Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:44:00 (28829): wrapper (7.7.26015): starting
08:44:00 (28829): wrapper: running run_atlas (--nthreads 8)
[2025-10-18 08:44:00] Arguments: --nthreads 8
[2025-10-18 08:44:00] Threads: 8
[2025-10-18 08:44:00] Checking for CVMFS
[2025-10-18 08:44:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 08:44:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 08:44:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 08:44:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 08:44:01] 2.11.2.0 2932 210064 119000 151851 0 59 18792718 20275200 1 130560 1 77247045 99.972 10861197 14225 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 08:44:01] CVMFS is ok
[2025-10-18 08:44:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 08:44:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 08:44:01] Further information can be found at the LHC@home message board.
[2025-10-18 08:44:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 08:44:01] Checking for apptainer binary...
[2025-10-18 08:44:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 08:44:01] Running /usr/bin/apptainer --version
[2025-10-18 08:44:01] apptainer version 1.3.2-1.el7
[2025-10-18 08:44:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 08:44:03] c-204-17.aglt2.org
[2025-10-18 08:44:03] apptainer works
[2025-10-18 08:44:03] Set ATHENA_PROC_NUMBER=8
[2025-10-18 08:44:03] Set ATHENA_CORE_NUMBER=8
[2025-10-18 08:44:03] Starting ATLAS job with PandaID=6848033214
[2025-10-18 08:44:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:10:31 (4866): wrapper (7.7.26015): starting
10:10:31 (4866): wrapper: running run_atlas (--nthreads 8)
[2025-10-18 10:10:31] Arguments: --nthreads 8
[2025-10-18 10:10:31] Threads: 8
[2025-10-18 10:10:31] This job has been restarted, cleaning up previous attempt
[2025-10-18 10:10:31] Checking for CVMFS
[2025-10-18 10:10:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 10:10:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 10:10:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 10:10:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 10:10:31] 2.11.2.0 2932 210150 119212 151853 2 1 18870888 20275200 1 130560 1 77319035 99.972 10863863 14227 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 10:10:31] CVMFS is ok
[2025-10-18 10:10:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 10:10:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 10:10:31] Further information can be found at the LHC@home message board.
[2025-10-18 10:10:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 10:10:31] Checking for apptainer binary...
[2025-10-18 10:10:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 10:10:31] Running /usr/bin/apptainer --version
[2025-10-18 10:10:31] apptainer version 1.3.2-1.el7
[2025-10-18 10:10:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 10:10:33] c-204-17.aglt2.org
[2025-10-18 10:10:33] apptainer works
[2025-10-18 10:10:33] Set ATHENA_PROC_NUMBER=8
[2025-10-18 10:10:33] Set ATHENA_CORE_NUMBER=8
