Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:53:00 (2024): wrapper (7.7.26015): starting
11:53:00 (2024): wrapper: running run_atlas (--nthreads 12)
[2025-10-18 11:53:00] Arguments: --nthreads 12
[2025-10-18 11:53:00] Threads: 12
[2025-10-18 11:53:00] Checking for CVMFS
[2025-10-18 11:53:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 11:53:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 11:53:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 11:53:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 11:53:00] 2.11.2.0 2924 231680 102272 151857 1 57 19645889 20275200 1 130560 4 115776665 99.984 14103156 13161 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 11:53:00] CVMFS is ok
[2025-10-18 11:53:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 11:53:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 11:53:00] Further information can be found at the LHC@home message board.
[2025-10-18 11:53:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 11:53:00] Checking for apptainer binary...
[2025-10-18 11:53:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 11:53:00] Running /usr/bin/apptainer --version
[2025-10-18 11:53:00] apptainer version 1.3.2-1.el7
[2025-10-18 11:53:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 11:53:01] c-205-28.aglt2.org
[2025-10-18 11:53:01] apptainer works
[2025-10-18 11:53:01] Set ATHENA_PROC_NUMBER=12
[2025-10-18 11:53:01] Set ATHENA_CORE_NUMBER=12
[2025-10-18 11:53:01] Starting ATLAS job with PandaID=6837401954
[2025-10-18 11:53:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 13:05:43]  *** The last 200 lines of the pilot log: ***
[2025-10-18 13:05:43]  mtime=0
[2025-10-18 13:05:43]  protocol_id=None
[2025-10-18 13:05:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-18 13:05:43]  replicas=None
[2025-10-18 13:05:43]  scope=mc23_13p6TeV
[2025-10-18 13:05:43]  status=None
[2025-10-18 13:05:43]  status_code=0
[2025-10-18 13:05:43]  storage_token=
[2025-10-18 13:05:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6837401954/log.46676269._032583.job.log.tgz.1
[2025-10-18 13:05:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/e8/log.46676269._032583.job.log.tgz.1
[2025-10-18 13:05:43]  workdir=None
[2025-10-18 13:05:43] ]
[2025-10-18 13:05:43] 2025-10-18 17:05:05,635 | INFO     | transferring file log.46676269._032583.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837401954/log.46676269._032583.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-18 13:05:43] 2025-10-18 17:05:05,635 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837401954/log.46676269._032583.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._032583.job
[2025-10-18 13:05:43] 2025-10-18 17:05:05,656 | INFO     | adding to output.list: log.46676269._032583.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/e8/log.46676269._032583.job.log.tg
[2025-10-18 13:05:43] 2025-10-18 17:05:05,657 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 13:05:43] 2025-10-18 17:05:05,657 | INFO     | summary of transferred files:
[2025-10-18 13:05:43] 2025-10-18 17:05:05,657 | INFO     |  -- lfn=log.46676269._032583.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 13:05:43] 2025-10-18 17:05:05,658 | INFO     | stage-out finished correctly
[2025-10-18 13:05:43] 2025-10-18 17:05:06,061 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 13:05:43] 2025-10-18 17:05:06,417 | INFO     | time since job start (4310s) is within the limit (172800.0s)
[2025-10-18 13:05:43] 2025-10-18 17:05:06,803 | INFO     | job 6837401954 has state=finished
[2025-10-18 13:05:43] 2025-10-18 17:05:06,803 | INFO     | preparing for final server update for job 6837401954 in state='finished'
[2025-10-18 13:05:43] 2025-10-18 17:05:06,816 | INFO     | this job has now completed (state=finished)
