Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:01:34 (15233): wrapper (7.7.26015): starting
08:01:34 (15233): wrapper: running run_atlas (--nthreads 8)
[2025-10-18 08:01:34] Arguments: --nthreads 8
[2025-10-18 08:01:34] Threads: 8
[2025-10-18 08:01:34] Checking for CVMFS
[2025-10-18 08:01:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 08:01:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 08:01:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 08:01:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 08:01:34] 2.11.2.0 2876 9531 77640 151850 2 57 18855193 20275201 1 130560 0 5229378 99.967 634735 39515 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 08:01:34] CVMFS is ok
[2025-10-18 08:01:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 08:01:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 08:01:34] Further information can be found at the LHC@home message board.
[2025-10-18 08:01:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 08:01:34] Checking for apptainer binary...
[2025-10-18 08:01:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 08:01:34] Running /usr/bin/apptainer --version
[2025-10-18 08:01:34] apptainer version 1.3.2-1.el7
[2025-10-18 08:01:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 08:01:36] c-204-40.aglt2.org
[2025-10-18 08:01:36] apptainer works
[2025-10-18 08:01:36] Set ATHENA_PROC_NUMBER=8
[2025-10-18 08:01:36] Set ATHENA_CORE_NUMBER=8
[2025-10-18 08:01:36] Starting ATLAS job with PandaID=6848023768
[2025-10-18 08:01:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 10:33:14]  *** The last 200 lines of the pilot log: ***
[2025-10-18 10:33:14] 2025-10-18 14:32:27,335 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 10:33:14] 2025-10-18 14:32:27,335 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 10:33:14] 2025-10-18 14:32:27,335 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 10:33:14] 2025-10-18 14:32:27,338 | INFO     | fitting pss+swap vs Time
[2025-10-18 10:33:14] 2025-10-18 14:32:27,339 | INFO     | sum of square deviations: 1005179777.0
[2025-10-18 10:33:14] 2025-10-18 14:32:27,339 | INFO     | sum of deviations: 11983376129.000006
[2025-10-18 10:33:14] 2025-10-18 14:32:27,339 | INFO     | mean x: 1760793428.5
[2025-10-18 10:33:14] 2025-10-18 14:32:27,340 | INFO     | mean y: 2487765.756756757
[2025-10-18 10:33:14] 2025-10-18 14:32:27,340 | INFO     | -- intersect: -20989030788.42818
[2025-10-18 10:33:14] 2025-10-18 14:32:27,340 | INFO     | intersect: -20989030788.42818
[2025-10-18 10:33:14] 2025-10-18 14:32:27,340 | INFO     | chi2: 2.1533934536185155
[2025-10-18 10:33:14] 2025-10-18 14:32:27,340 | INFO     | sum of square deviations: 906703512.0
[2025-10-18 10:33:14] 2025-10-18 14:32:27,341 | INFO     | sum of deviations: 21412680611.000004
[2025-10-18 10:33:14] 2025-10-18 14:32:27,341 | INFO     | mean x: 1760793276.0
[2025-10-18 10:33:14] 2025-10-18 14:32:27,341 | INFO     | mean y: 2501951.685314685
[2025-10-18 10:33:14] 2025-10-18 14:32:27,342 | INFO     | -- intersect: -41580334711.00578
[2025-10-18 10:33:14] 2025-10-18 14:32:27,342 | INFO     | intersect: -41580334711.00578
[2025-10-18 10:33:14] 2025-10-18 14:32:27,342 | INFO     | chi2: 1.3806838022289134
[2025-10-18 10:33:14] 2025-10-18 14:32:27,342 | INFO     | current chi2=1.3806838022289134 (change=35.88334728570655 %)
[2025-10-18 10:33:14] 2025-10-18 14:32:27,342 | INFO     | sum of square deviations: 814878534.5