[2025-10-18 10:10:33] Starting ATLAS job with PandaID=6848033214
[2025-10-18 10:10:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 12:29:10]  *** The last 200 lines of the pilot log: ***
[2025-10-18 12:29:10] 2025-10-18 16:28:14,849 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 12:29:10] 2025-10-18 16:28:14,850 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 12:29:10] 2025-10-18 16:28:14,850 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 12:29:10] 2025-10-18 16:28:14,853 | INFO     | fitting pss+swap vs Time
[2025-10-18 12:29:10] 2025-10-18 16:28:14,854 | INFO     | sum of square deviations: 762879420.0
[2025-10-18 12:29:10] 2025-10-18 16:28:14,855 | INFO     | sum of deviations: 17743460033.999992
[2025-10-18 12:29:10] 2025-10-18 16:28:14,855 | INFO     | mean x: 1760800769.0
[2025-10-18 12:29:10] 2025-10-18 16:28:14,855 | INFO     | mean y: 2442998.5185185187
[2025-10-18 12:29:10] 2025-10-18 16:28:14,855 | INFO     | -- intersect: -40951208723.516335
[2025-10-18 12:29:10] 2025-10-18 16:28:14,855 | INFO     | intersect: -40951208723.516335
[2025-10-18 12:29:10] 2025-10-18 16:28:14,856 | INFO     | chi2: 2.217176580073521
[2025-10-18 12:29:10] 2025-10-18 16:28:14,856 | INFO     | sum of square deviations: 681212772.5
[2025-10-18 12:29:10] 2025-10-18 16:28:14,857 | INFO     | sum of deviations: 25654120258.5
[2025-10-18 12:29:10] 2025-10-18 16:28:14,857 | INFO     | mean x: 1760800616.5
[2025-10-18 12:29:10] 2025-10-18 16:28:14,857 | INFO     | mean y: 2457268.3
[2025-10-18 12:29:10] 2025-10-18 16:28:14,857 | INFO     | -- intersect: -66308382149.9846
[2025-10-18 12:29:10] 2025-10-18 16:28:14,858 | INFO     | intersect: -66308382149.9846
[2025-10-18 12:29:10] 2025-10-18 16:28:14,858 | INFO     | chi2: 1.4379810694856567
[2025-10-18 12:29:10] 2025-10-18 16:28:14,858 | INFO     | current chi2=1.4379810694856567 (change=35.14359287351061 %)
[2025-10-18 12:29:10] 2025-10-18 16:28:14,858 | INFO     | sum of square deviations: 605592750.0
[2025-10-18 12:29:10] 2025-10-18 16:28:14,859 | INFO     | sum of deviations: 24441195984.000008
[2025-10-18 12:29:10] 2025-10-18 16:28:14,859 | INFO     | mean x: 1760800464.0
[2025-10-18 12:29:10] 2025-10-18 16:28:14,859 | INFO     | mean y: 2454821.096
[2025-10-18 12:29:10] 2025-10-18 16:28:14,859 | INFO     | -- intersect: -71061918438.561
[2025-10-18 12:29:10] 2025-10-18 16:28:14,859 | INFO     | intersect: -71061918438.561
[2025-10-18 12:29:10] 2025-10-18 16:28:14,860 | INFO     | chi2: 1.4384822166270792
[2025-10-18 12:29:10] 2025-10-18 16:28:14,860 | INFO     | current chi2=1.4384822166270792 (change=-0.03485074679054828 %)
[2025-10-18 12:29:10] 2025-10-18 16:28:14,860 | INFO     | right removable region: 124
[2025-10-18 12:29:10] 2025-10-18 16:28:14,860 | INFO     | sum of square deviations: 681212772.5
[2025-10-18 12:29:10] 2025-10-18 16:28:14,861 | INFO     | sum of deviations: -3685492052.5
[2025-10-18 12:29:10] 2025-10-18 16:28:14,861 | INFO     | mean x: 1760800921.5
[2025-10-18 12:29:10] 2025-10-18 16:28:14,861 | INFO     | mean y: 2482461.9923076923
