Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:12:11 (3583678): wrapper (7.7.26015): starting
04:12:11 (3583678): wrapper: running run_atlas (--nthreads 8)
[2025-10-18 04:12:11] Arguments: --nthreads 8
[2025-10-18 04:12:11] Threads: 8
[2025-10-18 04:12:11] Checking for CVMFS
[2025-10-18 04:12:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 04:12:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 04:12:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 04:12:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 04:12:12] 2.11.3.0 2046 40054 234052 151848 3 627 33267193 45568000 14604 130560 0 295521590 99.865 121218323 24550 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-18 04:12:12] CVMFS is ok
[2025-10-18 04:12:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 04:12:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 04:12:12] Further information can be found at the LHC@home message board.
[2025-10-18 04:12:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 04:12:12] Checking for apptainer binary...
[2025-10-18 04:12:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 04:12:12] Running /usr/bin/apptainer --version
[2025-10-18 04:12:12] apptainer version 1.4.1-1.el9
[2025-10-18 04:12:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 04:12:13] wns0018.triumf.lcg
[2025-10-18 04:12:13] apptainer works
[2025-10-18 04:12:13] Set ATHENA_PROC_NUMBER=8
[2025-10-18 04:12:13] Set ATHENA_CORE_NUMBER=8
[2025-10-18 04:12:13] Starting ATLAS job with PandaID=6848028232
[2025-10-18 04:12:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 04:17:03]  *** The last 200 lines of the pilot log: ***
[2025-10-18 04:17:03] 2025-10-18 11:16:30,816 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | WARNING  | wrong length of table data, x=[1760786027.0], y=[2145.0] (must be same and length>=4)
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | INFO     | ..............................
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | INFO     | . Timing measurements:
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | INFO     | . get job = 0 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | INFO     | . initial setup = 5 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | INFO     | . payload setup = 16 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | . stage-in = 0 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | . payload execution = 38 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | . stage-out = 2 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | . log creation = 0 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | ..............................
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6848028232/pilotlog.txt
[2025-10-18 04:17:03] 2025-10-18 11:16:30,907 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-18 04:17:03] - Log from pilotlog.txt -
[2025-10-18 04:17:03] 2025-10-18 11:16:30,793 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6848028232/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 04:17:03] 2025-10-18 11:16:30,815 | INFO     | extracted standard info from prmon json
[2025-10-18 04:17:03] 2025-10-18 11:16:30,816 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 04:17:03] 2025-10-18 11:16:30,816 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 04:17:03] 2025-10-18 11:16:30,816 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 04:17:03] 2025-10-18 11:16:30,816 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | WARNING  | wrong length of table data, x=[1760786027.0], y=[2145.0] (must be same and length>=4)
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | INFO     | ..............................
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | INFO     | . Timing measurements:
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | INFO     | . get job = 0 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | INFO     | . initial setup = 5 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | INFO     | . payload setup = 16 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | . stage-in = 0 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | . payload execution = 38 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | . stage-out = 2 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | . log creation = 0 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | ..............................
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6848028232/pilotlog.txt
[2025-10-18 04:17:03] 2025-10-18 11:16:30,907 | WARNING  | 
[2025-10-18 04:17:03] [begin log extracts]
[2025-10-18 04:17:03] - Log from pilotlog.txt -
[2025-10-18 04:17:03] 2025-10-18 11:16:30,793 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6848028232/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 04:17:03] 2025-10-18 11:16:30,815 | INFO     | extracted standard info from prmon json
[2025-10-18 04:17:03] 2025-10-18 11:16:30,816 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 04:17:03] 2025-10-18 11:16:30,816 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 04:17:03] 2025-10-18 11:16:30,816 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 04:17:03] 2025-10-18 11:16:30,816 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | WARNING  | wrong length of table data, x=[1760786027.0], y=[2145.0] (must be same and length>=4)
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | INFO     | ..............................
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | INFO     | . Timing measurements:
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | INFO     | . get job = 0 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | INFO     | . initial setup = 5 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,817 | INFO     | . payload setup = 16 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | . stage-in = 0 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | . payload execution = 38 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | . stage-out = 2 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | . log creation = 0 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | ..............................
