Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
07:42:17 (2323016): wrapper (7.7.26015): starting
07:42:17 (2323016): wrapper: running run_atlas (--nthreads 12)
[2025-10-18 07:42:17] Arguments: --nthreads 12
[2025-10-18 07:42:17] Threads: 12
[2025-10-18 07:42:17] Checking for CVMFS
[2025-10-18 07:42:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 07:42:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 07:42:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 07:42:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 07:42:18] 2.13.2.0 2053026 133 50068 151851 2 57 16675963 16777216 398 130560 0 469486 99.996 5396 1782 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-10-18 07:42:18] CVMFS is ok
[2025-10-18 07:42:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 07:42:18] Checking for apptainer binary...
[2025-10-18 07:42:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 07:42:18] Running /usr/bin/apptainer --version
[2025-10-18 07:42:18] apptainer version 1.3.0-bp160.1.36
[2025-10-18 07:42:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 07:42:18] boinc-runner
[2025-10-18 07:42:18] apptainer works
[2025-10-18 07:42:18] Set ATHENA_PROC_NUMBER=12
[2025-10-18 07:42:18] Set ATHENA_CORE_NUMBER=12
[2025-10-18 07:42:18] Starting ATLAS job with PandaID=6837399571
[2025-10-18 07:42:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 08:12:33]  *** The last 200 lines of the pilot log: ***
[2025-10-18 08:12:33]  scope=mc23_13p6TeV
[2025-10-18 08:12:33]  status=None
[2025-10-18 08:12:33]  status_code=0
[2025-10-18 08:12:33]  storage_token=
[2025-10-18 08:12:33]  surl=/var/lib/boinc/slots/3/PanDA_Pilot-6837399571/log.46676269._031537.job.log.tgz.1
[2025-10-18 08:12:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b6/09/log.46676269._031537.job.log.tgz.1
[2025-10-18 08:12:33]  workdir=None
[2025-10-18 08:12:33] ]
[2025-10-18 08:12:33] 2025-10-18 13:11:30,552 | INFO     | transferring file log.46676269._031537.job.log.tgz.1 from /var/lib/boinc/slots/3/PanDA_Pilot-6837399571/log.46676269._031537.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-18 08:12:33] 2025-10-18 13:11:30,553 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/3/PanDA_Pilot-6837399571/log.46676269._031537.job.log.tgz.1 /var/lib/boinc/slots/3/log.46676269._031537.job
[2025-10-18 08:12:33] 2025-10-18 13:11:30,565 | INFO     | adding to output.list: log.46676269._031537.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b6/09/log.46676269._031537.job.log.tg
[2025-10-18 08:12:33] 2025-10-18 13:11:30,565 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 08:12:33] 2025-10-18 13:11:30,565 | INFO     | summary of transferred files:
[2025-10-18 08:12:33] 2025-10-18 13:11:30,565 | INFO     |  -- lfn=log.46676269._031537.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 08:12:33] 2025-10-18 13:11:30,566 | INFO     | stage-out finished correctly
[2025-10-18 08:12:33] 2025-10-18 13:11:32,218 | INFO     | time since job start (1748s) is within the limit (172800.0s)
[2025-10-18 08:12:33] 2025-10-18 13:11:32,783 | INFO     | monitor loop #138: job 0:6837399571 is in state 'finished'
[2025-10-18 08:12:33] 2025-10-18 13:11:32,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 08:12:33] 2025-10-18 13:11:33,302 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 08:12:33] 2025-10-18 13:11:33,335 | INFO     | job 6837399571 has state=finished
[2025-10-18 08:12:33] 2025-10-18 13:11:33,335 | INFO     | preparing for final server update for job 6837399571 in state='finished'
[2025-10-18 08:12:33] 2025-10-18 13:11:33,335 | INFO     | this job has now completed (state=finished)
[2025-10-18 08:12:33] 2025-10-18 13:11:33,336 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 08:12:33] 2025-10-18 13:11:33,336 | INFO     | log transfer has been attempted: DONE
