Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:06:38 (3719612): wrapper (7.7.26015): starting
04:06:38 (3719612): wrapper: running run_atlas (--nthreads 2)
[2025-10-19 04:06:38] Arguments: --nthreads 2
[2025-10-19 04:06:38] Threads: 2
[2025-10-19 04:06:38] Checking for CVMFS
[2025-10-19 04:06:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 04:06:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 04:06:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 04:06:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 04:06:38] 2.9.2.0 2746064 4435 61684 151870 2 57 28877083 36864000 0 130560 0 2530492 99.988 157956 2889 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-19 04:06:38] CVMFS is ok
[2025-10-19 04:06:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 04:06:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 04:06:38] Further information can be found at the LHC@home message board.
[2025-10-19 04:06:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 04:06:38] Checking for apptainer binary...
[2025-10-19 04:06:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 04:06:38] Running /usr/bin/apptainer --version
[2025-10-19 04:06:38] apptainer version 1.4.1-1.1
[2025-10-19 04:06:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 04:06:38] thA337
[2025-10-19 04:06:38] apptainer works
[2025-10-19 04:06:38] Set ATHENA_PROC_NUMBER=2
[2025-10-19 04:06:38] Set ATHENA_CORE_NUMBER=2
[2025-10-19 04:06:38] Starting ATLAS job with PandaID=6850205692
[2025-10-19 04:06:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 05:45:04]  *** The last 200 lines of the pilot log: ***
[2025-10-19 05:45:04] 2025-10-19 03:44:28,254 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 05:45:04] 2025-10-19 03:44:28,255 | INFO     | ***************************************
[2025-10-19 05:45:04] 2025-10-19 03:44:28,256 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 05:45:04] 2025-10-19 03:44:28,256 | INFO     | ***************************************
[2025-10-19 05:45:04] 2025-10-19 03:44:28,256 | INFO     | 
[2025-10-19 05:45:04] 2025-10-19 03:44:28,257 | INFO     | architecture information:
[2025-10-19 05:45:04] 2025-10-19 03:44:28,257 | INFO     | executing command: cat /etc/os-release
[2025-10-19 05:45:04] 2025-10-19 03:44:28,284 | INFO     | cat /etc/os-release:
[2025-10-19 05:45:04] NAME="CentOS Linux"
[2025-10-19 05:45:04] VERSION="7 (Core)"
[2025-10-19 05:45:04] ID="centos"
[2025-10-19 05:45:04] ID_LIKE="rhel fedora"
[2025-10-19 05:45:04] VERSION_ID="7"
[2025-10-19 05:45:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 05:45:04] ANSI_COLOR="0;31"
[2025-10-19 05:45:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 05:45:04] HOME_URL="https://www.centos.org/"
[2025-10-19 05:45:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 05:45:04] 
[2025-10-19 05:45:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 05:45:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 05:45:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 05:45:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 05:45:04] 
[2025-10-19 05:45:04] 2025-10-19 03:44:28,284 | INFO     | ***************************************
[2025-10-19 05:45:04] 2025-10-19 03:44:28,788 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-19 05:45:04] 2025-10-19 03:44:28,799 | INFO     | sufficient remaining disk space (482586132480 B)
[2025-10-19 05:45:04] 2025-10-19 03:44:28,799 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 05:45:04] 2025-10-19 03:44:28,799 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 05:45:04] 2025-10-19 03:44:28,799 | INFO     | update_server=False
[2025-10-19 05:45:04] 2025-10-19 03:44:28,799 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 05:45:04] 2025-10-19 03:44:28,799 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 05:45:04] 2025-10-19 03:44:28,799 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 05:45:04] 2025-10-19 03:44:28,799 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 05:45:04] 2025-10-19 03:44:28,800 | INFO     | aborting loop
