Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:20:11 (17209): wrapper (7.7.26015): starting
04:20:11 (17209): wrapper: running run_atlas (--nthreads 12)
[2025-10-18 04:20:11] Arguments: --nthreads 12
[2025-10-18 04:20:11] Threads: 12
[2025-10-18 04:20:11] Checking for CVMFS
[2025-10-18 04:20:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 04:20:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 04:20:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 04:20:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 04:20:12] 2.11.2.0 2991 231227 97916 151844 2 57 18367644 20275201 1 130560 1 114730912 99.984 13749811 12670 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 04:20:12] CVMFS is ok
[2025-10-18 04:20:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 04:20:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 04:20:12] Further information can be found at the LHC@home message board.
[2025-10-18 04:20:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 04:20:12] Checking for apptainer binary...
[2025-10-18 04:20:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 04:20:12] Running /usr/bin/apptainer --version
[2025-10-18 04:20:12] apptainer version 1.3.2-1.el7
[2025-10-18 04:20:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 04:20:13] c-205-32.aglt2.org
[2025-10-18 04:20:13] apptainer works
[2025-10-18 04:20:13] Set ATHENA_PROC_NUMBER=12
[2025-10-18 04:20:13] Set ATHENA_CORE_NUMBER=12
[2025-10-18 04:20:13] Starting ATLAS job with PandaID=6848017471
[2025-10-18 04:20:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 05:41:41]  *** The last 200 lines of the pilot log: ***
[2025-10-18 05:41:41]  status_code=0
[2025-10-18 05:41:41]  storage_token=
[2025-10-18 05:41:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6848017471/log.46771637._034646.job.log.tgz.1
[2025-10-18 05:41:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/2e/log.46771637._034646.job.log.tgz.1
[2025-10-18 05:41:41]  workdir=None
[2025-10-18 05:41:41] ]
[2025-10-18 05:41:41] 2025-10-18 09:40:40,372 | INFO     | transferring file log.46771637._034646.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6848017471/log.46771637._034646.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-18 05:41:41] 2025-10-18 09:40:40,372 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6848017471/log.46771637._034646.job.log.tgz.1 /tmp/boinchome/slots/0/log.46771637._034646.job
[2025-10-18 05:41:41] 2025-10-18 09:40:40,394 | INFO     | adding to output.list: log.46771637._034646.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/2e/log.46771637._034646.job.log.tg
[2025-10-18 05:41:41] 2025-10-18 09:40:40,395 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 05:41:41] 2025-10-18 09:40:40,395 | INFO     | summary of transferred files:
[2025-10-18 05:41:41] 2025-10-18 09:40:40,395 | INFO     |  -- lfn=log.46771637._034646.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 05:41:41] 2025-10-18 09:40:40,396 | INFO     | stage-out finished correctly
[2025-10-18 05:41:41] 2025-10-18 09:40:40,590 | INFO     | time since job start (4812s) is within the limit (172800.0s)
[2025-10-18 05:41:41] 2025-10-18 09:40:42,350 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 05:41:41] 2025-10-18 09:40:42,543 | INFO     | monitor loop #360: job 0:6848017471 is in state 'finished'
[2025-10-18 05:41:41] 2025-10-18 09:40:42,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 05:41:41] 2025-10-18 09:40:42,591 | INFO     | time since job start (4814s) is within the limit (172800.0s)
[2025-10-18 05:41:41] 2025-10-18 09:40:43,588 | INFO     | job 6848017471 has state=finished
[2025-10-18 05:41:41] 2025-10-18 09:40:43,588 | INFO     | preparing for final server update for job 6848017471 in state='finished'
[2025-10-18 05:41:41] 2025-10-18 09:40:43,589 | INFO     | this job has now completed (state=finished)