[2025-10-18 10:33:14] 2025-10-18 14:32:27,343 | INFO     | sum of deviations: 20832457425.499996
[2025-10-18 10:33:14] 2025-10-18 14:32:27,343 | INFO     | mean x: 1760793123.5
[2025-10-18 10:33:14] 2025-10-18 14:32:27,343 | INFO     | mean y: 2500987.65942029
[2025-10-18 10:33:14] 2025-10-18 14:32:27,344 | INFO     | -- intersect: -45012364697.73299
[2025-10-18 10:33:14] 2025-10-18 14:32:27,344 | INFO     | intersect: -45012364697.73299
[2025-10-18 10:33:14] 2025-10-18 14:32:27,344 | INFO     | chi2: 1.38109174627957
[2025-10-18 10:33:14] 2025-10-18 14:32:27,344 | INFO     | current chi2=1.38109174627957 (change=-0.029546522527317046 %)
[2025-10-18 10:33:14] 2025-10-18 14:32:27,344 | INFO     | right removable region: 137
[2025-10-18 10:33:14] 2025-10-18 14:32:27,345 | INFO     | sum of square deviations: 906703512.0
[2025-10-18 10:33:14] 2025-10-18 14:32:27,345 | INFO     | sum of deviations: -9042444983.0
[2025-10-18 10:33:14] 2025-10-18 14:32:27,345 | INFO     | mean x: 1760793581.0
[2025-10-18 10:33:14] 2025-10-18 14:32:27,345 | INFO     | mean y: 2519789.993006993
[2025-10-18 10:33:14] 2025-10-18 14:32:27,346 | INFO     | -- intersect: 17562702222.16611
[2025-10-18 10:33:14] 2025-10-18 14:32:27,346 | INFO     | intersect: 17562702222.16611
[2025-10-18 10:33:14] 2025-10-18 14:32:27,346 | INFO     | chi2: 0.8186504858494026
[2025-10-18 10:33:14] 2025-10-18 14:32:27,346 | INFO     | current chi2=0.8186504858494026 (change=61.98323699397525 %)
[2025-10-18 10:33:14] 2025-10-18 14:32:27,346 | INFO     | sum of square deviations: 814878534.5
[2025-10-18 10:33:14] 2025-10-18 14:32:27,347 | INFO     | sum of deviations: -11084935280.500002
[2025-10-18 10:33:14] 2025-10-18 14:32:27,347 | INFO     | mean x: 1760793733.5
[2025-10-18 10:33:14] 2025-10-18 14:32:27,347 | INFO     | mean y: 2523180.920289855
[2025-10-18 10:33:14] 2025-10-18 14:32:27,347 | INFO     | -- intersect: 23954908416.01997
[2025-10-18 10:33:14] 2025-10-18 14:32:27,348 | INFO     | intersect: 23954908416.01997
[2025-10-18 10:33:14] 2025-10-18 14:32:27,348 | INFO     | chi2: 0.8083719753961774
[2025-10-18 10:33:14] 2025-10-18 14:32:27,348 | INFO     | current chi2=0.8083719753961774 (change=1.2555431934497085 %)
[2025-10-18 10:33:14] 2025-10-18 14:32:27,348 | INFO     | left removable region: 20
[2025-10-18 10:33:14] 2025-10-18 14:32:27,348 | INFO     | sum of square deviations: 496597218.0
[2025-10-18 10:33:14] 2025-10-18 14:32:27,349 | INFO     | sum of deviations: -2956350604.0
[2025-10-18 10:33:14] 2025-10-18 14:32:27,349 | INFO     | mean x: 1760793703.0
[2025-10-18 10:33:14] 2025-10-18 14:32:27,349 | INFO     | mean y: 2543874.512820513
[2025-10-18 10:33:14] 2025-10-18 14:32:27,349 | INFO     | -- intersect: 10484929475.358952
[2025-10-18 10:33:14] 2025-10-18 14:32:27,349 | INFO     | intersect: 10484929475.358952
[2025-10-18 10:33:14] 2025-10-18 14:32:27,350 | INFO     | chi2: 0.002802244345484769
[2025-10-18 10:33:14] 2025-10-18 14:32:27,350 | INFO     | -- intersect: 10484929475.358952
[2025-10-18 10:33:14] 2025-10-18 14:32:27,350 | INFO     | current memory leak: -5.95 B/s (using 117 data points, chi2=0.00)
[2025-10-18 10:33:14] 2025-10-18 14:32:27,350 | INFO     | could have reported an average CPU frequency of 2003 MHz (8 samples)
[2025-10-18 10:33:14] 2025-10-18 14:32:27,351 | INFO     | ..............................
