Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:55:48 (2423): wrapper (7.7.26015): starting
04:55:48 (2423): wrapper: running run_atlas (--nthreads 8)
[2025-10-18 04:55:48] Arguments: --nthreads 8
[2025-10-18 04:55:48] Threads: 8
[2025-10-18 04:55:48] Checking for CVMFS
[2025-10-18 04:55:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 04:55:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 04:55:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 04:55:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 04:55:48] 2.11.2.0 2765 10874 76836 151844 0 59 17862928 20275200 1 130560 0 6446580 99.972 676774 38405 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 04:55:48] CVMFS is ok
[2025-10-18 04:55:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 04:55:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 04:55:48] Further information can be found at the LHC@home message board.
[2025-10-18 04:55:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 04:55:48] Checking for apptainer binary...
[2025-10-18 04:55:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 04:55:48] Running /usr/bin/apptainer --version
[2025-10-18 04:55:48] apptainer version 1.3.2-1.el7
[2025-10-18 04:55:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 04:55:50] c-204-21.aglt2.org
[2025-10-18 04:55:50] apptainer works
[2025-10-18 04:55:50] Set ATHENA_PROC_NUMBER=8
[2025-10-18 04:55:50] Set ATHENA_CORE_NUMBER=8
[2025-10-18 04:55:50] Starting ATLAS job with PandaID=6848020312
[2025-10-18 04:55:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 07:08:27]  *** The last 200 lines of the pilot log: ***
[2025-10-18 07:08:27] 2025-10-18 11:07:18,301 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 07:08:27] 2025-10-18 11:07:18,305 | INFO     | fitting pss+swap vs Time
[2025-10-18 07:08:27] 2025-10-18 11:07:18,305 | INFO     | sum of square deviations: 665612480.0
[2025-10-18 07:08:27] 2025-10-18 11:07:18,306 | INFO     | sum of deviations: -1152171965.0
[2025-10-18 07:08:27] 2025-10-18 11:07:18,306 | INFO     | mean x: 1760781703.0
[2025-10-18 07:08:27] 2025-10-18 11:07:18,306 | INFO     | mean y: 2477332.3565891474
[2025-10-18 07:08:27] 2025-10-18 11:07:18,306 | INFO     | -- intersect: 3050381894.905591
[2025-10-18 07:08:27] 2025-10-18 11:07:18,306 | INFO     | intersect: 3050381894.905591
[2025-10-18 07:08:27] 2025-10-18 11:07:18,307 | INFO     | chi2: 2.2744026413422915
[2025-10-18 07:08:27] 2025-10-18 11:07:18,307 | INFO     | sum of square deviations: 591173875.0
[2025-10-18 07:08:27] 2025-10-18 11:07:18,307 | INFO     | sum of deviations: 7245742839.499999
[2025-10-18 07:08:27] 2025-10-18 11:07:18,308 | INFO     | mean x: 1760781550.5
[2025-10-18 07:08:27] 2025-10-18 11:07:18,308 | INFO     | mean y: 2493990.620967742
[2025-10-18 07:08:27] 2025-10-18 11:07:18,308 | INFO     | -- intersect: -21578585368.576157
[2025-10-18 07:08:27] 2025-10-18 11:07:18,308 | INFO     | intersect: -21578585368.576157
[2025-10-18 07:08:27] 2025-10-18 11:07:18,308 | INFO     | chi2: 1.5109241546486685
[2025-10-18 07:08:27] 2025-10-18 11:07:18,308 | INFO     | current chi2=1.5109241546486685 (change=33.568308126965526 %)
[2025-10-18 07:08:27] 2025-10-18 11:07:18,309 | INFO     | sum of square deviations: 522502820.0
[2025-10-18 07:08:27] 2025-10-18 11:07:18,309 | INFO     | sum of deviations: 6981136215.999998
[2025-10-18 07:08:27] 2025-10-18 11:07:18,309 | INFO     | mean x: 1760781398.0
[2025-10-18 07:08:27] 2025-10-18 11:07:18,309 | INFO     | mean y: 2493402.705882353
[2025-10-18 07:08:27] 2025-10-18 11:07:18,310 | INFO     | -- intersect: -23523226106.400127
[2025-10-18 07:08:27] 2025-10-18 11:07:18,310 | INFO     | intersect: -23523226106.400127
