Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:14:24 (1003563): wrapper (7.7.26015): starting
17:14:24 (1003563): wrapper: running run_atlas (--nthreads 12)
[2025-10-18 17:14:24] Arguments: --nthreads 12
[2025-10-18 17:14:24] Threads: 12
[2025-10-18 17:14:24] Checking for CVMFS
[2025-10-18 17:14:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 17:14:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 17:14:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 17:14:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 17:14:24] 2.13.1.0 713185 687 64896 151857 2 56 3840882 4097024 0 130560 0 798646 99.992 29242 7536 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-18 17:14:24] CVMFS is ok
[2025-10-18 17:14:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 17:14:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 17:14:24] Further information can be found at the LHC@home message board.
[2025-10-18 17:14:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 17:14:24] Checking for apptainer binary...
[2025-10-18 17:14:24] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-18 17:14:24] apptainer is not installed, using version from CVMFS
[2025-10-18 17:14:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 17:14:24] pckelar5.cern.ch
[2025-10-18 17:14:24] apptainer works
[2025-10-18 17:14:24] Set ATHENA_PROC_NUMBER=12
[2025-10-18 17:14:24] Set ATHENA_CORE_NUMBER=12
[2025-10-18 17:14:24] Starting ATLAS job with PandaID=6848014949
[2025-10-18 17:14:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 18:28:44]  *** The last 200 lines of the pilot log: ***
[2025-10-18 18:28:44]  mtime=0
[2025-10-18 18:28:44]  protocol_id=None
[2025-10-18 18:28:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-18 18:28:44]  replicas=None
[2025-10-18 18:28:44]  scope=mc23_13p6TeV
[2025-10-18 18:28:44]  status=None
[2025-10-18 18:28:44]  status_code=0
[2025-10-18 18:28:44]  storage_token=
[2025-10-18 18:28:44]  surl=/var/lib/boinc/slots/4/PanDA_Pilot-6848014949/log.46771637._033203.job.log.tgz.1
[2025-10-18 18:28:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/8e/log.46771637._033203.job.log.tgz.1
[2025-10-18 18:28:44]  workdir=None
[2025-10-18 18:28:44] ]
[2025-10-18 18:28:44] 2025-10-18 16:27:36,341 | INFO     | transferring file log.46771637._033203.job.log.tgz.1 from /var/lib/boinc/slots/4/PanDA_Pilot-6848014949/log.46771637._033203.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-18 18:28:44] 2025-10-18 16:27:36,341 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/4/PanDA_Pilot-6848014949/log.46771637._033203.job.log.tgz.1 /var/lib/boinc/slots/4/log.46771637._033203.job
[2025-10-18 18:28:44] 2025-10-18 16:27:36,356 | INFO     | adding to output.list: log.46771637._033203.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/8e/log.46771637._033203.job.log.tg
[2025-10-18 18:28:44] 2025-10-18 16:27:36,357 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 18:28:44] 2025-10-18 16:27:36,357 | INFO     | summary of transferred files:
[2025-10-18 18:28:44] 2025-10-18 16:27:36,357 | INFO     |  -- lfn=log.46771637._033203.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 18:28:44] 2025-10-18 16:27:36,357 | INFO     | stage-out finished correctly
[2025-10-18 18:28:44] 2025-10-18 16:27:36,423 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 18:28:44] 2025-10-18 16:27:37,141 | INFO     | job 6848014949 has state=finished
[2025-10-18 18:28:44] 2025-10-18 16:27:37,141 | INFO     | preparing for final server update for job 6848014949 in state='finished'
[2025-10-18 18:28:44] 2025-10-18 16:27:37,142 | INFO     | this job has now completed (state=finished)