[2025-10-19 05:45:04] 2025-10-19 03:44:28,976 | INFO     | all payload control threads have been joined
[2025-10-19 05:45:04] 2025-10-19 03:44:29,034 | INFO     | all data control threads have been joined
[2025-10-19 05:45:04] 2025-10-19 03:44:29,224 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 05:45:04] 2025-10-19 03:44:29,743 | INFO     | all job control threads have been joined
[2025-10-19 05:45:04] 2025-10-19 03:44:29,805 | INFO     | [job] retrieve thread has finished
[2025-10-19 05:45:04] 2025-10-19 03:44:29,806 | INFO     | [job] queue monitor thread has finished
[2025-10-19 05:45:04] 2025-10-19 03:44:29,807 | INFO     | [job] job monitor thread has finished
[2025-10-19 05:45:04] 2025-10-19 03:44:29,889 | INFO     | [data] copytool_in thread has finished
[2025-10-19 05:45:04] 2025-10-19 03:44:29,982 | INFO     | [payload] control thread has finished
[2025-10-19 05:45:04] 2025-10-19 03:44:30,002 | INFO     | [payload] validate_post thread has finished
[2025-10-19 05:45:04] 2025-10-19 03:44:30,020 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 05:45:04] 2025-10-19 03:44:30,040 | INFO     | [data] control thread has finished
[2025-10-19 05:45:04] 2025-10-19 03:44:30,525 | INFO     | [job] validate thread has finished
[2025-10-19 05:45:04] 2025-10-19 03:44:30,530 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 05:45:04] 2025-10-19 03:44:30,577 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 05:45:04] 2025-10-19 03:44:30,657 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 05:45:04] 2025-10-19 03:44:30,749 | INFO     | [job] control thread has finished
[2025-10-19 05:45:04] 2025-10-19 03:44:31,062 | INFO     | [payload] failed_post thread has finished
[2025-10-19 05:45:04] 2025-10-19 03:44:31,231 | INFO     | [data] copytool_out thread has finished
[2025-10-19 05:45:04] 2025-10-19 03:44:32,806 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 05:45:04] 2025-10-19 03:44:59,079 | INFO     | PID=3723314 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-19 05:45:04] 2025-10-19 03:44:59,079 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 05:45:04] 2025-10-19 03:44:59,079 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 05:45:04] 2025-10-19 03:44:59,079 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 05:45:04] 2025-10-19 03:44:59,195 | INFO     | [monitor] cgroup control has ended
[2025-10-19 05:45:04] 2025-10-19 03:44:59,713 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139719135041344)>', '<ExcThread(monitor, started 139718322788096)>']
[2025-10-19 05:45:04] 2025-10-19 03:45:00,084 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 05:45:04] 2025-10-19 03:45:00,084 | INFO     | [monitor] control thread has ended
[2025-10-19 05:45:04] 2025-10-19 03:45:04,719 | INFO     | all workflow threads have been joined
[2025-10-19 05:45:04] 2025-10-19 03:45:04,720 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 05:45:04] 2025-10-19 03:45:04,720 | INFO     | traces error code: 0
[2025-10-19 05:45:04] 2025-10-19 03:45:04,721 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 05:45:04] 2025-10-19 03:45:04,763 [wrapper] ==== pilot stdout END ====
[2025-10-19 05:45:04] 2025-10-19 03:45:04,765 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 05:45:04] 2025-10-19 03:45:04,767 [wrapper] pilotpid: 3723314
[2025-10-19 05:45:04] 2025-10-19 03:45:04,769 [wrapper] Pilot exit status: 0
[2025-10-19 05:45:04] 2025-10-19 03:45:04,775 [wrapper] pandaids: 6850205692
[2025-10-19 05:45:04] 2025-10-19 03:45:04,788 [wrapper] cleanup supervisor_pilot 3741981 3723315
[2025-10-19 05:45:04] 2025-10-19 03:45:04,790 [wrapper] Test setup, not cleaning
[2025-10-19 05:45:04] 2025-10-19 03:45:04,792 [wrapper] apfmon messages muted
[2025-10-19 05:45:04] 2025-10-19 03:45:04,794 [wrapper] ==== wrapper stdout END ====
[2025-10-19 05:45:04] 2025-10-19 03:45:04,796 [wrapper] ==== wrapper stderr END ====
[2025-10-19 05:45:04]  *** Error codes and diagnostics ***
[2025-10-19 05:45:04]     "exeErrorCode": 0,
[2025-10-19 05:45:04]     "exeErrorDiag": "",
