Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:09:42 (1984091): wrapper (7.7.26015): starting
05:09:42 (1984091): wrapper: running run_atlas (--nthreads 8)
[2025-10-18 05:09:44] Arguments: --nthreads 8
[2025-10-18 05:09:44] Threads: 8
[2025-10-18 05:09:44] Checking for CVMFS
[2025-10-18 05:09:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 05:09:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 05:09:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 05:09:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 05:09:45] 2.11.3.0 4007 40113 197652 151850 0 551 32389765 45568001 12003 130560 0 251300382 99.875 96147211 24655 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-18 05:09:45] CVMFS is ok
[2025-10-18 05:09:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 05:09:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 05:09:45] Further information can be found at the LHC@home message board.
[2025-10-18 05:09:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 05:09:45] Checking for apptainer binary...
[2025-10-18 05:09:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 05:09:45] Running /usr/bin/apptainer --version
[2025-10-18 05:09:45] apptainer version 1.4.1-1.el9
[2025-10-18 05:09:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 05:09:46] wns0017.triumf.lcg
[2025-10-18 05:09:46] apptainer works
[2025-10-18 05:09:46] Set ATHENA_PROC_NUMBER=8
[2025-10-18 05:09:46] Set ATHENA_CORE_NUMBER=8
[2025-10-18 05:09:46] Starting ATLAS job with PandaID=6850043376
[2025-10-18 05:09:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 05:15:20]  *** The last 200 lines of the pilot log: ***
[2025-10-18 05:15:20] 2025-10-18 12:14:17,225 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 05:15:20] 2025-10-18 12:14:17,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 05:15:20] 2025-10-18 12:14:17,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 05:15:20] 2025-10-18 12:14:17,239 | WARNING  | wrong length of table data, x=[1760789472.0], y=[1584.0] (must be same and length>=4)
[2025-10-18 05:15:20] 2025-10-18 12:14:17,239 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-18 05:15:20] 2025-10-18 12:14:17,239 | INFO     | ..............................
[2025-10-18 05:15:20] 2025-10-18 12:14:17,239 | INFO     | . Timing measurements:
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . get job = 0 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . initial setup = 3 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . payload setup = 13 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . stage-in = 0 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . payload execution = 45 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . stage-out = 2 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . log creation = 0 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | ..............................
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6850043376/pilotlog.txt
[2025-10-18 05:15:20] 2025-10-18 12:14:17,272 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-18 05:15:20] - Log from pilotlog.txt -
[2025-10-18 05:15:20] 2025-10-18 12:14:17,224 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6850043376/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 05:15:20] 2025-10-18 12:14:17,225 | INFO     | extracted standard info from prmon json
[2025-10-18 05:15:20] 2025-10-18 12:14:17,225 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 05:15:20] 2025-10-18 12:14:17,225 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 05:15:20] 2025-10-18 12:14:17,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 05:15:20] 2025-10-18 12:14:17,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 05:15:20] 2025-10-18 12:14:17,239 | WARNING  | wrong length of table data, x=[1760789472.0], y=[1584.0] (must be same and length>=4)
[2025-10-18 05:15:20] 2025-10-18 12:14:17,239 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-18 05:15:20] 2025-10-18 12:14:17,239 | INFO     | ..............................
[2025-10-18 05:15:20] 2025-10-18 12:14:17,239 | INFO     | . Timing measurements:
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . get job = 0 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . initial setup = 3 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . payload setup = 13 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . stage-in = 0 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . payload execution = 45 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . stage-out = 2 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . log creation = 0 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | ..............................
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6850043376/pilotlog.txt
[2025-10-18 05:15:20] 2025-10-18 12:14:17,272 | WARNING  | 
[2025-10-18 05:15:20] [begin log extracts]
[2025-10-18 05:15:20] - Log from pilotlog.txt -
[2025-10-18 05:15:20] 2025-10-18 12:14:17,224 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6850043376/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 05:15:20] 2025-10-18 12:14:17,225 | INFO     | extracted standard info from prmon json
[2025-10-18 05:15:20] 2025-10-18 12:14:17,225 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 05:15:20] 2025-10-18 12:14:17,225 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 05:15:20] 2025-10-18 12:14:17,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 05:15:20] 2025-10-18 12:14:17,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 05:15:20] 2025-10-18 12:14:17,239 | WARNING  | wrong length of table data, x=[1760789472.0], y=[1584.0] (must be same and length>=4)
[2025-10-18 05:15:20] 2025-10-18 12:14:17,239 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-18 05:15:20] 2025-10-18 12:14:17,239 | INFO     | ..............................