[2025-10-18 18:28:44] 2025-10-18 16:27:37,142 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 18:28:44] 2025-10-18 16:27:37,142 | INFO     | log transfer has been attempted: DONE
[2025-10-18 18:28:44] 2025-10-18 16:27:37,142 | INFO     | job 6848014949 has finished - writing final server update
[2025-10-18 18:28:44] 2025-10-18 16:27:37,142 | INFO     | total number of processed events: 400 (read)
[2025-10-18 18:28:44] 2025-10-18 16:27:37,143 | INFO     | executing command: lscpu
[2025-10-18 18:28:44] 2025-10-18 16:27:37,164 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 18:28:44] 2025-10-18 16:27:38,215 | INFO     | time since job start (4387s) is within the limit (172800.0s)
[2025-10-18 18:28:44] 2025-10-18 16:27:40,220 | INFO     | time since job start (4389s) is within the limit (172800.0s)
[2025-10-18 18:28:44] 2025-10-18 16:27:41,333 | INFO     | PID=1007327 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 18:28:44] 2025-10-18 16:27:41,899 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-18 18:28:44] 2025-10-18 16:27:41,900 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2367.8477500000004
[2025-10-18 18:28:44] 2025-10-18 16:27:41,902 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6848014949/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 18:28:44] 2025-10-18 16:27:41,903 | INFO     | extracted standard info from prmon json
[2025-10-18 18:28:44] 2025-10-18 16:27:41,903 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 18:28:44] 2025-10-18 16:27:41,903 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 18:28:44] 2025-10-18 16:27:41,904 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 18:28:44] 2025-10-18 16:27:41,904 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 18:28:44] 2025-10-18 16:27:41,905 | INFO     | fitting pss+swap vs Time
[2025-10-18 18:28:44] 2025-10-18 16:27:41,905 | INFO     | sum of square deviations: 85136480.0
[2025-10-18 18:28:44] 2025-10-18 16:27:41,906 | INFO     | sum of deviations: -7922758933.999998
[2025-10-18 18:28:44] 2025-10-18 16:27:41,906 | INFO     | mean x: 1760802753.0
[2025-10-18 18:28:44] 2025-10-18 16:27:41,906 | INFO     | mean y: 3073976.123076923
[2025-10-18 18:28:44] 2025-10-18 16:27:41,906 | INFO     | -- intersect: 163862511697.09232
[2025-10-18 18:28:44] 2025-10-18 16:27:41,906 | INFO     | intersect: 163862511697.09232
[2025-10-18 18:28:44] 2025-10-18 16:27:41,906 | INFO     | chi2: 0.1217680279498928
[2025-10-18 18:28:44] 2025-10-18 16:27:41,906 | INFO     | -- intersect: 163862511697.09232
[2025-10-18 18:28:44] 2025-10-18 16:27:41,906 | INFO     | current memory leak: -93.06 B/s (using 65 data points, chi2=0.12)
[2025-10-18 18:28:44] 2025-10-18 16:27:41,907 | INFO     | could have reported an average CPU frequency of 2572 MHz (6 samples)
[2025-10-18 18:28:44] 2025-10-18 16:27:41,907 | INFO     | ..............................
[2025-10-18 18:28:44] 2025-10-18 16:27:41,907 | INFO     | . Timing measurements:
[2025-10-18 18:28:44] 2025-10-18 16:27:41,907 | INFO     | . get job = 0 s
[2025-10-18 18:28:44] 2025-10-18 16:27:41,907 | INFO     | . initial setup = 1 s
[2025-10-18 18:28:44] 2025-10-18 16:27:41,907 | INFO     | . payload setup = 6 s
[2025-10-18 18:28:44] 2025-10-18 16:27:41,907 | INFO     | . stage-in = 0 s
[2025-10-18 18:28:44] 2025-10-18 16:27:41,907 | INFO     | . payload execution = 4359 s
[2025-10-18 18:28:44] 2025-10-18 16:27:41,907 | INFO     | . stage-out = 0 s
[2025-10-18 18:28:44] 2025-10-18 16:27:41,907 | INFO     | . log creation = 0 s
[2025-10-18 18:28:44] 2025-10-18 16:27:41,907 | INFO     | ..............................