[2025-10-18 05:41:41] 2025-10-18 09:40:43,589 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 05:41:41] 2025-10-18 09:40:43,589 | INFO     | log transfer has been attempted: DONE
[2025-10-18 05:41:41] 2025-10-18 09:40:43,590 | INFO     | job 6848017471 has finished - writing final server update
[2025-10-18 05:41:41] 2025-10-18 09:40:43,590 | INFO     | total number of processed events: 400 (read)
[2025-10-18 05:41:41] 2025-10-18 09:40:43,592 | INFO     | executing command: lscpu
[2025-10-18 05:41:41] 2025-10-18 09:40:43,619 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 05:41:41] 2025-10-18 09:40:44,597 | INFO     | time since job start (4816s) is within the limit (172800.0s)
[2025-10-18 05:41:41] 2025-10-18 09:40:45,047 | INFO     | monitor loop #361: job 0:6848017471 is in state 'finished'
[2025-10-18 05:41:41] 2025-10-18 09:40:45,047 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 05:41:41] 2025-10-18 09:40:45,716 | INFO     | PID=20972 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 05:41:41] 2025-10-18 09:40:46,716 | INFO     | time since job start (4818s) is within the limit (172800.0s)
[2025-10-18 05:41:41] 2025-10-18 09:40:47,550 | INFO     | monitor loop #362: job 0:6848017471 is in state 'finished'
[2025-10-18 05:41:41] 2025-10-18 09:40:47,551 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 05:41:41] 2025-10-18 09:40:48,130 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-18 05:41:41] 2025-10-18 09:40:48,134 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1806.6666666666667
[2025-10-18 05:41:41] 2025-10-18 09:40:48,136 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6848017471/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 05:41:41] 2025-10-18 09:40:48,137 | INFO     | extracted standard info from prmon json
[2025-10-18 05:41:41] 2025-10-18 09:40:48,137 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 05:41:41] 2025-10-18 09:40:48,138 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 05:41:41] 2025-10-18 09:40:48,138 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 05:41:41] 2025-10-18 09:40:48,138 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 05:41:41] 2025-10-18 09:40:48,140 | INFO     | fitting pss+swap vs Time
[2025-10-18 05:41:41] 2025-10-18 09:40:48,140 | INFO     | sum of square deviations: 115715658.0
[2025-10-18 05:41:41] 2025-10-18 09:40:48,140 | INFO     | sum of deviations: -7095412152.0
[2025-10-18 05:41:41] 2025-10-18 09:40:48,140 | INFO     | mean x: 1760778127.5
[2025-10-18 05:41:41] 2025-10-18 09:40:48,140 | INFO     | mean y: 2864470.5555555555
[2025-10-18 05:41:41] 2025-10-18 09:40:48,141 | INFO     | -- intersect: 107969640434.78423
[2025-10-18 05:41:41] 2025-10-18 09:40:48,141 | INFO     | intersect: 107969640434.78423
[2025-10-18 05:41:41] 2025-10-18 09:40:48,141 | INFO     | chi2: 0.10961512441568592
[2025-10-18 05:41:41] 2025-10-18 09:40:48,141 | INFO     | -- intersect: 107969640434.78423
[2025-10-18 05:41:41] 2025-10-18 09:40:48,141 | INFO     | current memory leak: -61.32 B/s (using 72 data points, chi2=0.11)
[2025-10-18 05:41:41] 2025-10-18 09:40:48,141 | INFO     | could have reported an average CPU frequency of 2063 MHz (6 samples)
[2025-10-18 05:41:41] 2025-10-18 09:40:48,142 | INFO     | ..............................
[2025-10-18 05:41:41] 2025-10-18 09:40:48,142 | INFO     | . Timing measurements:
[2025-10-18 05:41:41] 2025-10-18 09:40:48,142 | INFO     | . get job = 0 s
[2025-10-18 05:41:41] 2025-10-18 09:40:48,142 | INFO     | . initial setup = 2 s
[2025-10-18 05:41:41] 2025-10-18 09:40:48,142 | INFO     | . payload setup = 7 s
[2025-10-18 05:41:41] 2025-10-18 09:40:48,142 | INFO     | . stage-in = 0 s
[2025-10-18 05:41:41] 2025-10-18 09:40:48,142 | INFO     | . payload execution = 4784 s
[2025-10-18 05:41:41] 2025-10-18 09:40:48,142 | INFO     | . stage-out = 0 s
[2025-10-18 05:41:41] 2025-10-18 09:40:48,142 | INFO     | . log creation = 0 s
[2025-10-18 05:41:41] 2025-10-18 09:40:48,142 | INFO     | ..............................
