<ExcThread(monitor, started 139738086364928)>']
[2025-10-19 09:26:47] 2025-10-19 07:26:37,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 09:26:47] 2025-10-19 07:26:37,482 | INFO     | [monitor] control thread has ended
[2025-10-19 09:26:47] 2025-10-19 07:26:41,886 | INFO     | all workflow threads have been joined
[2025-10-19 09:26:47] 2025-10-19 07:26:41,887 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 09:26:47] 2025-10-19 07:26:41,887 | INFO     | traces error code: 0
[2025-10-19 09:26:47] 2025-10-19 07:26:41,887 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 09:26:47] 2025-10-19 07:26:42,285 [wrapper] ==== pilot stdout END ====
[2025-10-19 09:26:47] 2025-10-19 07:26:42,346 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 09:26:47] 2025-10-19 07:26:42,400 [wrapper] pilotpid: 2124
[2025-10-19 09:26:47] 2025-10-19 07:26:42,467 [wrapper] Pilot exit status: 0
[2025-10-19 09:26:47] 2025-10-19 07:26:42,928 [wrapper] pandaids: 6848019393
[2025-10-19 09:26:47] 2025-10-19 07:26:44,175 [wrapper] cleanup supervisor_pilot  9004 2125
[2025-10-19 09:26:47] 2025-10-19 07:26:44,324 [wrapper] Test setup, not cleaning
[2025-10-19 09:26:47] 2025-10-19 07:26:44,425 [wrapper] apfmon messages muted
[2025-10-19 09:26:47] 2025-10-19 07:26:44,507 [wrapper] ==== wrapper stdout END ====
[2025-10-19 09:26:47] 2025-10-19 07:26:44,602 [wrapper] ==== wrapper stderr END ====
[2025-10-19 09:26:47]  *** Error codes and diagnostics ***
[2025-10-19 09:26:47]     "exeErrorCode": 0,
[2025-10-19 09:26:47]     "exeErrorDiag": "",
[2025-10-19 09:26:47]     "pilotErrorCode": 0,
[2025-10-19 09:26:47]     "pilotErrorDiag": "",
[2025-10-19 09:26:47]  *** Listing of results directory ***
[2025-10-19 09:26:47] total 431680
[2025-10-19 09:26:47] -rw-r--r--. 1 boinc boinc    557409 Oct 18 04:18 pilot3.tar.gz
[2025-10-19 09:26:47] -rwx------. 1 boinc boinc     36292 Oct 18 04:41 runpilot2-wrapper.sh
[2025-10-19 09:26:47] -rw-r--r--. 1 boinc boinc      5112 Oct 18 04:41 queuedata.json
[2025-10-19 09:26:47] -rw-r--r--. 1 boinc boinc       100 Oct 19 04:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 09:26:47] -rwxr-xr-x. 1 boinc boinc      7986 Oct 19 04:57 run_atlas
[2025-10-19 09:26:47] -rw-r--r--. 1 boinc boinc       105 Oct 19 04:57 job.xml
[2025-10-19 09:26:47] -rw-r--r--. 1 boinc boinc      6390 Oct 19 04:57 init_data.xml
[2025-10-19 09:26:47] -rw-r--r--. 2 boinc boinc 226998302 Oct 19 04:57 EVNT.46771634._000445.pool.root.1
[2025-10-19 09:26:47] -rw-r--r--. 2 boinc boinc     15120 Oct 19 04:57 start_atlas.sh
[2025-10-19 09:26:47] drwxrwx--x. 2 boinc boinc        68 Oct 19 04:57 shared
[2025-10-19 09:26:47] -rw-r--r--. 2 boinc boinc    569670 Oct 19 04:57 input.tar.gz
[2025-10-19 09:26:47] -rw-r--r--. 1 boinc boinc         0 Oct 19 04:57 boinc_lockfile
