Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:13:15 (2416671): wrapper (7.7.26015): starting
04:13:15 (2416671): wrapper: running run_atlas (--nthreads 4)
[2025-10-19 04:13:15] Arguments: --nthreads 4
[2025-10-19 04:13:15] Threads: 4
[2025-10-19 04:13:15] Checking for CVMFS
[2025-10-19 04:13:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-19 04:13:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-19 04:13:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-19 04:13:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-19 04:13:16] 2.9.2.0 965540 4443 97800 151871 3 57 27575314 36864001 0 130560 0 3669023 99.991 162341 2993 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-19 04:13:16] CVMFS is ok
[2025-10-19 04:13:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-19 04:13:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-19 04:13:16] Further information can be found at the LHC@home message board.
[2025-10-19 04:13:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-19 04:13:16] Checking for apptainer binary...
[2025-10-19 04:13:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-19 04:13:16] Running /usr/bin/apptainer --version
[2025-10-19 04:13:16] apptainer version 1.4.1-1.1
[2025-10-19 04:13:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-19 04:13:16] thA350a
[2025-10-19 04:13:16] apptainer works
[2025-10-19 04:13:16] Set ATHENA_PROC_NUMBER=4
[2025-10-19 04:13:16] Set ATHENA_CORE_NUMBER=4
[2025-10-19 04:13:16] Starting ATLAS job with PandaID=6848022099
[2025-10-19 04:13:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-19 05:29:36]  *** The last 200 lines of the pilot log: ***
[2025-10-19 05:29:36]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6848022099/log.46771637._037814.job.log.tgz.1
[2025-10-19 05:29:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/61/log.46771637._037814.job.log.tgz.1
[2025-10-19 05:29:36]  workdir=None
[2025-10-19 05:29:36] ]
[2025-10-19 05:29:36] 2025-10-19 03:28:30,944 | INFO     | time since job start (4506s) is within the limit (172800.0s)
[2025-10-19 05:29:36] 2025-10-19 03:28:30,967 | INFO     | transferring file log.46771637._037814.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6848022099/log.46771637._037814.job.log.tgz.1 to /local/data/boinc/
[2025-10-19 05:29:36] 2025-10-19 03:28:30,967 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6848022099/log.46771637._037814.job.log.tgz.1 /local/data/boinc/slots/0/log.46771637._0378
[2025-10-19 05:29:36] 2025-10-19 03:28:30,985 | INFO     | adding to output.list: log.46771637._037814.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/61/log.46771637._037814.job.log.tg
[2025-10-19 05:29:36] 2025-10-19 03:28:30,986 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-19 05:29:36] 2025-10-19 03:28:30,986 | INFO     | summary of transferred files:
[2025-10-19 05:29:36] 2025-10-19 03:28:30,986 | INFO     |  -- lfn=log.46771637._037814.job.log.tgz.1, status_code=0, status=transferred
[2025-10-19 05:29:36] 2025-10-19 03:28:30,986 | INFO     | stage-out finished correctly
[2025-10-19 05:29:36] 2025-10-19 03:28:32,793 | INFO     | monitor loop #348: job 0:6848022099 is in state 'finished'
[2025-10-19 05:29:36] 2025-10-19 03:28:32,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 05:29:36] 2025-10-19 03:28:32,950 | INFO     | time since job start (4508s) is within the limit (172800.0s)
[2025-10-19 05:29:36] 2025-10-19 03:28:34,152 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-19 05:29:36] 2025-10-19 03:28:34,956 | INFO     | time since job start (4510s) is within the limit (172800.0s)
[2025-10-19 05:29:36] 2025-10-19 03:28:35,297 | INFO     | monitor loop #349: job 0:6848022099 is in state 'finished'
[2025-10-19 05:29:36] 2025-10-19 03:28:35,298 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 05:29:36] 2025-10-19 03:28:36,947 | INFO     | job 6848022099 has state=finished
[2025-10-19 05:29:36] 2025-10-19 03:28:36,948 | INFO     | preparing for final server update for job 6848022099 in state='finished'
[2025-10-19 05:29:36] 2025-10-19 03:28:36,948 | INFO     | this job has now completed (state=finished)