[2025-10-18 07:08:27] 2025-10-18 11:07:18,310 | INFO     | chi2: 1.5131225197188858
[2025-10-18 07:08:27] 2025-10-18 11:07:18,310 | INFO     | current chi2=1.5131225197188858 (change=-0.14549804260217764 %)
[2025-10-18 07:08:27] 2025-10-18 11:07:18,310 | INFO     | right removable region: 118
[2025-10-18 07:08:27] 2025-10-18 11:07:18,310 | INFO     | sum of square deviations: 591173875.0
[2025-10-18 07:08:27] 2025-10-18 11:07:18,311 | INFO     | sum of deviations: -19361005970.5
[2025-10-18 07:08:27] 2025-10-18 11:07:18,311 | INFO     | mean x: 1760781855.5
[2025-10-18 07:08:27] 2025-10-18 11:07:18,311 | INFO     | mean y: 2513930.056451613
[2025-10-18 07:08:27] 2025-10-18 11:07:18,311 | INFO     | -- intersect: 57668303063.724724
[2025-10-18 07:08:27] 2025-10-18 11:07:18,312 | INFO     | intersect: 57668303063.724724
[2025-10-18 07:08:27] 2025-10-18 11:07:18,312 | INFO     | chi2: 0.894528258801416
[2025-10-18 07:08:27] 2025-10-18 11:07:18,312 | INFO     | current chi2=0.894528258801416 (change=60.669749386437154 %)
[2025-10-18 07:08:27] 2025-10-18 11:07:18,312 | INFO     | sum of square deviations: 522502820.0
[2025-10-18 07:08:27] 2025-10-18 11:07:18,313 | INFO     | sum of deviations: -15372796538.0
[2025-10-18 07:08:27] 2025-10-18 11:07:18,313 | INFO     | mean x: 1760782008.0
[2025-10-18 07:08:27] 2025-10-18 11:07:18,313 | INFO     | mean y: 2505050.529411765
[2025-10-18 07:08:27] 2025-10-18 11:07:18,313 | INFO     | -- intersect: 51807284892.20584
[2025-10-18 07:08:27] 2025-10-18 11:07:18,313 | INFO     | intersect: 51807284892.20584
[2025-10-18 07:08:27] 2025-10-18 11:07:18,313 | INFO     | chi2: 0.8822492071966308
[2025-10-18 07:08:27] 2025-10-18 11:07:18,314 | INFO     | current chi2=0.8822492071966308 (change=1.3726845948095514 %)
[2025-10-18 07:08:27] 2025-10-18 11:07:18,314 | INFO     | left removable region: 20
[2025-10-18 07:08:27] 2025-10-18 11:07:18,314 | INFO     | sum of square deviations: 291817564.5
[2025-10-18 07:08:27] 2025-10-18 11:07:18,314 | INFO     | sum of deviations: 1165800585.0
[2025-10-18 07:08:27] 2025-10-18 11:07:18,314 | INFO     | mean x: 1760781977.5
[2025-10-18 07:08:27] 2025-10-18 11:07:18,315 | INFO     | mean y: 2500709.326530612
[2025-10-18 07:08:27] 2025-10-18 11:07:18,315 | INFO     | -- intersect: -7031759421.464729
[2025-10-18 07:08:27] 2025-10-18 11:07:18,315 | INFO     | intersect: -7031759421.464729
[2025-10-18 07:08:27] 2025-10-18 11:07:18,315 | INFO     | chi2: 0.000365571880741844
[2025-10-18 07:08:27] 2025-10-18 11:07:18,315 | INFO     | -- intersect: -7031759421.464729
[2025-10-18 07:08:27] 2025-10-18 11:07:18,315 | INFO     | current memory leak: 3.99 B/s (using 98 data points, chi2=0.00)
[2025-10-18 07:08:27] 2025-10-18 11:07:18,316 | INFO     | could have reported an average CPU frequency of 1991 MHz (8 samples)
[2025-10-18 07:08:27] 2025-10-18 11:07:18,316 | INFO     | ..............................
[2025-10-18 07:08:27] 2025-10-18 11:07:18,316 | INFO     | . Timing measurements:
[2025-10-18 07:08:27] 2025-10-18 11:07:18,316 | INFO     | . get job = 0 s
[2025-10-18 07:08:27] 2025-10-18 11:07:18,316 | INFO     | . initial setup = 2 s
[2025-10-18 07:08:27] 2025-10-18 11:07:18,316 | INFO     | . payload setup = 8 s
[2025-10-18 07:08:27] 2025-10-18 11:07:18,316 | INFO     | . stage-in = 0 s
[2025-10-18 07:08:27] 2025-10-18 11:07:18,317 | INFO     | . payload execution = 7830 s
[2025-10-18 07:08:27] 2025-10-18 11:07:18,317 | INFO     | . stage-out = 0 s
[2025-10-18 07:08:27] 2025-10-18 11:07:18,317 | INFO     | . log creation = 0 s
[2025-10-18 07:08:27] 2025-10-18 11:07:18,317 | INFO     | ..............................