[2025-10-18 10:33:14] 2025-10-18 14:32:27,351 | INFO     | . Timing measurements:
[2025-10-18 10:33:14] 2025-10-18 14:32:27,351 | INFO     | . get job = 0 s
[2025-10-18 10:33:14] 2025-10-18 14:32:27,351 | INFO     | . initial setup = 2 s
[2025-10-18 10:33:14] 2025-10-18 14:32:27,351 | INFO     | . payload setup = 8 s
[2025-10-18 10:33:14] 2025-10-18 14:32:27,351 | INFO     | . stage-in = 0 s
[2025-10-18 10:33:14] 2025-10-18 14:32:27,351 | INFO     | . payload execution = 8993 s
[2025-10-18 10:33:14] 2025-10-18 14:32:27,351 | INFO     | . stage-out = 0 s
[2025-10-18 10:33:14] 2025-10-18 14:32:27,351 | INFO     | . log creation = 0 s
[2025-10-18 10:33:14] 2025-10-18 14:32:27,352 | INFO     | ..............................
[2025-10-18 10:33:14] 2025-10-18 14:32:27,442 | INFO     | 
[2025-10-18 10:33:14] 2025-10-18 14:32:27,442 | INFO     | job summary report
[2025-10-18 10:33:14] 2025-10-18 14:32:27,443 | INFO     | --------------------------------------------------
[2025-10-18 10:33:14] 2025-10-18 14:32:27,443 | INFO     | PanDA job id: 6848023768
[2025-10-18 10:33:14] 2025-10-18 14:32:27,443 | INFO     | task id: 46771637
[2025-10-18 10:33:14] 2025-10-18 14:32:27,443 | INFO     | errors: (none)
[2025-10-18 10:33:14] 2025-10-18 14:32:27,443 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 10:33:14] 2025-10-18 14:32:27,443 | INFO     | pilot state: finished 
[2025-10-18 10:33:14] 2025-10-18 14:32:27,443 | INFO     | transexitcode: 0
[2025-10-18 10:33:14] 2025-10-18 14:32:27,443 | INFO     | exeerrorcode: 0
[2025-10-18 10:33:14] 2025-10-18 14:32:27,443 | INFO     | exeerrordiag: 
[2025-10-18 10:33:14] 2025-10-18 14:32:27,444 | INFO     | exitcode: 0
[2025-10-18 10:33:14] 2025-10-18 14:32:27,444 | INFO     | exitmsg: OK
[2025-10-18 10:33:14] 2025-10-18 14:32:27,444 | INFO     | cpuconsumptiontime: 65327 s
[2025-10-18 10:33:14] 2025-10-18 14:32:27,444 | INFO     | nevents: 400
[2025-10-18 10:33:14] 2025-10-18 14:32:27,444 | INFO     | neventsw: 0
[2025-10-18 10:33:14] 2025-10-18 14:32:27,444 | INFO     | pid: 26064
[2025-10-18 10:33:14] 2025-10-18 14:32:27,444 | INFO     | pgrp: 26064
[2025-10-18 10:33:14] 2025-10-18 14:32:27,444 | INFO     | corecount: 8
[2025-10-18 10:33:14] 2025-10-18 14:32:27,445 | INFO     | event service: False
[2025-10-18 10:33:14] 2025-10-18 14:32:27,445 | INFO     | sizes: {0: 2348758, 1: 2348957, 6: 2349219, 11: 2349247, 9006: 2377457, 9008: 2386455, 9011: 2386639, 9017: 2386833}
[2025-10-18 10:33:14] 2025-10-18 14:32:27,445 | INFO     | --------------------------------------------------
[2025-10-18 10:33:14] 2025-10-18 14:32:27,445 | INFO     | 
[2025-10-18 10:33:14] 2025-10-18 14:32:27,445 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 10:33:14] 2025-10-18 14:32:27,471 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,472 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,472 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,472 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,472 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,472 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,475 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 10:33:14] 2025-10-18 14:32:27,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,475 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 10:33:14] 2025-10-18 14:32:27,475 | INFO     | job 6848023768 has completed (purged errors)
[2025-10-18 10:33:14] 2025-10-18 14:32:27,475 | INFO     | overall cleanup function is called
[2025-10-18 10:33:14] 2025-10-18 14:32:28,483 | INFO     | --- collectZombieJob: --- 10, [26064]
[2025-10-18 10:33:14] 2025-10-18 14:32:28,484 | INFO     | zombie collector waiting for pid 26064
[2025-10-18 10:33:14] 2025-10-18 14:32:28,484 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 10:33:14] 2025-10-18 14:32:28,484 | INFO     | collected zombie processes
