Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:11:40 (15078): wrapper (7.7.26015): starting
12:11:40 (15078): wrapper: running run_atlas (--nthreads 12)
[2025-10-18 12:11:40] Arguments: --nthreads 12
[2025-10-18 12:11:40] Threads: 12
[2025-10-18 12:11:40] Checking for CVMFS
[2025-10-18 12:11:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 12:11:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 12:11:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 12:11:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 12:11:41] 2.11.2.0 2991 231699 97296 151857 3 57 18836519 20275201 1 130560 1 115192882 99.984 13765841 12680 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 12:11:41] CVMFS is ok
[2025-10-18 12:11:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 12:11:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 12:11:41] Further information can be found at the LHC@home message board.
[2025-10-18 12:11:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 12:11:41] Checking for apptainer binary...
[2025-10-18 12:11:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 12:11:41] Running /usr/bin/apptainer --version
[2025-10-18 12:11:41] apptainer version 1.3.2-1.el7
[2025-10-18 12:11:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 12:11:42] c-205-32.aglt2.org
[2025-10-18 12:11:42] apptainer works
[2025-10-18 12:11:42] Set ATHENA_PROC_NUMBER=12
[2025-10-18 12:11:42] Set ATHENA_CORE_NUMBER=12
[2025-10-18 12:11:42] Starting ATLAS job with PandaID=6848034825
[2025-10-18 12:11:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 13:33:29]  *** The last 200 lines of the pilot log: ***
[2025-10-18 13:33:29]  protocol_id=None
[2025-10-18 13:33:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-18 13:33:29]  replicas=None
[2025-10-18 13:33:29]  scope=mc23_13p6TeV
[2025-10-18 13:33:29]  status=None
[2025-10-18 13:33:29]  status_code=0
[2025-10-18 13:33:29]  storage_token=
[2025-10-18 13:33:29]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6848034825/log.46771637._042523.job.log.tgz.1
[2025-10-18 13:33:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/c1/log.46771637._042523.job.log.tgz.1
[2025-10-18 13:33:29]  workdir=None
[2025-10-18 13:33:29] ]
[2025-10-18 13:33:29] 2025-10-18 17:32:52,046 | INFO     | transferring file log.46771637._042523.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6848034825/log.46771637._042523.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-18 13:33:29] 2025-10-18 17:32:52,046 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6848034825/log.46771637._042523.job.log.tgz.1 /tmp/boinchome/slots/0/log.46771637._042523.job
[2025-10-18 13:33:29] 2025-10-18 17:32:52,069 | INFO     | adding to output.list: log.46771637._042523.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/c1/log.46771637._042523.job.log.tg
[2025-10-18 13:33:29] 2025-10-18 17:32:52,069 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 13:33:29] 2025-10-18 17:32:52,070 | INFO     | summary of transferred files:
[2025-10-18 13:33:29] 2025-10-18 17:32:52,070 | INFO     |  -- lfn=log.46771637._042523.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 13:33:29] 2025-10-18 17:32:52,070 | INFO     | stage-out finished correctly
[2025-10-18 13:33:29] 2025-10-18 17:32:52,135 | INFO     | time since job start (4855s) is within the limit (172800.0s)
[2025-10-18 13:33:29] 2025-10-18 17:32:52,156 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 13:33:29] 2025-10-18 17:32:52,458 | INFO     | job 6848034825 has state=finished
[2025-10-18 13:33:29] 2025-10-18 17:32:52,458 | INFO     | preparing for final server update for job 6848034825 in state='finished'
[2025-10-18 13:33:29] 2025-10-18 17:32:52,522 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-18 13:33:29] 2025-10-18 17:32:52,523 | INFO     | this job has now completed (state=finished)
