Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-18 09:48:45 (19068): vboxwrapper version 26210
2025-10-18 09:48:45 (19068): BOINC client version: 8.2.4
2025-10-18 09:48:46 (19068): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-10-18 09:48:46 (19068): Successfully copied 'init_data.xml' to the shared directory.
2025-10-18 09:48:46 (19068): Create VM. (boinc_59447867a826a67f, slot#50)
2025-10-18 09:48:48 (19068): Setting Memory Size for VM. (4800MB)
2025-10-18 09:48:49 (19068): Setting CPU Count for VM. (8)
2025-10-18 09:48:49 (19068): Setting Chipset Options for VM.
2025-10-18 09:48:49 (19068): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-18 09:48:50 (19068): Setting Boot Options for VM.
2025-10-18 09:48:51 (19068): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-18 09:48:51 (19068): Enabling VM Network Access.
2025-10-18 09:48:52 (19068): Disabling USB Support for VM.
2025-10-18 09:48:52 (19068): Disabling COM Port Support for VM.
2025-10-18 09:48:52 (19068): Disabling LPT Port Support for VM.
2025-10-18 09:48:52 (19068): Disabling Audio Support for VM.
2025-10-18 09:48:53 (19068): Disabling Clipboard Support for VM.
2025-10-18 09:48:53 (19068): Disabling Drag and Drop Support for VM.
2025-10-18 09:48:53 (19068): Adding storage controller(s) to VM.
2025-10-18 09:48:54 (19068): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-18 09:48:54 (19068): Adding VirtualBox Guest Additions to VM.
2025-10-18 09:48:54 (19068): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-18 09:48:55 (19068): forwarding host port 62303 to guest port 80
2025-10-18 09:48:55 (19068): Enabling remote desktop for VM.
2025-10-18 09:48:56 (19068): Enabling shared directory for VM.
2025-10-18 09:48:56 (19068): Starting VM using VBoxManage interface. (boinc_59447867a826a67f, slot#50)
2025-10-18 09:49:06 (19068): Successfully started VM. (PID = '17160')
2025-10-18 09:49:06 (19068): Reporting VM Process ID to BOINC.
2025-10-18 09:49:06 (19068): Guest Log: BIOS: VirtualBox 7.2.2
2025-10-18 09:49:06 (19068): Guest Log: CPUID EDX: 0x178bfbff
2025-10-18 09:49:06 (19068): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-18 09:49:06 (19068): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-18 09:49:06 (19068): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-18 09:49:06 (19068): Detected: Web Application Enabled (http://localhost:62303)
2025-10-18 09:49:06 (19068): Detected: Remote Desktop Enabled (localhost:62304)
2025-10-18 09:49:06 (19068): Preference change detected
2025-10-18 09:49:06 (19068): Setting CPU throttle for VM. (100%)
2025-10-18 09:49:06 (19068): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-18 09:49:08 (19068): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-18 09:49:08 (19068): Guest Log: BIOS: Booting from Hard Disk...
2025-10-18 09:49:12 (19068): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-18 09:49:12 (19068): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-18 09:49:12 (19068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-18 09:49:25 (19068): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-18 09:49:25 (19068): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-18 09:49:48 (19068): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-18 09:49:48 (19068): Guest Log: 00:00:00.000431 main     Log opened 2025-10-18T09:49:46.283853000Z
2025-10-18 09:49:48 (19068): Guest Log: 00:00:00.000788 main     OS Product: Linux
2025-10-18 09:49:48 (19068): Guest Log: 00:00:00.000899 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-18 09:49:48 (19068): Guest Log: 00:00:00.001309 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-18 09:49:48 (19068): Guest Log: 00:00:00.001403 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-18 09:49:48 (19068): Guest Log: 00:00:00.001407 main     Process ID: 1374
2025-10-18 09:49:48 (19068): Guest Log: 00:00:00.001409 main     Package type: LINUX_64BITS_GENERIC
2025-10-18 09:49:48 (19068): Guest Log: 00:00:00.003819 main     5.2.32 r132073 started. Verbose level = 0
2025-10-18 09:49:48 (19068): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-18 09:49:48 (19068): Guest Log: [INFO] Mounting shared directory
2025-10-18 09:49:48 (19068): Guest Log: [INFO] Checking for init_data.xml
2025-10-18 09:49:58 (19068): Guest Log: 00:00:10.009345 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 720 979 000ns (GuestNow=1 760 806 198 011 833 000 ns GuestLast=1 760 780 986 290 854 000 ns fSetTimeLastLoop=true )
2025-10-18 09:50:55 (19068): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-18 09:50:55 (19068): Guest Log: [INFO] Detected branch: prod
2025-10-18 09:50:56 (19068): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-18 09:50:56 (19068): Guest Log: Copying input files
2025-10-18 09:50:59 (19068): Guest Log: Copied input files into RunAtlas.