[2025-10-18 10:33:14] 2025-10-18 14:32:28,484 | INFO     | will attempt to kill all subprocesses of pid=26064
[2025-10-18 10:33:14] 2025-10-18 14:32:28,578 | INFO     | process IDs to be killed: [26064] (in reverse order)
[2025-10-18 10:33:14] 2025-10-18 14:32:28,630 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 10:33:14] 2025-10-18 14:32:28,631 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 10:33:14] 2025-10-18 14:32:28,635 | INFO     | did not find any defunct processes belonging to 26064
[2025-10-18 10:33:14] 2025-10-18 14:32:28,638 | INFO     | did not find any defunct processes belonging to 26064
[2025-10-18 10:33:14] 2025-10-18 14:32:28,638 | INFO     | ready for new job
[2025-10-18 10:33:14] 2025-10-18 14:32:28,638 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 10:33:14] 2025-10-18 14:32:28,641 | INFO     | ***************************************
[2025-10-18 10:33:14] 2025-10-18 14:32:28,641 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 10:33:14] 2025-10-18 14:32:28,641 | INFO     | ***************************************
[2025-10-18 10:33:14] 2025-10-18 14:32:28,641 | INFO     | 
[2025-10-18 10:33:14] 2025-10-18 14:32:28,641 | INFO     | architecture information:
[2025-10-18 10:33:14] 2025-10-18 14:32:28,642 | INFO     | executing command: cat /etc/os-release
[2025-10-18 10:33:14] 2025-10-18 14:32:28,659 | INFO     | cat /etc/os-release:
[2025-10-18 10:33:14] NAME="CentOS Linux"
[2025-10-18 10:33:14] VERSION="7 (Core)"
[2025-10-18 10:33:14] ID="centos"
[2025-10-18 10:33:14] ID_LIKE="rhel fedora"
[2025-10-18 10:33:14] VERSION_ID="7"
[2025-10-18 10:33:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 10:33:14] ANSI_COLOR="0;31"
[2025-10-18 10:33:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 10:33:14] HOME_URL="https://www.centos.org/"
[2025-10-18 10:33:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 10:33:14] 
[2025-10-18 10:33:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 10:33:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 10:33:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 10:33:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 10:33:14] 
[2025-10-18 10:33:14] 2025-10-18 14:32:28,659 | INFO     | ***************************************
[2025-10-18 10:33:14] 2025-10-18 14:32:29,163 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 10:33:14] 2025-10-18 14:32:29,182 | INFO     | sufficient remaining disk space (18514706432 B)
[2025-10-18 10:33:14] 2025-10-18 14:32:29,183 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 10:33:14] 2025-10-18 14:32:29,183 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 10:33:14] 2025-10-18 14:32:29,183 | INFO     | update_server=False
[2025-10-18 10:33:14] 2025-10-18 14:32:29,183 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 10:33:14] 2025-10-18 14:32:29,184 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 10:33:14] 2025-10-18 14:32:29,275 | INFO     | all job control threads have been joined
[2025-10-18 10:33:14] 2025-10-18 14:32:29,344 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 10:33:14] 2025-10-18 14:32:29,372 | INFO     | all payload control threads have been joined
[2025-10-18 10:33:14] 2025-10-18 14:32:29,921 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 10:33:14] 2025-10-18 14:32:29,922 | INFO     | aborting loop
[2025-10-18 10:33:14] 2025-10-18 14:32:30,071 | INFO     | all data control threads have been joined
[2025-10-18 10:33:14] 2025-10-18 14:32:30,189 | INFO     | [job] retrieve thread has finished
[2025-10-18 10:33:14] 2025-10-18 14:32:30,190 | INFO     | [job] queue monitor thread has finished
[2025-10-18 10:33:14] 2025-10-18 14:32:30,281 | INFO     | [job] control thread has finished
