Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:45:40 (1875980): wrapper (7.7.26015): starting
14:45:40 (1875980): wrapper: running run_atlas (--nthreads 2)
[2025-10-18 14:45:40] Arguments: --nthreads 2
[2025-10-18 14:45:40] Threads: 2
[2025-10-18 14:45:40] Checking for CVMFS
[2025-10-18 14:45:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 14:45:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 14:45:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 14:45:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 14:45:41] 2.11.0.0 1846746 7 40816 151851 0 186 2911728 4194305 0 130560 0 91105 99.998 1360 1311 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-18 14:45:41] CVMFS is ok
[2025-10-18 14:45:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 14:45:41] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-18 14:45:41] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-18 14:45:41] Further information can be found at the LHC@home message board.
[2025-10-18 14:45:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 14:45:41] Checking for apptainer binary...
[2025-10-18 14:45:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 14:45:41] Running /usr/bin/apptainer --version
[2025-10-18 14:45:42] apptainer version 1.2.2-1.el8
[2025-10-18 14:45:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 14:45:42] bottom
[2025-10-18 14:45:42] apptainer works
[2025-10-18 14:45:42] Set ATHENA_PROC_NUMBER=2
[2025-10-18 14:45:42] Set ATHENA_CORE_NUMBER=2
[2025-10-18 14:45:42] Starting ATLAS job with PandaID=6848020172
[2025-10-18 14:45:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 14:52:19]  *** The last 200 lines of the pilot log: ***
[2025-10-18 14:52:19] 2025-10-18 12:51:47,626 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1997.267
[2025-10-18 14:52:19] 2025-10-18 12:51:47,627 | WARNING  | file does not exist either: /var/lib/boinc/slots/3/PanDA_Pilot-6848020172/memory_monitor_output.txt
[2025-10-18 14:52:19] 2025-10-18 12:51:47,627 | INFO     | memory summary dictionary not yet available
[2025-10-18 14:52:19] 2025-10-18 12:51:47,627 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 14:52:19] 2025-10-18 12:51:47,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 14:52:19] 2025-10-18 12:51:47,628 | INFO     | could have reported an average CPU frequency of 1879 MHz (4 samples)
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | ..............................
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | . Timing measurements:
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | . get job = 0 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | . initial setup = 3 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | . payload setup = 8 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | . stage-in = 0 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | . payload execution = 132 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,630 | INFO     | . stage-out = 0 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,630 | INFO     | . log creation = 0 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,630 | INFO     | ..............................
[2025-10-18 14:52:19] 2025-10-18 12:51:47,630 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-18 14:52:19] 2025-10-18 12:51:47,630 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/3/PanDA_Pilot-6848020172/pilotlog.txt
[2025-10-18 14:52:19] 2025-10-18 12:51:47,649 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-18 14:52:19] - Log from pilotlog.txt -
[2025-10-18 14:52:19] 2025-10-18 12:51:45,920 | INFO     | time since job start (347s) is within the limit (172800.0s)
[2025-10-18 14:52:19] 2025-10-18 12:51:47,624 | INFO     | CPU arch script returned: x86-64-v1
[2025-10-18 14:52:19] 2025-10-18 12:51:47,626 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1997.267
[2025-10-18 14:52:19] 2025-10-18 12:51:47,627 | WARNING  | file does not exist either: /var/lib/boinc/slots/3/PanDA_Pilot-6848020172/memory_monitor_output.txt
[2025-10-18 14:52:19] 2025-10-18 12:51:47,627 | INFO     | memory summary dictionary not yet available
[2025-10-18 14:52:19] 2025-10-18 12:51:47,627 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 14:52:19] 2025-10-18 12:51:47,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 14:52:19] 2025-10-18 12:51:47,628 | INFO     | could have reported an average CPU frequency of 1879 MHz (4 samples)
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | ..............................
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | . Timing measurements:
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | . get job = 0 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | . initial setup = 3 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | . payload setup = 8 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | . stage-in = 0 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | . payload execution = 132 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,630 | INFO     | . stage-out = 0 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,630 | INFO     | . log creation = 0 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,630 | INFO     | ..............................
