Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:50:25 (609632): wrapper (7.7.26015): starting
15:50:25 (609632): wrapper: running run_atlas (--nthreads 8)
[2025-10-18 15:50:25] Arguments: --nthreads 8
[2025-10-18 15:50:25] Threads: 8
[2025-10-18 15:50:25] Checking for CVMFS
[2025-10-18 15:50:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 15:50:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 15:50:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 15:50:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 15:50:29] 2.13.2.0 941838 147170 301328 151862 3 675 30169092 32935937 23301 16776704 0 131039225 99.720 102957610 29918 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-18 15:50:29] CVMFS is ok
[2025-10-18 15:50:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 15:50:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 15:50:29] Further information can be found at the LHC@home message board.
[2025-10-18 15:50:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 15:50:29] Checking for apptainer binary...
[2025-10-18 15:50:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 15:50:29] Running /usr/bin/apptainer --version
[2025-10-18 15:50:29] apptainer version 1.4.3-1.el9
[2025-10-18 15:50:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 15:50:31] c-6-7.aglt2.org
[2025-10-18 15:50:31] apptainer works
[2025-10-18 15:50:31] Set ATHENA_PROC_NUMBER=8
[2025-10-18 15:50:31] Set ATHENA_CORE_NUMBER=8
[2025-10-18 15:50:31] Starting ATLAS job with PandaID=6848023722
[2025-10-18 15:50:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 22:16:56]  *** The last 200 lines of the pilot log: ***
[2025-10-18 22:16:56] 2025-10-19 02:16:17,714 | INFO     | monitor loop #1262: job 0:6848023722 is in state 'finished'
[2025-10-18 22:16:56] 2025-10-19 02:16:17,714 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 22:16:56] 2025-10-19 02:16:18,125 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-18 22:16:56] 2025-10-19 02:16:18,132 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.192324999999
[2025-10-18 22:16:56] 2025-10-19 02:16:18,138 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6848023722/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 22:16:56] 2025-10-19 02:16:18,139 | INFO     | extracted standard info from prmon json
[2025-10-18 22:16:56] 2025-10-19 02:16:18,139 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 22:16:56] 2025-10-19 02:16:18,139 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 22:16:56] 2025-10-19 02:16:18,140 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 22:16:56] 2025-10-19 02:16:18,140 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 22:16:56] 2025-10-19 02:16:18,147 | INFO     | fitting pss+swap vs Time
[2025-10-18 22:16:56] 2025-10-19 02:16:18,147 | INFO     | sum of square deviations: 16349430044.933334
[2025-10-18 22:16:56] 2025-10-19 02:16:18,151 | INFO     | sum of deviations: 120754053357.3733
[2025-10-18 22:16:56] 2025-10-19 02:16:18,152 | INFO     | mean x: 1760828733.3866668
[2025-10-18 22:16:56] 2025-10-19 02:16:18,152 | INFO     | mean y: 2118660.114666667
[2025-10-18 22:16:56] 2025-10-19 02:16:18,152 | INFO     | -- intersect: -13003056825.526346
[2025-10-18 22:16:56] 2025-10-19 02:16:18,152 | INFO     | intersect: -13003056825.526346
[2025-10-18 22:16:56] 2025-10-19 02:16:18,153 | INFO     | chi2: 3.6769554368341812
[2025-10-18 22:16:56] 2025-10-19 02:16:18,153 | INFO     | sum of square deviations: 15704167736.497368
[2025-10-18 22:16:56] 2025-10-19 02:16:18,157 | INFO     | sum of deviations: 144653272557.51874
[2025-10-18 22:16:56] 2025-10-19 02:16:18,157 | INFO     | mean x: 1760828580.9027028
[2025-10-18 22:16:56] 2025-10-19 02:16:18,157 | INFO     | mean y: 2124257.6810810813
[2025-10-18 22:16:56] 2025-10-19 02:16:18,157 | INFO     | -- intersect: -16217112629.889097