[2025-10-18 13:05:43] 2025-10-18 17:05:06,816 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 13:05:43] 2025-10-18 17:05:06,816 | INFO     | log transfer has been attempted: DONE
[2025-10-18 13:05:43] 2025-10-18 17:05:06,816 | INFO     | job 6837401954 has finished - writing final server update
[2025-10-18 13:05:43] 2025-10-18 17:05:06,817 | INFO     | total number of processed events: 400 (read)
[2025-10-18 13:05:43] 2025-10-18 17:05:06,817 | INFO     | executing command: lscpu
[2025-10-18 13:05:43] 2025-10-18 17:05:06,847 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 13:05:43] 2025-10-18 17:05:07,601 | INFO     | monitor loop #321: job 0:6837401954 is in state 'finished'
[2025-10-18 13:05:43] 2025-10-18 17:05:07,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 13:05:43] 2025-10-18 17:05:08,422 | INFO     | time since job start (4312s) is within the limit (172800.0s)
[2025-10-18 13:05:43] 2025-10-18 17:05:10,104 | INFO     | monitor loop #322: job 0:6837401954 is in state 'finished'
[2025-10-18 13:05:43] 2025-10-18 17:05:10,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 13:05:43] 2025-10-18 17:05:10,428 | INFO     | time since job start (4314s) is within the limit (172800.0s)
[2025-10-18 13:05:43] 2025-10-18 17:05:11,424 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-18 13:05:43] 2025-10-18 17:05:11,428 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-18 13:05:43] 2025-10-18 17:05:11,430 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837401954/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 13:05:43] 2025-10-18 17:05:11,431 | INFO     | extracted standard info from prmon json
[2025-10-18 13:05:43] 2025-10-18 17:05:11,431 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 13:05:43] 2025-10-18 17:05:11,431 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 13:05:43] 2025-10-18 17:05:11,432 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 13:05:43] 2025-10-18 17:05:11,432 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 13:05:43] 2025-10-18 17:05:11,434 | INFO     | fitting pss+swap vs Time
[2025-10-18 13:05:43] 2025-10-18 17:05:11,434 | INFO     | sum of square deviations: 81266640.0
[2025-10-18 13:05:43] 2025-10-18 17:05:11,434 | INFO     | sum of deviations: -5882650686.5
[2025-10-18 13:05:43] 2025-10-18 17:05:11,434 | INFO     | mean x: 1760805052.5
[2025-10-18 13:05:43] 2025-10-18 17:05:11,435 | INFO     | mean y: 2748280.890625
[2025-10-18 13:05:43] 2025-10-18 17:05:11,435 | INFO     | -- intersect: 127462195981.46977
[2025-10-18 13:05:43] 2025-10-18 17:05:11,435 | INFO     | intersect: 127462195981.46977
[2025-10-18 13:05:43] 2025-10-18 17:05:11,435 | INFO     | chi2: 0.054282361619585336
[2025-10-18 13:05:43] 2025-10-18 17:05:11,435 | INFO     | -- intersect: 127462195981.46977
[2025-10-18 13:05:43] 2025-10-18 17:05:11,435 | INFO     | current memory leak: -72.39 B/s (using 64 data points, chi2=0.05)
[2025-10-18 13:05:43] 2025-10-18 17:05:11,436 | INFO     | could have reported an average CPU frequency of 2036 MHz (6 samples)
[2025-10-18 13:05:43] 2025-10-18 17:05:11,436 | INFO     | ..............................
[2025-10-18 13:05:43] 2025-10-18 17:05:11,436 | INFO     | . Timing measurements:
[2025-10-18 13:05:43] 2025-10-18 17:05:11,436 | INFO     | . get job = 0 s
[2025-10-18 13:05:43] 2025-10-18 17:05:11,436 | INFO     | . initial setup = 2 s
[2025-10-18 13:05:43] 2025-10-18 17:05:11,436 | INFO     | . payload setup = 7 s
[2025-10-18 13:05:43] 2025-10-18 17:05:11,436 | INFO     | . stage-in = 0 s
[2025-10-18 13:05:43] 2025-10-18 17:05:11,436 | INFO     | . payload execution = 4281 s
[2025-10-18 13:05:43] 2025-10-18 17:05:11,437 | INFO     | . stage-out = 0 s
[2025-10-18 13:05:43] 2025-10-18 17:05:11,437 | INFO     | . log creation = 0 s
[2025-10-18 13:05:43] 2025-10-18 17:05:11,437 | INFO     | ..............................