[2025-10-18 05:15:20] 2025-10-18 12:14:17,239 | INFO     | . Timing measurements:
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . get job = 0 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . initial setup = 3 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . payload setup = 13 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . stage-in = 0 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . payload execution = 45 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . stage-out = 2 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | . log creation = 0 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | ..............................
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-18 05:15:20] 2025-10-18 12:14:17,240 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6850043376/pilotlog.txt
[2025-10-18 05:15:20] [end log extracts]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,272 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-18 05:15:20] 2025-10-18 12:14:17,273 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-18 05:15:20] 2025-10-18 12:14:17,591 | INFO     | 
[2025-10-18 05:15:20] 2025-10-18 12:14:17,591 | INFO     | job summary report
[2025-10-18 05:15:20] 2025-10-18 12:14:17,591 | INFO     | --------------------------------------------------
[2025-10-18 05:15:20] 2025-10-18 12:14:17,591 | INFO     | PanDA job id: 6850043376
[2025-10-18 05:15:20] 2025-10-18 12:14:17,591 | INFO     | task id: 46809188
[2025-10-18 05:15:20] 2025-10-18 12:14:17,591 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-18 05:11:38,246 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-18 05:15:20] 2025-10-18 12:14:17,591 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 05:15:20] 2025-10-18 12:14:17,592 | INFO     | pilot state: failed 
[2025-10-18 05:15:20] 2025-10-18 12:14:17,592 | INFO     | transexitcode: 65
[2025-10-18 05:15:20] 2025-10-18 12:14:17,592 | INFO     | exeerrorcode: 65
[2025-10-18 05:15:20] 2025-10-18 12:14:17,592 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-18 05:15:20] 2025-10-18 12:14:17,592 | INFO     | exitcode: 65
[2025-10-18 05:15:20] 2025-10-18 12:14:17,592 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-18 05:15:20] 2025-10-18 12:14:17,592 | INFO     | cpuconsumptiontime: 19 s
[2025-10-18 05:15:20] 2025-10-18 12:14:17,592 | INFO     | nevents: 0
[2025-10-18 05:15:20] 2025-10-18 12:14:17,592 | INFO     | neventsw: 0
[2025-10-18 05:15:20] 2025-10-18 12:14:17,592 | INFO     | pid: 2001587
[2025-10-18 05:15:20] 2025-10-18 12:14:17,592 | INFO     | pgrp: 2001587
[2025-10-18 05:15:20] 2025-10-18 12:14:17,592 | INFO     | corecount: 8
[2025-10-18 05:15:20] 2025-10-18 12:14:17,592 | INFO     | event service: False
[2025-10-18 05:15:20] 2025-10-18 12:14:17,592 | INFO     | sizes: {0: 2348777, 1: 2348777, 12: 2348805, 13: 2349095, 23: 2349151, 62: 2372544, 66: 2376836, 68: 2376864, 210: 2377030}
[2025-10-18 05:15:20] 2025-10-18 12:14:17,592 | INFO     | --------------------------------------------------
[2025-10-18 05:15:20] 2025-10-18 12:14:17,593 | INFO     | 
[2025-10-18 05:15:20] 2025-10-18 12:14:17,593 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-18 05:15:20] 2025-10-18 12:14:17,775 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,776 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,776 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,776 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,776 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,776 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,776 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,776 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,776 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,776 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,777 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,777 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,777 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,777 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,777 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,777 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,777 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,777 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 05:15:20] 2025-10-18 12:14:17,777 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,777 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 05:15:20] 2025-10-18 12:14:17,777 | INFO     | job 6850043376 has completed (purged errors)