[2025-10-18 13:33:29] 2025-10-18 17:32:52,523 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 13:33:29] 2025-10-18 17:32:52,523 | INFO     | log transfer has been attempted: DONE
[2025-10-18 13:33:29] 2025-10-18 17:32:52,523 | INFO     | job 6848034825 has finished - writing final server update
[2025-10-18 13:33:29] 2025-10-18 17:32:52,523 | INFO     | total number of processed events: 400 (read)
[2025-10-18 13:33:29] 2025-10-18 17:32:52,524 | INFO     | executing command: lscpu
[2025-10-18 13:33:29] 2025-10-18 17:32:52,551 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 13:33:29] 2025-10-18 17:32:54,146 | INFO     | time since job start (4857s) is within the limit (172800.0s)
[2025-10-18 13:33:29] 2025-10-18 17:32:56,151 | INFO     | time since job start (4859s) is within the limit (172800.0s)
[2025-10-18 13:33:29] 2025-10-18 17:32:56,689 | WARNING  | process 25191 can no longer be monitored (due to stat problems) - aborting
[2025-10-18 13:33:29] 2025-10-18 17:32:56,689 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6848034825/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 13:33:29] 2025-10-18 17:32:56,841 | INFO     | number of running child processes to parent process 25191: 1
[2025-10-18 13:33:29] 2025-10-18 17:32:56,842 | INFO     | maximum number of monitored processes: 6
[2025-10-18 13:33:29] 2025-10-18 17:32:57,544 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-18 13:33:29] 2025-10-18 17:32:57,547 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-18 13:33:29] 2025-10-18 17:32:57,549 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6848034825/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 13:33:29] 2025-10-18 17:32:57,550 | INFO     | extracted standard info from prmon json
[2025-10-18 13:33:29] 2025-10-18 17:32:57,550 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 13:33:29] 2025-10-18 17:32:57,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 13:33:29] 2025-10-18 17:32:57,551 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 13:33:29] 2025-10-18 17:32:57,551 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 13:33:29] 2025-10-18 17:32:57,554 | INFO     | fitting pss+swap vs Time
[2025-10-18 13:33:29] 2025-10-18 17:32:57,554 | INFO     | sum of square deviations: 120605052.0
[2025-10-18 13:33:29] 2025-10-18 17:32:57,554 | INFO     | sum of deviations: 1510654752.0
[2025-10-18 13:33:29] 2025-10-18 17:32:57,555 | INFO     | mean x: 1760806446.0
[2025-10-18 13:33:29] 2025-10-18 17:32:57,555 | INFO     | mean y: 2709423.191780822
[2025-10-18 13:33:29] 2025-10-18 17:32:57,555 | INFO     | -- intersect: -22052507840.858913
[2025-10-18 13:33:29] 2025-10-18 17:32:57,555 | INFO     | intersect: -22052507840.858913
[2025-10-18 13:33:29] 2025-10-18 17:32:57,555 | INFO     | chi2: 0.014265610210693497
[2025-10-18 13:33:29] 2025-10-18 17:32:57,556 | INFO     | -- intersect: -22052507840.858913
[2025-10-18 13:33:29] 2025-10-18 17:32:57,556 | INFO     | current memory leak: 12.53 B/s (using 73 data points, chi2=0.01)
[2025-10-18 13:33:29] 2025-10-18 17:32:57,556 | INFO     | could have reported an average CPU frequency of 2030 MHz (6 samples)
[2025-10-18 13:33:29] 2025-10-18 17:32:57,557 | INFO     | ..............................
[2025-10-18 13:33:29] 2025-10-18 17:32:57,557 | INFO     | . Timing measurements:
[2025-10-18 13:33:29] 2025-10-18 17:32:57,557 | INFO     | . get job = 0 s
[2025-10-18 13:33:29] 2025-10-18 17:32:57,557 | INFO     | . initial setup = 2 s
[2025-10-18 13:33:29] 2025-10-18 17:32:57,557 | INFO     | . payload setup = 6 s
[2025-10-18 13:33:29] 2025-10-18 17:32:57,557 | INFO     | . stage-in = 0 s
[2025-10-18 13:33:29] 2025-10-18 17:32:57,557 | INFO     | . payload execution = 4827 s
[2025-10-18 13:33:29] 2025-10-18 17:32:57,558 | INFO     | . stage-out = 0 s
[2025-10-18 13:33:29] 2025-10-18 17:32:57,558 | INFO     | . log creation = 0 s
[2025-10-18 13:33:29] 2025-10-18 17:32:57,558 | INFO     | ..............................