[2025-10-18 12:29:10] 2025-10-18 16:28:14,861 | INFO     | -- intersect: 9528753935.745283
[2025-10-18 12:29:10] 2025-10-18 16:28:14,861 | INFO     | intersect: 9528753935.745283
[2025-10-18 12:29:10] 2025-10-18 16:28:14,861 | INFO     | chi2: 0.8195308390859734
[2025-10-18 12:29:10] 2025-10-18 16:28:14,862 | INFO     | current chi2=0.8195308390859734 (change=63.03718673328229 %)
[2025-10-18 12:29:10] 2025-10-18 16:28:14,862 | INFO     | sum of square deviations: 605592750.0
[2025-10-18 12:29:10] 2025-10-18 16:28:14,862 | INFO     | sum of deviations: -4660971203.999999
[2025-10-18 12:29:10] 2025-10-18 16:28:14,863 | INFO     | mean x: 1760801074.0
[2025-10-18 12:29:10] 2025-10-18 16:28:14,863 | INFO     | mean y: 2484346.216
[2025-10-18 12:29:10] 2025-10-18 16:28:14,863 | INFO     | -- intersect: 13554567164.060617
[2025-10-18 12:29:10] 2025-10-18 16:28:14,863 | INFO     | intersect: 13554567164.060617
[2025-10-18 12:29:10] 2025-10-18 16:28:14,863 | INFO     | chi2: 0.8065818384614417
[2025-10-18 12:29:10] 2025-10-18 16:28:14,863 | INFO     | current chi2=0.8065818384614417 (change=1.5800504394653068 %)
[2025-10-18 12:29:10] 2025-10-18 16:28:14,864 | INFO     | left removable region: 20
[2025-10-18 12:29:10] 2025-10-18 16:28:14,864 | INFO     | sum of square deviations: 348769330.0
[2025-10-18 12:29:10] 2025-10-18 16:28:14,864 | INFO     | sum of deviations: 2015453664.0000002
[2025-10-18 12:29:10] 2025-10-18 16:28:14,864 | INFO     | mean x: 1760801043.5
[2025-10-18 12:29:10] 2025-10-18 16:28:14,864 | INFO     | mean y: 2503584.1153846155
[2025-10-18 12:29:10] 2025-10-18 16:28:14,865 | INFO     | -- intersect: -10172740078.213234
[2025-10-18 12:29:10] 2025-10-18 16:28:14,865 | INFO     | intersect: -10172740078.213234
[2025-10-18 12:29:10] 2025-10-18 16:28:14,865 | INFO     | chi2: 0.0001358426304656411
[2025-10-18 12:29:10] 2025-10-18 16:28:14,865 | INFO     | -- intersect: -10172740078.213234
[2025-10-18 12:29:10] 2025-10-18 16:28:14,865 | INFO     | current memory leak: 5.78 B/s (using 104 data points, chi2=0.00)
[2025-10-18 12:29:10] 2025-10-18 16:28:14,866 | INFO     | could have reported an average CPU frequency of 2001 MHz (8 samples)
[2025-10-18 12:29:10] 2025-10-18 16:28:14,866 | INFO     | ..............................
[2025-10-18 12:29:10] 2025-10-18 16:28:14,866 | INFO     | . Timing measurements:
[2025-10-18 12:29:10] 2025-10-18 16:28:14,866 | INFO     | . get job = 0 s
[2025-10-18 12:29:10] 2025-10-18 16:28:14,866 | INFO     | . initial setup = 1 s
[2025-10-18 12:29:10] 2025-10-18 16:28:14,866 | INFO     | . payload setup = 8 s
[2025-10-18 12:29:10] 2025-10-18 16:28:14,866 | INFO     | . stage-in = 0 s
[2025-10-18 12:29:10] 2025-10-18 16:28:14,866 | INFO     | . payload execution = 8204 s
[2025-10-18 12:29:10] 2025-10-18 16:28:14,867 | INFO     | . stage-out = 2 s
[2025-10-18 12:29:10] 2025-10-18 16:28:14,867 | INFO     | . log creation = 0 s
[2025-10-18 12:29:10] 2025-10-18 16:28:14,867 | INFO     | ..............................