[2025-10-18 07:08:27] 2025-10-18 11:07:18,473 | INFO     | 
[2025-10-18 07:08:27] 2025-10-18 11:07:18,473 | INFO     | job summary report
[2025-10-18 07:08:27] 2025-10-18 11:07:18,474 | INFO     | --------------------------------------------------
[2025-10-18 07:08:27] 2025-10-18 11:07:18,474 | INFO     | PanDA job id: 6848020312
[2025-10-18 07:08:27] 2025-10-18 11:07:18,474 | INFO     | task id: 46771637
[2025-10-18 07:08:27] 2025-10-18 11:07:18,474 | INFO     | errors: (none)
[2025-10-18 07:08:27] 2025-10-18 11:07:18,474 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 07:08:27] 2025-10-18 11:07:18,474 | INFO     | pilot state: finished 
[2025-10-18 07:08:27] 2025-10-18 11:07:18,475 | INFO     | transexitcode: 0
[2025-10-18 07:08:27] 2025-10-18 11:07:18,475 | INFO     | exeerrorcode: 0
[2025-10-18 07:08:27] 2025-10-18 11:07:18,475 | INFO     | exeerrordiag: 
[2025-10-18 07:08:27] 2025-10-18 11:07:18,475 | INFO     | exitcode: 0
[2025-10-18 07:08:27] 2025-10-18 11:07:18,475 | INFO     | exitmsg: OK
[2025-10-18 07:08:27] 2025-10-18 11:07:18,475 | INFO     | cpuconsumptiontime: 59267 s
[2025-10-18 07:08:27] 2025-10-18 11:07:18,475 | INFO     | nevents: 400
[2025-10-18 07:08:27] 2025-10-18 11:07:18,476 | INFO     | neventsw: 0
[2025-10-18 07:08:27] 2025-10-18 11:07:18,476 | INFO     | pid: 12601
[2025-10-18 07:08:27] 2025-10-18 11:07:18,476 | INFO     | pgrp: 12601
[2025-10-18 07:08:27] 2025-10-18 11:07:18,476 | INFO     | corecount: 8
[2025-10-18 07:08:27] 2025-10-18 11:07:18,476 | INFO     | event service: False
[2025-10-18 07:08:27] 2025-10-18 11:07:18,476 | INFO     | sizes: {0: 2348758, 1: 2348957, 6: 2349219, 11: 2349247, 7842: 2376877, 7845: 2385875, 7847: 2386059, 7853: 2386253}
[2025-10-18 07:08:27] 2025-10-18 11:07:18,476 | INFO     | --------------------------------------------------
[2025-10-18 07:08:27] 2025-10-18 11:07:18,477 | INFO     | 
[2025-10-18 07:08:27] 2025-10-18 11:07:18,477 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 07:08:27] 2025-10-18 11:07:18,502 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,502 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,502 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,502 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,502 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,503 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,504 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,504 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,504 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,504 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,504 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,504 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,505 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 07:08:27] 2025-10-18 11:07:18,505 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,505 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 07:08:27] 2025-10-18 11:07:18,505 | INFO     | job 6848020312 has completed (purged errors)
[2025-10-18 07:08:27] 2025-10-18 11:07:18,505 | INFO     | overall cleanup function is called
[2025-10-18 07:08:27] 2025-10-18 11:07:19,514 | INFO     | --- collectZombieJob: --- 10, [12601]
[2025-10-18 07:08:27] 2025-10-18 11:07:19,514 | INFO     | zombie collector waiting for pid 12601
[2025-10-18 07:08:27] 2025-10-18 11:07:19,514 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 07:08:27] 2025-10-18 11:07:19,514 | INFO     | collected zombie processes
[2025-10-18 07:08:27] 2025-10-18 11:07:19,514 | INFO     | will attempt to kill all subprocesses of pid=12601
[2025-10-18 07:08:27] 2025-10-18 11:07:19,601 | INFO     | process IDs to be killed: [12601] (in reverse order)