[2025-10-18 18:28:44] 2025-10-18 16:27:42,061 | INFO     | 
[2025-10-18 18:28:44] 2025-10-18 16:27:42,061 | INFO     | job summary report
[2025-10-18 18:28:44] 2025-10-18 16:27:42,061 | INFO     | --------------------------------------------------
[2025-10-18 18:28:44] 2025-10-18 16:27:42,061 | INFO     | PanDA job id: 6848014949
[2025-10-18 18:28:44] 2025-10-18 16:27:42,061 | INFO     | task id: 46771637
[2025-10-18 18:28:44] 2025-10-18 16:27:42,061 | INFO     | errors: (none)
[2025-10-18 18:28:44] 2025-10-18 16:27:42,061 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 18:28:44] 2025-10-18 16:27:42,061 | INFO     | pilot state: finished 
[2025-10-18 18:28:44] 2025-10-18 16:27:42,061 | INFO     | transexitcode: 0
[2025-10-18 18:28:44] 2025-10-18 16:27:42,061 | INFO     | exeerrorcode: 0
[2025-10-18 18:28:44] 2025-10-18 16:27:42,062 | INFO     | exeerrordiag: 
[2025-10-18 18:28:44] 2025-10-18 16:27:42,062 | INFO     | exitcode: 0
[2025-10-18 18:28:44] 2025-10-18 16:27:42,062 | INFO     | exitmsg: OK
[2025-10-18 18:28:44] 2025-10-18 16:27:42,062 | INFO     | cpuconsumptiontime: 47452 s
[2025-10-18 18:28:44] 2025-10-18 16:27:42,062 | INFO     | nevents: 400
[2025-10-18 18:28:44] 2025-10-18 16:27:42,062 | INFO     | neventsw: 0
[2025-10-18 18:28:44] 2025-10-18 16:27:42,062 | INFO     | pid: 1014653
[2025-10-18 18:28:44] 2025-10-18 16:27:42,062 | INFO     | pgrp: 1014653
[2025-10-18 18:28:44] 2025-10-18 16:27:42,062 | INFO     | corecount: 12
[2025-10-18 18:28:44] 2025-10-18 16:27:42,062 | INFO     | event service: False
[2025-10-18 18:28:44] 2025-10-18 16:27:42,062 | INFO     | sizes: {0: 2348929, 4: 2349191, 11: 2349219, 4369: 2375374, 4370: 2384428, 4376: 2384566}
[2025-10-18 18:28:44] 2025-10-18 16:27:42,062 | INFO     | --------------------------------------------------
[2025-10-18 18:28:44] 2025-10-18 16:27:42,062 | INFO     | 
[2025-10-18 18:28:44] 2025-10-18 16:27:42,063 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-10-18 18:28:44] 2025-10-18 16:27:42,084 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,084 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,084 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,084 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,084 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,084 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,084 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,084 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,085 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,085 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,085 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,085 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,085 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 18:28:44] 2025-10-18 16:27:42,085 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,086 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 18:28:44] 2025-10-18 16:27:42,086 | INFO     | job 6848014949 has completed (purged errors)
[2025-10-18 18:28:44] 2025-10-18 16:27:42,086 | INFO     | overall cleanup function is called
[2025-10-18 18:28:44] 2025-10-18 16:27:42,176 | WARNING  | process 1014653 can no longer be monitored (due to stat problems) - aborting
[2025-10-18 18:28:44] 2025-10-18 16:27:42,241 | INFO     | using path: /var/lib/boinc/slots/4/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 18:28:44] 2025-10-18 16:27:42,317 | INFO     | number of running child processes to parent process 1014653: 1
[2025-10-18 18:28:44] 2025-10-18 16:27:42,317 | INFO     | maximum number of monitored processes: 6
[2025-10-18 18:28:44] 2025-10-18 16:27:42,317 | INFO     | aborting job monitoring since job object (job id=6848014949) has expired
[2025-10-18 18:28:44] 2025-10-18 16:27:43,093 | INFO     | --- collectZombieJob: --- 10, [1014653]