[2025-10-18 12:29:10] 2025-10-18 16:28:14,958 | INFO     | 
[2025-10-18 12:29:10] 2025-10-18 16:28:14,958 | INFO     | job summary report
[2025-10-18 12:29:10] 2025-10-18 16:28:14,958 | INFO     | --------------------------------------------------
[2025-10-18 12:29:10] 2025-10-18 16:28:14,958 | INFO     | PanDA job id: 6848033214
[2025-10-18 12:29:10] 2025-10-18 16:28:14,959 | INFO     | task id: 46771637
[2025-10-18 12:29:10] 2025-10-18 16:28:14,959 | INFO     | errors: (none)
[2025-10-18 12:29:10] 2025-10-18 16:28:14,959 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 12:29:10] 2025-10-18 16:28:14,959 | INFO     | pilot state: finished 
[2025-10-18 12:29:10] 2025-10-18 16:28:14,959 | INFO     | transexitcode: 0
[2025-10-18 12:29:10] 2025-10-18 16:28:14,959 | INFO     | exeerrorcode: 0
[2025-10-18 12:29:10] 2025-10-18 16:28:14,959 | INFO     | exeerrordiag: 
[2025-10-18 12:29:10] 2025-10-18 16:28:14,960 | INFO     | exitcode: 0
[2025-10-18 12:29:10] 2025-10-18 16:28:14,960 | INFO     | exitmsg: OK
[2025-10-18 12:29:10] 2025-10-18 16:28:14,960 | INFO     | cpuconsumptiontime: 61666 s
[2025-10-18 12:29:10] 2025-10-18 16:28:14,960 | INFO     | nevents: 400
[2025-10-18 12:29:10] 2025-10-18 16:28:14,960 | INFO     | neventsw: 0
[2025-10-18 12:29:10] 2025-10-18 16:28:14,960 | INFO     | pid: 15067
[2025-10-18 12:29:10] 2025-10-18 16:28:14,960 | INFO     | pgrp: 15067
[2025-10-18 12:29:10] 2025-10-18 16:28:14,960 | INFO     | corecount: 8
[2025-10-18 12:29:10] 2025-10-18 16:28:14,961 | INFO     | event service: False
[2025-10-18 12:29:10] 2025-10-18 16:28:14,961 | INFO     | sizes: {0: 2348929, 1: 2348929, 6: 2349219, 11: 2349247, 8217: 2377021, 8220: 2386019, 8221: 2386231, 8227: 2386425}
[2025-10-18 12:29:10] 2025-10-18 16:28:14,961 | INFO     | --------------------------------------------------
[2025-10-18 12:29:10] 2025-10-18 16:28:14,961 | INFO     | 
[2025-10-18 12:29:10] 2025-10-18 16:28:14,961 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 12:29:10] 2025-10-18 16:28:14,986 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,987 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,987 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,987 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,987 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,987 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,987 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,988 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,988 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,988 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,988 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,988 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,988 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,989 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 12:29:10] 2025-10-18 16:28:14,989 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,990 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 12:29:10] 2025-10-18 16:28:14,990 | INFO     | job 6848033214 has completed (purged errors)
[2025-10-18 12:29:10] 2025-10-18 16:28:14,990 | INFO     | overall cleanup function is called
[2025-10-18 12:29:10] 2025-10-18 16:28:15,998 | INFO     | --- collectZombieJob: --- 10, [15067]
[2025-10-18 12:29:10] 2025-10-18 16:28:15,998 | INFO     | zombie collector waiting for pid 15067
[2025-10-18 12:29:10] 2025-10-18 16:28:15,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 12:29:10] 2025-10-18 16:28:15,999 | INFO     | collected zombie processes
[2025-10-18 12:29:10] 2025-10-18 16:28:15,999 | INFO     | will attempt to kill all subprocesses of pid=15067
[2025-10-18 12:29:10] 2025-10-18 16:28:16,090 | INFO     | process IDs to be killed: [15067] (in reverse order)