[2025-10-18 07:08:27] 2025-10-18 11:07:19,662 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 07:08:27] 2025-10-18 11:07:19,663 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 07:08:27] 2025-10-18 11:07:19,667 | INFO     | did not find any defunct processes belonging to 12601
[2025-10-18 07:08:27] 2025-10-18 11:07:19,670 | INFO     | did not find any defunct processes belonging to 12601
[2025-10-18 07:08:27] 2025-10-18 11:07:19,670 | INFO     | ready for new job
[2025-10-18 07:08:27] 2025-10-18 11:07:19,671 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 07:08:27] 2025-10-18 11:07:19,673 | INFO     | ***************************************
[2025-10-18 07:08:27] 2025-10-18 11:07:19,673 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 07:08:27] 2025-10-18 11:07:19,673 | INFO     | ***************************************
[2025-10-18 07:08:27] 2025-10-18 11:07:19,673 | INFO     | 
[2025-10-18 07:08:27] 2025-10-18 11:07:19,674 | INFO     | architecture information:
[2025-10-18 07:08:27] 2025-10-18 11:07:19,674 | INFO     | executing command: cat /etc/os-release
[2025-10-18 07:08:27] 2025-10-18 11:07:19,694 | INFO     | cat /etc/os-release:
[2025-10-18 07:08:27] NAME="CentOS Linux"
[2025-10-18 07:08:27] VERSION="7 (Core)"
[2025-10-18 07:08:27] ID="centos"
[2025-10-18 07:08:27] ID_LIKE="rhel fedora"
[2025-10-18 07:08:27] VERSION_ID="7"
[2025-10-18 07:08:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 07:08:27] ANSI_COLOR="0;31"
[2025-10-18 07:08:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 07:08:27] HOME_URL="https://www.centos.org/"
[2025-10-18 07:08:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 07:08:27] 
[2025-10-18 07:08:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 07:08:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 07:08:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 07:08:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 07:08:27] 
[2025-10-18 07:08:27] 2025-10-18 11:07:19,694 | INFO     | ***************************************
[2025-10-18 07:08:27] 2025-10-18 11:07:20,197 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 07:08:27] 2025-10-18 11:07:20,216 | INFO     | sufficient remaining disk space (18532532224 B)
[2025-10-18 07:08:27] 2025-10-18 11:07:20,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 07:08:27] 2025-10-18 11:07:20,217 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 07:08:27] 2025-10-18 11:07:20,217 | INFO     | update_server=False
[2025-10-18 07:08:27] 2025-10-18 11:07:20,218 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 07:08:27] 2025-10-18 11:07:20,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 07:08:27] 2025-10-18 11:07:20,286 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 07:08:27] 2025-10-18 11:07:20,435 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-18 07:08:27] 2025-10-18 11:07:20,436 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-18 07:08:27] 2025-10-18 11:07:20,446 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 07:08:27] 2025-10-18 11:07:20,446 | INFO     | will abort loop
[2025-10-18 07:08:27] 2025-10-18 11:07:20,742 | INFO     | all payload control threads have been joined
[2025-10-18 07:08:27] 2025-10-18 11:07:20,841 | INFO     | all data control threads have been joined
[2025-10-18 07:08:27] 2025-10-18 11:07:21,024 | INFO     | all job control threads have been joined
[2025-10-18 07:08:27] 2025-10-18 11:07:21,224 | INFO     | [job] retrieve thread has finished
[2025-10-18 07:08:27] 2025-10-18 11:07:21,224 | INFO     | [job] queue monitor thread has finished
[2025-10-18 07:08:27] 2025-10-18 11:07:21,452 | INFO     | [job] job monitor thread has finished
[2025-10-18 07:08:27] 2025-10-18 11:07:21,747 | INFO     | [payload] control thread has finished