[2025-10-18 22:16:56] 2025-10-19 02:16:18,157 | INFO     | intersect: -16217112629.889097
[2025-10-18 22:16:56] 2025-10-19 02:16:18,158 | INFO     | chi2: 2.9819163087381737
[2025-10-18 22:16:56] 2025-10-19 02:16:18,158 | INFO     | current chi2=2.9819163087381737 (change=18.90257143541638 %)
[2025-10-18 22:16:56] 2025-10-19 02:16:18,158 | INFO     | right removable region: 369
[2025-10-18 22:16:56] 2025-10-19 02:16:18,159 | INFO     | sum of square deviations: 15703896164.497375
[2025-10-18 22:16:56] 2025-10-19 02:16:18,162 | INFO     | sum of deviations: 41854636335.85414
[2025-10-18 22:16:56] 2025-10-19 02:16:18,162 | INFO     | mean x: 1760828885.9027028
[2025-10-18 22:16:56] 2025-10-19 02:16:18,162 | INFO     | mean y: 2137256.745945946
[2025-10-18 22:16:56] 2025-10-19 02:16:18,163 | INFO     | -- intersect: -4690892542.810403
[2025-10-18 22:16:56] 2025-10-19 02:16:18,163 | INFO     | intersect: -4690892542.810403
[2025-10-18 22:16:56] 2025-10-19 02:16:18,163 | INFO     | chi2: 1.302837056287256
[2025-10-18 22:16:56] 2025-10-19 02:16:18,163 | INFO     | current chi2=1.302837056287256 (change=64.56750486459568 %)
[2025-10-18 22:16:56] 2025-10-19 02:16:18,164 | INFO     | sum of square deviations: 15075594480.701288
[2025-10-18 22:16:56] 2025-10-19 02:16:18,167 | INFO     | sum of deviations: 15599422607.969864
[2025-10-18 22:16:56] 2025-10-19 02:16:18,168 | INFO     | mean x: 1760829038.4164383
[2025-10-18 22:16:56] 2025-10-19 02:16:18,168 | INFO     | mean y: 2143621.6383561646
[2025-10-18 22:16:56] 2025-10-19 02:16:18,168 | INFO     | -- intersect: -1819868528.251037
[2025-10-18 22:16:56] 2025-10-19 02:16:18,168 | INFO     | intersect: -1819868528.251037
[2025-10-18 22:16:56] 2025-10-19 02:16:18,169 | INFO     | chi2: 1.0742176804561505
[2025-10-18 22:16:56] 2025-10-19 02:16:18,169 | INFO     | current chi2=1.0742176804561505 (change=17.54781035186478 %)
[2025-10-18 22:16:56] 2025-10-19 02:16:18,169 | INFO     | left removable region: 20
[2025-10-18 22:16:56] 2025-10-19 02:16:18,169 | INFO     | sum of square deviations: 13178552505.530077
[2025-10-18 22:16:56] 2025-10-19 02:16:18,173 | INFO     | sum of deviations: 57184659647.13755
[2025-10-18 22:16:56] 2025-10-19 02:16:18,173 | INFO     | mean x: 1760829160.4297993
[2025-10-18 22:16:56] 2025-10-19 02:16:18,173 | INFO     | mean y: 2146909.6790830945
[2025-10-18 22:16:56] 2025-10-19 02:16:18,173 | INFO     | -- intersect: -7638481011.610435
[2025-10-18 22:16:56] 2025-10-19 02:16:18,173 | INFO     | intersect: -7638481011.610435
[2025-10-18 22:16:56] 2025-10-19 02:16:18,174 | INFO     | chi2: 0.2038402857071808
[2025-10-18 22:16:56] 2025-10-19 02:16:18,174 | INFO     | -- intersect: -7638481011.610435
[2025-10-18 22:16:56] 2025-10-19 02:16:18,174 | INFO     | current memory leak: 4.34 B/s (using 349 data points, chi2=0.20)
[2025-10-18 22:16:56] 2025-10-19 02:16:18,175 | INFO     | could have reported an average CPU frequency of 2600 MHz (16 samples)
[2025-10-18 22:16:56] 2025-10-19 02:16:18,175 | INFO     | ..............................
[2025-10-18 22:16:56] 2025-10-19 02:16:18,175 | INFO     | . Timing measurements:
[2025-10-18 22:16:56] 2025-10-19 02:16:18,175 | INFO     | . get job = 0 s
[2025-10-18 22:16:56] 2025-10-19 02:16:18,175 | INFO     | . initial setup = 5 s
[2025-10-18 22:16:56] 2025-10-19 02:16:18,176 | INFO     | . payload setup = 54 s
[2025-10-18 22:16:56] 2025-10-19 02:16:18,176 | INFO     | . stage-in = 1 s
[2025-10-18 22:16:56] 2025-10-19 02:16:18,176 | INFO     | . payload execution = 22874 s
[2025-10-18 22:16:56] 2025-10-19 02:16:18,176 | INFO     | . stage-out = 3 s
[2025-10-18 22:16:56] 2025-10-19 02:16:18,176 | INFO     | . log creation = 0 s
[2025-10-18 22:16:56] 2025-10-19 02:16:18,176 | INFO     | ..............................
