Stderr output

<core_client_version>7.14.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-18 13:16:22 (642240): vboxwrapper version 26210
2025-10-18 13:16:22 (642240): BOINC client version: 7.14.2
2025-10-18 13:16:22 (642240): Detected: VirtualBox VboxManage Interface (Version: 6.1.40)
2025-10-18 13:16:23 (642240): Successfully copied 'init_data.xml' to the shared directory.
2025-10-18 13:16:23 (642240): Create VM. (boinc_b548b3897f566c40, slot#10)
2025-10-18 13:16:24 (642240): Setting Memory Size for VM. (4200MB)
2025-10-18 13:16:24 (642240): Setting CPU Count for VM. (2)
2025-10-18 13:16:24 (642240): Setting Chipset Options for VM.
2025-10-18 13:16:24 (642240): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-18 13:16:25 (642240): Setting Boot Options for VM.
2025-10-18 13:16:25 (642240): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-18 13:16:25 (642240): Enabling VM Network Access.
2025-10-18 13:16:26 (642240): Disabling USB Support for VM.
2025-10-18 13:16:26 (642240): Disabling COM Port Support for VM.
2025-10-18 13:16:26 (642240): Disabling LPT Port Support for VM.
2025-10-18 13:16:26 (642240): Disabling Audio Support for VM.
2025-10-18 13:16:27 (642240): Disabling Clipboard Support for VM.
2025-10-18 13:16:27 (642240): Disabling Drag and Drop Support for VM.
2025-10-18 13:16:27 (642240): Adding storage controller(s) to VM.
2025-10-18 13:16:27 (642240): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-18 13:16:28 (642240): Adding VirtualBox Guest Additions to VM.
2025-10-18 13:16:28 (642240): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-18 13:16:28 (642240): forwarding host port 64093 to guest port 80
2025-10-18 13:16:29 (642240): Enabling remote desktop for VM.
2025-10-18 13:16:29 (642240): Enabling shared directory for VM.
2025-10-18 13:16:30 (642240): Starting VM using VBoxManage interface. (boinc_b548b3897f566c40, slot#10)
2025-10-18 13:16:39 (642240): Successfully started VM. (PID = '637136')
2025-10-18 13:16:39 (642240): Reporting VM Process ID to BOINC.
2025-10-18 13:16:39 (642240): Guest Log: BIOS: VirtualBox 6.1.40
2025-10-18 13:16:39 (642240): Guest Log: CPUID EDX: 0x178bfbff
2025-10-18 13:16:39 (642240): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-18 13:16:39 (642240): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-18 13:16:39 (642240): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-18 13:16:39 (642240): Detected: Web Application Enabled (http://localhost:64093)
2025-10-18 13:16:39 (642240): Detected: Remote Desktop Enabled (localhost:64094)
2025-10-18 13:16:39 (642240): Preference change detected
2025-10-18 13:16:39 (642240): Setting CPU throttle for VM. (100%)
2025-10-18 13:16:39 (642240): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-18 13:16:41 (642240): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-18 13:16:41 (642240): Guest Log: BIOS: Booting from Hard Disk...
2025-10-18 13:16:44 (642240): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-18 13:16:44 (642240): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-18 13:16:44 (642240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-18 13:16:48 (642240): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-18 13:16:48 (642240): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-18 13:16:56 (642240): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-18 13:16:56 (642240): Guest Log: 00:00:00.000207 main     Log opened 2025-10-18T13:16:54.715797000Z
2025-10-18 13:16:56 (642240): Guest Log: 00:00:00.000369 main     OS Product: Linux
2025-10-18 13:16:56 (642240): Guest Log: 00:00:00.000411 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-18 13:16:56 (642240): Guest Log: 00:00:00.000517 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-18 13:16:56 (642240): Guest Log: 00:00:00.000558 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-18 13:16:56 (642240): Guest Log: 00:00:00.000560 main     Process ID: 1269
2025-10-18 13:16:56 (642240): Guest Log: 00:00:00.000560 main     Package type: LINUX_64BITS_GENERIC
2025-10-18 13:16:56 (642240): Guest Log: 00:00:00.003091 main     5.2.32 r132073 started. Verbose level = 0
2025-10-18 13:16:56 (642240): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-18 13:16:56 (642240): Guest Log: [INFO] Mounting shared directory
2025-10-18 13:16:56 (642240): Guest Log: [INFO] Checking for init_data.xml
2025-10-18 13:16:58 (642240): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-18 13:16:58 (642240): Guest Log: [INFO] Detected branch: prod
2025-10-18 13:16:58 (642240): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-18 13:16:58 (642240): Guest Log: Copying input files
2025-10-18 13:17:02 (642240): Guest Log: Copied input files into RunAtlas.