[2025-10-19 05:29:36] 2025-10-19 03:28:36,948 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-19 05:29:36] 2025-10-19 03:28:36,948 | INFO     | log transfer has been attempted: DONE
[2025-10-19 05:29:36] 2025-10-19 03:28:36,948 | INFO     | job 6848022099 has finished - writing final server update
[2025-10-19 05:29:36] 2025-10-19 03:28:36,949 | INFO     | total number of processed events: 400 (read)
[2025-10-19 05:29:36] 2025-10-19 03:28:36,949 | INFO     | executing command: lscpu
[2025-10-19 05:29:36] 2025-10-19 03:28:36,962 | INFO     | time since job start (4512s) is within the limit (172800.0s)
[2025-10-19 05:29:36] 2025-10-19 03:28:36,971 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-19 05:29:36] 2025-10-19 03:28:37,800 | INFO     | monitor loop #350: job 0:6848022099 is in state 'finished'
[2025-10-19 05:29:36] 2025-10-19 03:28:37,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 05:29:36] 2025-10-19 03:28:38,030 | INFO     | PID=2420471 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-19 05:29:36] 2025-10-19 03:28:39,030 | INFO     | time since job start (4515s) is within the limit (172800.0s)
[2025-10-19 05:29:36] 2025-10-19 03:28:40,303 | INFO     | monitor loop #351: job 0:6848022099 is in state 'finished'
[2025-10-19 05:29:36] 2025-10-19 03:28:40,303 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-19 05:29:36] 2025-10-19 03:28:41,036 | INFO     | time since job start (4517s) is within the limit (172800.0s)
[2025-10-19 05:29:36] 2025-10-19 03:28:41,527 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-19 05:29:36] 2025-10-19 03:28:41,529 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3246.8115624999996
[2025-10-19 05:29:36] 2025-10-19 03:28:41,530 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6848022099/memory_monitor_summary.json (trf name=prmon)
[2025-10-19 05:29:36] 2025-10-19 03:28:41,531 | INFO     | extracted standard info from prmon json
[2025-10-19 05:29:36] 2025-10-19 03:28:41,531 | INFO     | extracted standard memory fields from prmon json
[2025-10-19 05:29:36] 2025-10-19 03:28:41,531 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-19 05:29:36] 2025-10-19 03:28:41,531 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-19 05:29:36] 2025-10-19 03:28:41,531 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-19 05:29:36] 2025-10-19 03:28:41,531 | INFO     | fitting pss+swap vs Time
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | sum of square deviations: 93240818.0
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | sum of deviations: -1687876405.0000002
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | mean x: 1760842346.0
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | mean y: 2510601.104477612
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | -- intersect: 31877866400.08778
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | intersect: 31877866400.08778
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | chi2: 0.02011426274774976
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | -- intersect: 31877866400.08778
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | current memory leak: -18.10 B/s (using 67 data points, chi2=0.02)
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | could have reported an average CPU frequency of 3669 MHz (6 samples)
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | ..............................
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | . Timing measurements:
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | . get job = 0 s
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | . initial setup = 1 s
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | . payload setup = 4 s
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | . stage-in = 0 s
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | . payload execution = 4483 s
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | . stage-out = 0 s
[2025-10-19 05:29:36] 2025-10-19 03:28:41,532 | INFO     | . log creation = 0 s
[2025-10-19 05:29:36] 2025-10-19 03:28:41,533 | INFO     | ..............................