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-18 04:17:03] 2025-10-18 11:16:30,818 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6848028232/pilotlog.txt
[2025-10-18 04:17:03] [end log extracts]
[2025-10-18 04:17:03] 2025-10-18 11:16:30,907 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-18 04:17:03] 2025-10-18 11:16:30,908 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-18 04:17:03] 2025-10-18 11:16:30,979 | INFO     | 
[2025-10-18 04:17:03] 2025-10-18 11:16:30,979 | INFO     | job summary report
[2025-10-18 04:17:03] 2025-10-18 11:16:30,979 | INFO     | --------------------------------------------------
[2025-10-18 04:17:03] 2025-10-18 11:16:30,979 | INFO     | PanDA job id: 6848028232
[2025-10-18 04:17:03] 2025-10-18 11:16:30,979 | INFO     | task id: 46771637
[2025-10-18 04:17:03] 2025-10-18 11:16:30,979 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-18 04:14:05,378 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-18 04:17:03] 2025-10-18 11:16:30,979 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 04:17:03] 2025-10-18 11:16:30,979 | INFO     | pilot state: failed 
[2025-10-18 04:17:03] 2025-10-18 11:16:30,979 | INFO     | transexitcode: 65
[2025-10-18 04:17:03] 2025-10-18 11:16:30,979 | INFO     | exeerrorcode: 65
[2025-10-18 04:17:03] 2025-10-18 11:16:30,980 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-18 04:17:03] 2025-10-18 11:16:30,980 | INFO     | exitcode: 65
[2025-10-18 04:17:03] 2025-10-18 11:16:30,980 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-18 04:17:03] 2025-10-18 11:16:30,980 | INFO     | cpuconsumptiontime: 18 s
[2025-10-18 04:17:03] 2025-10-18 11:16:30,980 | INFO     | nevents: 0
[2025-10-18 04:17:03] 2025-10-18 11:16:30,980 | INFO     | neventsw: 0
[2025-10-18 04:17:03] 2025-10-18 11:16:30,980 | INFO     | pid: 3594017
[2025-10-18 04:17:03] 2025-10-18 11:16:30,980 | INFO     | pgrp: 3594017
[2025-10-18 04:17:03] 2025-10-18 11:16:30,980 | INFO     | corecount: 8
[2025-10-18 04:17:03] 2025-10-18 11:16:30,980 | INFO     | event service: False
[2025-10-18 04:17:03] 2025-10-18 11:16:30,980 | INFO     | sizes: {0: 2348755, 1: 2348954, 12: 2348954, 16: 2349244, 22: 2349272, 59: 2372634, 63: 2376926, 64: 2376954, 196: 2377148}
[2025-10-18 04:17:03] 2025-10-18 11:16:30,980 | INFO     | --------------------------------------------------
[2025-10-18 04:17:03] 2025-10-18 11:16:30,980 | INFO     | 
[2025-10-18 04:17:03] 2025-10-18 11:16:30,980 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-18 04:17:03] 2025-10-18 11:16:31,134 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,134 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,134 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,134 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,134 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,134 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,134 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,134 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,135 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,135 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,135 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,135 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,135 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,135 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 04:17:03] 2025-10-18 11:16:31,135 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,135 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 04:17:03] 2025-10-18 11:16:31,135 | INFO     | job 6848028232 has completed (purged errors)
[2025-10-18 04:17:03] 2025-10-18 11:16:31,136 | INFO     | overall cleanup function is called
[2025-10-18 04:17:03] 2025-10-18 11:16:32,142 | INFO     | --- collectZombieJob: --- 10, [3594017]
