Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:11:03 (18752): wrapper (7.7.26015): starting
09:11:03 (18752): wrapper: running run_atlas (--nthreads 8)
[2025-10-18 09:11:03] Arguments: --nthreads 8
[2025-10-18 09:11:03] Threads: 8
[2025-10-18 09:11:03] Checking for CVMFS
[2025-10-18 09:11:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 09:11:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 09:11:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 09:11:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 09:11:04] 2.11.2.0 2698 17185 76460 151851 1 59 11272872 20275200 1 130560 0 9188843 99.988 572153 35833 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 09:11:04] CVMFS is ok
[2025-10-18 09:11:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 09:11:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 09:11:04] Further information can be found at the LHC@home message board.
[2025-10-18 09:11:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 09:11:04] Checking for apptainer binary...
[2025-10-18 09:11:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 09:11:04] Running /usr/bin/apptainer --version
[2025-10-18 09:11:04] apptainer version 1.3.2-1.el7
[2025-10-18 09:11:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 09:11:05] c-204-2.aglt2.org
[2025-10-18 09:11:05] apptainer works
[2025-10-18 09:11:05] Set ATHENA_PROC_NUMBER=8
[2025-10-18 09:11:05] Set ATHENA_CORE_NUMBER=8
[2025-10-18 09:11:05] Starting ATLAS job with PandaID=6848027338
[2025-10-18 09:11:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 11:29:42]  *** The last 200 lines of the pilot log: ***
[2025-10-18 11:29:42] 2025-10-18 15:28:41,708 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 11:29:42] 2025-10-18 15:28:41,708 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 11:29:42] 2025-10-18 15:28:41,709 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 11:29:42] 2025-10-18 15:28:41,711 | INFO     | fitting pss+swap vs Time
[2025-10-18 11:29:42] 2025-10-18 15:28:41,712 | INFO     | sum of square deviations: 762879420.0
[2025-10-18 11:29:42] 2025-10-18 15:28:41,712 | INFO     | sum of deviations: 16171100366.000002
[2025-10-18 11:29:42] 2025-10-18 15:28:41,712 | INFO     | mean x: 1760797201.0
[2025-10-18 11:29:42] 2025-10-18 15:28:41,713 | INFO     | mean y: 2475354.6074074074
[2025-10-18 11:29:42] 2025-10-18 15:28:41,713 | INFO     | -- intersect: -37321939900.35239
[2025-10-18 11:29:42] 2025-10-18 15:28:41,713 | INFO     | intersect: -37321939900.35239
[2025-10-18 11:29:42] 2025-10-18 15:28:41,713 | INFO     | chi2: 2.2370305812086997
[2025-10-18 11:29:42] 2025-10-18 15:28:41,713 | INFO     | sum of square deviations: 681212772.5
[2025-10-18 11:29:42] 2025-10-18 15:28:41,714 | INFO     | sum of deviations: 24315745366.5
[2025-10-18 11:29:42] 2025-10-18 15:28:41,714 | INFO     | mean x: 1760797048.5
[2025-10-18 11:29:42] 2025-10-18 15:28:41,714 | INFO     | mean y: 2490057.2846153844
[2025-10-18 11:29:42] 2025-10-18 15:28:41,714 | INFO     | -- intersect: -62848786961.90949
[2025-10-18 11:29:42] 2025-10-18 15:28:41,715 | INFO     | intersect: -62848786961.90949
[2025-10-18 11:29:42] 2025-10-18 15:28:41,715 | INFO     | chi2: 1.45912349467061
[2025-10-18 11:29:42] 2025-10-18 15:28:41,715 | INFO     | current chi2=1.45912349467061 (change=34.77409263300171 %)
[2025-10-18 11:29:42] 2025-10-18 15:28:41,715 | INFO     | sum of square deviations: 605592750.0