[2025-10-18 08:12:33] 2025-10-18 13:11:33,336 | INFO     | job 6837399571 has finished - writing final server update
[2025-10-18 08:12:33] 2025-10-18 13:11:33,336 | INFO     | total number of processed events: 400 (read)
[2025-10-18 08:12:33] 2025-10-18 13:11:33,336 | INFO     | executing command: lscpu
[2025-10-18 08:12:33] 2025-10-18 13:11:33,342 | INFO     | PID=2326897 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 08:12:33] 2025-10-18 13:11:33,342 | INFO     | .. there are 2 such processes running
[2025-10-18 08:12:33] 2025-10-18 13:11:33,354 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 08:12:33] 2025-10-18 13:11:34,344 | INFO     | time since job start (1750s) is within the limit (172800.0s)
[2025-10-18 08:12:33] 2025-10-18 13:11:35,286 | INFO     | monitor loop #139: job 0:6837399571 is in state 'finished'
[2025-10-18 08:12:33] 2025-10-18 13:11:35,287 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 08:12:33] 2025-10-18 13:11:36,349 | INFO     | time since job start (1752s) is within the limit (172800.0s)
[2025-10-18 08:12:33] 2025-10-18 13:11:37,731 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-18 08:12:33] 2025-10-18 13:11:37,734 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3958.2429374999992
[2025-10-18 08:12:33] 2025-10-18 13:11:37,738 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6837399571/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 08:12:33] 2025-10-18 13:11:37,740 | INFO     | extracted standard info from prmon json
[2025-10-18 08:12:33] 2025-10-18 13:11:37,740 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 08:12:33] 2025-10-18 13:11:37,740 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 08:12:33] 2025-10-18 13:11:37,740 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 08:12:33] 2025-10-18 13:11:37,740 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 08:12:33] 2025-10-18 13:11:37,741 | INFO     | fitting pss+swap vs Time
[2025-10-18 08:12:33] 2025-10-18 13:11:37,741 | INFO     | sum of square deviations: 3294945.5
[2025-10-18 08:12:33] 2025-10-18 13:11:37,741 | INFO     | sum of deviations: -192834908.0
[2025-10-18 08:12:33] 2025-10-18 13:11:37,741 | INFO     | mean x: 1760792305.5
[2025-10-18 08:12:33] 2025-10-18 13:11:37,741 | INFO     | mean y: 2897970.272727273
[2025-10-18 08:12:33] 2025-10-18 13:11:37,741 | INFO     | -- intersect: 103052317828.11267
[2025-10-18 08:12:33] 2025-10-18 13:11:37,742 | INFO     | intersect: 103052317828.11267
[2025-10-18 08:12:33] 2025-10-18 13:11:37,742 | INFO     | chi2: 0.001299282887414944
[2025-10-18 08:12:33] 2025-10-18 13:11:37,742 | INFO     | -- intersect: 103052317828.11267
[2025-10-18 08:12:33] 2025-10-18 13:11:37,742 | INFO     | current memory leak: -58.52 B/s (using 22 data points, chi2=0.00)
[2025-10-18 08:12:33] 2025-10-18 13:11:37,742 | INFO     | could have reported an average CPU frequency of 4066 MHz (4 samples)
[2025-10-18 08:12:33] 2025-10-18 13:11:37,743 | INFO     | ..............................
[2025-10-18 08:12:33] 2025-10-18 13:11:37,743 | INFO     | . Timing measurements:
[2025-10-18 08:12:33] 2025-10-18 13:11:37,743 | INFO     | . get job = 0 s
[2025-10-18 08:12:33] 2025-10-18 13:11:37,743 | INFO     | . initial setup = 2 s
[2025-10-18 08:12:33] 2025-10-18 13:11:37,743 | INFO     | . payload setup = 1 s
[2025-10-18 08:12:33] 2025-10-18 13:11:37,743 | INFO     | . stage-in = 0 s
[2025-10-18 08:12:33] 2025-10-18 13:11:37,743 | INFO     | . payload execution = 1728 s
[2025-10-18 08:12:33] 2025-10-18 13:11:37,743 | INFO     | . stage-out = 0 s
[2025-10-18 08:12:33] 2025-10-18 13:11:37,743 | INFO     | . log creation = 0 s
[2025-10-18 08:12:33] 2025-10-18 13:11:37,743 | INFO     | ..............................