[2025-10-18 13:33:29] 2025-10-18 17:32:57,645 | INFO     | 
[2025-10-18 13:33:29] 2025-10-18 17:32:57,645 | INFO     | job summary report
[2025-10-18 13:33:29] 2025-10-18 17:32:57,645 | INFO     | --------------------------------------------------
[2025-10-18 13:33:29] 2025-10-18 17:32:57,645 | INFO     | PanDA job id: 6848034825
[2025-10-18 13:33:29] 2025-10-18 17:32:57,646 | INFO     | task id: 46771637
[2025-10-18 13:33:29] 2025-10-18 17:32:57,646 | INFO     | errors: (none)
[2025-10-18 13:33:29] 2025-10-18 17:32:57,646 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 13:33:29] 2025-10-18 17:32:57,646 | INFO     | pilot state: finished 
[2025-10-18 13:33:29] 2025-10-18 17:32:57,646 | INFO     | transexitcode: 0
[2025-10-18 13:33:29] 2025-10-18 17:32:57,646 | INFO     | exeerrorcode: 0
[2025-10-18 13:33:29] 2025-10-18 17:32:57,647 | INFO     | exeerrordiag: 
[2025-10-18 13:33:29] 2025-10-18 17:32:57,647 | INFO     | exitcode: 0
[2025-10-18 13:33:29] 2025-10-18 17:32:57,647 | INFO     | exitmsg: OK
[2025-10-18 13:33:29] 2025-10-18 17:32:57,647 | INFO     | cpuconsumptiontime: 50960 s
[2025-10-18 13:33:29] 2025-10-18 17:32:57,647 | INFO     | nevents: 400
[2025-10-18 13:33:29] 2025-10-18 17:32:57,647 | INFO     | neventsw: 0
[2025-10-18 13:33:29] 2025-10-18 17:32:57,647 | INFO     | pid: 25191
[2025-10-18 13:33:29] 2025-10-18 17:32:57,647 | INFO     | pgrp: 25191
[2025-10-18 13:33:29] 2025-10-18 17:32:57,648 | INFO     | corecount: 12
[2025-10-18 13:33:29] 2025-10-18 17:32:57,648 | INFO     | event service: False
[2025-10-18 13:33:29] 2025-10-18 17:32:57,648 | INFO     | sizes: {0: 2348702, 1: 2348957, 6: 2349219, 12: 2349247, 4838: 2375492, 4839: 2384674, 4845: 2384812}
[2025-10-18 13:33:29] 2025-10-18 17:32:57,648 | INFO     | --------------------------------------------------
[2025-10-18 13:33:29] 2025-10-18 17:32:57,648 | INFO     | 
[2025-10-18 13:33:29] 2025-10-18 17:32:57,648 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 13:33:29] 2025-10-18 17:32:57,673 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,673 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,673 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,674 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,674 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,674 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,674 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,674 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,674 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,675 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,675 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,675 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,675 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,676 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 13:33:29] 2025-10-18 17:32:57,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,676 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 13:33:29] 2025-10-18 17:32:57,677 | INFO     | job 6848034825 has completed (purged errors)
[2025-10-18 13:33:29] 2025-10-18 17:32:57,677 | INFO     | overall cleanup function is called
[2025-10-18 13:33:29] 2025-10-18 17:32:58,684 | INFO     | --- collectZombieJob: --- 10, [25191]
[2025-10-18 13:33:29] 2025-10-18 17:32:58,684 | INFO     | zombie collector waiting for pid 25191
[2025-10-18 13:33:29] 2025-10-18 17:32:58,684 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 13:33:29] 2025-10-18 17:32:58,684 | INFO     | collected zombie processes
[2025-10-18 13:33:29] 2025-10-18 17:32:58,685 | INFO     | will attempt to kill all subprocesses of pid=25191
[2025-10-18 13:33:29] 2025-10-18 17:32:58,773 | INFO     | process IDs to be killed: [25191] (in reverse order)