[2025-10-18 14:52:19] 2025-10-18 12:51:47,630 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-18 14:52:19] 2025-10-18 12:51:47,630 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/3/PanDA_Pilot-6848020172/pilotlog.txt
[2025-10-18 14:52:19] 2025-10-18 12:51:47,649 | WARNING  | 
[2025-10-18 14:52:19] [begin log extracts]
[2025-10-18 14:52:19] - Log from pilotlog.txt -
[2025-10-18 14:52:19] 2025-10-18 12:51:45,920 | INFO     | time since job start (347s) is within the limit (172800.0s)
[2025-10-18 14:52:19] 2025-10-18 12:51:47,624 | INFO     | CPU arch script returned: x86-64-v1
[2025-10-18 14:52:19] 2025-10-18 12:51:47,626 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1997.267
[2025-10-18 14:52:19] 2025-10-18 12:51:47,627 | WARNING  | file does not exist either: /var/lib/boinc/slots/3/PanDA_Pilot-6848020172/memory_monitor_output.txt
[2025-10-18 14:52:19] 2025-10-18 12:51:47,627 | INFO     | memory summary dictionary not yet available
[2025-10-18 14:52:19] 2025-10-18 12:51:47,627 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 14:52:19] 2025-10-18 12:51:47,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 14:52:19] 2025-10-18 12:51:47,628 | INFO     | could have reported an average CPU frequency of 1879 MHz (4 samples)
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | ..............................
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | . Timing measurements:
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | . get job = 0 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | . initial setup = 3 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | . payload setup = 8 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | . stage-in = 0 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,629 | INFO     | . payload execution = 132 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,630 | INFO     | . stage-out = 0 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,630 | INFO     | . log creation = 0 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,630 | INFO     | ..............................
[2025-10-18 14:52:19] 2025-10-18 12:51:47,630 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-18 14:52:19] 2025-10-18 12:51:47,630 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/3/PanDA_Pilot-6848020172/pilotlog.txt
[2025-10-18 14:52:19] [end log extracts]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,650 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-18 14:52:19] 2025-10-18 12:51:47,651 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-10-18 14:52:19] 2025-10-18 12:51:47,770 | INFO     | 
[2025-10-18 14:52:19] 2025-10-18 12:51:47,771 | INFO     | job summary report
[2025-10-18 14:52:19] 2025-10-18 12:51:47,771 | INFO     | --------------------------------------------------
[2025-10-18 14:52:19] 2025-10-18 12:51:47,771 | INFO     | PanDA job id: 6848020172
[2025-10-18 14:52:19] 2025-10-18 12:51:47,771 | INFO     | task id: 46771637
[2025-10-18 14:52:19] 2025-10-18 12:51:47,771 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-18 14:48:33,069 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-18 14:52:19] 2025-10-18 12:51:47,772 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 14:52:19] 2025-10-18 12:51:47,772 | INFO     | pilot state: failed 
[2025-10-18 14:52:19] 2025-10-18 12:51:47,772 | INFO     | transexitcode: 65
[2025-10-18 14:52:19] 2025-10-18 12:51:47,772 | INFO     | exeerrorcode: 65
[2025-10-18 14:52:19] 2025-10-18 12:51:47,772 | INFO     | exeerrordiag: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-10-18 14:52:19] 2025-10-18 12:51:47,772 | INFO     | exitcode: 65
[2025-10-18 14:52:19] 2025-10-18 12:51:47,772 | INFO     | exitmsg: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-10-18 14:52:19] 2025-10-18 12:51:47,772 | INFO     | cpuconsumptiontime: 154 s
[2025-10-18 14:52:19] 2025-10-18 12:51:47,773 | INFO     | nevents: 0
[2025-10-18 14:52:19] 2025-10-18 12:51:47,773 | INFO     | neventsw: 0
[2025-10-18 14:52:19] 2025-10-18 12:51:47,773 | INFO     | pid: 1886103
[2025-10-18 14:52:19] 2025-10-18 12:51:47,773 | INFO     | pgrp: 1886103
[2025-10-18 14:52:19] 2025-10-18 12:51:47,773 | INFO     | corecount: 2
[2025-10-18 14:52:19] 2025-10-18 12:51:47,773 | INFO     | event service: False