[2025-10-18 07:08:27] 2025-10-18 11:07:21,847 | INFO     | [data] control thread has finished
[2025-10-18 07:08:27] 2025-10-18 11:07:22,029 | INFO     | [job] control thread has finished
[2025-10-18 07:08:27] 2025-10-18 11:07:22,193 | INFO     | [payload] failed_post thread has finished
[2025-10-18 07:08:27] 2025-10-18 11:07:22,290 | INFO     | [data] copytool_out thread has finished
[2025-10-18 07:08:27] 2025-10-18 11:07:22,296 | INFO     | [job] validate thread has finished
[2025-10-18 07:08:27] 2025-10-18 11:07:22,669 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 07:08:27] 2025-10-18 11:07:22,677 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 07:08:27] 2025-10-18 11:07:22,687 | INFO     | [data] copytool_in thread has finished
[2025-10-18 07:08:27] 2025-10-18 11:07:22,724 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 07:08:27] 2025-10-18 11:07:22,792 | INFO     | [payload] validate_post thread has finished
[2025-10-18 07:08:27] 2025-10-18 11:07:22,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 07:08:27] 2025-10-18 11:07:26,921 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 07:08:27] 2025-10-18 11:07:30,471 | INFO     | job.realtimelogging is not enabled
[2025-10-18 07:08:27] 2025-10-18 11:07:31,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 07:08:27] 2025-10-18 11:07:51,023 | INFO     | PID=6240 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-18 07:08:27] 2025-10-18 11:07:51,024 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 07:08:27] 2025-10-18 11:07:51,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 07:08:27] 2025-10-18 11:07:51,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 07:08:27] 2025-10-18 11:08:20,123 | INFO     | [monitor] cgroup control has ended
[2025-10-18 07:08:27] 2025-10-18 11:08:21,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140607539091264)>', '<ExcThread(monitor, started 140607311750912)>']
[2025-10-18 07:08:27] 2025-10-18 11:08:22,179 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 07:08:27] 2025-10-18 11:08:22,179 | INFO     | [monitor] control thread has ended
[2025-10-18 07:08:27] 2025-10-18 11:08:26,789 | INFO     | all workflow threads have been joined
[2025-10-18 07:08:27] 2025-10-18 11:08:26,790 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 07:08:27] 2025-10-18 11:08:26,795 | INFO     | traces error code: 0
[2025-10-18 07:08:27] 2025-10-18 11:08:26,795 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 07:08:27] 2025-10-18 11:08:26,905 [wrapper] ==== pilot stdout END ====
[2025-10-18 07:08:27] 2025-10-18 11:08:26,910 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 07:08:27] 2025-10-18 11:08:26,915 [wrapper] pilotpid: 6240
[2025-10-18 07:08:27] 2025-10-18 11:08:26,921 [wrapper] Pilot exit status: 0
[2025-10-18 07:08:27] 2025-10-18 11:08:26,939 [wrapper] pandaids: 6848020312
[2025-10-18 07:08:27] 2025-10-18 11:08:26,991 [wrapper] cleanup supervisor_pilot 14178 6241
[2025-10-18 07:08:27] 2025-10-18 11:08:26,996 [wrapper] Test setup, not cleaning
[2025-10-18 07:08:27] 2025-10-18 11:08:27,002 [wrapper] apfmon messages muted
[2025-10-18 07:08:27] 2025-10-18 11:08:27,007 [wrapper] ==== wrapper stdout END ====
[2025-10-18 07:08:27] 2025-10-18 11:08:27,011 [wrapper] ==== wrapper stderr END ====
[2025-10-18 07:08:27]  *** Error codes and diagnostics ***
[2025-10-18 07:08:27]     "exeErrorCode": 0,
[2025-10-18 07:08:27]     "exeErrorDiag": "",
[2025-10-18 07:08:27]     "pilotErrorCode": 0,
[2025-10-18 07:08:27]     "pilotErrorDiag": "",
[2025-10-18 07:08:27]  *** Listing of results directory ***
[2025-10-18 07:08:27] total 427184
[2025-10-18 07:08:27] -rw-r--r-- 1 boincer umatlas    557409 Oct 17 23:33 pilot3.tar.gz
[2025-10-18 07:08:27] -rwx------ 1 boincer umatlas     36292 Oct 17 23:58 runpilot2-wrapper.sh