[2025-10-18 11:29:42] 2025-10-18 15:28:41,716 | INFO     | sum of deviations: 23265564456.0
[2025-10-18 11:29:42] 2025-10-18 15:28:41,716 | INFO     | mean x: 1760796896.0
[2025-10-18 11:29:42] 2025-10-18 15:28:41,716 | INFO     | mean y: 2487938.568
[2025-10-18 11:29:42] 2025-10-18 15:28:41,716 | INFO     | -- intersect: -67643522813.39812
[2025-10-18 11:29:42] 2025-10-18 15:28:41,716 | INFO     | intersect: -67643522813.39812
[2025-10-18 11:29:42] 2025-10-18 15:28:41,717 | INFO     | chi2: 1.45927169595485
[2025-10-18 11:29:42] 2025-10-18 15:28:41,717 | INFO     | current chi2=1.45927169595485 (change=-0.010156870530923434 %)
[2025-10-18 11:29:42] 2025-10-18 15:28:41,717 | INFO     | right removable region: 124
[2025-10-18 11:29:42] 2025-10-18 15:28:41,717 | INFO     | sum of square deviations: 681212772.5
[2025-10-18 11:29:42] 2025-10-18 15:28:41,718 | INFO     | sum of deviations: -2504373574.499997
[2025-10-18 11:29:42] 2025-10-18 15:28:41,718 | INFO     | mean x: 1760797353.5
[2025-10-18 11:29:42] 2025-10-18 15:28:41,718 | INFO     | mean y: 2509579.7769230767
[2025-10-18 11:29:42] 2025-10-18 15:28:41,718 | INFO     | -- intersect: 6475809171.579469
[2025-10-18 11:29:42] 2025-10-18 15:28:41,718 | INFO     | intersect: 6475809171.579469
[2025-10-18 11:29:42] 2025-10-18 15:28:41,718 | INFO     | chi2: 0.9260860483263225
[2025-10-18 11:29:42] 2025-10-18 15:28:41,719 | INFO     | current chi2=0.9260860483263225 (change=58.60199426393425 %)
[2025-10-18 11:29:42] 2025-10-18 15:28:41,719 | INFO     | sum of square deviations: 605592750.0
[2025-10-18 11:29:42] 2025-10-18 15:28:41,719 | INFO     | sum of deviations: -9871493726.0
[2025-10-18 11:29:42] 2025-10-18 15:28:41,720 | INFO     | mean x: 1760797506.0
[2025-10-18 11:29:42] 2025-10-18 15:28:41,720 | INFO     | mean y: 2524441.384
[2025-10-18 11:29:42] 2025-10-18 15:28:41,720 | INFO     | -- intersect: 28704488811.39247
[2025-10-18 11:29:42] 2025-10-18 15:28:41,720 | INFO     | intersect: 28704488811.39247
[2025-10-18 11:29:42] 2025-10-18 15:28:41,720 | INFO     | chi2: 0.8090844358071535
[2025-10-18 11:29:42] 2025-10-18 15:28:41,720 | INFO     | current chi2=0.8090844358071535 (change=12.63398932859654 %)
[2025-10-18 11:29:42] 2025-10-18 15:28:41,720 | INFO     | left removable region: 20
[2025-10-18 11:29:42] 2025-10-18 15:28:41,721 | INFO     | sum of square deviations: 348769330.0
[2025-10-18 11:29:42] 2025-10-18 15:28:41,721 | INFO     | sum of deviations: -2347600006.000001
[2025-10-18 11:29:42] 2025-10-18 15:28:41,721 | INFO     | mean x: 1760797475.5
[2025-10-18 11:29:42] 2025-10-18 15:28:41,721 | INFO     | mean y: 2544945.423076923
[2025-10-18 11:29:42] 2025-10-18 15:28:41,722 | INFO     | -- intersect: 11854642617.109364
[2025-10-18 11:29:42] 2025-10-18 15:28:41,722 | INFO     | intersect: 11854642617.109364
[2025-10-18 11:29:42] 2025-10-18 15:28:41,722 | INFO     | chi2: 0.0034707623696264987
[2025-10-18 11:29:42] 2025-10-18 15:28:41,722 | INFO     | -- intersect: 11854642617.109364
[2025-10-18 11:29:42] 2025-10-18 15:28:41,722 | INFO     | current memory leak: -6.73 B/s (using 104 data points, chi2=0.00)
[2025-10-18 11:29:42] 2025-10-18 15:28:41,723 | INFO     | could have reported an average CPU frequency of 2005 MHz (8 samples)
[2025-10-18 11:29:42] 2025-10-18 15:28:41,723 | INFO     | ..............................