[2025-10-18 22:16:56] 2025-10-19 02:16:18,594 | INFO     | 
[2025-10-18 22:16:56] 2025-10-19 02:16:18,594 | INFO     | job summary report
[2025-10-18 22:16:56] 2025-10-19 02:16:18,594 | INFO     | --------------------------------------------------
[2025-10-18 22:16:56] 2025-10-19 02:16:18,595 | INFO     | PanDA job id: 6848023722
[2025-10-18 22:16:56] 2025-10-19 02:16:18,595 | INFO     | task id: 46771637
[2025-10-18 22:16:56] 2025-10-19 02:16:18,595 | INFO     | errors: (none)
[2025-10-18 22:16:56] 2025-10-19 02:16:18,595 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 22:16:56] 2025-10-19 02:16:18,595 | INFO     | pilot state: finished 
[2025-10-18 22:16:56] 2025-10-19 02:16:18,595 | INFO     | transexitcode: 0
[2025-10-18 22:16:56] 2025-10-19 02:16:18,595 | INFO     | exeerrorcode: 0
[2025-10-18 22:16:56] 2025-10-19 02:16:18,595 | INFO     | exeerrordiag: 
[2025-10-18 22:16:56] 2025-10-19 02:16:18,595 | INFO     | exitcode: 0
[2025-10-18 22:16:56] 2025-10-19 02:16:18,595 | INFO     | exitmsg: OK
[2025-10-18 22:16:56] 2025-10-19 02:16:18,596 | INFO     | cpuconsumptiontime: 55872 s
[2025-10-18 22:16:56] 2025-10-19 02:16:18,596 | INFO     | nevents: 400
[2025-10-18 22:16:56] 2025-10-19 02:16:18,596 | INFO     | neventsw: 0
[2025-10-18 22:16:56] 2025-10-19 02:16:18,596 | INFO     | pid: 648078
[2025-10-18 22:16:56] 2025-10-19 02:16:18,596 | INFO     | pgrp: 648078
[2025-10-18 22:16:56] 2025-10-19 02:16:18,596 | INFO     | corecount: 8
[2025-10-18 22:16:56] 2025-10-19 02:16:18,596 | INFO     | event service: False
[2025-10-18 22:16:56] 2025-10-19 02:16:18,596 | INFO     | sizes: {0: 2348101, 1: 2348702, 2: 2348814, 3: 2348985, 4: 2349013, 15: 2349041, 27: 2349197, 38: 2349225, 49: 2349253, 53: 2349543, 60: 2349571, 22933: 2384255, 2
[2025-10-18 22:16:56] 2025-10-19 02:16:18,596 | INFO     | --------------------------------------------------
[2025-10-18 22:16:56] 2025-10-19 02:16:18,596 | INFO     | 
[2025-10-18 22:16:56] 2025-10-19 02:16:18,597 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 22:16:56] 2025-10-19 02:16:18,653 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,654 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,654 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,654 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,654 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,654 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,654 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,654 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,654 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,655 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,655 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,655 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,655 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,655 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,655 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,655 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,655 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,656 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 22:16:56] 2025-10-19 02:16:18,656 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,656 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 22:16:56] 2025-10-19 02:16:18,656 | INFO     | job 6848023722 has completed (purged errors)
[2025-10-18 22:16:56] 2025-10-19 02:16:18,656 | INFO     | overall cleanup function is called
[2025-10-18 22:16:56] 2025-10-19 02:16:19,671 | INFO     | --- collectZombieJob: --- 10, [648078]
[2025-10-18 22:16:56] 2025-10-19 02:16:19,671 | INFO     | zombie collector waiting for pid 648078
[2025-10-18 22:16:56] 2025-10-19 02:16:19,671 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 22:16:56] 2025-10-19 02:16:19,671 | INFO     | collected zombie processes