[2025-10-18 12:29:10] 2025-10-18 16:28:16,147 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 12:29:10] 2025-10-18 16:28:16,148 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 12:29:10] 2025-10-18 16:28:16,152 | INFO     | did not find any defunct processes belonging to 15067
[2025-10-18 12:29:10] 2025-10-18 16:28:16,156 | INFO     | did not find any defunct processes belonging to 15067
[2025-10-18 12:29:10] 2025-10-18 16:28:16,157 | INFO     | ready for new job
[2025-10-18 12:29:10] 2025-10-18 16:28:16,157 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 12:29:10] 2025-10-18 16:28:16,159 | INFO     | ***************************************
[2025-10-18 12:29:10] 2025-10-18 16:28:16,159 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 12:29:10] 2025-10-18 16:28:16,159 | INFO     | ***************************************
[2025-10-18 12:29:10] 2025-10-18 16:28:16,159 | INFO     | 
[2025-10-18 12:29:10] 2025-10-18 16:28:16,159 | INFO     | architecture information:
[2025-10-18 12:29:10] 2025-10-18 16:28:16,160 | INFO     | executing command: cat /etc/os-release
[2025-10-18 12:29:10] 2025-10-18 16:28:16,176 | INFO     | cat /etc/os-release:
[2025-10-18 12:29:10] NAME="CentOS Linux"
[2025-10-18 12:29:10] VERSION="7 (Core)"
[2025-10-18 12:29:10] ID="centos"
[2025-10-18 12:29:10] ID_LIKE="rhel fedora"
[2025-10-18 12:29:10] VERSION_ID="7"
[2025-10-18 12:29:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 12:29:10] ANSI_COLOR="0;31"
[2025-10-18 12:29:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 12:29:10] HOME_URL="https://www.centos.org/"
[2025-10-18 12:29:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 12:29:10] 
[2025-10-18 12:29:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 12:29:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 12:29:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 12:29:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 12:29:10] 
[2025-10-18 12:29:10] 2025-10-18 16:28:16,176 | INFO     | ***************************************
[2025-10-18 12:29:10] 2025-10-18 16:28:16,679 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 12:29:10] 2025-10-18 16:28:16,698 | INFO     | sufficient remaining disk space (18518900736 B)
[2025-10-18 12:29:10] 2025-10-18 16:28:16,699 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 12:29:10] 2025-10-18 16:28:16,699 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 12:29:10] 2025-10-18 16:28:16,699 | INFO     | update_server=False
[2025-10-18 12:29:10] 2025-10-18 16:28:16,700 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 12:29:10] 2025-10-18 16:28:16,700 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 12:29:10] 2025-10-18 16:28:16,700 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 12:29:10] 2025-10-18 16:28:16,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 12:29:10] 2025-10-18 16:28:16,701 | INFO     | aborting loop
[2025-10-18 12:29:10] 2025-10-18 16:28:17,286 | INFO     | all payload control threads have been joined
[2025-10-18 12:29:10] 2025-10-18 16:28:17,436 | INFO     | all data control threads have been joined
[2025-10-18 12:29:10] 2025-10-18 16:28:17,705 | INFO     | [job] retrieve thread has finished
[2025-10-18 12:29:10] 2025-10-18 16:28:17,706 | INFO     | [job] queue monitor thread has finished
[2025-10-18 12:29:10] 2025-10-18 16:28:17,707 | INFO     | [job] job monitor thread has finished
[2025-10-18 12:29:10] 2025-10-18 16:28:17,735 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 12:29:10] 2025-10-18 16:28:17,807 | INFO     | all job control threads have been joined
[2025-10-18 12:29:10] 2025-10-18 16:28:17,922 | INFO     | [payload] failed_post thread has finished
[2025-10-18 12:29:10] 2025-10-18 16:28:18,292 | INFO     | [payload] control thread has finished