[2025-10-18 08:12:33] 2025-10-18 13:11:37,781 | INFO     | 
[2025-10-18 08:12:33] 2025-10-18 13:11:37,781 | INFO     | job summary report
[2025-10-18 08:12:33] 2025-10-18 13:11:37,781 | INFO     | --------------------------------------------------
[2025-10-18 08:12:33] 2025-10-18 13:11:37,781 | INFO     | PanDA job id: 6837399571
[2025-10-18 08:12:33] 2025-10-18 13:11:37,781 | INFO     | task id: 46676269
[2025-10-18 08:12:33] 2025-10-18 13:11:37,781 | INFO     | errors: (none)
[2025-10-18 08:12:33] 2025-10-18 13:11:37,781 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 08:12:33] 2025-10-18 13:11:37,781 | INFO     | pilot state: finished 
[2025-10-18 08:12:33] 2025-10-18 13:11:37,781 | INFO     | transexitcode: 0
[2025-10-18 08:12:33] 2025-10-18 13:11:37,781 | INFO     | exeerrorcode: 0
[2025-10-18 08:12:33] 2025-10-18 13:11:37,781 | INFO     | exeerrordiag: 
[2025-10-18 08:12:33] 2025-10-18 13:11:37,781 | INFO     | exitcode: 0
[2025-10-18 08:12:33] 2025-10-18 13:11:37,781 | INFO     | exitmsg: OK
[2025-10-18 08:12:33] 2025-10-18 13:11:37,781 | INFO     | cpuconsumptiontime: 18737 s
[2025-10-18 08:12:33] 2025-10-18 13:11:37,781 | INFO     | nevents: 400
[2025-10-18 08:12:33] 2025-10-18 13:11:37,781 | INFO     | neventsw: 0
[2025-10-18 08:12:33] 2025-10-18 13:11:37,781 | INFO     | pid: 2335880
[2025-10-18 08:12:33] 2025-10-18 13:11:37,781 | INFO     | pgrp: 2335880
[2025-10-18 08:12:33] 2025-10-18 13:11:37,782 | INFO     | corecount: 12
[2025-10-18 08:12:33] 2025-10-18 13:11:37,782 | INFO     | event service: False
[2025-10-18 08:12:33] 2025-10-18 13:11:37,782 | INFO     | sizes: {0: 2348921, 2: 2349183, 11: 2349211, 1734: 2383136, 1737: 2383136, 1742: 2383330}
[2025-10-18 08:12:33] 2025-10-18 13:11:37,782 | INFO     | --------------------------------------------------
[2025-10-18 08:12:33] 2025-10-18 13:11:37,782 | INFO     | 
[2025-10-18 08:12:33] 2025-10-18 13:11:37,782 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-18 08:12:33] 2025-10-18 13:11:37,794 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,794 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,794 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,794 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,794 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,794 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,794 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,794 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,794 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,794 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,794 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,794 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,794 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,794 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,794 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,794 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,794 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,795 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 08:12:33] 2025-10-18 13:11:37,795 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,795 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 08:12:33] 2025-10-18 13:11:37,795 | INFO     | job 6837399571 has completed (purged errors)
[2025-10-18 08:12:33] 2025-10-18 13:11:37,795 | INFO     | overall cleanup function is called
[2025-10-18 08:12:33] 2025-10-18 13:11:38,801 | INFO     | --- collectZombieJob: --- 10, [2335880]
[2025-10-18 08:12:33] 2025-10-18 13:11:38,801 | INFO     | zombie collector waiting for pid 2335880
[2025-10-18 08:12:33] 2025-10-18 13:11:38,801 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 08:12:33] 2025-10-18 13:11:38,802 | INFO     | collected zombie processes
[2025-10-18 08:12:33] 2025-10-18 13:11:38,802 | INFO     | will attempt to kill all subprocesses of pid=2335880