[2025-10-18 05:15:20] 2025-10-18 12:14:17,778 | INFO     | overall cleanup function is called
[2025-10-18 05:15:20] 2025-10-18 12:14:18,793 | INFO     | --- collectZombieJob: --- 10, [2001587]
[2025-10-18 05:15:20] 2025-10-18 12:14:18,793 | INFO     | zombie collector waiting for pid 2001587
[2025-10-18 05:15:20] 2025-10-18 12:14:18,793 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 05:15:20] 2025-10-18 12:14:18,794 | INFO     | collected zombie processes
[2025-10-18 05:15:20] 2025-10-18 12:14:18,794 | INFO     | will attempt to kill all subprocesses of pid=2001587
[2025-10-18 05:15:20] 2025-10-18 12:14:19,206 | INFO     | process IDs to be killed: [2001587] (in reverse order)
[2025-10-18 05:15:20] 2025-10-18 12:14:19,483 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 05:15:20] 2025-10-18 12:14:19,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 05:15:20] 2025-10-18 12:14:19,502 | INFO     | did not find any defunct processes belonging to 2001587
[2025-10-18 05:15:20] 2025-10-18 12:14:19,516 | INFO     | did not find any defunct processes belonging to 2001587
[2025-10-18 05:15:20] 2025-10-18 12:14:19,532 | INFO     | ready for new job
[2025-10-18 05:15:20] 2025-10-18 12:14:19,532 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 05:15:20] 2025-10-18 12:14:19,534 | INFO     | ***************************************
[2025-10-18 05:15:20] 2025-10-18 12:14:19,534 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 05:15:20] 2025-10-18 12:14:19,534 | INFO     | ***************************************
[2025-10-18 05:15:20] 2025-10-18 12:14:19,534 | INFO     | 
[2025-10-18 05:15:20] 2025-10-18 12:14:19,536 | INFO     | architecture information:
[2025-10-18 05:15:20] 2025-10-18 12:14:19,536 | INFO     | executing command: cat /etc/os-release
[2025-10-18 05:15:20] 2025-10-18 12:14:19,563 | INFO     | cat /etc/os-release:
[2025-10-18 05:15:20] NAME="CentOS Linux"
[2025-10-18 05:15:20] VERSION="7 (Core)"
[2025-10-18 05:15:20] ID="centos"
[2025-10-18 05:15:20] ID_LIKE="rhel fedora"
[2025-10-18 05:15:20] VERSION_ID="7"
[2025-10-18 05:15:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 05:15:20] ANSI_COLOR="0;31"
[2025-10-18 05:15:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 05:15:20] HOME_URL="https://www.centos.org/"
[2025-10-18 05:15:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 05:15:20] 
[2025-10-18 05:15:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 05:15:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 05:15:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 05:15:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 05:15:20] 
[2025-10-18 05:15:20] 2025-10-18 12:14:19,563 | INFO     | ***************************************
[2025-10-18 05:15:20] 2025-10-18 12:14:20,068 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-18 05:15:20] 2025-10-18 12:14:20,104 | INFO     | sufficient remaining disk space (1234694045696 B)
[2025-10-18 05:15:20] 2025-10-18 12:14:20,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 05:15:20] 2025-10-18 12:14:20,104 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 05:15:20] 2025-10-18 12:14:20,104 | INFO     | update_server=False
[2025-10-18 05:15:20] 2025-10-18 12:14:20,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 05:15:20] 2025-10-18 12:14:20,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 05:15:20] 2025-10-18 12:14:20,104 | INFO     | aborting loop
[2025-10-18 05:15:20] 2025-10-18 12:14:20,798 | INFO     | all job control threads have been joined