2025-10-18 13:17:02 (642240): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-18 13:17:02 (642240): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-18 13:17:02 (642240): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-18 13:17:02 (642240): Guest Log: Further information can be found at the LHC@home message board.
2025-10-18 13:17:06 (642240): Guest Log: 00:00:10.011885 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 213 386 000ns (GuestNow=1 760 807 825 939 406 000 ns GuestLast=1 760 793 414 726 020 000 ns fSetTimeLastLoop=true )
2025-10-18 13:17:10 (642240): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-18 13:17:11 (642240): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-18 13:17:11 (642240): Guest Log: 2.6.3.0 1545 0 30068 151859 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-18 13:17:12 (642240): Guest Log: copied the webapp to /var/www
2025-10-18 13:17:12 (642240): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-18 13:17:12 (642240): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-18 13:17:12 (642240): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-18 13:17:12 (642240): Guest Log:  *** Starting ATLAS job. (PandaID=6848025972 taskID=46771637) ***
2025-10-18 14:57:21 (642240): Status Report: Elapsed Time: '6000.967588'
2025-10-18 14:57:21 (642240): Status Report: CPU Time: '10914.234375'
2025-10-18 16:37:47 (642240): Status Report: Elapsed Time: '12000.967588'
2025-10-18 16:37:47 (642240): Status Report: CPU Time: '22823.468750'
2025-10-18 18:18:09 (642240): Status Report: Elapsed Time: '18000.967588'
2025-10-18 18:18:09 (642240): Status Report: CPU Time: '34756.375000'
2025-10-18 19:58:29 (642240): Status Report: Elapsed Time: '24000.967588'
2025-10-18 19:58:29 (642240): Status Report: CPU Time: '46693.703125'
2025-10-18 21:19:41 (642240): Guest Log:  *** Job finished ***
2025-10-18 21:19:41 (642240): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:35,168 | INFO     | all workflow threads have been joined
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:35,168 | INFO     | end of generic workflow (traces error code: 0)
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:35,169 | INFO     | traces error code: 0
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:35,169 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:39,979 | INFO     | PID=5938 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:39,980 | INFO     | found 0 job(s) in 20 queues
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:39,980 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:39,980 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:39,981 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:39,981 | INFO     | [monitor] control thread has ended
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:40,093 [wrapper] ==== pilot stdout END ====
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:40,098 [wrapper] ==== wrapper stdout RESUME ====
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:40,106 [wrapper] pilotpid: 5938
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:40,114 [wrapper] Pilot exit status: 0
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:40,160 [wrapper] pandaids: 6848025972
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:40,197 [wrapper] cleanup supervisor_pilot  7527 5939
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:40,202 [wrapper] Test setup, not cleaning
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:40,207 [wrapper] apfmon messages muted
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:40,212 [wrapper] ==== wrapper stdout END ====
2025-10-18 21:19:41 (642240): Guest Log: 2025-10-19 01:19:40,218 [wrapper] ==== wrapper stderr END ====
2025-10-18 21:19:41 (642240): Guest Log:  *** Error codes and diagnostics ***
2025-10-18 21:19:41 (642240): Guest Log:     "exeErrorCode": 0,
2025-10-18 21:19:41 (642240): Guest Log:     "exeErrorDiag": "",
2025-10-18 21:19:41 (642240): Guest Log:     "pilotErrorCode": 0,
2025-10-18 21:19:41 (642240): Guest Log:     "pilotErrorDiag": "",
2025-10-18 21:19:41 (642240): Guest Log:  *** Listing of results directory ***
2025-10-18 21:19:41 (642240): Guest Log: total 215192
2025-10-18 21:19:41 (642240): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 18 07:16 pilot3.tar.gz