[2025-10-18 08:12:33] 2025-10-18 13:11:38,850 | INFO     | process IDs to be killed: [2335880] (in reverse order)
[2025-10-18 08:12:33] 2025-10-18 13:11:38,876 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 08:12:33] 2025-10-18 13:11:38,876 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 08:12:33] 2025-10-18 13:11:38,880 | INFO     | did not find any defunct processes belonging to 2335880
[2025-10-18 08:12:33] 2025-10-18 13:11:38,882 | INFO     | did not find any defunct processes belonging to 2335880
[2025-10-18 08:12:33] 2025-10-18 13:11:38,883 | INFO     | ready for new job
[2025-10-18 08:12:33] 2025-10-18 13:11:38,883 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 08:12:33] 2025-10-18 13:11:38,884 | INFO     | ***************************************
[2025-10-18 08:12:33] 2025-10-18 13:11:38,884 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 08:12:33] 2025-10-18 13:11:38,884 | INFO     | ***************************************
[2025-10-18 08:12:33] 2025-10-18 13:11:38,884 | INFO     | 
[2025-10-18 08:12:33] 2025-10-18 13:11:38,885 | INFO     | architecture information:
[2025-10-18 08:12:33] 2025-10-18 13:11:38,885 | INFO     | executing command: cat /etc/os-release
[2025-10-18 08:12:33] 2025-10-18 13:11:38,894 | INFO     | cat /etc/os-release:
[2025-10-18 08:12:33] NAME="CentOS Linux"
[2025-10-18 08:12:33] VERSION="7 (Core)"
[2025-10-18 08:12:33] ID="centos"
[2025-10-18 08:12:33] ID_LIKE="rhel fedora"
[2025-10-18 08:12:33] VERSION_ID="7"
[2025-10-18 08:12:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 08:12:33] ANSI_COLOR="0;31"
[2025-10-18 08:12:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 08:12:33] HOME_URL="https://www.centos.org/"
[2025-10-18 08:12:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 08:12:33] 
[2025-10-18 08:12:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 08:12:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 08:12:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 08:12:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 08:12:33] 
[2025-10-18 08:12:33] 2025-10-18 13:11:38,894 | INFO     | ***************************************
[2025-10-18 08:12:33] 2025-10-18 13:11:39,397 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-18 08:12:33] 2025-10-18 13:11:39,406 | INFO     | sufficient remaining disk space (3855957884928 B)
[2025-10-18 08:12:33] 2025-10-18 13:11:39,406 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 08:12:33] 2025-10-18 13:11:39,406 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 08:12:33] 2025-10-18 13:11:39,406 | INFO     | update_server=False
[2025-10-18 08:12:33] 2025-10-18 13:11:39,406 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 08:12:33] 2025-10-18 13:11:39,406 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 08:12:33] 2025-10-18 13:11:39,406 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 08:12:33] 2025-10-18 13:11:39,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 08:12:33] 2025-10-18 13:11:39,407 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 08:12:33] 2025-10-18 13:11:39,407 | INFO     | aborting loop
[2025-10-18 08:12:33] 2025-10-18 13:11:40,265 | INFO     | all payload control threads have been joined
[2025-10-18 08:12:33] 2025-10-18 13:11:40,277 | INFO     | all data control threads have been joined
[2025-10-18 08:12:33] 2025-10-18 13:11:40,411 | INFO     | [job] queue monitor thread has finished
[2025-10-18 08:12:33] 2025-10-18 13:11:40,412 | INFO     | [job] retrieve thread has finished
[2025-10-18 08:12:33] 2025-10-18 13:11:40,412 | INFO     | [job] job monitor thread has finished
[2025-10-18 08:12:33] 2025-10-18 13:11:40,852 | INFO     | [payload] validate_post thread has finished
[2025-10-18 08:12:33] 2025-10-18 13:11:41,097 | INFO     | all job control threads have been joined