[2025-10-18 22:16:56] 2025-10-19 02:16:19,672 | INFO     | will attempt to kill all subprocesses of pid=648078
[2025-10-18 22:16:56] 2025-10-19 02:16:20,697 | INFO     | process IDs to be killed: [648078] (in reverse order)
[2025-10-18 22:16:56] 2025-10-19 02:16:20,842 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 22:16:56] 2025-10-19 02:16:20,842 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 22:16:56] 2025-10-19 02:16:20,868 | INFO     | did not find any defunct processes belonging to 648078
[2025-10-18 22:16:56] 2025-10-19 02:16:20,899 | INFO     | did not find any defunct processes belonging to 648078
[2025-10-18 22:16:56] 2025-10-19 02:16:20,899 | INFO     | ready for new job
[2025-10-18 22:16:56] 2025-10-19 02:16:20,900 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 22:16:56] 2025-10-19 02:16:20,925 | INFO     | ***************************************
[2025-10-18 22:16:56] 2025-10-19 02:16:20,925 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 22:16:56] 2025-10-19 02:16:20,926 | INFO     | ***************************************
[2025-10-18 22:16:56] 2025-10-19 02:16:20,926 | INFO     | 
[2025-10-18 22:16:56] 2025-10-19 02:16:20,946 | INFO     | architecture information:
[2025-10-18 22:16:56] 2025-10-19 02:16:20,955 | INFO     | executing command: cat /etc/os-release
[2025-10-18 22:16:56] 2025-10-19 02:16:20,976 | INFO     | cat /etc/os-release:
[2025-10-18 22:16:56] NAME="CentOS Linux"
[2025-10-18 22:16:56] VERSION="7 (Core)"
[2025-10-18 22:16:56] ID="centos"
[2025-10-18 22:16:56] ID_LIKE="rhel fedora"
[2025-10-18 22:16:56] VERSION_ID="7"
[2025-10-18 22:16:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 22:16:56] ANSI_COLOR="0;31"
[2025-10-18 22:16:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 22:16:56] HOME_URL="https://www.centos.org/"
[2025-10-18 22:16:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 22:16:56] 
[2025-10-18 22:16:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 22:16:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 22:16:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 22:16:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 22:16:56] 
[2025-10-18 22:16:56] 2025-10-19 02:16:20,977 | INFO     | ***************************************
[2025-10-18 22:16:56] 2025-10-19 02:16:21,480 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 22:16:56] 2025-10-19 02:16:21,538 | INFO     | sufficient remaining disk space (75787927552 B)
[2025-10-18 22:16:56] 2025-10-19 02:16:21,539 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 22:16:56] 2025-10-19 02:16:21,539 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 22:16:56] 2025-10-19 02:16:21,539 | INFO     | update_server=False
[2025-10-18 22:16:56] 2025-10-19 02:16:21,539 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 22:16:56] 2025-10-19 02:16:21,540 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 22:16:56] 2025-10-19 02:16:21,540 | INFO     | aborting loop
[2025-10-18 22:16:56] 2025-10-19 02:16:21,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 22:16:56] 2025-10-19 02:16:22,017 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 22:16:56] 2025-10-19 02:16:22,123 | INFO     | all data control threads have been joined
[2025-10-18 22:16:56] 2025-10-19 02:16:22,427 | INFO     | all payload control threads have been joined
[2025-10-18 22:16:56] 2025-10-19 02:16:22,548 | INFO     | [job] retrieve thread has finished
[2025-10-18 22:16:56] 2025-10-19 02:16:22,557 | INFO     | [job] job monitor thread has finished
[2025-10-18 22:16:56] 2025-10-19 02:16:22,634 | INFO     | all job control threads have been joined
[2025-10-18 22:16:56] 2025-10-19 02:16:22,938 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 22:16:56] 2025-10-19 02:16:22,958 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 22:16:56] 2025-10-19 02:16:23,068 | INFO     | [job] validate thread has finished