[2025-10-18 07:08:27] -rw-r--r-- 1 boincer umatlas      5112 Oct 17 23:58 queuedata.json
[2025-10-18 07:08:27] -rw-r--r-- 1 boincer umatlas       100 Oct 18 04:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 07:08:27] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 04:55 run_atlas
[2025-10-18 07:08:27] -rw-r--r-- 1 boincer umatlas       105 Oct 18 04:55 job.xml
[2025-10-18 07:08:27] -rw-r--r-- 2 boincer umatlas 226400996 Oct 18 04:55 EVNT.46771634._001595.pool.root.1
[2025-10-18 07:08:27] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 04:55 start_atlas.sh
[2025-10-18 07:08:27] drwxrwx--x 2 boincer umatlas      4096 Oct 18 04:55 shared
[2025-10-18 07:08:27] -rw-r--r-- 2 boincer umatlas    569678 Oct 18 04:55 input.tar.gz
[2025-10-18 07:08:27] -rw-r--r-- 1 boincer umatlas         0 Oct 18 04:55 boinc_lockfile
[2025-10-18 07:08:27] -rw-r--r-- 1 boincer umatlas      2558 Oct 18 04:55 pandaJob.out
[2025-10-18 07:08:27] -rw------- 1 boincer umatlas    976749 Oct 18 04:56 agis_schedconf.cvmfs.json
[2025-10-18 07:08:27] -rw------- 1 boincer umatlas   1560740 Oct 18 04:56 agis_ddmendpoints.agis.ALL.json
[2025-10-18 07:08:27] drwx------ 5 boincer umatlas      4096 Oct 18 04:56 pilot3
[2025-10-18 07:08:27] -rw-r--r-- 1 boincer umatlas      5910 Oct 18 07:00 init_data.xml
[2025-10-18 07:08:27] -rw------- 1 boincer umatlas 204164854 Oct 18 07:06 HITS.46771637._036681.pool.root.1
[2025-10-18 07:08:27] -rw-r--r-- 1 boincer umatlas       529 Oct 18 07:07 boinc_task_state.xml
[2025-10-18 07:08:27] -rw------- 1 boincer umatlas        95 Oct 18 07:07 pilot_heartbeat.json
[2025-10-18 07:08:27] -rw------- 1 boincer umatlas      1050 Oct 18 07:07 memory_monitor_summary.json
[2025-10-18 07:08:27] -rw------- 1 boincer umatlas    380671 Oct 18 07:07 log.46771637._036681.job.log.tgz.1
[2025-10-18 07:08:27] -rw------- 1 boincer umatlas      7842 Oct 18 07:07 heartbeat.json
[2025-10-18 07:08:27] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 07:08 boinc_mmap_file
[2025-10-18 07:08:27] -rw-r--r-- 1 boincer umatlas        27 Oct 18 07:08 wrapper_checkpoint.txt
[2025-10-18 07:08:27] -rw------- 1 boincer umatlas      5003 Oct 18 07:08 pilotlog.txt
[2025-10-18 07:08:27] -rw------- 1 boincer umatlas   1103461 Oct 18 07:08 log.46771637._036681.job.log.1
[2025-10-18 07:08:27] -rw------- 1 boincer umatlas       357 Oct 18 07:08 output.list
[2025-10-18 07:08:27] -rw-r--r-- 1 boincer umatlas       620 Oct 18 07:08 runtime_log
[2025-10-18 07:08:27] -rw------- 1 boincer umatlas   1505280 Oct 18 07:08 result.tar.gz
[2025-10-18 07:08:27] -rw-r--r-- 1 boincer umatlas      8703 Oct 18 07:08 runtime_log.err
[2025-10-18 07:08:27] -rw------- 1 boincer umatlas       660 Oct 18 07:08 Q5NNDmCGDU8n9Rq4apOajLDm4fhM0noT9bVof3QYDmcRbMDmL7ZLWn.diag
[2025-10-18 07:08:27] -rw-r--r-- 1 boincer umatlas     20871 Oct 18 07:08 stderr.txt
[2025-10-18 07:08:27] HITS file was successfully produced:
[2025-10-18 07:08:27] -rw------- 1 boincer umatlas 204164854 Oct 18 07:06 shared/HITS.pool.root.1
[2025-10-18 07:08:27]  *** Contents of shared directory: ***
[2025-10-18 07:08:27] total 422528
[2025-10-18 07:08:27] -rw-r--r-- 2 boincer umatlas 226400996 Oct 18 04:55 ATLAS.root_0
[2025-10-18 07:08:27] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 04:55 start_atlas.sh
[2025-10-18 07:08:27] -rw-r--r-- 2 boincer umatlas    569678 Oct 18 04:55 input.tar.gz
[2025-10-18 07:08:27] -rw------- 1 boincer umatlas 204164854 Oct 18 07:06 HITS.pool.root.1
[2025-10-18 07:08:27] -rw------- 1 boincer umatlas   1505280 Oct 18 07:08 result.tar.gz
07:08:28 (2423): run_atlas exited; CPU time 59213.496866
07:08:28 (2423): called boinc_finish(0)

</stderr_txt>
]]>

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