[2025-10-18 04:17:03] 2025-10-18 11:16:32,142 | INFO     | zombie collector waiting for pid 3594017
[2025-10-18 04:17:03] 2025-10-18 11:16:32,142 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 04:17:03] 2025-10-18 11:16:32,142 | INFO     | collected zombie processes
[2025-10-18 04:17:03] 2025-10-18 11:16:32,142 | INFO     | will attempt to kill all subprocesses of pid=3594017
[2025-10-18 04:17:03] 2025-10-18 11:16:32,375 | INFO     | process IDs to be killed: [3594017] (in reverse order)
[2025-10-18 04:17:03] 2025-10-18 11:16:33,155 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 04:17:03] 2025-10-18 11:16:33,155 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 04:17:03] 2025-10-18 11:16:33,201 | INFO     | did not find any defunct processes belonging to 3594017
[2025-10-18 04:17:03] 2025-10-18 11:16:33,293 | INFO     | did not find any defunct processes belonging to 3594017
[2025-10-18 04:17:03] 2025-10-18 11:16:33,294 | INFO     | ready for new job
[2025-10-18 04:17:03] 2025-10-18 11:16:33,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 04:17:03] 2025-10-18 11:16:33,295 | INFO     | ***************************************
[2025-10-18 04:17:03] 2025-10-18 11:16:33,295 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 04:17:03] 2025-10-18 11:16:33,295 | INFO     | ***************************************
[2025-10-18 04:17:03] 2025-10-18 11:16:33,295 | INFO     | 
[2025-10-18 04:17:03] 2025-10-18 11:16:33,297 | INFO     | architecture information:
[2025-10-18 04:17:03] 2025-10-18 11:16:33,324 | INFO     | executing command: cat /etc/os-release
[2025-10-18 04:17:03] 2025-10-18 11:16:33,427 | INFO     | cat /etc/os-release:
[2025-10-18 04:17:03] NAME="CentOS Linux"
[2025-10-18 04:17:03] VERSION="7 (Core)"
[2025-10-18 04:17:03] ID="centos"
[2025-10-18 04:17:03] ID_LIKE="rhel fedora"
[2025-10-18 04:17:03] VERSION_ID="7"
[2025-10-18 04:17:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 04:17:03] ANSI_COLOR="0;31"
[2025-10-18 04:17:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 04:17:03] HOME_URL="https://www.centos.org/"
[2025-10-18 04:17:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 04:17:03] 
[2025-10-18 04:17:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 04:17:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 04:17:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 04:17:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 04:17:03] 
[2025-10-18 04:17:03] 2025-10-18 11:16:33,427 | INFO     | ***************************************
[2025-10-18 04:17:03] 2025-10-18 11:16:33,931 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-18 04:17:03] 2025-10-18 11:16:34,017 | INFO     | sufficient remaining disk space (1386690379776 B)
[2025-10-18 04:17:03] 2025-10-18 11:16:34,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 04:17:03] 2025-10-18 11:16:34,018 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 04:17:03] 2025-10-18 11:16:34,018 | INFO     | update_server=False
[2025-10-18 04:17:03] 2025-10-18 11:16:34,018 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 04:17:03] 2025-10-18 11:16:34,025 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 04:17:03] 2025-10-18 11:16:34,202 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-18 04:17:03] 2025-10-18 11:16:34,202 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-18 04:17:03] 2025-10-18 11:16:34,202 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 04:17:03] 2025-10-18 11:16:34,202 | INFO     | will abort loop
[2025-10-18 04:17:03] 2025-10-18 11:16:34,222 | INFO     | all payload control threads have been joined
[2025-10-18 04:17:03] 2025-10-18 11:16:34,487 | INFO     | all job control threads have been joined
[2025-10-18 04:17:03] 2025-10-18 11:16:34,865 | INFO     | all data control threads have been joined