[2025-10-18 05:41:41] 2025-10-18 09:40:48,225 | INFO     | 
[2025-10-18 05:41:41] 2025-10-18 09:40:48,225 | INFO     | job summary report
[2025-10-18 05:41:41] 2025-10-18 09:40:48,225 | INFO     | --------------------------------------------------
[2025-10-18 05:41:41] 2025-10-18 09:40:48,226 | INFO     | PanDA job id: 6848017471
[2025-10-18 05:41:41] 2025-10-18 09:40:48,226 | INFO     | task id: 46771637
[2025-10-18 05:41:41] 2025-10-18 09:40:48,226 | INFO     | errors: (none)
[2025-10-18 05:41:41] 2025-10-18 09:40:48,226 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 05:41:41] 2025-10-18 09:40:48,226 | INFO     | pilot state: finished 
[2025-10-18 05:41:41] 2025-10-18 09:40:48,226 | INFO     | transexitcode: 0
[2025-10-18 05:41:41] 2025-10-18 09:40:48,227 | INFO     | exeerrorcode: 0
[2025-10-18 05:41:41] 2025-10-18 09:40:48,227 | INFO     | exeerrordiag: 
[2025-10-18 05:41:41] 2025-10-18 09:40:48,227 | INFO     | exitcode: 0
[2025-10-18 05:41:41] 2025-10-18 09:40:48,227 | INFO     | exitmsg: OK
[2025-10-18 05:41:41] 2025-10-18 09:40:48,227 | INFO     | cpuconsumptiontime: 51341 s
[2025-10-18 05:41:41] 2025-10-18 09:40:48,227 | INFO     | nevents: 400
[2025-10-18 05:41:41] 2025-10-18 09:40:48,227 | INFO     | neventsw: 0
[2025-10-18 05:41:41] 2025-10-18 09:40:48,227 | INFO     | pid: 27385
[2025-10-18 05:41:41] 2025-10-18 09:40:48,228 | INFO     | pgrp: 27385
[2025-10-18 05:41:41] 2025-10-18 09:40:48,228 | INFO     | corecount: 12
[2025-10-18 05:41:41] 2025-10-18 09:40:48,228 | INFO     | event service: False
[2025-10-18 05:41:41] 2025-10-18 09:40:48,228 | INFO     | sizes: {0: 2348929, 5: 2349191, 11: 2349247, 4795: 2375440, 4797: 2384438, 4799: 2384494, 4804: 2384816}
[2025-10-18 05:41:41] 2025-10-18 09:40:48,228 | INFO     | --------------------------------------------------
[2025-10-18 05:41:41] 2025-10-18 09:40:48,228 | INFO     | 
[2025-10-18 05:41:41] 2025-10-18 09:40:48,228 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 05:41:41] 2025-10-18 09:40:48,251 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,252 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,252 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,254 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,254 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,254 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,254 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,254 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,254 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,255 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 05:41:41] 2025-10-18 09:40:48,255 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,255 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 05:41:41] 2025-10-18 09:40:48,255 | INFO     | job 6848017471 has completed (purged errors)
[2025-10-18 05:41:41] 2025-10-18 09:40:48,255 | INFO     | overall cleanup function is called
[2025-10-18 05:41:41] 2025-10-18 09:40:49,264 | INFO     | --- collectZombieJob: --- 10, [27385]
[2025-10-18 05:41:41] 2025-10-18 09:40:49,264 | INFO     | zombie collector waiting for pid 27385
[2025-10-18 05:41:41] 2025-10-18 09:40:49,264 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 05:41:41] 2025-10-18 09:40:49,264 | INFO     | collected zombie processes
[2025-10-18 05:41:41] 2025-10-18 09:40:49,264 | INFO     | will attempt to kill all subprocesses of pid=27385
[2025-10-18 05:41:41] 2025-10-18 09:40:49,354 | INFO     | process IDs to be killed: [27385] (in reverse order)
[2025-10-18 05:41:41] 2025-10-18 09:40:49,487 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 05:41:41] 2025-10-18 09:40:49,487 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 05:41:41] 2025-10-18 09:40:49,490 | INFO     | did not find any defunct processes belonging to 27385