[2025-10-18 14:52:19] 2025-10-18 12:51:47,773 | INFO     | sizes: {0: 2348927, 1: 2348927, 7: 2349217, 12: 2349245, 204: 2372597, 205: 2372573, 206: 2377024, 209: 2377052, 331: 2377246}
[2025-10-18 14:52:19] 2025-10-18 12:51:47,774 | INFO     | --------------------------------------------------
[2025-10-18 14:52:19] 2025-10-18 12:51:47,774 | INFO     | 
[2025-10-18 14:52:19] 2025-10-18 12:51:47,774 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-18 14:52:19] 2025-10-18 12:51:47,800 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,800 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,800 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,800 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,801 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,801 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,801 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,801 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,801 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,801 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,802 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,802 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,802 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,802 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,802 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,802 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,802 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,803 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 14:52:19] 2025-10-18 12:51:47,803 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,803 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 14:52:19] 2025-10-18 12:51:47,803 | INFO     | job 6848020172 has completed (purged errors)
[2025-10-18 14:52:19] 2025-10-18 12:51:47,803 | INFO     | overall cleanup function is called
[2025-10-18 14:52:19] 2025-10-18 12:51:48,808 | INFO     | --- collectZombieJob: --- 10, [1886103]
[2025-10-18 14:52:19] 2025-10-18 12:51:48,808 | INFO     | zombie collector waiting for pid 1886103
[2025-10-18 14:52:19] 2025-10-18 12:51:48,809 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 14:52:19] 2025-10-18 12:51:48,809 | INFO     | collected zombie processes
[2025-10-18 14:52:19] 2025-10-18 12:51:48,809 | INFO     | will attempt to kill all subprocesses of pid=1886103
[2025-10-18 14:52:19] 2025-10-18 12:51:48,881 | INFO     | process IDs to be killed: [1886103] (in reverse order)
[2025-10-18 14:52:19] 2025-10-18 12:51:48,927 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 14:52:19] 2025-10-18 12:51:48,928 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 14:52:19] 2025-10-18 12:51:48,931 | INFO     | did not find any defunct processes belonging to 1886103
[2025-10-18 14:52:19] 2025-10-18 12:51:48,934 | INFO     | did not find any defunct processes belonging to 1886103
[2025-10-18 14:52:19] 2025-10-18 12:51:48,935 | INFO     | ready for new job
[2025-10-18 14:52:19] 2025-10-18 12:51:48,935 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 14:52:19] 2025-10-18 12:51:48,936 | INFO     | ***************************************
[2025-10-18 14:52:19] 2025-10-18 12:51:48,937 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 14:52:19] 2025-10-18 12:51:48,937 | INFO     | ***************************************
[2025-10-18 14:52:19] 2025-10-18 12:51:48,937 | INFO     | 
[2025-10-18 14:52:19] 2025-10-18 12:51:48,949 | INFO     | architecture information:
[2025-10-18 14:52:19] 2025-10-18 12:51:48,949 | INFO     | executing command: cat /etc/os-release
[2025-10-18 14:52:19] 2025-10-18 12:51:48,967 | INFO     | cat /etc/os-release:
[2025-10-18 14:52:19] NAME="CentOS Linux"
[2025-10-18 14:52:19] VERSION="7 (Core)"
[2025-10-18 14:52:19] ID="centos"
[2025-10-18 14:52:19] ID_LIKE="rhel fedora"
[2025-10-18 14:52:19] VERSION_ID="7"
[2025-10-18 14:52:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 14:52:19] ANSI_COLOR="0;31"
[2025-10-18 14:52:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 14:52:19] HOME_URL="https://www.centos.org/"
[2025-10-18 14:52:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 14:52:19] 
[2025-10-18 14:52:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 14:52:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 14:52:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 14:52:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 14:52:19] 