[2025-10-18 22:16:56] 2025-10-19 02:16:23,096 | INFO     | [payload] validate_post thread has finished
[2025-10-18 22:16:56] 2025-10-19 02:16:23,129 | INFO     | [data] control thread has finished
[2025-10-18 22:16:56] 2025-10-19 02:16:23,161 | INFO     | [data] copytool_in thread has finished
[2025-10-18 22:16:56] 2025-10-19 02:16:23,318 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 22:16:56] 2025-10-19 02:16:23,435 | INFO     | [payload] control thread has finished
[2025-10-18 22:16:56] 2025-10-19 02:16:23,540 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 22:16:56] 2025-10-19 02:16:23,634 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 22:16:56] 2025-10-19 02:16:23,639 | INFO     | [job] control thread has finished
[2025-10-18 22:16:56] 2025-10-19 02:16:23,698 | INFO     | [data] copytool_out thread has finished
[2025-10-18 22:16:56] 2025-10-19 02:16:24,135 | INFO     | [payload] failed_post thread has finished
[2025-10-18 22:16:56] 2025-10-19 02:16:24,323 | INFO     | [job] queue monitor thread has finished
[2025-10-18 22:16:56] 2025-10-19 02:16:26,026 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 22:16:56] 2025-10-19 02:16:49,133 | INFO     | 23057s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-18 22:16:56] 2025-10-19 02:16:50,310 | INFO     | [monitor] cgroup control has ended
[2025-10-18 22:16:56] 2025-10-19 02:16:50,658 | INFO     | PID=624026 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-18 22:16:56] 2025-10-19 02:16:50,659 | INFO     | .. there are 24 such processes running
[2025-10-18 22:16:56] 2025-10-19 02:16:50,659 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 22:16:56] 2025-10-19 02:16:50,659 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 22:16:56] 2025-10-19 02:16:50,659 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 22:16:56] 2025-10-19 02:16:50,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140038328682304)>', '<ExcThread(monitor, started 140037526116096)>']
[2025-10-18 22:16:56] 2025-10-19 02:16:51,665 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 22:16:56] 2025-10-19 02:16:51,671 | INFO     | [monitor] control thread has ended
[2025-10-18 22:16:56] 2025-10-19 02:16:55,971 | INFO     | all workflow threads have been joined
[2025-10-18 22:16:56] 2025-10-19 02:16:55,971 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 22:16:56] 2025-10-19 02:16:55,972 | INFO     | traces error code: 0
[2025-10-18 22:16:56] 2025-10-19 02:16:55,972 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 22:16:56] 2025-10-19 02:16:56,425 [wrapper] ==== pilot stdout END ====
[2025-10-18 22:16:56] 2025-10-19 02:16:56,443 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 22:16:56] 2025-10-19 02:16:56,449 [wrapper] pilotpid: 624026
[2025-10-18 22:16:56] 2025-10-19 02:16:56,452 [wrapper] Pilot exit status: 0
[2025-10-18 22:16:56] 2025-10-19 02:16:56,511 [wrapper] pandaids: 6848023722
[2025-10-18 22:16:56] 2025-10-19 02:16:56,594 [wrapper] cleanup supervisor_pilot 1940974 624027
[2025-10-18 22:16:56] 2025-10-19 02:16:56,599 [wrapper] Test setup, not cleaning
[2025-10-18 22:16:56] 2025-10-19 02:16:56,602 [wrapper] apfmon messages muted
[2025-10-18 22:16:56] 2025-10-19 02:16:56,605 [wrapper] ==== wrapper stdout END ====
[2025-10-18 22:16:56] 2025-10-19 02:16:56,608 [wrapper] ==== wrapper stderr END ====
[2025-10-18 22:16:56]  *** Error codes and diagnostics ***
[2025-10-18 22:16:56]     "exeErrorCode": 0,
[2025-10-18 22:16:56]     "exeErrorDiag": "",
[2025-10-18 22:16:56]     "pilotErrorCode": 0,
[2025-10-18 22:16:56]     "pilotErrorDiag": "",
[2025-10-18 22:16:56]  *** Listing of results directory ***
[2025-10-18 22:16:56] total 442028
[2025-10-18 22:16:56] -rw-r--r--. 1 boincer umatlas    557409 Oct 18 02:39 pilot3.tar.gz