[2025-10-19 09:26:47] -rw-r--r--. 1 boinc boinc      2557 Oct 19 04:57 pandaJob.out
[2025-10-19 09:26:47] -rw-------. 1 boinc boinc    976742 Oct 19 05:01 agis_schedconf.cvmfs.json
[2025-10-19 09:26:47] drwx------. 5 boinc boinc      4096 Oct 19 05:01 pilot3
[2025-10-19 09:26:47] -rw-------. 1 boinc boinc 205960438 Oct 19 09:22 HITS.46771637._036200.pool.root.1
[2025-10-19 09:26:47] -rw-r--r--. 1 boinc boinc       531 Oct 19 09:23 boinc_task_state.xml
[2025-10-19 09:26:47] -rw-------. 1 boinc boinc      1019 Oct 19 09:23 memory_monitor_summary.json
[2025-10-19 09:26:47] -rw-------. 1 boinc boinc   1560740 Oct 19 09:23 agis_ddmendpoints.agis.ALL.json
[2025-10-19 09:26:47] -rw-------. 1 boinc boinc    479337 Oct 19 09:23 log.46771637._036200.job.log.tgz.1
[2025-10-19 09:26:47] -rw-------. 1 boinc boinc        95 Oct 19 09:25 pilot_heartbeat.json
[2025-10-19 09:26:47] -rw-------. 1 boinc boinc      7783 Oct 19 09:25 heartbeat.json
[2025-10-19 09:26:47] -rw-r--r--. 1 boinc boinc      8192 Oct 19 09:26 boinc_mmap_file
[2025-10-19 09:26:47] -rw-r--r--. 1 boinc boinc        28 Oct 19 09:26 wrapper_checkpoint.txt
[2025-10-19 09:26:47] -rw-------. 1 boinc boinc      4883 Oct 19 09:26 pilotlog.txt
[2025-10-19 09:26:47] -rw-------. 1 boinc boinc   2116575 Oct 19 09:26 log.46771637._036200.job.log.1
[2025-10-19 09:26:47] -rw-------. 1 boinc boinc       357 Oct 19 09:26 output.list
[2025-10-19 09:26:47] -rw-r--r--. 1 boinc boinc       620 Oct 19 09:26 runtime_log
[2025-10-19 09:26:47] -rw-------. 1 boinc boinc   2611200 Oct 19 09:26 result.tar.gz
[2025-10-19 09:26:47] -rw-r--r--. 1 boinc boinc      8703 Oct 19 09:26 runtime_log.err
[2025-10-19 09:26:47] -rw-------. 1 boinc boinc       657 Oct 19 09:26 dJGODmz3BU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHrvNDmpHZfVo.diag
[2025-10-19 09:26:47] -rw-r--r--. 1 boinc boinc     20786 Oct 19 09:26 stderr.txt
[2025-10-19 09:26:47] HITS file was successfully produced:
[2025-10-19 09:26:47] -rw-------. 1 boinc boinc 205960438 Oct 19 09:22 shared/HITS.pool.root.1
[2025-10-19 09:26:47]  *** Contents of shared directory: ***
[2025-10-19 09:26:47] total 425944
[2025-10-19 09:26:47] -rw-r--r--. 2 boinc boinc 226998302 Oct 19 04:57 ATLAS.root_0
[2025-10-19 09:26:47] -rw-r--r--. 2 boinc boinc     15120 Oct 19 04:57 start_atlas.sh
[2025-10-19 09:26:47] -rw-r--r--. 2 boinc boinc    569670 Oct 19 04:57 input.tar.gz
[2025-10-19 09:26:47] -rw-------. 1 boinc boinc 205960438 Oct 19 09:22 HITS.pool.root.1
[2025-10-19 09:26:47] -rw-------. 1 boinc boinc   2611200 Oct 19 09:26 result.tar.gz
09:26:49 (30756): run_atlas exited; CPU time 57228.644000
09:26:49 (30756): called boinc_finish(0)

</stderr_txt>
]]>

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