[2025-10-19 05:29:36] 2025-10-19 03:28:41,709 | INFO     | 
[2025-10-19 05:29:36] 2025-10-19 03:28:41,709 | INFO     | job summary report
[2025-10-19 05:29:36] 2025-10-19 03:28:41,709 | INFO     | --------------------------------------------------
[2025-10-19 05:29:36] 2025-10-19 03:28:41,709 | INFO     | PanDA job id: 6848022099
[2025-10-19 05:29:36] 2025-10-19 03:28:41,709 | INFO     | task id: 46771637
[2025-10-19 05:29:36] 2025-10-19 03:28:41,709 | INFO     | errors: (none)
[2025-10-19 05:29:36] 2025-10-19 03:28:41,709 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-19 05:29:36] 2025-10-19 03:28:41,709 | INFO     | pilot state: finished 
[2025-10-19 05:29:36] 2025-10-19 03:28:41,709 | INFO     | transexitcode: 0
[2025-10-19 05:29:36] 2025-10-19 03:28:41,709 | INFO     | exeerrorcode: 0
[2025-10-19 05:29:36] 2025-10-19 03:28:41,709 | INFO     | exeerrordiag: 
[2025-10-19 05:29:36] 2025-10-19 03:28:41,709 | INFO     | exitcode: 0
[2025-10-19 05:29:36] 2025-10-19 03:28:41,709 | INFO     | exitmsg: OK
[2025-10-19 05:29:36] 2025-10-19 03:28:41,709 | INFO     | cpuconsumptiontime: 17051 s
[2025-10-19 05:29:36] 2025-10-19 03:28:41,710 | INFO     | nevents: 400
[2025-10-19 05:29:36] 2025-10-19 03:28:41,710 | INFO     | neventsw: 0
[2025-10-19 05:29:36] 2025-10-19 03:28:41,710 | INFO     | pid: 2427049
[2025-10-19 05:29:36] 2025-10-19 03:28:41,710 | INFO     | pgrp: 2427049
[2025-10-19 05:29:36] 2025-10-19 03:28:41,710 | INFO     | corecount: 4
[2025-10-19 05:29:36] 2025-10-19 03:28:41,710 | INFO     | event service: False
[2025-10-19 05:29:36] 2025-10-19 03:28:41,710 | INFO     | sizes: {0: 2348930, 4: 2349192, 11: 2349220, 4491: 2375492, 4492: 2384496, 4495: 2384552, 4502: 2384874}
[2025-10-19 05:29:36] 2025-10-19 03:28:41,710 | INFO     | --------------------------------------------------
[2025-10-19 05:29:36] 2025-10-19 03:28:41,710 | INFO     | 
[2025-10-19 05:29:36] 2025-10-19 03:28:41,710 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-19 05:29:36] 2025-10-19 03:28:41,730 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | job 6848022099 has completed (purged errors)
[2025-10-19 05:29:36] 2025-10-19 03:28:41,731 | INFO     | overall cleanup function is called
[2025-10-19 05:29:36] 2025-10-19 03:28:42,738 | INFO     | --- collectZombieJob: --- 10, [2427049]
[2025-10-19 05:29:36] 2025-10-19 03:28:42,738 | INFO     | zombie collector waiting for pid 2427049
[2025-10-19 05:29:36] 2025-10-19 03:28:42,738 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-19 05:29:36] 2025-10-19 03:28:42,738 | INFO     | collected zombie processes
[2025-10-19 05:29:36] 2025-10-19 03:28:42,739 | INFO     | will attempt to kill all subprocesses of pid=2427049
[2025-10-19 05:29:36] 2025-10-19 03:28:42,788 | INFO     | process IDs to be killed: [2427049] (in reverse order)
[2025-10-19 05:29:36] 2025-10-19 03:28:42,823 | WARNING  | found no corresponding commands to process id(s)
[2025-10-19 05:29:36] 2025-10-19 03:28:42,823 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-19 05:29:36] 2025-10-19 03:28:42,825 | INFO     | did not find any defunct processes belonging to 2427049
[2025-10-19 05:29:36] 2025-10-19 03:28:42,826 | INFO     | did not find any defunct processes belonging to 2427049
[2025-10-19 05:29:36] 2025-10-19 03:28:42,826 | INFO     | ready for new job
[2025-10-19 05:29:36] 2025-10-19 03:28:42,826 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-19 05:29:36] 2025-10-19 03:28:42,827 | INFO     | ***************************************