[2025-10-18 13:05:43] 2025-10-18 17:05:11,518 | INFO     | 
[2025-10-18 13:05:43] 2025-10-18 17:05:11,518 | INFO     | job summary report
[2025-10-18 13:05:43] 2025-10-18 17:05:11,519 | INFO     | --------------------------------------------------
[2025-10-18 13:05:43] 2025-10-18 17:05:11,519 | INFO     | PanDA job id: 6837401954
[2025-10-18 13:05:43] 2025-10-18 17:05:11,519 | INFO     | task id: 46676269
[2025-10-18 13:05:43] 2025-10-18 17:05:11,519 | INFO     | errors: (none)
[2025-10-18 13:05:43] 2025-10-18 17:05:11,519 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 13:05:43] 2025-10-18 17:05:11,519 | INFO     | pilot state: finished 
[2025-10-18 13:05:43] 2025-10-18 17:05:11,520 | INFO     | transexitcode: 0
[2025-10-18 13:05:43] 2025-10-18 17:05:11,520 | INFO     | exeerrorcode: 0
[2025-10-18 13:05:43] 2025-10-18 17:05:11,520 | INFO     | exeerrordiag: 
[2025-10-18 13:05:43] 2025-10-18 17:05:11,520 | INFO     | exitcode: 0
[2025-10-18 13:05:43] 2025-10-18 17:05:11,520 | INFO     | exitmsg: OK
[2025-10-18 13:05:43] 2025-10-18 17:05:11,520 | INFO     | cpuconsumptiontime: 46671 s
[2025-10-18 13:05:43] 2025-10-18 17:05:11,521 | INFO     | nevents: 400
[2025-10-18 13:05:43] 2025-10-18 17:05:11,521 | INFO     | neventsw: 0
[2025-10-18 13:05:43] 2025-10-18 17:05:11,521 | INFO     | pid: 12184
[2025-10-18 13:05:43] 2025-10-18 17:05:11,521 | INFO     | pgrp: 12184
[2025-10-18 13:05:43] 2025-10-18 17:05:11,521 | INFO     | corecount: 12
[2025-10-18 13:05:43] 2025-10-18 17:05:11,521 | INFO     | event service: False
[2025-10-18 13:05:43] 2025-10-18 17:05:11,522 | INFO     | sizes: {0: 2348749, 1: 2348948, 6: 2349210, 11: 2349238, 4292: 2375259, 4293: 2384441, 4299: 2384579}
[2025-10-18 13:05:43] 2025-10-18 17:05:11,522 | INFO     | --------------------------------------------------
[2025-10-18 13:05:43] 2025-10-18 17:05:11,522 | INFO     | 
[2025-10-18 13:05:43] 2025-10-18 17:05:11,522 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 13:05:43] 2025-10-18 17:05:11,543 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,544 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,544 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,544 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,544 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,544 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,544 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,545 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,545 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,545 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,545 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,545 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,545 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,546 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,546 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,546 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,546 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 13:05:43] 2025-10-18 17:05:11,546 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,547 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 13:05:43] 2025-10-18 17:05:11,547 | INFO     | job 6837401954 has completed (purged errors)
[2025-10-18 13:05:43] 2025-10-18 17:05:11,547 | INFO     | overall cleanup function is called
[2025-10-18 13:05:43] 2025-10-18 17:05:12,551 | INFO     | --- collectZombieJob: --- 10, [12184]
[2025-10-18 13:05:43] 2025-10-18 17:05:12,551 | INFO     | zombie collector waiting for pid 12184
[2025-10-18 13:05:43] 2025-10-18 17:05:12,551 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 13:05:43] 2025-10-18 17:05:12,551 | INFO     | collected zombie processes
[2025-10-18 13:05:43] 2025-10-18 17:05:12,551 | INFO     | will attempt to kill all subprocesses of pid=12184