[2025-10-18 10:33:14] 2025-10-18 14:32:30,378 | INFO     | [payload] control thread has finished
[2025-10-18 10:33:14] 2025-10-18 14:32:30,471 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 10:33:14] 2025-10-18 14:32:30,472 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 10:33:14] 2025-10-18 14:32:30,549 | INFO     | [payload] validate_post thread has finished
[2025-10-18 10:33:14] 2025-10-18 14:32:30,922 | INFO     | [job] job monitor thread has finished
[2025-10-18 10:33:14] 2025-10-18 14:32:30,938 | INFO     | [payload] failed_post thread has finished
[2025-10-18 10:33:14] 2025-10-18 14:32:31,074 | INFO     | [data] control thread has finished
[2025-10-18 10:33:14] 2025-10-18 14:32:31,111 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 10:33:14] 2025-10-18 14:32:31,350 | INFO     | [data] copytool_out thread has finished
[2025-10-18 10:33:14] 2025-10-18 14:32:31,350 | INFO     | [data] copytool_in thread has finished
[2025-10-18 10:33:14] 2025-10-18 14:32:31,399 | INFO     | [job] validate thread has finished
[2025-10-18 10:33:14] 2025-10-18 14:32:31,991 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 10:33:14] 2025-10-18 14:32:35,997 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 10:33:14] 2025-10-18 14:32:40,056 | INFO     | job.realtimelogging is not enabled
[2025-10-18 10:33:14] 2025-10-18 14:32:41,057 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 10:33:14] 2025-10-18 14:32:59,950 | INFO     | PID=19589 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 10:33:14] 2025-10-18 14:32:59,950 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 10:33:14] 2025-10-18 14:32:59,950 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 10:33:14] 2025-10-18 14:32:59,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 10:33:14] 2025-10-18 14:33:07,971 | INFO     | [monitor] cgroup control has ended
[2025-10-18 10:33:14] 2025-10-18 14:33:08,977 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140596598826816)>', '<ExcThread(monitor, started 140595855079168)>']
[2025-10-18 10:33:14] 2025-10-18 14:33:08,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 10:33:14] 2025-10-18 14:33:08,991 | INFO     | [monitor] control thread has ended
[2025-10-18 10:33:14] 2025-10-18 14:33:14,003 | INFO     | all workflow threads have been joined
[2025-10-18 10:33:14] 2025-10-18 14:33:14,003 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 10:33:14] 2025-10-18 14:33:14,003 | INFO     | traces error code: 0
[2025-10-18 10:33:14] 2025-10-18 14:33:14,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 10:33:14] 2025-10-18 14:33:14,115 [wrapper] ==== pilot stdout END ====
[2025-10-18 10:33:14] 2025-10-18 14:33:14,120 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 10:33:14] 2025-10-18 14:33:14,125 [wrapper] pilotpid: 19589
[2025-10-18 10:33:14] 2025-10-18 14:33:14,130 [wrapper] Pilot exit status: 0
[2025-10-18 10:33:14] 2025-10-18 14:33:14,148 [wrapper] pandaids: 6848023768
[2025-10-18 10:33:14] 2025-10-18 14:33:14,199 [wrapper] cleanup supervisor_pilot 15162 19590
[2025-10-18 10:33:14] 2025-10-18 14:33:14,205 [wrapper] Test setup, not cleaning
[2025-10-18 10:33:14] 2025-10-18 14:33:14,210 [wrapper] apfmon messages muted
[2025-10-18 10:33:14] 2025-10-18 14:33:14,214 [wrapper] ==== wrapper stdout END ====
[2025-10-18 10:33:14] 2025-10-18 14:33:14,219 [wrapper] ==== wrapper stderr END ====
[2025-10-18 10:33:14]  *** Error codes and diagnostics ***
[2025-10-18 10:33:14]     "exeErrorCode": 0,
[2025-10-18 10:33:14]     "exeErrorDiag": "",
[2025-10-18 10:33:14]     "pilotErrorCode": 0,
[2025-10-18 10:33:14]     "pilotErrorDiag": "",
[2025-10-18 10:33:14]  *** Listing of results directory ***
[2025-10-18 10:33:14] total 442968
[2025-10-18 10:33:14] -rw-r--r-- 1 boincer umatlas    557409 Oct 18 02:39 pilot3.tar.gz