[2025-10-19 05:29:36] 2025-10-19 03:28:42,827 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-19 05:29:36] 2025-10-19 03:28:42,827 | INFO     | ***************************************
[2025-10-19 05:29:36] 2025-10-19 03:28:42,827 | INFO     | 
[2025-10-19 05:29:36] 2025-10-19 03:28:42,828 | INFO     | architecture information:
[2025-10-19 05:29:36] 2025-10-19 03:28:42,828 | INFO     | executing command: cat /etc/os-release
[2025-10-19 05:29:36] 2025-10-19 03:28:42,842 | INFO     | cat /etc/os-release:
[2025-10-19 05:29:36] NAME="CentOS Linux"
[2025-10-19 05:29:36] VERSION="7 (Core)"
[2025-10-19 05:29:36] ID="centos"
[2025-10-19 05:29:36] ID_LIKE="rhel fedora"
[2025-10-19 05:29:36] VERSION_ID="7"
[2025-10-19 05:29:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-19 05:29:36] ANSI_COLOR="0;31"
[2025-10-19 05:29:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-19 05:29:36] HOME_URL="https://www.centos.org/"
[2025-10-19 05:29:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-19 05:29:36] 
[2025-10-19 05:29:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-19 05:29:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-19 05:29:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-19 05:29:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-19 05:29:36] 
[2025-10-19 05:29:36] 2025-10-19 03:28:42,842 | INFO     | ***************************************
[2025-10-19 05:29:36] 2025-10-19 03:28:43,345 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-19 05:29:36] 2025-10-19 03:28:43,363 | INFO     | sufficient remaining disk space (231475249152 B)
[2025-10-19 05:29:36] 2025-10-19 03:28:43,363 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-19 05:29:36] 2025-10-19 03:28:43,363 | INFO     | current server update state: UPDATING_FINAL
[2025-10-19 05:29:36] 2025-10-19 03:28:43,363 | INFO     | update_server=False
[2025-10-19 05:29:36] 2025-10-19 03:28:43,363 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-19 05:29:36] 2025-10-19 03:28:43,364 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-19 05:29:36] 2025-10-19 03:28:43,562 | INFO     | all data control threads have been joined
[2025-10-19 05:29:36] 2025-10-19 03:28:43,686 | INFO     | all job control threads have been joined
[2025-10-19 05:29:36] 2025-10-19 03:28:43,812 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-19 05:29:36] 2025-10-19 03:28:43,812 | INFO     | aborting loop
[2025-10-19 05:29:36] 2025-10-19 03:28:44,053 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-19 05:29:36] 2025-10-19 03:28:44,312 | INFO     | all payload control threads have been joined
[2025-10-19 05:29:36] 2025-10-19 03:28:44,369 | INFO     | [job] retrieve thread has finished
[2025-10-19 05:29:36] 2025-10-19 03:28:44,370 | INFO     | [job] queue monitor thread has finished
[2025-10-19 05:29:36] 2025-10-19 03:28:44,370 | INFO     | [job] create_data_payload thread has finished
[2025-10-19 05:29:36] 2025-10-19 03:28:44,471 | INFO     | [payload] validate_pre thread has finished
[2025-10-19 05:29:36] 2025-10-19 03:28:44,538 | INFO     | [payload] failed_post thread has finished
[2025-10-19 05:29:36] 2025-10-19 03:28:44,567 | INFO     | [data] control thread has finished
[2025-10-19 05:29:36] 2025-10-19 03:28:44,691 | INFO     | [job] control thread has finished
[2025-10-19 05:29:36] 2025-10-19 03:28:44,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-19 05:29:36] 2025-10-19 03:28:44,818 | INFO     | [payload] execute_payloads thread has finished