2025-10-18 09:51:00 (19068): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-18 09:51:00 (19068): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-18 09:51:00 (19068): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-18 09:51:00 (19068): Guest Log: Further information can be found at the LHC@home message board.
2025-10-18 09:51:10 (19068): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-18 09:51:11 (19068): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-18 09:51:11 (19068): Guest Log: 2.6.3.0 1678 0 30136 151858 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-18 09:51:14 (19068): Guest Log: copied the webapp to /var/www
2025-10-18 09:51:14 (19068): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-18 09:51:14 (19068): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-18 09:51:14 (19068): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-18 09:51:14 (19068): Guest Log:  *** Starting ATLAS job. (PandaID=6848018698 taskID=46771637) ***
2025-10-18 11:29:13 (19068): Status Report: Elapsed Time: '6000.000000'
2025-10-18 11:29:13 (19068): Status Report: CPU Time: '25474.906250'
2025-10-18 13:09:19 (19068): Status Report: Elapsed Time: '12000.000000'
2025-10-18 13:09:19 (19068): Status Report: CPU Time: '64516.156250'
2025-10-18 14:49:26 (19068): Status Report: Elapsed Time: '18000.000000'
2025-10-18 14:49:26 (19068): Status Report: CPU Time: '104174.593750'
2025-10-18 16:29:32 (19068): Status Report: Elapsed Time: '24000.000000'
2025-10-18 16:29:32 (19068): Status Report: CPU Time: '150407.093750'
2025-10-18 18:09:38 (19068): Status Report: Elapsed Time: '30000.000000'
2025-10-18 18:09:38 (19068): Status Report: CPU Time: '188594.203125'
2025-10-18 18:15:19 (19068): Guest Log:  *** Job finished ***
2025-10-18 18:15:19 (19068): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:14:50,643 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:14:50,643 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:15:10,059 | INFO     | [monitor] cgroup control has ended
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:15:11,024 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140444023035712)>', '<ExcThread(monitor, started 140443081766656)>']
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:15:12,026 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:15:12,027 | INFO     | [monitor] control thread has ended
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:15:16,050 | INFO     | all workflow threads have been joined
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:15:16,050 | INFO     | end of generic workflow (traces error code: 0)
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:15:16,051 | INFO     | traces error code: 0
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:15:16,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:15:16,336 [wrapper] ==== pilot stdout END ====
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:15:16,357 [wrapper] ==== wrapper stdout RESUME ====
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:15:16,378 [wrapper] pilotpid: 6123
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:15:16,402 [wrapper] Pilot exit status: 0
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:15:16,536 [wrapper] pandaids: 6848018698
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:15:16,704 [wrapper] cleanup supervisor_pilot  6438 6124
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:15:16,728 [wrapper] Test setup, not cleaning
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:15:16,749 [wrapper] apfmon messages muted
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:15:16,768 [wrapper] ==== wrapper stdout END ====
2025-10-18 18:15:19 (19068): Guest Log: 2025-10-19 01:15:16,791 [wrapper] ==== wrapper stderr END ====
2025-10-18 18:15:19 (19068): Guest Log:  *** Error codes and diagnostics ***
2025-10-18 18:15:19 (19068): Guest Log:     "exeErrorCode": 0,
2025-10-18 18:15:19 (19068): Guest Log:     "exeErrorDiag": "",
2025-10-18 18:15:19 (19068): Guest Log:     "pilotErrorCode": 0,
2025-10-18 18:15:19 (19068): Guest Log:     "pilotErrorDiag": "",
2025-10-18 18:15:19 (19068): Guest Log:  *** Listing of results directory ***
2025-10-18 18:15:19 (19068): Guest Log: total 209736
2025-10-18 18:15:19 (19068): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 18 01:18 pilot3.tar.gz