[2025-10-18 18:28:44] 2025-10-18 16:27:43,093 | INFO     | zombie collector waiting for pid 1014653
[2025-10-18 18:28:44] 2025-10-18 16:27:43,093 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 18:28:44] 2025-10-18 16:27:43,093 | INFO     | collected zombie processes
[2025-10-18 18:28:44] 2025-10-18 16:27:43,093 | INFO     | will attempt to kill all subprocesses of pid=1014653
[2025-10-18 18:28:44] 2025-10-18 16:27:43,167 | INFO     | process IDs to be killed: [1014653] (in reverse order)
[2025-10-18 18:28:44] 2025-10-18 16:27:43,205 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 18:28:44] 2025-10-18 16:27:43,206 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 18:28:44] 2025-10-18 16:27:43,208 | INFO     | did not find any defunct processes belonging to 1014653
[2025-10-18 18:28:44] 2025-10-18 16:27:43,210 | INFO     | did not find any defunct processes belonging to 1014653
[2025-10-18 18:28:44] 2025-10-18 16:27:43,210 | INFO     | ready for new job
[2025-10-18 18:28:44] 2025-10-18 16:27:43,210 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 18:28:44] 2025-10-18 16:27:43,212 | INFO     | ***************************************
[2025-10-18 18:28:44] 2025-10-18 16:27:43,212 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 18:28:44] 2025-10-18 16:27:43,212 | INFO     | ***************************************
[2025-10-18 18:28:44] 2025-10-18 16:27:43,212 | INFO     | 
[2025-10-18 18:28:44] 2025-10-18 16:27:43,212 | INFO     | architecture information:
[2025-10-18 18:28:44] 2025-10-18 16:27:43,213 | INFO     | executing command: cat /etc/os-release
[2025-10-18 18:28:44] 2025-10-18 16:27:43,225 | INFO     | cat /etc/os-release:
[2025-10-18 18:28:44] NAME="CentOS Linux"
[2025-10-18 18:28:44] VERSION="7 (Core)"
[2025-10-18 18:28:44] ID="centos"
[2025-10-18 18:28:44] ID_LIKE="rhel fedora"
[2025-10-18 18:28:44] VERSION_ID="7"
[2025-10-18 18:28:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 18:28:44] ANSI_COLOR="0;31"
[2025-10-18 18:28:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 18:28:44] HOME_URL="https://www.centos.org/"
[2025-10-18 18:28:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 18:28:44] 
[2025-10-18 18:28:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 18:28:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 18:28:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 18:28:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 18:28:44] 
[2025-10-18 18:28:44] 2025-10-18 16:27:43,225 | INFO     | ***************************************
[2025-10-18 18:28:44] 2025-10-18 16:27:43,728 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-10-18 18:28:44] 2025-10-18 16:27:43,742 | INFO     | sufficient remaining disk space (1815903993856 B)
[2025-10-18 18:28:44] 2025-10-18 16:27:43,743 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 18:28:44] 2025-10-18 16:27:43,743 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 18:28:44] 2025-10-18 16:27:43,743 | INFO     | update_server=False
[2025-10-18 18:28:44] 2025-10-18 16:27:43,743 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 18:28:44] 2025-10-18 16:27:43,743 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 18:28:44] 2025-10-18 16:27:43,743 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 18:28:44] 2025-10-18 16:27:43,743 | INFO     | aborting loop
[2025-10-18 18:28:44] 2025-10-18 16:27:44,419 | INFO     | all data control threads have been joined
[2025-10-18 18:28:44] 2025-10-18 16:27:44,439 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 18:28:44] 2025-10-18 16:27:44,748 | INFO     | [job] retrieve thread has finished
[2025-10-18 18:28:44] 2025-10-18 16:27:44,749 | INFO     | [job] queue monitor thread has finished
[2025-10-18 18:28:44] 2025-10-18 16:27:44,749 | INFO     | [job] job monitor thread has finished