[2025-10-18 05:41:41] 2025-10-18 09:40:49,492 | INFO     | did not find any defunct processes belonging to 27385
[2025-10-18 05:41:41] 2025-10-18 09:40:49,492 | INFO     | ready for new job
[2025-10-18 05:41:41] 2025-10-18 09:40:49,493 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 05:41:41] 2025-10-18 09:40:49,494 | INFO     | ***************************************
[2025-10-18 05:41:41] 2025-10-18 09:40:49,494 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 05:41:41] 2025-10-18 09:40:49,494 | INFO     | ***************************************
[2025-10-18 05:41:41] 2025-10-18 09:40:49,494 | INFO     | 
[2025-10-18 05:41:41] 2025-10-18 09:40:49,495 | INFO     | architecture information:
[2025-10-18 05:41:41] 2025-10-18 09:40:49,495 | INFO     | executing command: cat /etc/os-release
[2025-10-18 05:41:41] 2025-10-18 09:40:49,511 | INFO     | cat /etc/os-release:
[2025-10-18 05:41:41] NAME="CentOS Linux"
[2025-10-18 05:41:41] VERSION="7 (Core)"
[2025-10-18 05:41:41] ID="centos"
[2025-10-18 05:41:41] ID_LIKE="rhel fedora"
[2025-10-18 05:41:41] VERSION_ID="7"
[2025-10-18 05:41:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 05:41:41] ANSI_COLOR="0;31"
[2025-10-18 05:41:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 05:41:41] HOME_URL="https://www.centos.org/"
[2025-10-18 05:41:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 05:41:41] 
[2025-10-18 05:41:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 05:41:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 05:41:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 05:41:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 05:41:41] 
[2025-10-18 05:41:41] 2025-10-18 09:40:49,512 | INFO     | ***************************************
[2025-10-18 05:41:41] 2025-10-18 09:40:50,015 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 05:41:41] 2025-10-18 09:40:50,032 | INFO     | sufficient remaining disk space (29336010752 B)
[2025-10-18 05:41:41] 2025-10-18 09:40:50,033 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 05:41:41] 2025-10-18 09:40:50,033 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 05:41:41] 2025-10-18 09:40:50,033 | INFO     | update_server=False
[2025-10-18 05:41:41] 2025-10-18 09:40:50,033 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 05:41:41] 2025-10-18 09:40:50,033 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 05:41:41] 2025-10-18 09:40:50,054 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-18 05:41:41] 2025-10-18 09:40:50,054 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-18 05:41:41] 2025-10-18 09:40:50,054 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 05:41:41] 2025-10-18 09:40:50,054 | INFO     | will abort loop
[2025-10-18 05:41:41] 2025-10-18 09:40:50,993 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 05:41:41] 2025-10-18 09:40:51,039 | INFO     | [job] retrieve thread has finished
[2025-10-18 05:41:41] 2025-10-18 09:40:51,039 | INFO     | [job] queue monitor thread has finished
[2025-10-18 05:41:41] 2025-10-18 09:40:51,055 | INFO     | [job] job monitor thread has finished
[2025-10-18 05:41:41] 2025-10-18 09:40:51,077 | INFO     | all payload control threads have been joined
[2025-10-18 05:41:41] 2025-10-18 09:40:51,125 | INFO     | all data control threads have been joined
[2025-10-18 05:41:41] 2025-10-18 09:40:51,204 | INFO     | [payload] validate_post thread has finished
[2025-10-18 05:41:41] 2025-10-18 09:40:51,672 | INFO     | all job control threads have been joined
[2025-10-18 05:41:41] 2025-10-18 09:40:51,795 | INFO     | [job] validate thread has finished