[2025-10-18 12:29:10] 2025-10-18 16:28:18,301 | INFO     | [job] validate thread has finished
[2025-10-18 12:29:10] 2025-10-18 16:28:18,343 | INFO     | [data] copytool_in thread has finished
[2025-10-18 12:29:10] 2025-10-18 16:28:18,355 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 12:29:10] 2025-10-18 16:28:18,388 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 12:29:10] 2025-10-18 16:28:18,442 | INFO     | [data] control thread has finished
[2025-10-18 12:29:10] 2025-10-18 16:28:18,625 | INFO     | [payload] validate_post thread has finished
[2025-10-18 12:29:10] 2025-10-18 16:28:18,707 | INFO     | [data] copytool_out thread has finished
[2025-10-18 12:29:10] 2025-10-18 16:28:18,813 | INFO     | [job] control thread has finished
[2025-10-18 12:29:10] 2025-10-18 16:28:19,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 12:29:10] 2025-10-18 16:28:23,789 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 12:29:10] 2025-10-18 16:28:27,744 | INFO     | job.realtimelogging is not enabled
[2025-10-18 12:29:10] 2025-10-18 16:28:28,749 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 12:29:10] 2025-10-18 16:28:46,567 | INFO     | PID=8579 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-18 12:29:10] 2025-10-18 16:28:46,567 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 12:29:10] 2025-10-18 16:28:46,567 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 12:29:10] 2025-10-18 16:28:46,567 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 12:29:10] 2025-10-18 16:29:03,572 | INFO     | [monitor] cgroup control has ended
[2025-10-18 12:29:10] 2025-10-18 16:29:05,264 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140410993719104)>', '<ExcThread(monitor, started 140410701723392)>']
[2025-10-18 12:29:10] 2025-10-18 16:29:05,637 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 12:29:10] 2025-10-18 16:29:05,638 | INFO     | [monitor] control thread has ended
[2025-10-18 12:29:10] 2025-10-18 16:29:10,284 | INFO     | all workflow threads have been joined
[2025-10-18 12:29:10] 2025-10-18 16:29:10,284 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 12:29:10] 2025-10-18 16:29:10,284 | INFO     | traces error code: 0
[2025-10-18 12:29:10] 2025-10-18 16:29:10,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 12:29:10] 2025-10-18 16:29:10,404 [wrapper] ==== pilot stdout END ====
[2025-10-18 12:29:10] 2025-10-18 16:29:10,409 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 12:29:10] 2025-10-18 16:29:10,413 [wrapper] pilotpid: 8579
[2025-10-18 12:29:10] 2025-10-18 16:29:10,418 [wrapper] Pilot exit status: 0
[2025-10-18 12:29:10] 2025-10-18 16:29:10,437 [wrapper] pandaids: 6848033214 6848033214
[2025-10-18 12:29:10] 2025-10-18 16:29:10,491 [wrapper] cleanup supervisor_pilot 14741 8580
[2025-10-18 12:29:10] 2025-10-18 16:29:10,496 [wrapper] Test setup, not cleaning
[2025-10-18 12:29:10] 2025-10-18 16:29:10,501 [wrapper] apfmon messages muted
[2025-10-18 12:29:10] 2025-10-18 16:29:10,506 [wrapper] ==== wrapper stdout END ====
[2025-10-18 12:29:10] 2025-10-18 16:29:10,510 [wrapper] ==== wrapper stderr END ====
[2025-10-18 12:29:10]  *** Error codes and diagnostics ***
[2025-10-18 12:29:10]     "exeErrorCode": 0,
[2025-10-18 12:29:10]     "exeErrorDiag": "",
[2025-10-18 12:29:10]     "pilotErrorCode": 0,
[2025-10-18 12:29:10]     "pilotErrorDiag": "",
[2025-10-18 12:29:10]  *** Listing of results directory ***
[2025-10-18 12:29:10] total 655656
[2025-10-18 12:29:10] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-18 12:29:10] -rw-r--r-- 1 boincer umatlas    557409 Oct 18 06:29 pilot3.tar.gz
[2025-10-18 12:29:10] -rw-r--r-- 1 boincer umatlas      5112 Oct 18 06:38 queuedata.json