[2025-10-18 11:29:42] 2025-10-18 15:28:41,723 | INFO     | . Timing measurements:
[2025-10-18 11:29:42] 2025-10-18 15:28:41,723 | INFO     | . get job = 0 s
[2025-10-18 11:29:42] 2025-10-18 15:28:41,723 | INFO     | . initial setup = 2 s
[2025-10-18 11:29:42] 2025-10-18 15:28:41,723 | INFO     | . payload setup = 8 s
[2025-10-18 11:29:42] 2025-10-18 15:28:41,723 | INFO     | . stage-in = 0 s
[2025-10-18 11:29:42] 2025-10-18 15:28:41,723 | INFO     | . payload execution = 8201 s
[2025-10-18 11:29:42] 2025-10-18 15:28:41,724 | INFO     | . stage-out = 0 s
[2025-10-18 11:29:42] 2025-10-18 15:28:41,724 | INFO     | . log creation = 0 s
[2025-10-18 11:29:42] 2025-10-18 15:28:41,724 | INFO     | ..............................
[2025-10-18 11:29:42] 2025-10-18 15:28:41,961 | INFO     | 
[2025-10-18 11:29:42] 2025-10-18 15:28:41,962 | INFO     | job summary report
[2025-10-18 11:29:42] 2025-10-18 15:28:41,962 | INFO     | --------------------------------------------------
[2025-10-18 11:29:42] 2025-10-18 15:28:41,962 | INFO     | PanDA job id: 6848027338
[2025-10-18 11:29:42] 2025-10-18 15:28:41,962 | INFO     | task id: 46771637
[2025-10-18 11:29:42] 2025-10-18 15:28:41,962 | INFO     | errors: (none)
[2025-10-18 11:29:42] 2025-10-18 15:28:41,962 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 11:29:42] 2025-10-18 15:28:41,963 | INFO     | pilot state: finished 
[2025-10-18 11:29:42] 2025-10-18 15:28:41,963 | INFO     | transexitcode: 0
[2025-10-18 11:29:42] 2025-10-18 15:28:41,963 | INFO     | exeerrorcode: 0
[2025-10-18 11:29:42] 2025-10-18 15:28:41,963 | INFO     | exeerrordiag: 
[2025-10-18 11:29:42] 2025-10-18 15:28:41,963 | INFO     | exitcode: 0
[2025-10-18 11:29:42] 2025-10-18 15:28:41,963 | INFO     | exitmsg: OK
[2025-10-18 11:29:42] 2025-10-18 15:28:41,964 | INFO     | cpuconsumptiontime: 59130 s
[2025-10-18 11:29:42] 2025-10-18 15:28:41,964 | INFO     | nevents: 400
[2025-10-18 11:29:42] 2025-10-18 15:28:41,964 | INFO     | neventsw: 0
[2025-10-18 11:29:42] 2025-10-18 15:28:41,964 | INFO     | pid: 28962
[2025-10-18 11:29:42] 2025-10-18 15:28:41,964 | INFO     | pgrp: 28962
[2025-10-18 11:29:42] 2025-10-18 15:28:41,964 | INFO     | corecount: 8
[2025-10-18 11:29:42] 2025-10-18 15:28:41,965 | INFO     | event service: False
[2025-10-18 11:29:42] 2025-10-18 15:28:41,965 | INFO     | sizes: {0: 2348757, 1: 2348956, 6: 2349218, 11: 2349246, 8213: 2377043, 8215: 2386041, 8216: 2386225, 8222: 2386419}
[2025-10-18 11:29:42] 2025-10-18 15:28:41,965 | INFO     | --------------------------------------------------
[2025-10-18 11:29:42] 2025-10-18 15:28:41,965 | INFO     | 
[2025-10-18 11:29:42] 2025-10-18 15:28:41,966 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 11:29:42] 2025-10-18 15:28:41,993 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,993 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,994 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,994 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,994 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,994 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,994 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,995 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,995 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,995 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,995 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,995 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,996 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,996 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,996 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,996 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,996 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,997 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 11:29:42] 2025-10-18 15:28:41,997 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,997 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 11:29:42] 2025-10-18 15:28:41,997 | INFO     | job 6848027338 has completed (purged errors)