[2025-10-18 13:05:43] 2025-10-18 17:05:12,645 | INFO     | process IDs to be killed: [12184] (in reverse order)
[2025-10-18 13:05:43] 2025-10-18 17:05:12,696 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 13:05:43] 2025-10-18 17:05:12,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 13:05:43] 2025-10-18 17:05:12,700 | INFO     | did not find any defunct processes belonging to 12184
[2025-10-18 13:05:43] 2025-10-18 17:05:12,703 | INFO     | did not find any defunct processes belonging to 12184
[2025-10-18 13:05:43] 2025-10-18 17:05:12,704 | INFO     | ready for new job
[2025-10-18 13:05:43] 2025-10-18 17:05:12,704 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 13:05:43] 2025-10-18 17:05:12,705 | INFO     | ***************************************
[2025-10-18 13:05:43] 2025-10-18 17:05:12,705 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 13:05:43] 2025-10-18 17:05:12,705 | INFO     | ***************************************
[2025-10-18 13:05:43] 2025-10-18 17:05:12,705 | INFO     | 
[2025-10-18 13:05:43] 2025-10-18 17:05:12,706 | INFO     | architecture information:
[2025-10-18 13:05:43] 2025-10-18 17:05:12,706 | INFO     | executing command: cat /etc/os-release
[2025-10-18 13:05:43] 2025-10-18 17:05:12,721 | INFO     | cat /etc/os-release:
[2025-10-18 13:05:43] NAME="CentOS Linux"
[2025-10-18 13:05:43] VERSION="7 (Core)"
[2025-10-18 13:05:43] ID="centos"
[2025-10-18 13:05:43] ID_LIKE="rhel fedora"
[2025-10-18 13:05:43] VERSION_ID="7"
[2025-10-18 13:05:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 13:05:43] ANSI_COLOR="0;31"
[2025-10-18 13:05:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 13:05:43] HOME_URL="https://www.centos.org/"
[2025-10-18 13:05:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 13:05:43] 
[2025-10-18 13:05:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 13:05:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 13:05:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 13:05:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 13:05:43] 
[2025-10-18 13:05:43] 2025-10-18 17:05:12,721 | INFO     | ***************************************
[2025-10-18 13:05:43] 2025-10-18 17:05:13,223 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 13:05:43] 2025-10-18 17:05:13,239 | INFO     | sufficient remaining disk space (29361176576 B)
[2025-10-18 13:05:43] 2025-10-18 17:05:13,239 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 13:05:43] 2025-10-18 17:05:13,239 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 13:05:43] 2025-10-18 17:05:13,239 | INFO     | update_server=False
[2025-10-18 13:05:43] 2025-10-18 17:05:13,239 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 13:05:43] 2025-10-18 17:05:13,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 13:05:43] 2025-10-18 17:05:13,412 | INFO     | all payload control threads have been joined
[2025-10-18 13:05:43] 2025-10-18 17:05:13,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 13:05:43] 2025-10-18 17:05:13,612 | INFO     | aborting loop
[2025-10-18 13:05:43] 2025-10-18 17:05:13,618 | INFO     | all data control threads have been joined
[2025-10-18 13:05:43] 2025-10-18 17:05:13,681 | INFO     | all job control threads have been joined
[2025-10-18 13:05:43] 2025-10-18 17:05:13,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 13:05:43] 2025-10-18 17:05:14,245 | INFO     | [job] queue monitor thread has finished
[2025-10-18 13:05:43] 2025-10-18 17:05:14,245 | INFO     | [job] retrieve thread has finished
[2025-10-18 13:05:43] 2025-10-18 17:05:14,417 | INFO     | [payload] control thread has finished
[2025-10-18 13:05:43] 2025-10-18 17:05:14,617 | INFO     | [job] job monitor thread has finished