[2025-10-18 05:41:41] 2025-10-18 09:40:51,827 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 05:41:41] 2025-10-18 09:40:52,082 | INFO     | [payload] control thread has finished
[2025-10-18 05:41:41] 2025-10-18 09:40:52,083 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 05:41:41] 2025-10-18 09:40:52,090 | INFO     | [data] copytool_in thread has finished
[2025-10-18 05:41:41] 2025-10-18 09:40:52,097 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 05:41:41] 2025-10-18 09:40:52,129 | INFO     | [data] control thread has finished
[2025-10-18 05:41:41] 2025-10-18 09:40:52,249 | INFO     | [payload] failed_post thread has finished
[2025-10-18 05:41:41] 2025-10-18 09:40:52,674 | INFO     | [job] control thread has finished
[2025-10-18 05:41:41] 2025-10-18 09:40:52,938 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 05:41:41] 2025-10-18 09:40:52,999 | INFO     | [data] copytool_out thread has finished
[2025-10-18 05:41:41] 2025-10-18 09:40:56,944 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 05:41:41] 2025-10-18 09:41:00,850 | INFO     | job.realtimelogging is not enabled
[2025-10-18 05:41:41] 2025-10-18 09:41:01,853 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 05:41:41] 2025-10-18 09:41:19,918 | INFO     | PID=20972 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 05:41:41] 2025-10-18 09:41:19,919 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 05:41:41] 2025-10-18 09:41:19,919 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 05:41:41] 2025-10-18 09:41:19,919 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 05:41:41] 2025-10-18 09:41:35,496 | INFO     | [monitor] cgroup control has ended
[2025-10-18 05:41:41] 2025-10-18 09:41:36,405 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140684363630400)>', '<ExcThread(monitor, started 140683784476416)>']
[2025-10-18 05:41:41] 2025-10-18 09:41:36,997 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 05:41:41] 2025-10-18 09:41:36,997 | INFO     | [monitor] control thread has ended
[2025-10-18 05:41:41] 2025-10-18 09:41:41,430 | INFO     | all workflow threads have been joined
[2025-10-18 05:41:41] 2025-10-18 09:41:41,430 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 05:41:41] 2025-10-18 09:41:41,431 | INFO     | traces error code: 0
[2025-10-18 05:41:41] 2025-10-18 09:41:41,431 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 05:41:41] 2025-10-18 09:41:41,510 [wrapper] ==== pilot stdout END ====
[2025-10-18 05:41:41] 2025-10-18 09:41:41,513 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 05:41:41] 2025-10-18 09:41:41,517 [wrapper] pilotpid: 20972
[2025-10-18 05:41:41] 2025-10-18 09:41:41,521 [wrapper] Pilot exit status: 0
[2025-10-18 05:41:41] 2025-10-18 09:41:41,537 [wrapper] pandaids: 6848017471
[2025-10-18 05:41:41] 2025-10-18 09:41:41,579 [wrapper] cleanup supervisor_pilot 15716 20973
[2025-10-18 05:41:41] 2025-10-18 09:41:41,583 [wrapper] Test setup, not cleaning
[2025-10-18 05:41:41] 2025-10-18 09:41:41,587 [wrapper] apfmon messages muted
[2025-10-18 05:41:41] 2025-10-18 09:41:41,591 [wrapper] ==== wrapper stdout END ====
[2025-10-18 05:41:41] 2025-10-18 09:41:41,594 [wrapper] ==== wrapper stderr END ====
[2025-10-18 05:41:41]  *** Error codes and diagnostics ***
[2025-10-18 05:41:41]     "exeErrorCode": 0,
[2025-10-18 05:41:41]     "exeErrorDiag": "",
[2025-10-18 05:41:41]     "pilotErrorCode": 0,
[2025-10-18 05:41:41]     "pilotErrorDiag": "",
[2025-10-18 05:41:41]  *** Listing of results directory ***
[2025-10-18 05:41:41] total 430036
[2025-10-18 05:41:41] -rw-r--r-- 1 boincer umatlas    557409 Oct 17 20:19 pilot3.tar.gz
[2025-10-18 05:41:41] -rwx------ 1 boincer umatlas     36292 Oct 17 20:23 runpilot2-wrapper.sh