[2025-10-18 13:33:29] 2025-10-18 17:32:58,822 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 13:33:29] 2025-10-18 17:32:58,823 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 13:33:29] 2025-10-18 17:32:58,827 | INFO     | did not find any defunct processes belonging to 25191
[2025-10-18 13:33:29] 2025-10-18 17:32:58,829 | INFO     | did not find any defunct processes belonging to 25191
[2025-10-18 13:33:29] 2025-10-18 17:32:58,829 | INFO     | ready for new job
[2025-10-18 13:33:29] 2025-10-18 17:32:58,830 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 13:33:29] 2025-10-18 17:32:58,831 | INFO     | ***************************************
[2025-10-18 13:33:29] 2025-10-18 17:32:58,831 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 13:33:29] 2025-10-18 17:32:58,831 | INFO     | ***************************************
[2025-10-18 13:33:29] 2025-10-18 17:32:58,831 | INFO     | 
[2025-10-18 13:33:29] 2025-10-18 17:32:58,831 | INFO     | architecture information:
[2025-10-18 13:33:29] 2025-10-18 17:32:58,832 | INFO     | executing command: cat /etc/os-release
[2025-10-18 13:33:29] 2025-10-18 17:32:58,847 | INFO     | cat /etc/os-release:
[2025-10-18 13:33:29] NAME="CentOS Linux"
[2025-10-18 13:33:29] VERSION="7 (Core)"
[2025-10-18 13:33:29] ID="centos"
[2025-10-18 13:33:29] ID_LIKE="rhel fedora"
[2025-10-18 13:33:29] VERSION_ID="7"
[2025-10-18 13:33:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 13:33:29] ANSI_COLOR="0;31"
[2025-10-18 13:33:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 13:33:29] HOME_URL="https://www.centos.org/"
[2025-10-18 13:33:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 13:33:29] 
[2025-10-18 13:33:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 13:33:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 13:33:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 13:33:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 13:33:29] 
[2025-10-18 13:33:29] 2025-10-18 17:32:58,847 | INFO     | ***************************************
[2025-10-18 13:33:29] 2025-10-18 17:32:59,350 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 13:33:29] 2025-10-18 17:32:59,366 | INFO     | sufficient remaining disk space (29330767872 B)
[2025-10-18 13:33:29] 2025-10-18 17:32:59,367 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 13:33:29] 2025-10-18 17:32:59,367 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 13:33:29] 2025-10-18 17:32:59,367 | INFO     | update_server=False
[2025-10-18 13:33:29] 2025-10-18 17:32:59,367 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 13:33:29] 2025-10-18 17:32:59,368 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 13:33:29] 2025-10-18 17:32:59,430 | INFO     | all job control threads have been joined
[2025-10-18 13:33:29] 2025-10-18 17:32:59,939 | INFO     | all data control threads have been joined
[2025-10-18 13:33:29] 2025-10-18 17:33:00,167 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 13:33:29] 2025-10-18 17:33:00,350 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 13:33:29] 2025-10-18 17:33:00,350 | INFO     | aborting loop
[2025-10-18 13:33:29] 2025-10-18 17:33:00,373 | INFO     | [job] retrieve thread has finished
[2025-10-18 13:33:29] 2025-10-18 17:33:00,373 | INFO     | [job] queue monitor thread has finished
[2025-10-18 13:33:29] 2025-10-18 17:33:00,436 | INFO     | [job] control thread has finished
[2025-10-18 13:33:29] 2025-10-18 17:33:00,762 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 13:33:29] 2025-10-18 17:33:00,784 | INFO     | all payload control threads have been joined
[2025-10-18 13:33:29] 2025-10-18 17:33:00,940 | INFO     | [data] control thread has finished