[2025-10-18 13:05:43] 2025-10-18 17:05:14,623 | INFO     | [data] control thread has finished
[2025-10-18 13:05:43] 2025-10-18 17:05:14,683 | INFO     | [job] validate thread has finished
[2025-10-18 13:05:43] 2025-10-18 17:05:14,683 | INFO     | [job] control thread has finished
[2025-10-18 13:05:43] 2025-10-18 17:05:14,796 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 13:05:43] 2025-10-18 17:05:14,934 | INFO     | [payload] failed_post thread has finished
[2025-10-18 13:05:43] 2025-10-18 17:05:15,157 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 13:05:43] 2025-10-18 17:05:15,298 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 13:05:43] 2025-10-18 17:05:15,516 | INFO     | [payload] validate_post thread has finished
[2025-10-18 13:05:43] 2025-10-18 17:05:15,737 | INFO     | [data] copytool_in thread has finished
[2025-10-18 13:05:43] 2025-10-18 17:05:15,759 | INFO     | [data] copytool_out thread has finished
[2025-10-18 13:05:43] 2025-10-18 17:05:16,653 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 13:05:43] 2025-10-18 17:05:20,658 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 13:05:43] 2025-10-18 17:05:23,278 | INFO     | job.realtimelogging is not enabled
[2025-10-18 13:05:43] 2025-10-18 17:05:23,342 | INFO     | [monitor] cgroup control has ended
[2025-10-18 13:05:43] 2025-10-18 17:05:24,283 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 13:05:43] 2025-10-18 17:05:25,685 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139810529072960)>', '<ExcThread(monitor, started 139810068997888)>']
[2025-10-18 13:05:43] 2025-10-18 17:05:30,695 | INFO     | all workflow threads have been joined
[2025-10-18 13:05:43] 2025-10-18 17:05:30,695 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 13:05:43] 2025-10-18 17:05:30,695 | INFO     | traces error code: 0
[2025-10-18 13:05:43] 2025-10-18 17:05:30,695 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 13:05:43] 2025-10-18 17:05:43,629 | INFO     | PID=5812 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-18 13:05:43] 2025-10-18 17:05:43,630 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 13:05:43] 2025-10-18 17:05:43,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 13:05:43] 2025-10-18 17:05:43,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 13:05:43] 2025-10-18 17:05:43,630 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 13:05:43] 2025-10-18 17:05:43,630 | INFO     | [monitor] control thread has ended
[2025-10-18 13:05:43] 2025-10-18 17:05:43,713 [wrapper] ==== pilot stdout END ====
[2025-10-18 13:05:43] 2025-10-18 17:05:43,716 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 13:05:43] 2025-10-18 17:05:43,720 [wrapper] pilotpid: 5812
[2025-10-18 13:05:43] 2025-10-18 17:05:43,724 [wrapper] Pilot exit status: 0
[2025-10-18 13:05:43] 2025-10-18 17:05:43,740 [wrapper] pandaids: 6837401954
[2025-10-18 13:05:43] 2025-10-18 17:05:43,781 [wrapper] cleanup supervisor_pilot 20201 5813
[2025-10-18 13:05:43] 2025-10-18 17:05:43,785 [wrapper] Test setup, not cleaning
[2025-10-18 13:05:43] 2025-10-18 17:05:43,789 [wrapper] apfmon messages muted
[2025-10-18 13:05:43] 2025-10-18 17:05:43,793 [wrapper] ==== wrapper stdout END ====
[2025-10-18 13:05:43] 2025-10-18 17:05:43,796 [wrapper] ==== wrapper stderr END ====
[2025-10-18 13:05:43]  *** Error codes and diagnostics ***
[2025-10-18 13:05:43]     "exeErrorCode": 0,
[2025-10-18 13:05:43]     "exeErrorDiag": "",
[2025-10-18 13:05:43]     "pilotErrorCode": 0,
[2025-10-18 13:05:43]     "pilotErrorDiag": "",
[2025-10-18 13:05:43]  *** Listing of results directory ***
[2025-10-18 13:05:43] total 413328
[2025-10-18 13:05:43] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 00:33 pilot3.tar.gz
[2025-10-18 13:05:43] -rwx------ 1 boincer umatlas     36292 Oct 10 00:36 runpilot2-wrapper.sh
