Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:45:59 (1342493): wrapper (7.7.26015): starting
02:45:59 (1342493): wrapper: running run_atlas (--nthreads 3)
[2025-10-19 02:45:59] Arguments: --nthreads 3
[2025-10-19 02:45:59] Threads: 3
[2025-10-19 02:45:59] Checking for CVMFS
[2025-10-19 02:45:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 02:45:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 02:45:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 02:45:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 02:45:59] 2.9.2.0 114696 4209 84156 151869 1 57 31162643 36864000 0 130560 0 3184670 99.990 150375 2877 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-19 02:45:59] CVMFS is ok
[2025-10-19 02:45:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 02:45:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 02:45:59] Further information can be found at the LHC@home message board.
[2025-10-19 02:45:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 02:45:59] Checking for apptainer binary...
[2025-10-19 02:45:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 02:45:59] Running /usr/bin/apptainer --version
[2025-10-19 02:45:59] apptainer version 1.4.1-1.1
[2025-10-19 02:45:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 02:45:59] magicA246a
[2025-10-19 02:45:59] apptainer works
[2025-10-19 02:45:59] Set ATHENA_PROC_NUMBER=3
[2025-10-19 02:45:59] Set ATHENA_CORE_NUMBER=3
[2025-10-19 02:45:59] Starting ATLAS job with PandaID=6848020172
[2025-10-19 02:45:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 04:17:24]  *** The last 200 lines of the pilot log: ***
[2025-10-19 04:17:24] 2025-10-19 02:17:06,595 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 04:17:24] 2025-10-19 02:17:06,850 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-19 04:17:24] 2025-10-19 02:17:06,850 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-19 04:17:24] 2025-10-19 02:17:06,850 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 04:17:24] 2025-10-19 02:17:06,850 | INFO     | will abort loop
[2025-10-19 04:17:24] 2025-10-19 02:17:07,093 | INFO     | all data control threads have been joined
[2025-10-19 04:17:24] 2025-10-19 02:17:07,471 | INFO     | all payload control threads have been joined
[2025-10-19 04:17:24] 2025-10-19 02:17:07,596 | INFO     | [job] retrieve thread has finished
[2025-10-19 04:17:24] 2025-10-19 02:17:07,601 | INFO     | [job] queue monitor thread has finished
[2025-10-19 04:17:24] 2025-10-19 02:17:07,688 | INFO     | [payload] failed_post thread has finished
[2025-10-19 04:17:24] 2025-10-19 02:17:07,856 | INFO     | [job] job monitor thread has finished
[2025-10-19 04:17:24] 2025-10-19 02:17:07,889 | INFO     | [data] copytool_in thread has finished
[2025-10-19 04:17:24] 2025-10-19 02:17:08,099 | INFO     | [data] control thread has finished
[2025-10-19 04:17:24] 2025-10-19 02:17:08,204 | INFO     | all job control threads have been joined
[2025-10-19 04:17:24] 2025-10-19 02:17:08,340 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 04:17:24] 2025-10-19 02:17:08,371 | INFO     | [job] validate thread has finished
[2025-10-19 04:17:24] 2025-10-19 02:17:08,472 | INFO     | [payload] control thread has finished