[2025-10-18 08:12:33] 2025-10-18 13:11:41,270 | INFO     | [payload] control thread has finished
[2025-10-18 08:12:33] 2025-10-18 13:11:41,282 | INFO     | [data] control thread has finished
[2025-10-18 08:12:33] 2025-10-18 13:11:41,348 | INFO     | [job] validate thread has finished
[2025-10-18 08:12:33] 2025-10-18 13:11:41,373 | INFO     | [data] copytool_in thread has finished
[2025-10-18 08:12:33] 2025-10-18 13:11:41,406 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 08:12:33] 2025-10-18 13:11:41,411 | INFO     | [data] copytool_out thread has finished
[2025-10-18 08:12:33] 2025-10-18 13:11:41,480 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 08:12:33] 2025-10-18 13:11:41,593 | INFO     | [payload] failed_post thread has finished
[2025-10-18 08:12:33] 2025-10-18 13:11:41,717 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 08:12:33] 2025-10-18 13:11:42,102 | INFO     | [job] control thread has finished
[2025-10-18 08:12:33] 2025-10-18 13:11:43,411 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 08:12:33] 2025-10-18 13:11:49,962 | INFO     | job.realtimelogging is not enabled
[2025-10-18 08:12:33] 2025-10-18 13:11:50,967 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 08:12:33] 2025-10-18 13:12:09,506 | INFO     | PID=2326897 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 08:12:33] 2025-10-18 13:12:09,507 | INFO     | .. there are 2 such processes running
[2025-10-18 08:12:33] 2025-10-18 13:12:09,507 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 08:12:33] 2025-10-18 13:12:09,507 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 08:12:33] 2025-10-18 13:12:09,507 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 08:12:33] 2025-10-18 13:12:21,018 [wrapper] supervise_pilot (15 min periods counter: 3)
[2025-10-18 08:12:33] 2025-10-18 13:12:26,628 | INFO     | [monitor] cgroup control has ended
[2025-10-18 08:12:33] 2025-10-18 13:12:28,585 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140699916068672)>', '<ExcThread(monitor, started 140699286624000)>']
[2025-10-18 08:12:33] 2025-10-18 13:12:28,600 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 08:12:33] 2025-10-18 13:12:28,600 | INFO     | [monitor] control thread has ended
[2025-10-18 08:12:33] 2025-10-18 13:12:33,609 | INFO     | all workflow threads have been joined
[2025-10-18 08:12:33] 2025-10-18 13:12:33,609 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 08:12:33] 2025-10-18 13:12:33,610 | INFO     | traces error code: 0
[2025-10-18 08:12:33] 2025-10-18 13:12:33,610 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 08:12:33] 2025-10-18 13:12:33,676 [wrapper] ==== pilot stdout END ====
[2025-10-18 08:12:33] 2025-10-18 13:12:33,678 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 08:12:33] 2025-10-18 13:12:33,680 [wrapper] pilotpid: 2326897
[2025-10-18 08:12:33] 2025-10-18 13:12:33,682 [wrapper] Pilot exit status: 0
[2025-10-18 08:12:33] 2025-10-18 13:12:33,687 [wrapper] pandaids: 6837399571
[2025-10-18 08:12:33] 2025-10-18 13:12:33,705 [wrapper] cleanup supervisor_pilot 2384332 2326898
[2025-10-18 08:12:33] 2025-10-18 13:12:33,707 [wrapper] Test setup, not cleaning
[2025-10-18 08:12:33] 2025-10-18 13:12:33,709 [wrapper] apfmon messages muted
[2025-10-18 08:12:33] 2025-10-18 13:12:33,710 [wrapper] ==== wrapper stdout END ====
[2025-10-18 08:12:33] 2025-10-18 13:12:33,712 [wrapper] ==== wrapper stderr END ====
[2025-10-18 08:12:33]  *** Error codes and diagnostics ***
[2025-10-18 08:12:33]     "exeErrorCode": 0,
[2025-10-18 08:12:33]     "exeErrorDiag": "",
[2025-10-18 08:12:33]     "pilotErrorCode": 0,
[2025-10-18 08:12:33]     "pilotErrorDiag": "",
[2025-10-18 08:12:33]  *** Listing of results directory ***
[2025-10-18 08:12:33] total 410940
[2025-10-18 08:12:33] -rw-r--r--. 1 boinc boinc    557409 Oct  9 22:28 pilot3.tar.gz