[2025-10-18 05:15:20] 2025-10-18 12:14:20,961 | INFO     | all data control threads have been joined
[2025-10-18 05:15:20] 2025-10-18 12:14:21,014 | INFO     | all payload control threads have been joined
[2025-10-18 05:15:20] 2025-10-18 12:14:21,109 | INFO     | [job] retrieve thread has finished
[2025-10-18 05:15:20] 2025-10-18 12:14:21,110 | INFO     | [job] job monitor thread has finished
[2025-10-18 05:15:20] 2025-10-18 12:14:21,131 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 05:15:20] 2025-10-18 12:14:21,137 | INFO     | [job] validate thread has finished
[2025-10-18 05:15:20] 2025-10-18 12:14:21,138 | INFO     | [data] copytool_in thread has finished
[2025-10-18 05:15:20] 2025-10-18 12:14:21,138 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 05:15:20] 2025-10-18 12:14:21,263 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 05:15:20] 2025-10-18 12:14:21,380 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 05:15:20] 2025-10-18 12:14:21,622 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 05:15:20] 2025-10-18 12:14:21,804 | INFO     | [job] control thread has finished
[2025-10-18 05:15:20] 2025-10-18 12:14:21,830 | INFO     | [payload] failed_post thread has finished
[2025-10-18 05:15:20] 2025-10-18 12:14:21,923 | INFO     | [payload] validate_post thread has finished
[2025-10-18 05:15:20] 2025-10-18 12:14:21,967 | INFO     | [data] control thread has finished
[2025-10-18 05:15:20] 2025-10-18 12:14:22,020 | INFO     | [payload] control thread has finished
[2025-10-18 05:15:20] 2025-10-18 12:14:22,279 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 05:15:20] 2025-10-18 12:14:22,605 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 05:15:20] 2025-10-18 12:14:23,388 | INFO     | [data] copytool_out thread has finished
[2025-10-18 05:15:20] 2025-10-18 12:14:23,611 | INFO     | [job] queue monitor thread has finished
[2025-10-18 05:15:20] 2025-10-18 12:14:25,634 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 05:15:20] 2025-10-18 12:14:49,504 | INFO     | PID=1987845 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 05:15:20] 2025-10-18 12:14:49,505 | INFO     | .. there are 26 such processes running
[2025-10-18 05:15:20] 2025-10-18 12:14:49,505 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 05:15:20] 2025-10-18 12:14:49,505 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 05:15:20] 2025-10-18 12:14:49,505 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 05:15:20] 2025-10-18 12:15:12,352 | INFO     | [monitor] cgroup control has ended
[2025-10-18 05:15:20] 2025-10-18 12:15:14,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139710021433152)>', '<ExcThread(monitor, started 139709003048704)>']
[2025-10-18 05:15:20] 2025-10-18 12:15:14,663 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 05:15:20] 2025-10-18 12:15:14,663 | INFO     | [monitor] control thread has ended
[2025-10-18 05:15:20] 2025-10-18 12:15:19,136 | INFO     | all workflow threads have been joined
[2025-10-18 05:15:20] 2025-10-18 12:15:19,136 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 05:15:20] 2025-10-18 12:15:19,137 | INFO     | traces error code: 0
[2025-10-18 05:15:20] 2025-10-18 12:15:19,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 05:15:20] 2025-10-18 12:15:19,661 [wrapper] ==== pilot stdout END ====
[2025-10-18 05:15:20] 2025-10-18 12:15:19,717 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 05:15:20] 2025-10-18 12:15:19,788 [wrapper] pilotpid: 1987845
[2025-10-18 05:15:20] 2025-10-18 12:15:19,877 [wrapper] Pilot exit status: 0
[2025-10-18 05:15:20] 2025-10-18 12:15:20,008 [wrapper] pandaids: 6850043376
[2025-10-18 05:15:20] 2025-10-18 12:15:20,053 [wrapper] cleanup supervisor_pilot 1987851 1987846
[2025-10-18 05:15:20] 2025-10-18 12:15:20,055 [wrapper] Test setup, not cleaning
[2025-10-18 05:15:20] 2025-10-18 12:15:20,058 [wrapper] apfmon messages muted
[2025-10-18 05:15:20] 2025-10-18 12:15:20,061 [wrapper] ==== wrapper stdout END ====