[2025-10-18 04:17:03] 2025-10-18 11:16:35,024 | INFO     | [job] retrieve thread has finished
[2025-10-18 04:17:03] 2025-10-18 11:16:35,208 | INFO     | [job] job monitor thread has finished
[2025-10-18 04:17:03] 2025-10-18 11:16:35,228 | INFO     | [payload] control thread has finished
[2025-10-18 04:17:03] 2025-10-18 11:16:35,407 | INFO     | [payload] validate_post thread has finished
[2025-10-18 04:17:03] 2025-10-18 11:16:35,493 | INFO     | [job] control thread has finished
[2025-10-18 04:17:03] 2025-10-18 11:16:35,510 | INFO     | [data] copytool_in thread has finished
[2025-10-18 04:17:03] 2025-10-18 11:16:35,575 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 04:17:03] 2025-10-18 11:16:35,575 | INFO     | [job] validate thread has finished
[2025-10-18 04:17:03] 2025-10-18 11:16:35,872 | INFO     | [data] control thread has finished
[2025-10-18 04:17:03] 2025-10-18 11:16:36,008 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 04:17:03] 2025-10-18 11:16:36,032 | INFO     | [data] copytool_out thread has finished
[2025-10-18 04:17:03] 2025-10-18 11:16:36,168 | INFO     | [payload] failed_post thread has finished
[2025-10-18 04:17:03] 2025-10-18 11:16:36,320 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 04:17:03] 2025-10-18 11:16:36,398 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 04:17:03] 2025-10-18 11:16:36,488 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 04:17:03] 2025-10-18 11:16:36,488 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 04:17:03] 2025-10-18 11:16:37,014 | INFO     | [job] queue monitor thread has finished
[2025-10-18 04:17:03] 2025-10-18 11:16:40,333 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 04:17:03] 2025-10-18 11:16:41,417 | INFO     | [monitor] cgroup control has ended
[2025-10-18 04:17:03] 2025-10-18 11:16:43,018 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139693467662144)>', '<ExcThread(monitor, started 139692938884864)>']
[2025-10-18 04:17:03] 2025-10-18 11:16:48,044 | INFO     | all workflow threads have been joined
[2025-10-18 04:17:03] 2025-10-18 11:16:48,044 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 04:17:03] 2025-10-18 11:16:48,044 | INFO     | traces error code: 0
[2025-10-18 04:17:03] 2025-10-18 11:16:48,045 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 04:17:03] 2025-10-18 11:17:03,354 | INFO     | PID=3587362 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 04:17:03] 2025-10-18 11:17:03,354 | INFO     | .. there are 25 such processes running
[2025-10-18 04:17:03] 2025-10-18 11:17:03,355 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 04:17:03] 2025-10-18 11:17:03,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 04:17:03] 2025-10-18 11:17:03,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 04:17:03] 2025-10-18 11:17:03,355 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 04:17:03] 2025-10-18 11:17:03,355 | INFO     | [monitor] control thread has ended
[2025-10-18 04:17:03] 2025-10-18 11:17:03,465 [wrapper] ==== pilot stdout END ====
[2025-10-18 04:17:03] 2025-10-18 11:17:03,468 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 04:17:03] 2025-10-18 11:17:03,469 [wrapper] pilotpid: 3587362
[2025-10-18 04:17:03] 2025-10-18 11:17:03,471 [wrapper] Pilot exit status: 0
[2025-10-18 04:17:03] 2025-10-18 11:17:03,488 [wrapper] pandaids: 6848028232
[2025-10-18 04:17:03] 2025-10-18 11:17:03,524 [wrapper] cleanup supervisor_pilot 3587368 3587363
[2025-10-18 04:17:03] 2025-10-18 11:17:03,526 [wrapper] Test setup, not cleaning
[2025-10-18 04:17:03] 2025-10-18 11:17:03,528 [wrapper] apfmon messages muted
[2025-10-18 04:17:03] 2025-10-18 11:17:03,529 [wrapper] ==== wrapper stdout END ====
[2025-10-18 04:17:03] 2025-10-18 11:17:03,531 [wrapper] ==== wrapper stderr END ====
[2025-10-18 04:17:03]  *** Error codes and diagnostics ***