[2025-10-18 08:12:33] -rwx------. 1 boinc boinc     36292 Oct  9 22:35 runpilot2-wrapper.sh
[2025-10-18 08:12:33] -rw-r--r--. 1 boinc boinc      5112 Oct  9 22:35 queuedata.json
[2025-10-18 08:12:33] -rw-r--r--. 1 boinc boinc       100 Oct 18 07:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 08:12:33] -rwxr-xr-x. 1 boinc boinc      7986 Oct 18 07:42 run_atlas
[2025-10-18 08:12:33] -rw-r--r--. 1 boinc boinc       105 Oct 18 07:42 job.xml
[2025-10-18 08:12:33] -rw-r--r--. 2 boinc boinc     15120 Oct 18 07:42 start_atlas.sh
[2025-10-18 08:12:33] drwxrwx--x. 1 boinc boinc        76 Oct 18 07:42 shared
[2025-10-18 08:12:33] -rw-r--r--. 2 boinc boinc    569673 Oct 18 07:42 input.tar.gz
[2025-10-18 08:12:33] -rw-r--r--. 2 boinc boinc 220838098 Oct 18 07:42 EVNT.46676267._001285.pool.root.1
[2025-10-18 08:12:33] -rw-r--r--. 1 boinc boinc         0 Oct 18 07:42 boinc_setup_complete
[2025-10-18 08:12:33] -rw-r--r--. 1 boinc boinc     10052 Oct 18 07:42 init_data.xml
[2025-10-18 08:12:33] -rw-r--r--. 1 boinc boinc         0 Oct 18 07:42 boinc_lockfile
[2025-10-18 08:12:33] -rw-r--r--. 1 boinc boinc      2550 Oct 18 07:42 pandaJob.out
[2025-10-18 08:12:33] -rw-------. 1 boinc boinc    976750 Oct 18 07:42 agis_schedconf.cvmfs.json
[2025-10-18 08:12:33] -rw-------. 1 boinc boinc   1560740 Oct 18 07:42 agis_ddmendpoints.agis.ALL.json
[2025-10-18 08:12:33] drwx------. 1 boinc boinc       414 Oct 18 07:42 pilot3
[2025-10-18 08:12:33] -rw-------. 1 boinc boinc 194776940 Oct 18 08:11 HITS.46676269._031537.pool.root.1
[2025-10-18 08:12:33] -rw-r--r--. 1 boinc boinc       529 Oct 18 08:11 boinc_task_state.xml
[2025-10-18 08:12:33] -rw-------. 1 boinc boinc      1028 Oct 18 08:11 memory_monitor_summary.json
[2025-10-18 08:12:33] -rw-------. 1 boinc boinc    354091 Oct 18 08:11 log.46676269._031537.job.log.tgz.1
[2025-10-18 08:12:33] -rw-------. 1 boinc boinc        95 Oct 18 08:11 pilot_heartbeat.json
[2025-10-18 08:12:33] -rw-------. 1 boinc boinc      7793 Oct 18 08:11 heartbeat.json
[2025-10-18 08:12:33] -rw-r--r--. 1 boinc boinc      8192 Oct 18 08:12 boinc_mmap_file
[2025-10-18 08:12:33] -rw-r--r--. 1 boinc boinc        27 Oct 18 08:12 wrapper_checkpoint.txt
[2025-10-18 08:12:33] -rw-------. 1 boinc boinc      4897 Oct 18 08:12 pilotlog.txt
[2025-10-18 08:12:33] -rw-------. 1 boinc boinc    297143 Oct 18 08:12 log.46676269._031537.job.log.1
[2025-10-18 08:12:33] -rw-------. 1 boinc boinc       357 Oct 18 08:12 output.list
[2025-10-18 08:12:33] -rw-r--r--. 1 boinc boinc       620 Oct 18 08:12 runtime_log
[2025-10-18 08:12:33] -rw-------. 1 boinc boinc    665600 Oct 18 08:12 result.tar.gz
[2025-10-18 08:12:33] -rw-------. 1 boinc boinc       652 Oct 18 08:12 WqpKDmz5IR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtBcNDmQjQpin.diag
[2025-10-18 08:12:33] -rw-r--r--. 1 boinc boinc      8727 Oct 18 08:12 runtime_log.err
[2025-10-18 08:12:33] -rw-r--r--. 1 boinc boinc     21624 Oct 18 08:12 stderr.txt
[2025-10-18 08:12:33] HITS file was successfully produced:
[2025-10-18 08:12:33] -rw-------. 1 boinc boinc 194776940 Oct 18 08:11 shared/HITS.pool.root.1
[2025-10-18 08:12:33]  *** Contents of shared directory: ***
[2025-10-18 08:12:33] total 407104
[2025-10-18 08:12:33] -rw-r--r--. 2 boinc boinc     15120 Oct 18 07:42 start_atlas.sh
[2025-10-18 08:12:33] -rw-r--r--. 2 boinc boinc    569673 Oct 18 07:42 input.tar.gz
[2025-10-18 08:12:33] -rw-r--r--. 2 boinc boinc 220838098 Oct 18 07:42 ATLAS.root_0
[2025-10-18 08:12:33] -rw-------. 1 boinc boinc 194776940 Oct 18 08:11 HITS.pool.root.1
[2025-10-18 08:12:33] -rw-------. 1 boinc boinc    665600 Oct 18 08:12 result.tar.gz
08:12:35 (2323016): run_atlas exited; CPU time 18740.359169
08:12:35 (2323016): called boinc_finish(0)

</stderr_txt>
]]>

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