[2025-10-18 05:41:41] -rw-r--r-- 1 boincer umatlas      5112 Oct 17 20:23 queuedata.json
[2025-10-18 05:41:41] -rw-r--r-- 1 boincer umatlas       100 Oct 18 04:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 05:41:41] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 04:20 run_atlas
[2025-10-18 05:41:41] -rw-r--r-- 1 boincer umatlas       105 Oct 18 04:20 job.xml
[2025-10-18 05:41:41] -rw-r--r-- 2 boincer umatlas 228513755 Oct 18 04:20 EVNT.46771634._001534.pool.root.1
[2025-10-18 05:41:41] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 04:20 start_atlas.sh
[2025-10-18 05:41:41] drwxrwx--x 2 boincer umatlas      4096 Oct 18 04:20 shared
[2025-10-18 05:41:41] -rw-r--r-- 2 boincer umatlas    569671 Oct 18 04:20 input.tar.gz
[2025-10-18 05:41:41] -rw-r--r-- 1 boincer umatlas         0 Oct 18 04:20 boinc_lockfile
[2025-10-18 05:41:41] -rw-r--r-- 1 boincer umatlas      2558 Oct 18 04:20 pandaJob.out
[2025-10-18 05:41:41] -rw------- 1 boincer umatlas    976749 Oct 18 04:20 agis_schedconf.cvmfs.json
[2025-10-18 05:41:41] -rw------- 1 boincer umatlas   1560740 Oct 18 04:20 agis_ddmendpoints.agis.ALL.json
[2025-10-18 05:41:41] drwx------ 5 boincer umatlas      4096 Oct 18 04:20 pilot3
[2025-10-18 05:41:41] -rw-r--r-- 1 boincer umatlas      5953 Oct 18 05:39 init_data.xml
[2025-10-18 05:41:41] -rw------- 1 boincer umatlas 205771594 Oct 18 05:40 HITS.46771637._034646.pool.root.1
[2025-10-18 05:41:41] -rw-r--r-- 1 boincer umatlas       529 Oct 18 05:40 boinc_task_state.xml
[2025-10-18 05:41:41] -rw------- 1 boincer umatlas        95 Oct 18 05:40 pilot_heartbeat.json
[2025-10-18 05:41:41] -rw------- 1 boincer umatlas      1050 Oct 18 05:40 memory_monitor_summary.json
[2025-10-18 05:41:41] -rw------- 1 boincer umatlas    386197 Oct 18 05:40 log.46771637._034646.job.log.tgz.1
[2025-10-18 05:41:41] -rw------- 1 boincer umatlas      7857 Oct 18 05:40 heartbeat.json
[2025-10-18 05:41:41] -rw-r--r-- 1 boincer umatlas        27 Oct 18 05:41 wrapper_checkpoint.txt
[2025-10-18 05:41:41] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 05:41 boinc_mmap_file
[2025-10-18 05:41:41] -rw------- 1 boincer umatlas      5004 Oct 18 05:41 pilotlog.txt
[2025-10-18 05:41:41] -rw------- 1 boincer umatlas    696275 Oct 18 05:41 log.46771637._034646.job.log.1
[2025-10-18 05:41:41] -rw------- 1 boincer umatlas       357 Oct 18 05:41 output.list
[2025-10-18 05:41:41] -rw-r--r-- 1 boincer umatlas       620 Oct 18 05:41 runtime_log
[2025-10-18 05:41:41] -rw------- 1 boincer umatlas   1105920 Oct 18 05:41 result.tar.gz
[2025-10-18 05:41:41] -rw-r--r-- 1 boincer umatlas      8705 Oct 18 05:41 runtime_log.err
[2025-10-18 05:41:41] -rw------- 1 boincer umatlas       659 Oct 18 05:41 fWMMDm7t9T8n9Rq4apOajLDm4fhM0noT9bVof3QYDm97aMDmiYnron.diag
[2025-10-18 05:41:41] -rw-r--r-- 1 boincer umatlas     22157 Oct 18 05:41 stderr.txt
[2025-10-18 05:41:41] HITS file was successfully produced:
[2025-10-18 05:41:41] -rw------- 1 boincer umatlas 205771594 Oct 18 05:40 shared/HITS.pool.root.1
[2025-10-18 05:41:41]  *** Contents of shared directory: ***
[2025-10-18 05:41:41] total 425772
[2025-10-18 05:41:41] -rw-r--r-- 2 boincer umatlas 228513755 Oct 18 04:20 ATLAS.root_0
[2025-10-18 05:41:41] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 04:20 start_atlas.sh
[2025-10-18 05:41:41] -rw-r--r-- 2 boincer umatlas    569671 Oct 18 04:20 input.tar.gz
[2025-10-18 05:41:41] -rw------- 1 boincer umatlas 205771594 Oct 18 05:40 HITS.pool.root.1
[2025-10-18 05:41:41] -rw------- 1 boincer umatlas   1105920 Oct 18 05:41 result.tar.gz
05:41:43 (17209): run_atlas exited; CPU time 51315.901578
05:41:43 (17209): called boinc_finish(0)

</stderr_txt>
]]>

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