[2025-10-18 13:33:29] 2025-10-18 17:33:01,105 | INFO     | [payload] failed_post thread has finished
[2025-10-18 13:33:29] 2025-10-18 17:33:01,205 | INFO     | [job] validate thread has finished
[2025-10-18 13:33:29] 2025-10-18 17:33:01,356 | INFO     | [job] job monitor thread has finished
[2025-10-18 13:33:29] 2025-10-18 17:33:01,657 | INFO     | [payload] validate_post thread has finished
[2025-10-18 13:33:29] 2025-10-18 17:33:01,708 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 13:33:29] 2025-10-18 17:33:01,711 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 13:33:29] 2025-10-18 17:33:01,790 | INFO     | [payload] control thread has finished
[2025-10-18 13:33:29] 2025-10-18 17:33:01,821 | INFO     | [data] copytool_in thread has finished
[2025-10-18 13:33:29] 2025-10-18 17:33:02,172 | INFO     | [data] copytool_out thread has finished
[2025-10-18 13:33:29] 2025-10-18 17:33:02,743 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 13:33:29] 2025-10-18 17:33:04,316 | INFO     | [monitor] cgroup control has ended
[2025-10-18 13:33:29] 2025-10-18 17:33:06,749 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 13:33:29] 2025-10-18 17:33:09,758 | INFO     | job.realtimelogging is not enabled
[2025-10-18 13:33:29] 2025-10-18 17:33:10,763 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 13:33:29] 2025-10-18 17:33:11,876 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139749752260416)>', '<ExcThread(monitor, started 139749016717056)>']
[2025-10-18 13:33:29] 2025-10-18 17:33:16,902 | INFO     | all workflow threads have been joined
[2025-10-18 13:33:29] 2025-10-18 17:33:16,902 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 13:33:29] 2025-10-18 17:33:16,902 | INFO     | traces error code: 0
[2025-10-18 13:33:29] 2025-10-18 17:33:16,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 13:33:29] 2025-10-18 17:33:29,350 | INFO     | PID=18751 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 13:33:29] 2025-10-18 17:33:29,350 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 13:33:29] 2025-10-18 17:33:29,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 13:33:29] 2025-10-18 17:33:29,351 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 13:33:29] 2025-10-18 17:33:29,351 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 13:33:29] 2025-10-18 17:33:29,351 | INFO     | [monitor] control thread has ended
[2025-10-18 13:33:29] 2025-10-18 17:33:29,437 [wrapper] ==== pilot stdout END ====
[2025-10-18 13:33:29] 2025-10-18 17:33:29,441 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 13:33:29] 2025-10-18 17:33:29,445 [wrapper] pilotpid: 18751
[2025-10-18 13:33:29] 2025-10-18 17:33:29,449 [wrapper] Pilot exit status: 0
[2025-10-18 13:33:29] 2025-10-18 17:33:29,464 [wrapper] pandaids: 6848034825
[2025-10-18 13:33:29] 2025-10-18 17:33:29,503 [wrapper] cleanup supervisor_pilot  6518 18752
[2025-10-18 13:33:29] 2025-10-18 17:33:29,507 [wrapper] Test setup, not cleaning
[2025-10-18 13:33:29] 2025-10-18 17:33:29,511 [wrapper] apfmon messages muted
[2025-10-18 13:33:29] 2025-10-18 17:33:29,515 [wrapper] ==== wrapper stdout END ====
[2025-10-18 13:33:29] 2025-10-18 17:33:29,518 [wrapper] ==== wrapper stderr END ====
[2025-10-18 13:33:29]  *** Error codes and diagnostics ***
[2025-10-18 13:33:29]     "exeErrorCode": 0,
[2025-10-18 13:33:29]     "exeErrorDiag": "",
[2025-10-18 13:33:29]     "pilotErrorCode": 0,
[2025-10-18 13:33:29]     "pilotErrorDiag": "",
[2025-10-18 13:33:29]  *** Listing of results directory ***
[2025-10-18 13:33:29] total 433820
[2025-10-18 13:33:29] -rw-r--r-- 1 boincer umatlas    557409 Oct 18 07:34 pilot3.tar.gz
[2025-10-18 13:33:29] -rwx------ 1 boincer umatlas     36292 Oct 18 07:36 runpilot2-wrapper.sh