[2025-10-18 13:05:43] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 00:36 queuedata.json
[2025-10-18 13:05:43] -rw-r--r-- 1 boincer umatlas       100 Oct 18 11:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 13:05:43] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 11:52 run_atlas
[2025-10-18 13:05:43] -rw-r--r-- 1 boincer umatlas       105 Oct 18 11:52 job.xml
[2025-10-18 13:05:43] -rw-r--r-- 2 boincer umatlas 219425458 Oct 18 11:52 EVNT.46676267._001327.pool.root.1
[2025-10-18 13:05:43] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 11:53 start_atlas.sh
[2025-10-18 13:05:43] drwxrwx--x 2 boincer umatlas      4096 Oct 18 11:53 shared
[2025-10-18 13:05:43] -rw-r--r-- 2 boincer umatlas    569677 Oct 18 11:53 input.tar.gz
[2025-10-18 13:05:43] -rw-r--r-- 1 boincer umatlas         0 Oct 18 11:53 boinc_lockfile
[2025-10-18 13:05:43] -rw-r--r-- 1 boincer umatlas      2549 Oct 18 11:53 pandaJob.out
[2025-10-18 13:05:43] -rw------- 1 boincer umatlas    976750 Oct 18 11:53 agis_schedconf.cvmfs.json
[2025-10-18 13:05:43] -rw------- 1 boincer umatlas   1560740 Oct 18 11:53 agis_ddmendpoints.agis.ALL.json
[2025-10-18 13:05:43] drwx------ 5 boincer umatlas      4096 Oct 18 11:53 pilot3
[2025-10-18 13:05:43] -rw-r--r-- 1 boincer umatlas      5953 Oct 18 13:03 init_data.xml
[2025-10-18 13:05:43] -rw-r--r-- 1 boincer umatlas       529 Oct 18 13:04 boinc_task_state.xml
[2025-10-18 13:05:43] -rw------- 1 boincer umatlas 197893491 Oct 18 13:04 HITS.46676269._032583.pool.root.1
[2025-10-18 13:05:43] -rw------- 1 boincer umatlas      1049 Oct 18 13:05 memory_monitor_summary.json
[2025-10-18 13:05:43] -rw------- 1 boincer umatlas    386061 Oct 18 13:05 log.46676269._032583.job.log.tgz.1
[2025-10-18 13:05:43] -rw------- 1 boincer umatlas      7858 Oct 18 13:05 heartbeat.json
[2025-10-18 13:05:43] -rw-r--r-- 1 boincer umatlas        27 Oct 18 13:05 wrapper_checkpoint.txt
[2025-10-18 13:05:43] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 13:05 boinc_mmap_file
[2025-10-18 13:05:43] -rw------- 1 boincer umatlas        95 Oct 18 13:05 pilot_heartbeat.json
[2025-10-18 13:05:43] -rw------- 1 boincer umatlas       744 Oct 18 13:05 pilotlog.txt
[2025-10-18 13:05:43] -rw------- 1 boincer umatlas    627665 Oct 18 13:05 log.46676269._032583.job.log.1
[2025-10-18 13:05:43] -rw------- 1 boincer umatlas       357 Oct 18 13:05 output.list
[2025-10-18 13:05:43] -rw-r--r-- 1 boincer umatlas       620 Oct 18 13:05 runtime_log
[2025-10-18 13:05:43] -rw------- 1 boincer umatlas   1034240 Oct 18 13:05 result.tar.gz
[2025-10-18 13:05:43] -rw-r--r-- 1 boincer umatlas      8705 Oct 18 13:05 runtime_log.err
[2025-10-18 13:05:43] -rw------- 1 boincer umatlas       659 Oct 18 13:05 nauKDmP3JR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDMcNDmaHBZPm.diag
[2025-10-18 13:05:43] -rw-r--r-- 1 boincer umatlas     21642 Oct 18 13:05 stderr.txt
[2025-10-18 13:05:43] HITS file was successfully produced:
[2025-10-18 13:05:43] -rw------- 1 boincer umatlas 197893491 Oct 18 13:04 shared/HITS.pool.root.1
[2025-10-18 13:05:43]  *** Contents of shared directory: ***
[2025-10-18 13:05:43] total 409132
[2025-10-18 13:05:43] -rw-r--r-- 2 boincer umatlas 219425458 Oct 18 11:52 ATLAS.root_0
[2025-10-18 13:05:43] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 11:53 start_atlas.sh
[2025-10-18 13:05:43] -rw-r--r-- 2 boincer umatlas    569677 Oct 18 11:53 input.tar.gz
[2025-10-18 13:05:43] -rw------- 1 boincer umatlas 197893491 Oct 18 13:04 HITS.pool.root.1
[2025-10-18 13:05:43] -rw------- 1 boincer umatlas   1034240 Oct 18 13:05 result.tar.gz
13:05:45 (2024): run_atlas exited; CPU time 46643.347648
13:05:45 (2024): called boinc_finish(0)

</stderr_txt>
]]>

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