[2025-10-18 12:29:10] -rwx------ 1 boincer umatlas     36292 Oct 18 06:38 runpilot2-wrapper.sh
[2025-10-18 12:29:10] -rw-r--r-- 1 boincer umatlas       100 Oct 18 08:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 12:29:10] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 08:43 run_atlas
[2025-10-18 12:29:10] -rw-r--r-- 1 boincer umatlas       105 Oct 18 08:43 job.xml
[2025-10-18 12:29:10] -rw-r--r-- 3 boincer umatlas 227452083 Oct 18 08:44 EVNT.46771634._001767.pool.root.1
[2025-10-18 12:29:10] -rw-r--r-- 3 boincer umatlas 227452083 Oct 18 08:44 ATLAS.root_0
[2025-10-18 12:29:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 08:44 start_atlas.sh
[2025-10-18 12:29:10] drwxrwx--x 2 boincer umatlas      4096 Oct 18 08:44 shared
[2025-10-18 12:29:10] -rw-r--r-- 2 boincer umatlas    569681 Oct 18 08:44 input.tar.gz
[2025-10-18 12:29:10] -rw-r--r-- 1 boincer umatlas         0 Oct 18 08:44 boinc_lockfile
[2025-10-18 12:29:10] -rw-r--r-- 1 boincer umatlas      2558 Oct 18 10:10 pandaJob.out
[2025-10-18 12:29:10] -rw------- 1 boincer umatlas    976742 Oct 18 10:10 agis_schedconf.cvmfs.json
[2025-10-18 12:29:10] -rw-r--r-- 1 boincer umatlas      5910 Oct 18 12:20 init_data.xml
[2025-10-18 12:29:10] -rw------- 1 boincer umatlas 209510204 Oct 18 12:27 HITS.46771637._041734.pool.root.1
[2025-10-18 12:29:10] -rw-r--r-- 1 boincer umatlas       531 Oct 18 12:27 boinc_task_state.xml
[2025-10-18 12:29:10] -rw------- 1 boincer umatlas        96 Oct 18 12:27 pilot_heartbeat.json
[2025-10-18 12:29:10] -rw------- 1 boincer umatlas      1049 Oct 18 12:28 memory_monitor_summary.json
[2025-10-18 12:29:10] -rw------- 1 boincer umatlas   1560740 Oct 18 12:28 agis_ddmendpoints.agis.ALL.json
[2025-10-18 12:29:10] -rw------- 1 boincer umatlas    384673 Oct 18 12:28 log.46771637._041734.job.log.tgz.1
[2025-10-18 12:29:10] -rw------- 1 boincer umatlas      7846 Oct 18 12:28 heartbeat.json
[2025-10-18 12:29:10] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 12:28 boinc_mmap_file
[2025-10-18 12:29:10] -rw-r--r-- 1 boincer umatlas        28 Oct 18 12:28 wrapper_checkpoint.txt
[2025-10-18 12:29:10] -rw------- 1 boincer umatlas      4817 Oct 18 12:29 pilotlog.txt
[2025-10-18 12:29:10] -rw------- 1 boincer umatlas   1154780 Oct 18 12:29 log.46771637._041734.job.log.1
[2025-10-18 12:29:10] -rw------- 1 boincer umatlas       357 Oct 18 12:29 output.list
[2025-10-18 12:29:10] -rw-r--r-- 1 boincer umatlas       620 Oct 18 12:29 runtime_log
[2025-10-18 12:29:10] -rw------- 1 boincer umatlas   1556480 Oct 18 12:29 result.tar.gz
[2025-10-18 12:29:10] -rw-r--r-- 1 boincer umatlas      8788 Oct 18 12:29 runtime_log.err
[2025-10-18 12:29:10] -rw------- 1 boincer umatlas       786 Oct 18 12:29 CmVNDmoVJU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLswNDm25a4gm.diag
[2025-10-18 12:29:10] -rw-r--r-- 1 boincer umatlas     22990 Oct 18 12:29 stderr.txt
[2025-10-18 12:29:10] HITS file was successfully produced:
[2025-10-18 12:29:10] -rw------- 1 boincer umatlas 209510204 Oct 18 12:27 shared/HITS.pool.root.1
[2025-10-18 12:29:10]  *** Contents of shared directory: ***
[2025-10-18 12:29:10] total 428824
[2025-10-18 12:29:10] -rw-r--r-- 3 boincer umatlas 227452083 Oct 18 08:44 ATLAS.root_0
[2025-10-18 12:29:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 08:44 start_atlas.sh
[2025-10-18 12:29:10] -rw-r--r-- 2 boincer umatlas    569681 Oct 18 08:44 input.tar.gz
[2025-10-18 12:29:10] -rw------- 1 boincer umatlas 209510204 Oct 18 12:27 HITS.pool.root.1
[2025-10-18 12:29:10] -rw------- 1 boincer umatlas   1556480 Oct 18 12:29 result.tar.gz
12:29:12 (4866): run_atlas exited; CPU time 61610.278354
12:29:12 (4866): called boinc_finish(0)

</stderr_txt>
]]>

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