[2025-10-18 05:15:20] 2025-10-18 12:15:20,063 [wrapper] ==== wrapper stderr END ====
[2025-10-18 05:15:20]  *** Error codes and diagnostics ***
[2025-10-18 05:15:20]     "exeErrorCode": 65,
[2025-10-18 05:15:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-18 05:15:20]     "pilotErrorCode": 1305,
[2025-10-18 05:15:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-18 05:15:20]  *** Listing of results directory ***
[2025-10-18 05:15:20] total 189264
[2025-10-18 05:15:20] -rw-r--r--. 1 boinc boinc    557409 Oct 18 02:40 pilot3.tar.gz
[2025-10-18 05:15:20] -rw-r--r--. 1 boinc boinc      5112 Oct 18 02:51 queuedata.json
[2025-10-18 05:15:20] -rwx------. 1 boinc boinc     36292 Oct 18 02:51 runpilot2-wrapper.sh
[2025-10-18 05:15:20] -rw-r--r--. 1 boinc boinc       100 Oct 18 05:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 05:15:20] -rwxr-xr-x. 1 boinc boinc      7986 Oct 18 05:09 run_atlas
[2025-10-18 05:15:20] -rw-r--r--. 1 boinc boinc       105 Oct 18 05:09 job.xml
[2025-10-18 05:15:20] -rw-r--r--. 1 boinc boinc      6444 Oct 18 05:09 init_data.xml
[2025-10-18 05:15:20] -rw-r--r--. 2 boinc boinc 189671234 Oct 18 05:09 EVNT.46809186._000035.pool.root.1
[2025-10-18 05:15:20] -rw-r--r--. 2 boinc boinc     15120 Oct 18 05:09 start_atlas.sh
[2025-10-18 05:15:20] drwxrwx--x. 2 boinc boinc      4096 Oct 18 05:09 shared
[2025-10-18 05:15:20] -rw-r--r--. 2 boinc boinc    569670 Oct 18 05:09 input.tar.gz
[2025-10-18 05:15:20] -rw-r--r--. 1 boinc boinc         0 Oct 18 05:09 boinc_lockfile
[2025-10-18 05:15:20] -rw-r--r--. 1 boinc boinc      2487 Oct 18 05:09 pandaJob.out
[2025-10-18 05:15:20] -rw-------. 1 boinc boinc    976750 Oct 18 05:10 agis_schedconf.cvmfs.json
[2025-10-18 05:15:20] -rw-------. 1 boinc boinc   1560740 Oct 18 05:10 agis_ddmendpoints.agis.ALL.json
[2025-10-18 05:15:20] drwx------. 5 boinc boinc      4096 Oct 18 05:10 pilot3
[2025-10-18 05:15:20] -rw-r--r--. 1 boinc boinc       523 Oct 18 05:11 boinc_task_state.xml
[2025-10-18 05:15:20] -rw-------. 1 boinc boinc       958 Oct 18 05:11 memory_monitor_summary.json
[2025-10-18 05:15:20] -rw-------. 1 boinc boinc     21860 Oct 18 05:11 log.46809188._001797.job.log.tgz.1
[2025-10-18 05:15:20] -rw-------. 1 boinc boinc        95 Oct 18 05:14 pilot_heartbeat.json
[2025-10-18 05:15:20] -rw-------. 1 boinc boinc      8401 Oct 18 05:14 heartbeat.json
[2025-10-18 05:15:20] -rw-r--r--. 1 boinc boinc      8192 Oct 18 05:15 boinc_mmap_file
[2025-10-18 05:15:20] -rw-r--r--. 1 boinc boinc        22 Oct 18 05:15 wrapper_checkpoint.txt
[2025-10-18 05:15:20] -rw-------. 1 boinc boinc      4823 Oct 18 05:15 pilotlog.txt
[2025-10-18 05:15:20] -rw-------. 1 boinc boinc     91659 Oct 18 05:15 log.46809188._001797.job.log.1
[2025-10-18 05:15:20] -rw-------. 1 boinc boinc       188 Oct 18 05:15 output.list
[2025-10-18 05:15:20] -rw-r--r--. 1 boinc boinc       620 Oct 18 05:15 runtime_log
[2025-10-18 05:15:20] -rw-------. 1 boinc boinc    133120 Oct 18 05:15 result.tar.gz
[2025-10-18 05:15:20] -rw-r--r--. 1 boinc boinc      8526 Oct 18 05:15 runtime_log.err
[2025-10-18 05:15:20] -rw-------. 1 boinc boinc       646 Oct 18 05:15 1rBMDmZmIU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmWxbMDmWvgxwn.diag
[2025-10-18 05:15:20] -rw-r--r--. 1 boinc boinc     21796 Oct 18 05:15 stderr.txt
[2025-10-18 05:15:20] No HITS result produced
[2025-10-18 05:15:20]  *** Contents of shared directory: ***
[2025-10-18 05:15:20] total 185940
[2025-10-18 05:15:20] -rw-r--r--. 2 boinc boinc 189671234 Oct 18 05:09 ATLAS.root_0
[2025-10-18 05:15:20] -rw-r--r--. 2 boinc boinc     15120 Oct 18 05:09 start_atlas.sh
[2025-10-18 05:15:20] -rw-r--r--. 2 boinc boinc    569670 Oct 18 05:09 input.tar.gz
[2025-10-18 05:15:20] -rw-------. 1 boinc boinc    133120 Oct 18 05:15 result.tar.gz
05:15:21 (1984091): run_atlas exited; CPU time 28.323040
05:15:21 (1984091): called boinc_finish(0)

</stderr_txt>
]]>

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