[2025-10-18 22:16:56] -rwx------. 1 boincer umatlas     36292 Oct 18 02:47 runpilot2-wrapper.sh
[2025-10-18 22:16:56] -rw-r--r--. 1 boincer umatlas      5112 Oct 18 02:47 queuedata.json
[2025-10-18 22:16:56] -rw-r--r--. 1 boincer umatlas       100 Oct 18 15:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 22:16:56] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 18 15:50 run_atlas
[2025-10-18 22:16:56] -rw-r--r--. 1 boincer umatlas       105 Oct 18 15:50 job.xml
[2025-10-18 22:16:56] -rw-r--r--. 2 boincer umatlas 229916522 Oct 18 15:50 EVNT.46771634._001684.pool.root.1
[2025-10-18 22:16:56] drwxrwx--x. 2 boincer umatlas      4096 Oct 18 15:50 shared
[2025-10-18 22:16:56] -rw-r--r--. 2 boincer umatlas    569668 Oct 18 15:50 input.tar.gz
[2025-10-18 22:16:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 18 15:50 start_atlas.sh
[2025-10-18 22:16:56] -rw-r--r--. 1 boincer umatlas         0 Oct 18 15:50 boinc_lockfile
[2025-10-18 22:16:56] -rw-r--r--. 1 boincer umatlas      2558 Oct 18 15:50 pandaJob.out
[2025-10-18 22:16:56] -rw-------. 1 boincer umatlas    976734 Oct 18 15:52 agis_schedconf.cvmfs.json
[2025-10-18 22:16:56] drwx------. 5 boincer umatlas      4096 Oct 18 15:52 pilot3
[2025-10-18 22:16:56] -rw-r--r--. 1 boincer umatlas      6657 Oct 18 22:10 init_data.xml
[2025-10-18 22:16:56] -rw-------. 1 boincer umatlas 212296538 Oct 18 22:15 HITS.46771637._038650.pool.root.1
[2025-10-18 22:16:56] -rw-r--r--. 1 boincer umatlas       531 Oct 18 22:15 boinc_task_state.xml
[2025-10-18 22:16:56] -rw-------. 1 boincer umatlas      1042 Oct 18 22:15 memory_monitor_summary.json
[2025-10-18 22:16:56] -rw-------. 1 boincer umatlas        95 Oct 18 22:15 pilot_heartbeat.json
[2025-10-18 22:16:56] -rw-------. 1 boincer umatlas   1560740 Oct 18 22:16 agis_ddmendpoints.agis.ALL.json
[2025-10-18 22:16:56] -rw-------. 1 boincer umatlas    557303 Oct 18 22:16 log.46771637._038650.job.log.tgz.1
[2025-10-18 22:16:56] -rw-------. 1 boincer umatlas      7821 Oct 18 22:16 heartbeat.json
[2025-10-18 22:16:56] -rw-r--r--. 1 boincer umatlas      8192 Oct 18 22:16 boinc_mmap_file
[2025-10-18 22:16:56] -rw-r--r--. 1 boincer umatlas        28 Oct 18 22:16 wrapper_checkpoint.txt
[2025-10-18 22:16:56] -rw-------. 1 boincer umatlas      4939 Oct 18 22:16 pilotlog.txt
[2025-10-18 22:16:56] -rw-------. 1 boincer umatlas   2701474 Oct 18 22:16 log.46771637._038650.job.log.1
[2025-10-18 22:16:56] -rw-------. 1 boincer umatlas       357 Oct 18 22:16 output.list
[2025-10-18 22:16:56] -rw-r--r--. 1 boincer umatlas       620 Oct 18 22:16 runtime_log
[2025-10-18 22:16:56] -rw-------. 1 boincer umatlas   3276800 Oct 18 22:16 result.tar.gz
[2025-10-18 22:16:56] -rw-------. 1 boincer umatlas       656 Oct 18 22:16 Uv7NDmetFU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaPwNDmOsOP1m.diag
[2025-10-18 22:16:56] -rw-r--r--. 1 boincer umatlas      8689 Oct 18 22:16 runtime_log.err
[2025-10-18 22:16:56] -rw-r--r--. 1 boincer umatlas     21262 Oct 18 22:16 stderr.txt
[2025-10-18 22:16:56] HITS file was successfully produced:
[2025-10-18 22:16:56] -rw-------. 1 boincer umatlas 212296538 Oct 18 22:15 shared/HITS.pool.root.1
[2025-10-18 22:16:56]  *** Contents of shared directory: ***
[2025-10-18 22:16:56] total 435636
[2025-10-18 22:16:56] -rw-r--r--. 2 boincer umatlas 229916522 Oct 18 15:50 ATLAS.root_0
[2025-10-18 22:16:56] -rw-r--r--. 2 boincer umatlas    569668 Oct 18 15:50 input.tar.gz
[2025-10-18 22:16:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 18 15:50 start_atlas.sh
[2025-10-18 22:16:56] -rw-------. 1 boincer umatlas 212296538 Oct 18 22:15 HITS.pool.root.1
[2025-10-18 22:16:56] -rw-------. 1 boincer umatlas   3276800 Oct 18 22:16 result.tar.gz
22:16:58 (609632): run_atlas exited; CPU time 56709.389989
22:16:58 (609632): called boinc_finish(0)

</stderr_txt>
]]>

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