[2025-10-18 14:52:19] 2025-10-18 12:51:48,967 | INFO     | ***************************************
[2025-10-18 14:52:19] 2025-10-18 12:51:49,471 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-18 14:52:19] 2025-10-18 12:51:49,490 | INFO     | sufficient remaining disk space (214643507200 B)
[2025-10-18 14:52:19] 2025-10-18 12:51:49,490 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 14:52:19] 2025-10-18 12:51:49,491 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 14:52:19] 2025-10-18 12:51:49,491 | INFO     | update_server=False
[2025-10-18 14:52:19] 2025-10-18 12:51:49,491 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 14:52:19] 2025-10-18 12:51:49,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 14:52:19] 2025-10-18 12:51:49,492 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 14:52:19] 2025-10-18 12:51:49,492 | INFO     | aborting loop
[2025-10-18 14:52:19] 2025-10-18 12:51:49,492 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 14:52:19] 2025-10-18 12:51:49,682 | INFO     | all payload control threads have been joined
[2025-10-18 14:52:19] 2025-10-18 12:51:49,824 | INFO     | all data control threads have been joined
[2025-10-18 14:52:19] 2025-10-18 12:51:50,293 | INFO     | all job control threads have been joined
[2025-10-18 14:52:19] 2025-10-18 12:51:50,492 | INFO     | [job] retrieve thread has finished
[2025-10-18 14:52:19] 2025-10-18 12:51:50,497 | INFO     | [job] job monitor thread has finished
[2025-10-18 14:52:19] 2025-10-18 12:51:50,498 | INFO     | [job] queue monitor thread has finished
[2025-10-18 14:52:19] 2025-10-18 12:51:50,564 | INFO     | [payload] failed_post thread has finished
[2025-10-18 14:52:19] 2025-10-18 12:51:50,688 | INFO     | [payload] control thread has finished
[2025-10-18 14:52:19] 2025-10-18 12:51:50,736 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 14:52:19] 2025-10-18 12:51:50,740 | INFO     | [data] copytool_in thread has finished
[2025-10-18 14:52:19] 2025-10-18 12:51:50,825 | INFO     | [data] control thread has finished
[2025-10-18 14:52:19] 2025-10-18 12:51:50,912 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 14:52:19] 2025-10-18 12:51:51,298 | INFO     | [job] control thread has finished
[2025-10-18 14:52:19] 2025-10-18 12:51:51,313 | INFO     | [job] validate thread has finished
[2025-10-18 14:52:19] 2025-10-18 12:51:51,615 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 14:52:19] 2025-10-18 12:51:51,631 | INFO     | [payload] validate_post thread has finished
[2025-10-18 14:52:19] 2025-10-18 12:51:51,633 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 14:52:19] 2025-10-18 12:51:51,929 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 14:52:19] 2025-10-18 12:51:52,742 | INFO     | [data] copytool_out thread has finished
[2025-10-18 14:52:19] 2025-10-18 12:51:53,498 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 14:52:19] 2025-10-18 12:51:58,149 | INFO     | [monitor] cgroup control has ended
[2025-10-18 14:52:19] 2025-10-18 12:51:59,735 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140117734049600)>', '<ExcThread(monitor, started 140116983011072)>']
[2025-10-18 14:52:19] 2025-10-18 12:52:04,754 | INFO     | all workflow threads have been joined
[2025-10-18 14:52:19] 2025-10-18 12:52:04,755 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 14:52:19] 2025-10-18 12:52:04,755 | INFO     | traces error code: 0
[2025-10-18 14:52:19] 2025-10-18 12:52:04,755 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 14:52:19] 2025-10-18 12:52:19,079 | INFO     | PID=1879599 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 14:52:19] 2025-10-18 12:52:19,080 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 14:52:19] 2025-10-18 12:52:19,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 14:52:19] 2025-10-18 12:52:19,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 14:52:19] 2025-10-18 12:52:19,081 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 14:52:19] 2025-10-18 12:52:19,081 | INFO     | [monitor] control thread has ended
[2025-10-18 14:52:19] 2025-10-18 12:52:19,233 [wrapper] ==== pilot stdout END ====
[2025-10-18 14:52:19] 2025-10-18 12:52:19,237 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 14:52:19] 2025-10-18 12:52:19,241 [wrapper] pilotpid: 1879599