[2025-10-19 05:29:36] 2025-10-19 03:28:44,818 | INFO     | [job] job monitor thread has finished
[2025-10-19 05:29:36] 2025-10-19 03:28:45,063 | INFO     | [data] copytool_in thread has finished
[2025-10-19 05:29:36] 2025-10-19 03:28:45,317 | INFO     | [payload] control thread has finished
[2025-10-19 05:29:36] 2025-10-19 03:28:45,735 | INFO     | [payload] validate_post thread has finished
[2025-10-19 05:29:36] 2025-10-19 03:28:45,772 | INFO     | [job] validate thread has finished
[2025-10-19 05:29:36] 2025-10-19 03:28:46,060 | INFO     | [data] copytool_out thread has finished
[2025-10-19 05:29:36] 2025-10-19 03:28:48,707 | INFO     | [data] queue_monitor thread has finished
[2025-10-19 05:29:36] 2025-10-19 03:28:54,285 | INFO     | job.realtimelogging is not enabled
[2025-10-19 05:29:36] 2025-10-19 03:28:55,291 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-19 05:29:36] 2025-10-19 03:29:14,176 | INFO     | PID=2420471 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-19 05:29:36] 2025-10-19 03:29:14,177 | INFO     | found 0 job(s) in 20 queues
[2025-10-19 05:29:36] 2025-10-19 03:29:14,177 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-19 05:29:36] 2025-10-19 03:29:14,177 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-19 05:29:36] 2025-10-19 03:29:29,827 | INFO     | [monitor] cgroup control has ended
[2025-10-19 05:29:36] 2025-10-19 03:29:31,446 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140129323542336)>', '<ExcThread(monitor, started 140128508950272)>']
[2025-10-19 05:29:36] 2025-10-19 03:29:32,270 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-19 05:29:36] 2025-10-19 03:29:32,270 | INFO     | [monitor] control thread has ended
[2025-10-19 05:29:36] 2025-10-19 03:29:36,472 | INFO     | all workflow threads have been joined
[2025-10-19 05:29:36] 2025-10-19 03:29:36,472 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-19 05:29:36] 2025-10-19 03:29:36,472 | INFO     | traces error code: 0
[2025-10-19 05:29:36] 2025-10-19 03:29:36,472 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-19 05:29:36] 2025-10-19 03:29:36,554 [wrapper] ==== pilot stdout END ====
[2025-10-19 05:29:36] 2025-10-19 03:29:36,558 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-19 05:29:36] 2025-10-19 03:29:36,562 [wrapper] pilotpid: 2420471
[2025-10-19 05:29:36] 2025-10-19 03:29:36,566 [wrapper] Pilot exit status: 0
[2025-10-19 05:29:36] 2025-10-19 03:29:36,578 [wrapper] pandaids: 6848022099
[2025-10-19 05:29:36] 2025-10-19 03:29:36,604 [wrapper] cleanup supervisor_pilot 2439305 2420472
[2025-10-19 05:29:36] 2025-10-19 03:29:36,608 [wrapper] Test setup, not cleaning
[2025-10-19 05:29:36] 2025-10-19 03:29:36,612 [wrapper] apfmon messages muted
[2025-10-19 05:29:36] 2025-10-19 03:29:36,616 [wrapper] ==== wrapper stdout END ====
[2025-10-19 05:29:36] 2025-10-19 03:29:36,620 [wrapper] ==== wrapper stderr END ====
[2025-10-19 05:29:36]  *** Error codes and diagnostics ***
[2025-10-19 05:29:36]     "exeErrorCode": 0,
[2025-10-19 05:29:36]     "exeErrorDiag": "",
[2025-10-19 05:29:36]     "pilotErrorCode": 0,
[2025-10-19 05:29:36]     "pilotErrorDiag": "",
[2025-10-19 05:29:36]  *** Listing of results directory ***
[2025-10-19 05:29:36] total 428936
[2025-10-19 05:29:36] -rw-r--r-- 1 boinc boinc    557409 Oct 18 06:55 pilot3.tar.gz
[2025-10-19 05:29:36] -rwx------ 1 boinc boinc     36292 Oct 18 06:59 runpilot2-wrapper.sh
[2025-10-19 05:29:36] -rw-r--r-- 1 boinc boinc      5112 Oct 18 06:59 queuedata.json