[2025-10-18 10:33:14] -rwx------ 1 boincer umatlas     36292 Oct 18 02:51 runpilot2-wrapper.sh
[2025-10-18 10:33:14] -rw-r--r-- 1 boincer umatlas      5112 Oct 18 02:51 queuedata.json
[2025-10-18 10:33:14] -rw-r--r-- 1 boincer umatlas       100 Oct 18 08:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 10:33:14] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 08:01 run_atlas
[2025-10-18 10:33:14] -rw-r--r-- 1 boincer umatlas       105 Oct 18 08:01 job.xml
[2025-10-18 10:33:14] -rw-r--r-- 2 boincer umatlas 227447547 Oct 18 08:01 EVNT.46771634._001686.pool.root.1
[2025-10-18 10:33:14] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 08:01 start_atlas.sh
[2025-10-18 10:33:14] drwxrwx--x 2 boincer umatlas      4096 Oct 18 08:01 shared
[2025-10-18 10:33:14] -rw-r--r-- 2 boincer umatlas    569668 Oct 18 08:01 input.tar.gz
[2025-10-18 10:33:14] -rw-r--r-- 1 boincer umatlas         0 Oct 18 08:01 boinc_lockfile
[2025-10-18 10:33:14] -rw-r--r-- 1 boincer umatlas      2558 Oct 18 08:01 pandaJob.out
[2025-10-18 10:33:14] -rw------- 1 boincer umatlas    976750 Oct 18 08:01 agis_schedconf.cvmfs.json
[2025-10-18 10:33:14] -rw------- 1 boincer umatlas   1560740 Oct 18 08:01 agis_ddmendpoints.agis.ALL.json
[2025-10-18 10:33:14] drwx------ 5 boincer umatlas      4096 Oct 18 08:01 pilot3
[2025-10-18 10:33:14] -rw-r--r-- 1 boincer umatlas      5910 Oct 18 10:28 init_data.xml
[2025-10-18 10:33:14] -rw------- 1 boincer umatlas 218971263 Oct 18 10:31 HITS.46771637._038696.pool.root.1
[2025-10-18 10:33:14] -rw------- 1 boincer umatlas        95 Oct 18 10:32 pilot_heartbeat.json
[2025-10-18 10:33:14] -rw-r--r-- 1 boincer umatlas       529 Oct 18 10:32 boinc_task_state.xml
[2025-10-18 10:33:14] -rw------- 1 boincer umatlas      1051 Oct 18 10:32 memory_monitor_summary.json
[2025-10-18 10:33:14] -rw------- 1 boincer umatlas    378521 Oct 18 10:32 log.46771637._038696.job.log.tgz.1
[2025-10-18 10:33:14] -rw------- 1 boincer umatlas      7852 Oct 18 10:32 heartbeat.json
[2025-10-18 10:33:14] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 10:33 boinc_mmap_file
[2025-10-18 10:33:14] -rw-r--r-- 1 boincer umatlas        27 Oct 18 10:33 wrapper_checkpoint.txt
[2025-10-18 10:33:14] -rw------- 1 boincer umatlas      4818 Oct 18 10:33 pilotlog.txt
[2025-10-18 10:33:14] -rw------- 1 boincer umatlas   1261230 Oct 18 10:33 log.46771637._038696.job.log.1
[2025-10-18 10:33:14] -rw------- 1 boincer umatlas       357 Oct 18 10:33 output.list
[2025-10-18 10:33:14] -rw-r--r-- 1 boincer umatlas       620 Oct 18 10:33 runtime_log
[2025-10-18 10:33:14] -rw------- 1 boincer umatlas   1658880 Oct 18 10:33 result.tar.gz
[2025-10-18 10:33:14] -rw-r--r-- 1 boincer umatlas      8703 Oct 18 10:33 runtime_log.err
[2025-10-18 10:33:14] -rw------- 1 boincer umatlas       660 Oct 18 10:33 34bMDmjxFU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQQwNDmuw61Vn.diag
[2025-10-18 10:33:14] -rw-r--r-- 1 boincer umatlas     20850 Oct 18 10:33 stderr.txt
[2025-10-18 10:33:14] HITS file was successfully produced:
[2025-10-18 10:33:14] -rw------- 1 boincer umatlas 218971263 Oct 18 10:31 shared/HITS.pool.root.1
[2025-10-18 10:33:14]  *** Contents of shared directory: ***
[2025-10-18 10:33:14] total 438160
[2025-10-18 10:33:14] -rw-r--r-- 2 boincer umatlas 227447547 Oct 18 08:01 ATLAS.root_0
[2025-10-18 10:33:14] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 08:01 start_atlas.sh
[2025-10-18 10:33:14] -rw-r--r-- 2 boincer umatlas    569668 Oct 18 08:01 input.tar.gz
[2025-10-18 10:33:14] -rw------- 1 boincer umatlas 218971263 Oct 18 10:31 HITS.pool.root.1
[2025-10-18 10:33:14] -rw------- 1 boincer umatlas   1658880 Oct 18 10:33 result.tar.gz
10:33:16 (15233): run_atlas exited; CPU time 65258.957490
10:33:16 (15233): called boinc_finish(0)

</stderr_txt>
]]>

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