[2025-10-18 14:52:19] 2025-10-18 12:52:19,246 [wrapper] Pilot exit status: 0
[2025-10-18 14:52:19] 2025-10-18 12:52:19,262 [wrapper] pandaids: 6848020172
[2025-10-18 14:52:19] 2025-10-18 12:52:19,287 [wrapper] cleanup supervisor_pilot 1879605 1879600
[2025-10-18 14:52:19] 2025-10-18 12:52:19,293 [wrapper] Test setup, not cleaning
[2025-10-18 14:52:19] 2025-10-18 12:52:19,297 [wrapper] apfmon messages muted
[2025-10-18 14:52:19] 2025-10-18 12:52:19,300 [wrapper] ==== wrapper stdout END ====
[2025-10-18 14:52:19] 2025-10-18 12:52:19,304 [wrapper] ==== wrapper stderr END ====
[2025-10-18 14:52:19]  *** Error codes and diagnostics ***
[2025-10-18 14:52:19]     "exeErrorCode": 65,
[2025-10-18 14:52:19]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-10-18 14:52:19]     "pilotErrorCode": 1305,
[2025-10-18 14:52:19]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-10-18 14:52:19]  *** Listing of results directory ***
[2025-10-18 14:52:19] total 226212
[2025-10-18 14:52:19] -rw-r--r-- 1 boinc boinc    557409 Oct 18 05:33 pilot3.tar.gz
[2025-10-18 14:52:19] -rw-r--r-- 1 boinc boinc      5112 Oct 18 05:51 queuedata.json
[2025-10-18 14:52:19] -rwx------ 1 boinc boinc     36292 Oct 18 05:51 runpilot2-wrapper.sh
[2025-10-18 14:52:19] -rw-r--r-- 1 boinc boinc       100 Oct 18 14:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 14:52:19] -rwxr-xr-x 1 boinc boinc      7986 Oct 18 14:45 run_atlas
[2025-10-18 14:52:19] -rw-r--r-- 1 boinc boinc       105 Oct 18 14:45 job.xml
[2025-10-18 14:52:19] -rw-r--r-- 1 boinc boinc      5983 Oct 18 14:45 init_data.xml
[2025-10-18 14:52:19] -rw-r--r-- 2 boinc boinc 227406517 Oct 18 14:45 EVNT.46771634._000459.pool.root.1
[2025-10-18 14:52:19] drwxrwx--x 2 boinc boinc        68 Oct 18 14:45 shared
[2025-10-18 14:52:19] -rw-r--r-- 2 boinc boinc    569676 Oct 18 14:45 input.tar.gz
[2025-10-18 14:52:19] -rw-r--r-- 2 boinc boinc     15120 Oct 18 14:45 start_atlas.sh
[2025-10-18 14:52:19] -rw-r--r-- 1 boinc boinc         0 Oct 18 14:45 boinc_lockfile
[2025-10-18 14:52:19] -rw-r--r-- 1 boinc boinc      2557 Oct 18 14:45 pandaJob.out
[2025-10-18 14:52:19] -rw------- 1 boinc boinc    976750 Oct 18 14:45 agis_schedconf.cvmfs.json
[2025-10-18 14:52:19] -rw------- 1 boinc boinc   1560740 Oct 18 14:45 agis_ddmendpoints.agis.ALL.json
[2025-10-18 14:52:19] drwx------ 5 boinc boinc      4096 Oct 18 14:45 pilot3
[2025-10-18 14:52:19] -rw-r--r-- 1 boinc boinc       524 Oct 18 14:48 boinc_task_state.xml
[2025-10-18 14:52:19] -rw------- 1 boinc boinc     45987 Oct 18 14:49 log.46771637._036541.job.log.tgz.1
[2025-10-18 14:52:19] -rw------- 1 boinc boinc      8057 Oct 18 14:51 heartbeat.json
[2025-10-18 14:52:19] -rw-r--r-- 1 boinc boinc      8192 Oct 18 14:52 boinc_mmap_file
[2025-10-18 14:52:19] -rw-r--r-- 1 boinc boinc        23 Oct 18 14:52 wrapper_checkpoint.txt
[2025-10-18 14:52:19] -rw------- 1 boinc boinc        95 Oct 18 14:52 pilot_heartbeat.json
[2025-10-18 14:52:19] -rw------- 1 boinc boinc       747 Oct 18 14:52 pilotlog.txt
[2025-10-18 14:52:19] -rw------- 1 boinc boinc    129757 Oct 18 14:52 log.46771637._036541.job.log.1
[2025-10-18 14:52:19] -rw------- 1 boinc boinc       188 Oct 18 14:52 output.list
[2025-10-18 14:52:19] -rw-r--r-- 1 boinc boinc       620 Oct 18 14:52 runtime_log
[2025-10-18 14:52:19] -rw------- 1 boinc boinc    194560 Oct 18 14:52 result.tar.gz
[2025-10-18 14:52:19] -rw-r--r-- 1 boinc boinc      8505 Oct 18 14:52 runtime_log.err
[2025-10-18 14:52:19] -rw------- 1 boinc boinc       638 Oct 18 14:52 d9ZLDmBADU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDzvNDmXVRHon.diag
[2025-10-18 14:52:19] -rw-r--r-- 1 boinc boinc     21908 Oct 18 14:52 stderr.txt
[2025-10-18 14:52:19] No HITS result produced
[2025-10-18 14:52:19]  *** Contents of shared directory: ***
[2025-10-18 14:52:19] total 222848
[2025-10-18 14:52:19] -rw-r--r-- 2 boinc boinc 227406517 Oct 18 14:45 ATLAS.root_0
[2025-10-18 14:52:19] -rw-r--r-- 2 boinc boinc    569676 Oct 18 14:45 input.tar.gz
[2025-10-18 14:52:19] -rw-r--r-- 2 boinc boinc     15120 Oct 18 14:45 start_atlas.sh
[2025-10-18 14:52:19] -rw------- 1 boinc boinc    194560 Oct 18 14:52 result.tar.gz
14:52:21 (1875980): run_atlas exited; CPU time 134.911617
14:52:21 (1875980): called boinc_finish(0)

</stderr_txt>
]]>

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