[2025-10-18 11:29:42] 2025-10-18 15:28:41,997 | INFO     | overall cleanup function is called
[2025-10-18 11:29:42] 2025-10-18 15:28:43,005 | INFO     | --- collectZombieJob: --- 10, [28962]
[2025-10-18 11:29:42] 2025-10-18 15:28:43,005 | INFO     | zombie collector waiting for pid 28962
[2025-10-18 11:29:42] 2025-10-18 15:28:43,012 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 11:29:42] 2025-10-18 15:28:43,012 | INFO     | collected zombie processes
[2025-10-18 11:29:42] 2025-10-18 15:28:43,012 | INFO     | will attempt to kill all subprocesses of pid=28962
[2025-10-18 11:29:42] 2025-10-18 15:28:43,083 | INFO     | process IDs to be killed: [28962] (in reverse order)
[2025-10-18 11:29:42] 2025-10-18 15:28:43,136 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 11:29:42] 2025-10-18 15:28:43,137 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 11:29:42] 2025-10-18 15:28:43,140 | INFO     | did not find any defunct processes belonging to 28962
[2025-10-18 11:29:42] 2025-10-18 15:28:43,144 | INFO     | did not find any defunct processes belonging to 28962
[2025-10-18 11:29:42] 2025-10-18 15:28:43,144 | INFO     | ready for new job
[2025-10-18 11:29:42] 2025-10-18 15:28:43,144 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 11:29:42] 2025-10-18 15:28:43,146 | INFO     | ***************************************
[2025-10-18 11:29:42] 2025-10-18 15:28:43,146 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 11:29:42] 2025-10-18 15:28:43,147 | INFO     | ***************************************
[2025-10-18 11:29:42] 2025-10-18 15:28:43,147 | INFO     | 
[2025-10-18 11:29:42] 2025-10-18 15:28:43,147 | INFO     | architecture information:
[2025-10-18 11:29:42] 2025-10-18 15:28:43,148 | INFO     | executing command: cat /etc/os-release
[2025-10-18 11:29:42] 2025-10-18 15:28:43,168 | INFO     | cat /etc/os-release:
[2025-10-18 11:29:42] NAME="CentOS Linux"
[2025-10-18 11:29:42] VERSION="7 (Core)"
[2025-10-18 11:29:42] ID="centos"
[2025-10-18 11:29:42] ID_LIKE="rhel fedora"
[2025-10-18 11:29:42] VERSION_ID="7"
[2025-10-18 11:29:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 11:29:42] ANSI_COLOR="0;31"
[2025-10-18 11:29:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 11:29:42] HOME_URL="https://www.centos.org/"
[2025-10-18 11:29:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 11:29:42] 
[2025-10-18 11:29:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 11:29:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 11:29:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 11:29:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 11:29:42] 
[2025-10-18 11:29:42] 2025-10-18 15:28:43,168 | INFO     | ***************************************
[2025-10-18 11:29:42] 2025-10-18 15:28:43,671 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 11:29:42] 2025-10-18 15:28:43,692 | INFO     | sufficient remaining disk space (18561892352 B)
[2025-10-18 11:29:42] 2025-10-18 15:28:43,692 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 11:29:42] 2025-10-18 15:28:43,693 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 11:29:42] 2025-10-18 15:28:43,693 | INFO     | update_server=False
[2025-10-18 11:29:42] 2025-10-18 15:28:43,693 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 11:29:42] 2025-10-18 15:28:43,694 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 11:29:42] 2025-10-18 15:28:43,694 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 11:29:42] 2025-10-18 15:28:43,694 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 11:29:42] 2025-10-18 15:28:43,695 | INFO     | aborting loop
[2025-10-18 11:29:42] 2025-10-18 15:28:44,204 | INFO     | all data control threads have been joined
[2025-10-18 11:29:42] 2025-10-18 15:28:44,663 | INFO     | all job control threads have been joined
[2025-10-18 11:29:42] 2025-10-18 15:28:44,697 | INFO     | [job] queue monitor thread has finished