2025-10-18 18:15:19 (19068): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 18 01:32 runpilot2-wrapper.sh
2025-10-18 18:15:19 (19068): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 18 01:32 queuedata.json
2025-10-18 18:15:19 (19068): Guest Log: -rwxr-xr-x. 1 atlas atlas      5778 Oct 18 16:50 init_data.xml
2025-10-18 18:15:19 (19068): Guest Log: -rwxr-xr-x. 1 atlas atlas    569675 Oct 18 16:50 input.tar.gz
2025-10-18 18:15:19 (19068): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 18 16:50 start_atlas.sh
2025-10-18 18:15:19 (19068): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 18 16:50 EVNT.46771634._001585.pool.root.1 -> /data/./ATLAS.root_0
2025-10-18 18:15:19 (19068): Guest Log: -rw-r--r--. 1 atlas atlas      2558 Oct 18 16:51 pandaJob.out
2025-10-18 18:15:19 (19068): Guest Log: -rw-------. 1 atlas atlas    976750 Oct 18 16:53 agis_schedconf.cvmfs.json
2025-10-18 18:15:19 (19068): Guest Log: drwx------. 5 atlas atlas      4096 Oct 18 16:53 pilot3
2025-10-18 18:15:19 (19068): Guest Log: -rw-------. 1 atlas atlas 202022070 Oct 19 01:11 HITS.46771637._035677.pool.root.1
2025-10-18 18:15:19 (19068): Guest Log: -rw-------. 1 atlas atlas      1035 Oct 19 01:13 memory_monitor_summary.json
2025-10-18 18:15:19 (19068): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 19 01:13 agis_ddmendpoints.agis.ALL.json
2025-10-18 18:15:19 (19068): Guest Log: -rw-------. 1 atlas atlas    671150 Oct 19 01:13 log.46771637._035677.job.log.tgz.1
2025-10-18 18:15:19 (19068): Guest Log: -rw-------. 1 atlas atlas      7843 Oct 19 01:14 heartbeat.json
2025-10-18 18:15:19 (19068): Guest Log: -rw-------. 1 atlas atlas        95 Oct 19 01:14 pilot_heartbeat.json
2025-10-18 18:15:19 (19068): Guest Log: -rw-------. 1 atlas atlas      4805 Oct 19 01:15 pilotlog.txt
2025-10-18 18:15:19 (19068): Guest Log: -rw-------. 1 atlas atlas   3787908 Oct 19 01:15 log.46771637._035677.job.log.1
2025-10-18 18:15:19 (19068): Guest Log: -rw-------. 1 atlas atlas       357 Oct 19 01:15 output.list
2025-10-18 18:15:19 (19068): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 19 01:15 runtime_log
2025-10-18 18:15:19 (19068): Guest Log: -rw-------. 1 atlas atlas   4474880 Oct 19 01:15 result.tar.gz
2025-10-18 18:15:19 (19068): Guest Log: -rw-------. 1 atlas atlas       656 Oct 19 01:15 w2MLDm9yAU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5gvNDmTTiZPn.diag
2025-10-18 18:15:19 (19068): Guest Log: -rw-r--r--. 1 atlas atlas      8628 Oct 19 01:15 runtime_log.err
2025-10-18 18:15:19 (19068): Guest Log: Looking for outputfile HITS.46771637._035677.pool.root.1
2025-10-18 18:15:19 (19068): Guest Log: HITS file was successfully produced
2025-10-18 18:15:19 (19068): Guest Log: -rw-------. 1 atlas atlas 202022070 Oct 19 01:11 /home/atlas/RunAtlas/HITS.46771637._035677.pool.root.1
2025-10-18 18:15:23 (19068): Guest Log: Successfully finished the ATLAS job!
2025-10-18 18:15:23 (19068): Guest Log: Copying the results back to the shared directory!
2025-10-18 18:15:24 (19068): Guest Log:  *** Contents of shared directory: ***
2025-10-18 18:15:24 (19068): Guest Log: total 425448
2025-10-18 18:15:24 (19068): Guest Log: -rwxrwxrwx. 1 root root 228558906 Oct 18 16:48 ATLAS.root_0
2025-10-18 18:15:24 (19068): Guest Log: -rwxrwxrwx. 1 root root 202022070 Oct 19 01:15 HITS.pool.root.1
2025-10-18 18:15:24 (19068): Guest Log: -rwxrwxrwx. 1 root root      5778 Oct 18 16:48 init_data.xml
2025-10-18 18:15:24 (19068): Guest Log: -rwxrwxrwx. 1 root root    569675 Oct 18 10:25 input.tar.gz
2025-10-18 18:15:24 (19068): Guest Log: -rwxrwxrwx. 1 root root   4474880 Oct 19 01:15 result.tar.gz
2025-10-18 18:15:24 (19068): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 18 10:25 start_atlas.sh
2025-10-18 18:15:24 (19068): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-18 18:15:24 (19068): VM Completion File Detected.
2025-10-18 18:15:24 (19068): Powering off VM.
2025-10-18 18:15:26 (19068): Successfully stopped VM.
2025-10-18 18:15:26 (19068): Deregistering VM. (boinc_59447867a826a67f, slot#50)
2025-10-18 18:15:26 (19068): Removing network bandwidth throttle group from VM.
2025-10-18 18:15:26 (19068): Removing VM from VirtualBox.
2025-10-18 18:15:31 (19068): called boinc_finish(0)

</stderr_txt>
]]>

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