[2025-10-18 18:28:44] 2025-10-18 16:27:44,809 | INFO     | [payload] validate_post thread has finished
[2025-10-18 18:28:44] 2025-10-18 16:27:44,842 | INFO     | all job control threads have been joined
[2025-10-18 18:28:44] 2025-10-18 16:27:44,927 | INFO     | all payload control threads have been joined
[2025-10-18 18:28:44] 2025-10-18 16:27:44,955 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 18:28:44] 2025-10-18 16:27:45,177 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 18:28:44] 2025-10-18 16:27:45,425 | INFO     | [data] control thread has finished
[2025-10-18 18:28:44] 2025-10-18 16:27:45,569 | INFO     | [data] copytool_in thread has finished
[2025-10-18 18:28:44] 2025-10-18 16:27:45,595 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 18:28:44] 2025-10-18 16:27:45,845 | INFO     | [job] control thread has finished
[2025-10-18 18:28:44] 2025-10-18 16:27:45,909 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 18:28:44] 2025-10-18 16:27:45,933 | INFO     | [payload] control thread has finished
[2025-10-18 18:28:44] 2025-10-18 16:27:45,937 | INFO     | [payload] failed_post thread has finished
[2025-10-18 18:28:44] 2025-10-18 16:27:46,103 | INFO     | [job] validate thread has finished
[2025-10-18 18:28:44] 2025-10-18 16:27:46,444 | INFO     | [data] copytool_out thread has finished
[2025-10-18 18:28:44] 2025-10-18 16:27:46,993 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 18:28:44] 2025-10-18 16:27:50,999 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 18:28:44] 2025-10-18 16:28:13,515 | INFO     | PID=1007327 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 18:28:44] 2025-10-18 16:28:13,516 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 18:28:44] 2025-10-18 16:28:13,516 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 18:28:44] 2025-10-18 16:28:13,516 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 18:28:44] 2025-10-18 16:28:38,530 | INFO     | [monitor] cgroup control has ended
[2025-10-18 18:28:44] 2025-10-18 16:28:39,743 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140431549835072)>', '<ExcThread(monitor, started 140430784059136)>']
[2025-10-18 18:28:44] 2025-10-18 16:28:40,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 18:28:44] 2025-10-18 16:28:40,564 | INFO     | [monitor] control thread has ended
[2025-10-18 18:28:44] 2025-10-18 16:28:44,769 | INFO     | all workflow threads have been joined
[2025-10-18 18:28:44] 2025-10-18 16:28:44,769 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 18:28:44] 2025-10-18 16:28:44,769 | INFO     | traces error code: 0
[2025-10-18 18:28:44] 2025-10-18 16:28:44,769 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 18:28:44] 2025-10-18 16:28:44,859 [wrapper] ==== pilot stdout END ====
[2025-10-18 18:28:44] 2025-10-18 16:28:44,861 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 18:28:44] 2025-10-18 16:28:44,864 [wrapper] pilotpid: 1007327
[2025-10-18 18:28:44] 2025-10-18 16:28:44,867 [wrapper] Pilot exit status: 0
[2025-10-18 18:28:44] 2025-10-18 16:28:44,875 [wrapper] pandaids: 6848014949
[2025-10-18 18:28:44] 2025-10-18 16:28:44,897 [wrapper] cleanup supervisor_pilot 1028059 1007328
[2025-10-18 18:28:44] 2025-10-18 16:28:44,899 [wrapper] Test setup, not cleaning
[2025-10-18 18:28:44] 2025-10-18 16:28:44,901 [wrapper] apfmon messages muted
[2025-10-18 18:28:44] 2025-10-18 16:28:44,903 [wrapper] ==== wrapper stdout END ====
[2025-10-18 18:28:44] 2025-10-18 16:28:44,905 [wrapper] ==== wrapper stderr END ====
[2025-10-18 18:28:44]  *** Error codes and diagnostics ***
[2025-10-18 18:28:44]     "exeErrorCode": 0,
[2025-10-18 18:28:44]     "exeErrorDiag": "",
[2025-10-18 18:28:44]     "pilotErrorCode": 0,
[2025-10-18 18:28:44]     "pilotErrorDiag": "",