[2025-10-18 11:29:42] 2025-10-18 15:28:44,699 | INFO     | [job] retrieve thread has finished
[2025-10-18 11:29:42] 2025-10-18 15:28:44,701 | INFO     | [job] job monitor thread has finished
[2025-10-18 11:29:42] 2025-10-18 15:28:44,720 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 11:29:42] 2025-10-18 15:28:44,758 | INFO     | all payload control threads have been joined
[2025-10-18 11:29:42] 2025-10-18 15:28:45,013 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 11:29:42] 2025-10-18 15:28:45,176 | INFO     | [payload] validate_post thread has finished
[2025-10-18 11:29:42] 2025-10-18 15:28:45,209 | INFO     | [data] control thread has finished
[2025-10-18 11:29:42] 2025-10-18 15:28:45,668 | INFO     | [job] control thread has finished
[2025-10-18 11:29:42] 2025-10-18 15:28:45,700 | INFO     | [data] copytool_out thread has finished
[2025-10-18 11:29:42] 2025-10-18 15:28:45,764 | INFO     | [payload] control thread has finished
[2025-10-18 11:29:42] 2025-10-18 15:28:45,859 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 11:29:42] 2025-10-18 15:28:46,075 | INFO     | [job] validate thread has finished
[2025-10-18 11:29:42] 2025-10-18 15:28:46,163 | INFO     | [data] copytool_in thread has finished
[2025-10-18 11:29:42] 2025-10-18 15:28:46,278 | INFO     | [payload] failed_post thread has finished
[2025-10-18 11:29:42] 2025-10-18 15:28:46,443 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 11:29:42] 2025-10-18 15:28:50,449 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 11:29:42] 2025-10-18 15:28:54,370 | INFO     | job.realtimelogging is not enabled
[2025-10-18 11:29:42] 2025-10-18 15:28:55,376 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 11:29:42] 2025-10-18 15:29:14,400 | INFO     | PID=22423 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 11:29:42] 2025-10-18 15:29:14,401 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 11:29:42] 2025-10-18 15:29:14,401 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 11:29:42] 2025-10-18 15:29:14,401 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 11:29:42] 2025-10-18 15:29:35,848 | INFO     | [monitor] cgroup control has ended
[2025-10-18 11:29:42] 2025-10-18 15:29:37,195 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139687476135744)>', '<ExcThread(monitor, started 139686756476672)>']
[2025-10-18 11:29:42] 2025-10-18 15:29:37,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 11:29:42] 2025-10-18 15:29:37,508 | INFO     | [monitor] control thread has ended
[2025-10-18 11:29:42] 2025-10-18 15:29:42,221 | INFO     | all workflow threads have been joined
[2025-10-18 11:29:42] 2025-10-18 15:29:42,221 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 11:29:42] 2025-10-18 15:29:42,221 | INFO     | traces error code: 0
[2025-10-18 11:29:42] 2025-10-18 15:29:42,222 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 11:29:42] 2025-10-18 15:29:42,336 [wrapper] ==== pilot stdout END ====
[2025-10-18 11:29:42] 2025-10-18 15:29:42,342 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 11:29:42] 2025-10-18 15:29:42,347 [wrapper] pilotpid: 22423
[2025-10-18 11:29:42] 2025-10-18 15:29:42,352 [wrapper] Pilot exit status: 0
[2025-10-18 11:29:42] 2025-10-18 15:29:42,372 [wrapper] pandaids: 6848027338
[2025-10-18 11:29:42] 2025-10-18 15:29:42,423 [wrapper] cleanup supervisor_pilot  7338 22424
[2025-10-18 11:29:42] 2025-10-18 15:29:42,428 [wrapper] Test setup, not cleaning
[2025-10-18 11:29:42] 2025-10-18 15:29:42,433 [wrapper] apfmon messages muted
[2025-10-18 11:29:42] 2025-10-18 15:29:42,438 [wrapper] ==== wrapper stdout END ====
[2025-10-18 11:29:42] 2025-10-18 15:29:42,443 [wrapper] ==== wrapper stderr END ====
[2025-10-18 11:29:42]  *** Error codes and diagnostics ***
[2025-10-18 11:29:42]     "exeErrorCode": 0,
[2025-10-18 11:29:42]     "exeErrorDiag": "",
[2025-10-18 11:29:42]     "pilotErrorCode": 0,
[2025-10-18 11:29:42]     "pilotErrorDiag": "",
[2025-10-18 11:29:42]  *** Listing of results directory ***