[2025-10-19 04:17:24] 2025-10-19 02:17:08,510 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 04:17:24] 2025-10-19 02:17:08,510 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 04:17:24] 2025-10-19 02:17:08,601 | INFO     | [data] copytool_out thread has finished
[2025-10-19 04:17:24] 2025-10-19 02:17:08,869 | INFO     | [payload] validate_post thread has finished
[2025-10-19 04:17:24] 2025-10-19 02:17:09,210 | INFO     | [job] control thread has finished
[2025-10-19 04:17:24] 2025-10-19 02:17:10,602 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 04:17:24] 2025-10-19 02:17:11,935 | INFO     | [monitor] cgroup control has ended
[2025-10-19 04:17:24] 2025-10-19 02:17:17,598 | INFO     | job.realtimelogging is not enabled
[2025-10-19 04:17:24] 2025-10-19 02:17:18,604 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 04:17:24] 2025-10-19 02:17:19,551 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140058564785984)>', '<ExcThread(monitor, started 140058292098816)>']
[2025-10-19 04:17:24] 2025-10-19 02:17:19,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 04:17:24] 2025-10-19 02:17:19,660 | INFO     | [monitor] control thread has ended
[2025-10-19 04:17:24] 2025-10-19 02:17:24,576 | INFO     | all workflow threads have been joined
[2025-10-19 04:17:24] 2025-10-19 02:17:24,577 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 04:17:24] 2025-10-19 02:17:24,577 | INFO     | traces error code: 0
[2025-10-19 04:17:24] 2025-10-19 02:17:24,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 04:17:24] 2025-10-19 02:17:24,629 [wrapper] ==== pilot stdout END ====
[2025-10-19 04:17:24] 2025-10-19 02:17:24,632 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 04:17:24] 2025-10-19 02:17:24,634 [wrapper] pilotpid: 1346210
[2025-10-19 04:17:24] 2025-10-19 02:17:24,636 [wrapper] Pilot exit status: 0
[2025-10-19 04:17:24] 2025-10-19 02:17:24,643 [wrapper] pandaids: 6848020172
[2025-10-19 04:17:24] 2025-10-19 02:17:24,659 [wrapper] cleanup supervisor_pilot 1365887 1346211
[2025-10-19 04:17:24] 2025-10-19 02:17:24,662 [wrapper] Test setup, not cleaning
[2025-10-19 04:17:24] 2025-10-19 02:17:24,664 [wrapper] apfmon messages muted
[2025-10-19 04:17:24] 2025-10-19 02:17:24,666 [wrapper] ==== wrapper stdout END ====
[2025-10-19 04:17:24] 2025-10-19 02:17:24,669 [wrapper] ==== wrapper stderr END ====
[2025-10-19 04:17:24]  *** Error codes and diagnostics ***
[2025-10-19 04:17:24]     "exeErrorCode": 0,
[2025-10-19 04:17:24]     "exeErrorDiag": "",
[2025-10-19 04:17:24]     "pilotErrorCode": 0,
[2025-10-19 04:17:24]     "pilotErrorDiag": "",
[2025-10-19 04:17:24]  *** Listing of results directory ***
[2025-10-19 04:17:24] total 433748
[2025-10-19 04:17:24] -rw-r--r-- 1 boinc boinc    557409 Oct 18 05:33 pilot3.tar.gz
[2025-10-19 04:17:24] -rw-r--r-- 1 boinc boinc      5112 Oct 18 05:51 queuedata.json
[2025-10-19 04:17:24] -rwx------ 1 boinc boinc     36292 Oct 18 05:51 runpilot2-wrapper.sh
[2025-10-19 04:17:24] -rw-r--r-- 1 boinc boinc       100 Oct 19 02:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 04:17:24] -rwxr-xr-x 1 boinc boinc      7986 Oct 19 02:45 run_atlas
[2025-10-19 04:17:24] -rw-r--r-- 1 boinc boinc       105 Oct 19 02:45 job.xml
[2025-10-19 04:17:24] -rw-r--r-- 2 boinc boinc 227406517 Oct 19 02:45 EVNT.46771634._000459.pool.root.1