[2025-10-18 18:28:44]  *** Listing of results directory ***
[2025-10-18 18:28:44] total 427040
[2025-10-18 18:28:44] -rw-r--r-- 1 boinc boinc    557409 Oct 18 00:20 pilot3.tar.gz
[2025-10-18 18:28:44] -rwx------ 1 boinc boinc     36292 Oct 18 00:26 runpilot2-wrapper.sh
[2025-10-18 18:28:44] -rw-r--r-- 1 boinc boinc      5112 Oct 18 00:26 queuedata.json
[2025-10-18 18:28:44] -rw-r--r-- 1 boinc boinc       100 Oct 18 17:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 18:28:44] -rwxr-xr-x 1 boinc boinc      7986 Oct 18 17:14 run_atlas
[2025-10-18 18:28:44] -rw-r--r-- 1 boinc boinc       105 Oct 18 17:14 job.xml
[2025-10-18 18:28:44] -rw-r--r-- 1 boinc boinc      6294 Oct 18 17:14 init_data.xml
[2025-10-18 18:28:44] -rw-r--r-- 2 boinc boinc 229881327 Oct 18 17:14 EVNT.46771634._001461.pool.root.1
[2025-10-18 18:28:44] -rw-r--r-- 2 boinc boinc     15120 Oct 18 17:14 start_atlas.sh
[2025-10-18 18:28:44] drwxrwx--x 2 boinc boinc        68 Oct 18 17:14 shared
[2025-10-18 18:28:44] -rw-r--r-- 2 boinc boinc    569677 Oct 18 17:14 input.tar.gz
[2025-10-18 18:28:44] -rw-r--r-- 1 boinc boinc         0 Oct 18 17:14 boinc_lockfile
[2025-10-18 18:28:44] -rw-r--r-- 1 boinc boinc      2558 Oct 18 17:14 pandaJob.out
[2025-10-18 18:28:44] -rw------- 1 boinc boinc    976750 Oct 18 17:14 agis_schedconf.cvmfs.json
[2025-10-18 18:28:44] -rw------- 1 boinc boinc   1560740 Oct 18 17:14 agis_ddmendpoints.agis.ALL.json
[2025-10-18 18:28:44] drwx------ 5 boinc boinc      4096 Oct 18 17:14 pilot3
[2025-10-18 18:28:44] -rw------- 1 boinc boinc 201462774 Oct 18 18:27 HITS.46771637._033203.pool.root.1
[2025-10-18 18:28:44] -rw-r--r-- 1 boinc boinc       529 Oct 18 18:27 boinc_task_state.xml
[2025-10-18 18:28:44] -rw------- 1 boinc boinc        95 Oct 18 18:27 pilot_heartbeat.json
[2025-10-18 18:28:44] -rw------- 1 boinc boinc      1018 Oct 18 18:27 memory_monitor_summary.json
[2025-10-18 18:28:44] -rw------- 1 boinc boinc    389036 Oct 18 18:27 log.46771637._033203.job.log.tgz.1
[2025-10-18 18:28:44] -rw------- 1 boinc boinc      7787 Oct 18 18:27 heartbeat.json
[2025-10-18 18:28:44] -rw-r--r-- 1 boinc boinc        27 Oct 18 18:28 wrapper_checkpoint.txt
[2025-10-18 18:28:44] -rw-r--r-- 1 boinc boinc      8192 Oct 18 18:28 boinc_mmap_file
[2025-10-18 18:28:44] -rw------- 1 boinc boinc      4750 Oct 18 18:28 pilotlog.txt
[2025-10-18 18:28:44] -rw------- 1 boinc boinc    639659 Oct 18 18:28 log.46771637._033203.job.log.1
[2025-10-18 18:28:44] -rw------- 1 boinc boinc       357 Oct 18 18:28 output.list
[2025-10-18 18:28:44] -rw-r--r-- 1 boinc boinc       620 Oct 18 18:28 runtime_log
[2025-10-18 18:28:44] -rw------- 1 boinc boinc   1044480 Oct 18 18:28 result.tar.gz
[2025-10-18 18:28:44] -rw-r--r-- 1 boinc boinc      8727 Oct 18 18:28 runtime_log.err
[2025-10-18 18:28:44] -rw------- 1 boinc boinc       658 Oct 18 18:28 hBDNDma57T8n9Rq4apOajLDm4fhM0noT9bVof3QYDmAxaMDmW6ErTm.diag
[2025-10-18 18:28:44] -rw-r--r-- 1 boinc boinc     21893 Oct 18 18:28 stderr.txt
[2025-10-18 18:28:44] HITS file was successfully produced:
[2025-10-18 18:28:44] -rw------- 1 boinc boinc 201462774 Oct 18 18:27 shared/HITS.pool.root.1
[2025-10-18 18:28:44]  *** Contents of shared directory: ***
[2025-10-18 18:28:44] total 422836
[2025-10-18 18:28:44] -rw-r--r-- 2 boinc boinc 229881327 Oct 18 17:14 ATLAS.root_0
[2025-10-18 18:28:44] -rw-r--r-- 2 boinc boinc     15120 Oct 18 17:14 start_atlas.sh
[2025-10-18 18:28:44] -rw-r--r-- 2 boinc boinc    569677 Oct 18 17:14 input.tar.gz
[2025-10-18 18:28:44] -rw------- 1 boinc boinc 201462774 Oct 18 18:27 HITS.pool.root.1
[2025-10-18 18:28:44] -rw------- 1 boinc boinc   1044480 Oct 18 18:28 result.tar.gz
18:28:46 (1003563): run_atlas exited; CPU time 47456.758946
18:28:46 (1003563): called boinc_finish(0)

</stderr_txt>
]]>

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