2025-10-18 21:19:41 (642240): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 18 07:42 runpilot2-wrapper.sh
2025-10-18 21:19:41 (642240): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 18 07:42 queuedata.json
2025-10-18 21:19:41 (642240): Guest Log: -rwxr-xr-x. 1 atlas atlas      9016 Oct 18 17:17 init_data.xml
2025-10-18 21:19:41 (642240): Guest Log: -rwxr-xr-x. 1 atlas atlas    569678 Oct 18 17:17 input.tar.gz
2025-10-18 21:19:41 (642240): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 18 17:17 start_atlas.sh
2025-10-18 21:19:41 (642240): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 18 17:17 EVNT.46771634._001718.pool.root.1 -> /data/./ATLAS.root_0
2025-10-18 21:19:41 (642240): Guest Log: -rw-r--r--. 1 atlas atlas      2558 Oct 18 17:17 pandaJob.out
2025-10-18 21:19:41 (642240): Guest Log: -rw-------. 1 atlas atlas    976742 Oct 18 17:18 agis_schedconf.cvmfs.json
2025-10-18 21:19:41 (642240): Guest Log: drwx------. 5 atlas atlas      4096 Oct 18 17:18 pilot3
2025-10-18 21:19:41 (642240): Guest Log: -rw-------. 1 atlas atlas 207531661 Oct 19 01:18 HITS.46771637._039322.pool.root.1
2025-10-18 21:19:41 (642240): Guest Log: -rw-------. 1 atlas atlas      1027 Oct 19 01:18 memory_monitor_summary.json
2025-10-18 21:19:41 (642240): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 19 01:18 agis_ddmendpoints.agis.ALL.json
2025-10-18 21:19:41 (642240): Guest Log: -rw-------. 1 atlas atlas    560397 Oct 19 01:18 log.46771637._039322.job.log.tgz.1
2025-10-18 21:19:41 (642240): Guest Log: -rw-------. 1 atlas atlas      7824 Oct 19 01:19 heartbeat.json
2025-10-18 21:19:41 (642240): Guest Log: -rw-------. 1 atlas atlas        95 Oct 19 01:19 pilot_heartbeat.json
2025-10-18 21:19:41 (642240): Guest Log: -rw-------. 1 atlas atlas       744 Oct 19 01:19 pilotlog.txt
2025-10-18 21:19:41 (642240): Guest Log: -rw-------. 1 atlas atlas   3939929 Oct 19 01:19 log.46771637._039322.job.log.1
2025-10-18 21:19:41 (642240): Guest Log: -rw-------. 1 atlas atlas       357 Oct 19 01:19 output.list
2025-10-18 21:19:41 (642240): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 19 01:19 runtime_log
2025-10-18 21:19:41 (642240): Guest Log: -rw-------. 1 atlas atlas   4515840 Oct 19 01:19 result.tar.gz
2025-10-18 21:19:41 (642240): Guest Log: -rw-r--r--. 1 atlas atlas      8622 Oct 19 01:19 runtime_log.err
2025-10-18 21:19:41 (642240): Guest Log: -rw-------. 1 atlas atlas       652 Oct 19 01:19 83BNDmilGU8n9Rq4apOajLDm4fhM0noT9bVof3QYDm2kbMDmF4sQLm.diag
2025-10-18 21:19:41 (642240): Guest Log: Looking for outputfile HITS.46771637._039322.pool.root.1
2025-10-18 21:19:41 (642240): Guest Log: HITS file was successfully produced
2025-10-18 21:19:41 (642240): Guest Log: -rw-------. 1 atlas atlas 207531661 Oct 19 01:18 /home/atlas/RunAtlas/HITS.46771637._039322.pool.root.1
2025-10-18 21:19:44 (642240): Guest Log: Successfully finished the ATLAS job!
2025-10-18 21:19:44 (642240): Guest Log: Copying the results back to the shared directory!
2025-10-18 21:19:45 (642240): Guest Log:  *** Contents of shared directory: ***
2025-10-18 21:19:45 (642240): Guest Log: total 431356
2025-10-18 21:19:45 (642240): Guest Log: -rwxrwxrwx. 1 root root 229055314 Oct 18 17:16 ATLAS.root_0
2025-10-18 21:19:45 (642240): Guest Log: -rwxrwxrwx. 1 root root 207531661 Oct 19 01:19 HITS.pool.root.1
2025-10-18 21:19:45 (642240): Guest Log: -rwxrwxrwx. 1 root root      9016 Oct 18 17:16 init_data.xml
2025-10-18 21:19:45 (642240): Guest Log: -rwxrwxrwx. 1 root root    569678 Oct 18 12:30 input.tar.gz
2025-10-18 21:19:45 (642240): Guest Log: -rwxrwxrwx. 1 root root   4515840 Oct 19 01:19 result.tar.gz
2025-10-18 21:19:45 (642240): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 18 12:30 start_atlas.sh
2025-10-18 21:19:45 (642240): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-18 21:19:45 (642240): VM Completion File Detected.
2025-10-18 21:19:45 (642240): Powering off VM.
2025-10-18 21:19:46 (642240): Successfully stopped VM.
2025-10-18 21:19:46 (642240): Deregistering VM. (boinc_b548b3897f566c40, slot#10)
2025-10-18 21:19:46 (642240): Removing network bandwidth throttle group from VM.
2025-10-18 21:19:48 (642240): Removing VM from VirtualBox.
2025-10-18 21:19:53 (642240): called boinc_finish(0)

</stderr_txt>
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