[2025-10-19 05:45:04]     "pilotErrorCode": 0,
[2025-10-19 05:45:04]     "pilotErrorDiag": "",
[2025-10-19 05:45:04]  *** Listing of results directory ***
[2025-10-19 05:45:04] total 335040
[2025-10-19 05:45:04] -rw-r--r-- 1 boinc boinc    557409 Oct 18 15:39 pilot3.tar.gz
[2025-10-19 05:45:04] -rwx------ 1 boinc boinc     36292 Oct 18 16:00 runpilot2-wrapper.sh
[2025-10-19 05:45:04] -rw-r--r-- 1 boinc boinc      5112 Oct 18 16:00 queuedata.json
[2025-10-19 05:45:04] -rw-r--r-- 1 boinc boinc       100 Oct 19 04:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 05:45:04] -rwxr-xr-x 1 boinc boinc      7986 Oct 19 04:06 run_atlas
[2025-10-19 05:45:04] -rw-r--r-- 1 boinc boinc       105 Oct 19 04:06 job.xml
[2025-10-19 05:45:04] -rw-r--r-- 2 boinc boinc 188878332 Oct 19 04:06 EVNT.46809186._000086.pool.root.1
[2025-10-19 05:45:04] -rw-r--r-- 2 boinc boinc    569670 Oct 19 04:06 input.tar.gz
[2025-10-19 05:45:04] -rw-r--r-- 2 boinc boinc     15120 Oct 19 04:06 start_atlas.sh
[2025-10-19 05:45:04] drwxrwx--x 2 boinc boinc      4096 Oct 19 04:06 shared
[2025-10-19 05:45:04] -rw-r--r-- 1 boinc boinc         0 Oct 19 04:06 boinc_setup_complete
[2025-10-19 05:45:04] -rw-r--r-- 1 boinc boinc      6205 Oct 19 04:06 init_data.xml
[2025-10-19 05:45:04] -rw-r--r-- 1 boinc boinc         0 Oct 19 04:06 boinc_lockfile
[2025-10-19 05:45:04] -rw-r--r-- 1 boinc boinc      2489 Oct 19 04:06 pandaJob.out
[2025-10-19 05:45:04] -rw------- 1 boinc boinc    976750 Oct 19 04:06 agis_schedconf.cvmfs.json
[2025-10-19 05:45:04] -rw------- 1 boinc boinc   1560740 Oct 19 04:06 agis_ddmendpoints.agis.ALL.json
[2025-10-19 05:45:04] drwx------ 5 boinc boinc      4096 Oct 19 04:06 pilot3
[2025-10-19 05:45:04] -rw------- 1 boinc boinc 148110197 Oct 19 05:43 HITS.46809188._002205.pool.root.1
[2025-10-19 05:45:04] -rw-r--r-- 1 boinc boinc       529 Oct 19 05:44 boinc_task_state.xml
[2025-10-19 05:45:04] -rw------- 1 boinc boinc      1013 Oct 19 05:44 memory_monitor_summary.json
[2025-10-19 05:45:04] -rw------- 1 boinc boinc    248496 Oct 19 05:44 log.46809188._002205.job.log.tgz.1
[2025-10-19 05:45:04] -rw------- 1 boinc boinc        95 Oct 19 05:44 pilot_heartbeat.json
[2025-10-19 05:45:04] -rw------- 1 boinc boinc      7754 Oct 19 05:44 heartbeat.json
[2025-10-19 05:45:04] -rw-r--r-- 1 boinc boinc        27 Oct 19 05:45 wrapper_checkpoint.txt
[2025-10-19 05:45:04] -rw-r--r-- 1 boinc boinc      8192 Oct 19 05:45 boinc_mmap_file
[2025-10-19 05:45:04] -rw------- 1 boinc boinc      4752 Oct 19 05:45 pilotlog.txt
[2025-10-19 05:45:04] -rw------- 1 boinc boinc    852665 Oct 19 05:45 log.46809188._002205.job.log.1
[2025-10-19 05:45:04] -rw------- 1 boinc boinc       357 Oct 19 05:45 output.list
[2025-10-19 05:45:04] -rw-r--r-- 1 boinc boinc       620 Oct 19 05:45 runtime_log
[2025-10-19 05:45:04] -rw------- 1 boinc boinc   1116160 Oct 19 05:45 result.tar.gz
[2025-10-19 05:45:04] -rw-r--r-- 1 boinc boinc      8777 Oct 19 05:45 runtime_log.err
[2025-10-19 05:45:04] -rw------- 1 boinc boinc       658 Oct 19 05:45 ixDODmgeMU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRJcMDm9L89Fn.diag
[2025-10-19 05:45:04] -rw-r--r-- 1 boinc boinc      9449 Oct 19 05:45 stderr.txt
[2025-10-19 05:45:04] HITS file was successfully produced:
[2025-10-19 05:45:04] -rw------- 1 boinc boinc 148110197 Oct 19 05:43 shared/HITS.pool.root.1
[2025-10-19 05:45:04]  *** Contents of shared directory: ***
[2025-10-19 05:45:04] total 330768
[2025-10-19 05:45:04] -rw-r--r-- 2 boinc boinc 188878332 Oct 19 04:06 ATLAS.root_0
[2025-10-19 05:45:04] -rw-r--r-- 2 boinc boinc    569670 Oct 19 04:06 input.tar.gz
[2025-10-19 05:45:04] -rw-r--r-- 2 boinc boinc     15120 Oct 19 04:06 start_atlas.sh
[2025-10-19 05:45:04] -rw------- 1 boinc boinc 148110197 Oct 19 05:43 HITS.pool.root.1
[2025-10-19 05:45:04] -rw------- 1 boinc boinc   1116160 Oct 19 05:45 result.tar.gz
05:45:06 (3719612): run_atlas exited; CPU time 11292.887090
05:45:06 (3719612): called boinc_finish(0)

</stderr_txt>
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