[2025-10-18 04:17:03]     "exeErrorCode": 65,
[2025-10-18 04:17:03]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-18 04:17:03]     "pilotErrorCode": 1305,
[2025-10-18 04:17:03]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-18 04:17:03]  *** Listing of results directory ***
[2025-10-18 04:17:03] total 227312
[2025-10-18 04:17:03] -rw-r--r--. 1 boinc boinc    557409 Oct 18 01:34 pilot3.tar.gz
[2025-10-18 04:17:03] -rw-r--r--. 1 boinc boinc      5112 Oct 18 01:56 queuedata.json
[2025-10-18 04:17:03] -rwx------. 1 boinc boinc     36292 Oct 18 01:57 runpilot2-wrapper.sh
[2025-10-18 04:17:03] -rw-r--r--. 1 boinc boinc       100 Oct 18 04:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 04:17:03] -rwxr-xr-x. 1 boinc boinc      7986 Oct 18 04:12 run_atlas
[2025-10-18 04:17:03] -rw-r--r--. 1 boinc boinc       105 Oct 18 04:12 job.xml
[2025-10-18 04:17:03] -rw-r--r--. 2 boinc boinc 228636661 Oct 18 04:12 EVNT.46771634._001759.pool.root.1
[2025-10-18 04:17:03] -rw-r--r--. 1 boinc boinc      6444 Oct 18 04:12 init_data.xml
[2025-10-18 04:17:03] -rw-r--r--. 2 boinc boinc     15120 Oct 18 04:12 start_atlas.sh
[2025-10-18 04:17:03] drwxrwx--x. 2 boinc boinc      4096 Oct 18 04:12 shared
[2025-10-18 04:17:03] -rw-r--r--. 2 boinc boinc    569681 Oct 18 04:12 input.tar.gz
[2025-10-18 04:17:03] -rw-r--r--. 1 boinc boinc         0 Oct 18 04:12 boinc_lockfile
[2025-10-18 04:17:03] -rw-r--r--. 1 boinc boinc      2558 Oct 18 04:12 pandaJob.out
[2025-10-18 04:17:03] -rw-------. 1 boinc boinc    976749 Oct 18 04:12 agis_schedconf.cvmfs.json
[2025-10-18 04:17:03] -rw-------. 1 boinc boinc   1560740 Oct 18 04:12 agis_ddmendpoints.agis.ALL.json
[2025-10-18 04:17:03] drwx------. 5 boinc boinc      4096 Oct 18 04:12 pilot3
[2025-10-18 04:17:03] -rw-r--r--. 1 boinc boinc       523 Oct 18 04:14 boinc_task_state.xml
[2025-10-18 04:17:03] -rw-------. 1 boinc boinc       947 Oct 18 04:14 memory_monitor_summary.json
[2025-10-18 04:17:03] -rw-------. 1 boinc boinc     22289 Oct 18 04:14 log.46771637._040329.job.log.tgz.1
[2025-10-18 04:17:03] -rw-------. 1 boinc boinc      8384 Oct 18 04:16 heartbeat.json
[2025-10-18 04:17:03] -rw-r--r--. 1 boinc boinc        22 Oct 18 04:17 wrapper_checkpoint.txt
[2025-10-18 04:17:03] -rw-r--r--. 1 boinc boinc      8192 Oct 18 04:17 boinc_mmap_file
[2025-10-18 04:17:03] -rw-------. 1 boinc boinc        95 Oct 18 04:17 pilot_heartbeat.json
[2025-10-18 04:17:03] -rw-------. 1 boinc boinc       823 Oct 18 04:17 pilotlog.txt
[2025-10-18 04:17:03] -rw-------. 1 boinc boinc     91132 Oct 18 04:17 log.46771637._040329.job.log.1
[2025-10-18 04:17:03] -rw-------. 1 boinc boinc       188 Oct 18 04:17 output.list
[2025-10-18 04:17:03] -rw-r--r--. 1 boinc boinc       620 Oct 18 04:17 runtime_log
[2025-10-18 04:17:03] -rw-------. 1 boinc boinc    133120 Oct 18 04:17 result.tar.gz
[2025-10-18 04:17:03] -rw-------. 1 boinc boinc       644 Oct 18 04:17 ZvvNDmUvHU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBgwNDmQrVIWm.diag
[2025-10-18 04:17:03] -rw-r--r--. 1 boinc boinc      8526 Oct 18 04:17 runtime_log.err
[2025-10-18 04:17:03] -rw-r--r--. 1 boinc boinc     21827 Oct 18 04:17 stderr.txt
[2025-10-18 04:17:03] No HITS result produced
[2025-10-18 04:17:03]  *** Contents of shared directory: ***
[2025-10-18 04:17:03] total 223992
[2025-10-18 04:17:03] -rw-r--r--. 2 boinc boinc 228636661 Oct 18 04:12 ATLAS.root_0
[2025-10-18 04:17:03] -rw-r--r--. 2 boinc boinc     15120 Oct 18 04:12 start_atlas.sh
[2025-10-18 04:17:03] -rw-r--r--. 2 boinc boinc    569681 Oct 18 04:12 input.tar.gz
[2025-10-18 04:17:03] -rw-------. 1 boinc boinc    133120 Oct 18 04:17 result.tar.gz
04:17:04 (3583678): run_atlas exited; CPU time 27.961972
04:17:04 (3583678): called boinc_finish(0)

</stderr_txt>
]]>

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