[2025-10-19 05:29:36] -rw-r--r-- 1 boinc boinc       100 Oct 19 04:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-19 05:29:36] -rwxr-xr-x 1 boinc boinc      7986 Oct 19 04:13 run_atlas
[2025-10-19 05:29:36] -rw-r--r-- 1 boinc boinc       105 Oct 19 04:13 job.xml
[2025-10-19 05:29:36] -rw-r--r-- 2 boinc boinc 230343014 Oct 19 04:13 EVNT.46771634._001650.pool.root.1
[2025-10-19 05:29:36] drwxrwx--x 2 boinc boinc      4096 Oct 19 04:13 shared
[2025-10-19 05:29:36] -rw-r--r-- 2 boinc boinc    569669 Oct 19 04:13 input.tar.gz
[2025-10-19 05:29:36] -rw-r--r-- 2 boinc boinc     15120 Oct 19 04:13 start_atlas.sh
[2025-10-19 05:29:36] -rw-r--r-- 1 boinc boinc         0 Oct 19 04:13 boinc_setup_complete
[2025-10-19 05:29:36] -rw-r--r-- 1 boinc boinc      6379 Oct 19 04:13 init_data.xml
[2025-10-19 05:29:36] -rw-r--r-- 1 boinc boinc         0 Oct 19 04:13 boinc_lockfile
[2025-10-19 05:29:36] -rw-r--r-- 1 boinc boinc      2557 Oct 19 04:13 pandaJob.out
[2025-10-19 05:29:36] -rw------- 1 boinc boinc    976750 Oct 19 04:13 agis_schedconf.cvmfs.json
[2025-10-19 05:29:36] -rw------- 1 boinc boinc   1560740 Oct 19 04:13 agis_ddmendpoints.agis.ALL.json
[2025-10-19 05:29:36] drwx------ 5 boinc boinc      4096 Oct 19 04:13 pilot3
[2025-10-19 05:29:36] -rw------- 1 boinc boinc 203147260 Oct 19 05:28 HITS.46771637._037814.pool.root.1
[2025-10-19 05:29:36] -rw-r--r-- 1 boinc boinc       529 Oct 19 05:28 boinc_task_state.xml
[2025-10-19 05:29:36] -rw------- 1 boinc boinc      1019 Oct 19 05:28 memory_monitor_summary.json
[2025-10-19 05:29:36] -rw------- 1 boinc boinc    248897 Oct 19 05:28 log.46771637._037814.job.log.tgz.1
[2025-10-19 05:29:36] -rw------- 1 boinc boinc      7752 Oct 19 05:28 heartbeat.json
[2025-10-19 05:29:36] -rw-r--r-- 1 boinc boinc        27 Oct 19 05:29 wrapper_checkpoint.txt
[2025-10-19 05:29:36] -rw-r--r-- 1 boinc boinc      8192 Oct 19 05:29 boinc_mmap_file
[2025-10-19 05:29:36] -rw------- 1 boinc boinc        95 Oct 19 05:29 pilot_heartbeat.json
[2025-10-19 05:29:36] -rw------- 1 boinc boinc      4824 Oct 19 05:29 pilotlog.txt
[2025-10-19 05:29:36] -rw------- 1 boinc boinc    668413 Oct 19 05:29 log.46771637._037814.job.log.1
[2025-10-19 05:29:36] -rw------- 1 boinc boinc       357 Oct 19 05:29 output.list
[2025-10-19 05:29:36] -rw-r--r-- 1 boinc boinc       620 Oct 19 05:29 runtime_log
[2025-10-19 05:29:36] -rw------- 1 boinc boinc    931840 Oct 19 05:29 result.tar.gz
[2025-10-19 05:29:36] -rw-r--r-- 1 boinc boinc      8782 Oct 19 05:29 runtime_log.err
[2025-10-19 05:29:36] -rw------- 1 boinc boinc       659 Oct 19 05:29 2UcNDmlDEU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3DwNDm8Xo45m.diag
[2025-10-19 05:29:36] -rw-r--r-- 1 boinc boinc     22359 Oct 19 05:29 stderr.txt
[2025-10-19 05:29:36] HITS file was successfully produced:
[2025-10-19 05:29:36] -rw------- 1 boinc boinc 203147260 Oct 19 05:28 shared/HITS.pool.root.1
[2025-10-19 05:29:36]  *** Contents of shared directory: ***
[2025-10-19 05:29:36] total 424832
[2025-10-19 05:29:36] -rw-r--r-- 2 boinc boinc 230343014 Oct 19 04:13 ATLAS.root_0
[2025-10-19 05:29:36] -rw-r--r-- 2 boinc boinc    569669 Oct 19 04:13 input.tar.gz
[2025-10-19 05:29:36] -rw-r--r-- 2 boinc boinc     15120 Oct 19 04:13 start_atlas.sh
[2025-10-19 05:29:36] -rw------- 1 boinc boinc 203147260 Oct 19 05:28 HITS.pool.root.1
[2025-10-19 05:29:36] -rw------- 1 boinc boinc    931840 Oct 19 05:29 result.tar.gz
05:29:37 (2416671): run_atlas exited; CPU time 17068.535209
05:29:37 (2416671): called boinc_finish(0)

</stderr_txt>
]]>

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