[2025-10-18 11:29:42] total 432144
[2025-10-18 11:29:42] -rw-r--r-- 1 boincer umatlas    557409 Oct 18 04:11 pilot3.tar.gz
[2025-10-18 11:29:42] -rw-r--r-- 1 boincer umatlas      5112 Oct 18 04:25 queuedata.json
[2025-10-18 11:29:42] -rwx------ 1 boincer umatlas     36292 Oct 18 04:26 runpilot2-wrapper.sh
[2025-10-18 11:29:42] -rw-r--r-- 1 boincer umatlas       100 Oct 18 09:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 11:29:42] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 09:11 run_atlas
[2025-10-18 11:29:42] -rw-r--r-- 1 boincer umatlas       105 Oct 18 09:11 job.xml
[2025-10-18 11:29:42] -rw-r--r-- 2 boincer umatlas 227833902 Oct 18 09:11 EVNT.46771634._001739.pool.root.1
[2025-10-18 11:29:42] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 09:11 start_atlas.sh
[2025-10-18 11:29:42] drwxrwx--x 2 boincer umatlas      4096 Oct 18 09:11 shared
[2025-10-18 11:29:42] -rw-r--r-- 2 boincer umatlas    569680 Oct 18 09:11 input.tar.gz
[2025-10-18 11:29:42] -rw-r--r-- 1 boincer umatlas         0 Oct 18 09:11 boinc_lockfile
[2025-10-18 11:29:42] -rw-r--r-- 1 boincer umatlas      2557 Oct 18 09:11 pandaJob.out
[2025-10-18 11:29:42] -rw------- 1 boincer umatlas    976750 Oct 18 09:11 agis_schedconf.cvmfs.json
[2025-10-18 11:29:42] -rw------- 1 boincer umatlas   1560740 Oct 18 09:11 agis_ddmendpoints.agis.ALL.json
[2025-10-18 11:29:42] drwx------ 5 boincer umatlas      4096 Oct 18 09:11 pilot3
[2025-10-18 11:29:42] -rw-r--r-- 1 boincer umatlas      5909 Oct 18 11:27 init_data.xml
[2025-10-18 11:29:42] -rw------- 1 boincer umatlas 207706105 Oct 18 11:27 HITS.46771637._039848.pool.root.1
[2025-10-18 11:29:42] -rw-r--r-- 1 boincer umatlas       529 Oct 18 11:28 boinc_task_state.xml
[2025-10-18 11:29:42] -rw------- 1 boincer umatlas      1050 Oct 18 11:28 memory_monitor_summary.json
[2025-10-18 11:29:42] -rw------- 1 boincer umatlas    375352 Oct 18 11:28 log.46771637._039848.job.log.tgz.1
[2025-10-18 11:29:42] -rw------- 1 boincer umatlas      7847 Oct 18 11:28 heartbeat.json
[2025-10-18 11:29:42] -rw------- 1 boincer umatlas        95 Oct 18 11:29 pilot_heartbeat.json
[2025-10-18 11:29:42] -rw-r--r-- 1 boincer umatlas        27 Oct 18 11:29 wrapper_checkpoint.txt
[2025-10-18 11:29:42] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 11:29 boinc_mmap_file
[2025-10-18 11:29:42] -rw------- 1 boincer umatlas      4818 Oct 18 11:29 pilotlog.txt
[2025-10-18 11:29:42] -rw------- 1 boincer umatlas   1162844 Oct 18 11:29 log.46771637._039848.job.log.1
[2025-10-18 11:29:42] -rw------- 1 boincer umatlas       357 Oct 18 11:29 output.list
[2025-10-18 11:29:42] -rw-r--r-- 1 boincer umatlas       620 Oct 18 11:29 runtime_log
[2025-10-18 11:29:42] -rw------- 1 boincer umatlas   1556480 Oct 18 11:29 result.tar.gz
[2025-10-18 11:29:42] -rw-r--r-- 1 boincer umatlas      8698 Oct 18 11:29 runtime_log.err
[2025-10-18 11:29:42] -rw------- 1 boincer umatlas       660 Oct 18 11:29 G9wKDmYRHU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJbwNDmGyUBBo.diag
[2025-10-18 11:29:42] -rw-r--r-- 1 boincer umatlas     20831 Oct 18 11:29 stderr.txt
[2025-10-18 11:29:42] HITS file was successfully produced:
[2025-10-18 11:29:42] -rw------- 1 boincer umatlas 207706105 Oct 18 11:27 shared/HITS.pool.root.1
[2025-10-18 11:29:42]  *** Contents of shared directory: ***
[2025-10-18 11:29:42] total 427436
[2025-10-18 11:29:42] -rw-r--r-- 2 boincer umatlas 227833902 Oct 18 09:11 ATLAS.root_0
[2025-10-18 11:29:42] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 09:11 start_atlas.sh
[2025-10-18 11:29:42] -rw-r--r-- 2 boincer umatlas    569680 Oct 18 09:11 input.tar.gz
[2025-10-18 11:29:42] -rw------- 1 boincer umatlas 207706105 Oct 18 11:27 HITS.pool.root.1
[2025-10-18 11:29:42] -rw------- 1 boincer umatlas   1556480 Oct 18 11:29 result.tar.gz
11:29:44 (18752): run_atlas exited; CPU time 59128.995394
11:29:44 (18752): called boinc_finish(0)

</stderr_txt>
]]>

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