[2025-10-19 04:17:24] drwxrwx--x 2 boinc boinc      4096 Oct 19 02:45 shared
[2025-10-19 04:17:24] -rw-r--r-- 2 boinc boinc    569676 Oct 19 02:45 input.tar.gz
[2025-10-19 04:17:24] -rw-r--r-- 2 boinc boinc     15120 Oct 19 02:45 start_atlas.sh
[2025-10-19 04:17:24] -rw-r--r-- 1 boinc boinc         0 Oct 19 02:45 boinc_setup_complete
[2025-10-19 04:17:24] -rw-r--r-- 1 boinc boinc      6447 Oct 19 02:45 init_data.xml
[2025-10-19 04:17:24] -rw-r--r-- 1 boinc boinc         0 Oct 19 02:45 boinc_lockfile
[2025-10-19 04:17:24] -rw-r--r-- 1 boinc boinc      2557 Oct 19 02:45 pandaJob.out
[2025-10-19 04:17:24] -rw------- 1 boinc boinc    976750 Oct 19 02:46 agis_schedconf.cvmfs.json
[2025-10-19 04:17:24] -rw------- 1 boinc boinc   1560740 Oct 19 02:46 agis_ddmendpoints.agis.ALL.json
[2025-10-19 04:17:24] drwx------ 5 boinc boinc      4096 Oct 19 02:46 pilot3
[2025-10-19 04:17:24] -rw------- 1 boinc boinc        95 Oct 19 04:16 pilot_heartbeat.json
[2025-10-19 04:17:24] -rw------- 1 boinc boinc 210767353 Oct 19 04:16 HITS.46771637._036541.pool.root.1
[2025-10-19 04:17:24] -rw-r--r-- 1 boinc boinc       529 Oct 19 04:16 boinc_task_state.xml
[2025-10-19 04:17:24] -rw------- 1 boinc boinc      1013 Oct 19 04:16 memory_monitor_summary.json
[2025-10-19 04:17:24] -rw------- 1 boinc boinc    251137 Oct 19 04:17 log.46771637._036541.job.log.tgz.1
[2025-10-19 04:17:24] -rw------- 1 boinc boinc      7761 Oct 19 04:17 heartbeat.json
[2025-10-19 04:17:24] -rw-r--r-- 1 boinc boinc      8192 Oct 19 04:17 boinc_mmap_file
[2025-10-19 04:17:24] -rw-r--r-- 1 boinc boinc        27 Oct 19 04:17 wrapper_checkpoint.txt
[2025-10-19 04:17:24] -rw------- 1 boinc boinc      4814 Oct 19 04:17 pilotlog.txt
[2025-10-19 04:17:24] -rw------- 1 boinc boinc    798341 Oct 19 04:17 log.46771637._036541.job.log.1
[2025-10-19 04:17:24] -rw------- 1 boinc boinc       357 Oct 19 04:17 output.list
[2025-10-19 04:17:24] -rw-r--r-- 1 boinc boinc       620 Oct 19 04:17 runtime_log
[2025-10-19 04:17:24] -rw------- 1 boinc boinc   1064960 Oct 19 04:17 result.tar.gz
[2025-10-19 04:17:24] -rw-r--r-- 1 boinc boinc      8797 Oct 19 04:17 runtime_log.err
[2025-10-19 04:17:24] -rw------- 1 boinc boinc       663 Oct 19 04:17 d9ZLDmBADU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDzvNDmXVRHon.diag
[2025-10-19 04:17:24] -rw-r--r-- 1 boinc boinc      6705 Oct 19 04:17 stderr.txt
[2025-10-19 04:17:24] HITS file was successfully produced:
[2025-10-19 04:17:24] -rw------- 1 boinc boinc 210767353 Oct 19 04:16 shared/HITS.pool.root.1
[2025-10-19 04:17:24]  *** Contents of shared directory: ***
[2025-10-19 04:17:24] total 429532
[2025-10-19 04:17:24] -rw-r--r-- 2 boinc boinc 227406517 Oct 19 02:45 ATLAS.root_0
[2025-10-19 04:17:24] -rw-r--r-- 2 boinc boinc    569676 Oct 19 02:45 input.tar.gz
[2025-10-19 04:17:24] -rw-r--r-- 2 boinc boinc     15120 Oct 19 02:45 start_atlas.sh
[2025-10-19 04:17:24] -rw------- 1 boinc boinc 210767353 Oct 19 04:16 HITS.pool.root.1
[2025-10-19 04:17:24] -rw------- 1 boinc boinc   1064960 Oct 19 04:17 result.tar.gz
04:17:26 (1342493): run_atlas exited; CPU time 15639.259056
04:17:26 (1342493): called boinc_finish(0)

</stderr_txt>
]]>

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