[2025-10-18 13:33:29] -rw-r--r-- 1 boincer umatlas      5112 Oct 18 07:36 queuedata.json
[2025-10-18 13:33:29] -rw-r--r-- 1 boincer umatlas       100 Oct 18 12:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 13:33:29] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 12:11 run_atlas
[2025-10-18 13:33:29] -rw-r--r-- 1 boincer umatlas       105 Oct 18 12:11 job.xml
[2025-10-18 13:33:29] -rw-r--r-- 2 boincer umatlas 229070925 Oct 18 12:11 EVNT.46771634._001799.pool.root.1
[2025-10-18 13:33:29] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 12:11 start_atlas.sh
[2025-10-18 13:33:29] drwxrwx--x 2 boincer umatlas      4096 Oct 18 12:11 shared
[2025-10-18 13:33:29] -rw-r--r-- 2 boincer umatlas    569673 Oct 18 12:11 input.tar.gz
[2025-10-18 13:33:29] -rw-r--r-- 1 boincer umatlas         0 Oct 18 12:11 boinc_lockfile
[2025-10-18 13:33:29] -rw-r--r-- 1 boincer umatlas      2558 Oct 18 12:11 pandaJob.out
[2025-10-18 13:33:29] -rw------- 1 boincer umatlas    976750 Oct 18 12:11 agis_schedconf.cvmfs.json
[2025-10-18 13:33:29] -rw------- 1 boincer umatlas   1560740 Oct 18 12:11 agis_ddmendpoints.agis.ALL.json
[2025-10-18 13:33:29] drwx------ 5 boincer umatlas      4096 Oct 18 12:11 pilot3
[2025-10-18 13:33:29] -rw-r--r-- 1 boincer umatlas      5953 Oct 18 13:27 init_data.xml
[2025-10-18 13:33:29] -rw------- 1 boincer umatlas 209090952 Oct 18 13:32 HITS.46771637._042523.pool.root.1
[2025-10-18 13:33:29] -rw-r--r-- 1 boincer umatlas       529 Oct 18 13:32 boinc_task_state.xml
[2025-10-18 13:33:29] -rw------- 1 boincer umatlas      1051 Oct 18 13:32 memory_monitor_summary.json
[2025-10-18 13:33:29] -rw------- 1 boincer umatlas    382858 Oct 18 13:32 log.46771637._042523.job.log.tgz.1
[2025-10-18 13:33:29] -rw------- 1 boincer umatlas      7854 Oct 18 13:32 heartbeat.json
[2025-10-18 13:33:29] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 13:33 boinc_mmap_file
[2025-10-18 13:33:29] -rw-r--r-- 1 boincer umatlas        27 Oct 18 13:33 wrapper_checkpoint.txt
[2025-10-18 13:33:29] -rw------- 1 boincer umatlas        95 Oct 18 13:33 pilot_heartbeat.json
[2025-10-18 13:33:29] -rw------- 1 boincer umatlas       745 Oct 18 13:33 pilotlog.txt
[2025-10-18 13:33:29] -rw------- 1 boincer umatlas    701131 Oct 18 13:33 log.46771637._042523.job.log.1
[2025-10-18 13:33:29] -rw------- 1 boincer umatlas       357 Oct 18 13:33 output.list
[2025-10-18 13:33:29] -rw-r--r-- 1 boincer umatlas       620 Oct 18 13:33 runtime_log
[2025-10-18 13:33:29] -rw------- 1 boincer umatlas   1105920 Oct 18 13:33 result.tar.gz
[2025-10-18 13:33:29] -rw------- 1 boincer umatlas       659 Oct 18 13:33 yeoMDmePKU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm92wNDmt3Wiun.diag
[2025-10-18 13:33:29] -rw-r--r-- 1 boincer umatlas      8705 Oct 18 13:33 runtime_log.err
[2025-10-18 13:33:29] -rw-r--r-- 1 boincer umatlas     21742 Oct 18 13:33 stderr.txt
[2025-10-18 13:33:29] HITS file was successfully produced:
[2025-10-18 13:33:29] -rw------- 1 boincer umatlas 209090952 Oct 18 13:32 shared/HITS.pool.root.1
[2025-10-18 13:33:29]  *** Contents of shared directory: ***
[2025-10-18 13:33:29] total 429556
[2025-10-18 13:33:29] -rw-r--r-- 2 boincer umatlas 229070925 Oct 18 12:11 ATLAS.root_0
[2025-10-18 13:33:29] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 12:11 start_atlas.sh
[2025-10-18 13:33:29] -rw-r--r-- 2 boincer umatlas    569673 Oct 18 12:11 input.tar.gz
[2025-10-18 13:33:29] -rw------- 1 boincer umatlas 209090952 Oct 18 13:32 HITS.pool.root.1
[2025-10-18 13:33:29] -rw------- 1 boincer umatlas   1105920 Oct 18 13:33 result.tar.gz
13:33:31 (15078): run_atlas exited; CPU time 50940.145997
13:33:31 (15078): called boinc_finish(0)

</stderr_txt>
]]>

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