Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:59:37 (1173004): wrapper (7.7.26015): starting
19:59:37 (1173004): wrapper: running run_atlas (--nthreads 4)
[2025-10-18 19:59:37] Arguments: --nthreads 4
[2025-10-18 19:59:37] Threads: 4
[2025-10-18 19:59:37] Checking for CVMFS
[2025-10-18 19:59:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 19:59:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 19:59:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 19:59:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 19:59:37] 2.9.2.0 4165322 3751 94584 151859 1 57 29773481 36864001 0 130560 0 3078628 99.991 134708 2796 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-18 19:59:37] CVMFS is ok
[2025-10-18 19:59:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 19:59:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 19:59:37] Further information can be found at the LHC@home message board.
[2025-10-18 19:59:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 19:59:37] Checking for apptainer binary...
[2025-10-18 19:59:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 19:59:37] Running /usr/bin/apptainer --version
[2025-10-18 19:59:37] apptainer version 1.4.1-1.1
[2025-10-18 19:59:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 19:59:37] thA309
[2025-10-18 19:59:37] apptainer works
[2025-10-18 19:59:37] Set ATHENA_PROC_NUMBER=4
[2025-10-18 19:59:37] Set ATHENA_CORE_NUMBER=4
[2025-10-18 19:59:37] Starting ATLAS job with PandaID=6849576045
[2025-10-18 19:59:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 20:57:56]  *** The last 200 lines of the pilot log: ***
[2025-10-18 20:57:56] 2025-10-18 18:57:03,498 | INFO     | update_server=False
[2025-10-18 20:57:56] 2025-10-18 18:57:03,498 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 20:57:56] 2025-10-18 18:57:03,498 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 20:57:56] 2025-10-18 18:57:03,498 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 20:57:56] 2025-10-18 18:57:03,499 | INFO     | aborting loop
[2025-10-18 20:57:56] 2025-10-18 18:57:03,499 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 20:57:56] 2025-10-18 18:57:04,095 | INFO     | all payload control threads have been joined
[2025-10-18 20:57:56] 2025-10-18 18:57:04,302 | INFO     | all job control threads have been joined
[2025-10-18 20:57:56] 2025-10-18 18:57:04,432 | INFO     | all data control threads have been joined
[2025-10-18 20:57:56] 2025-10-18 18:57:04,504 | INFO     | [job] retrieve thread has finished
[2025-10-18 20:57:56] 2025-10-18 18:57:04,504 | INFO     | [job] job monitor thread has finished
[2025-10-18 20:57:56] 2025-10-18 18:57:04,504 | INFO     | [job] queue monitor thread has finished
[2025-10-18 20:57:56] 2025-10-18 18:57:04,926 | INFO     | [payload] validate_post thread has finished
[2025-10-18 20:57:56] 2025-10-18 18:57:05,100 | INFO     | [payload] control thread has finished
[2025-10-18 20:57:56] 2025-10-18 18:57:05,240 | INFO     | [job] validate thread has finished
[2025-10-18 20:57:56] 2025-10-18 18:57:05,292 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 20:57:56] 2025-10-18 18:57:05,307 | INFO     | [job] control thread has finished
[2025-10-18 20:57:56] 2025-10-18 18:57:05,356 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 20:57:56] 2025-10-18 18:57:05,390 | INFO     | [payload] failed_post thread has finished
[2025-10-18 20:57:56] 2025-10-18 18:57:05,438 | INFO     | [data] control thread has finished
[2025-10-18 20:57:56] 2025-10-18 18:57:05,472 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 20:57:56] 2025-10-18 18:57:05,505 | INFO     | [data] copytool_out thread has finished
[2025-10-18 20:57:56] 2025-10-18 18:57:05,787 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 20:57:56] 2025-10-18 18:57:05,933 | INFO     | [data] copytool_in thread has finished
[2025-10-18 20:57:56] 2025-10-18 18:57:09,363 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 20:57:56] 2025-10-18 18:57:14,414 | INFO     | job.realtimelogging is not enabled
[2025-10-18 20:57:56] 2025-10-18 18:57:15,419 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 20:57:56] 2025-10-18 18:57:33,361 | INFO     | PID=1176783 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 20:57:56] 2025-10-18 18:57:33,361 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 20:57:56] 2025-10-18 18:57:33,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 20:57:56] 2025-10-18 18:57:33,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 20:57:56] 2025-10-18 18:57:49,835 | INFO     | [monitor] cgroup control has ended
[2025-10-18 20:57:56] 2025-10-18 18:57:50,797 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139675579598656)>', '<ExcThread(monitor, started 139674408445696)>']
[2025-10-18 20:57:56] 2025-10-18 18:57:51,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 20:57:56] 2025-10-18 18:57:51,458 | INFO     | [monitor] control thread has ended
[2025-10-18 20:57:56] 2025-10-18 18:57:55,823 | INFO     | all workflow threads have been joined
[2025-10-18 20:57:56] 2025-10-18 18:57:55,823 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 20:57:56] 2025-10-18 18:57:55,823 | INFO     | traces error code: 0
[2025-10-18 20:57:56] 2025-10-18 18:57:55,824 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 20:57:56] 2025-10-18 18:57:55,908 [wrapper] ==== pilot stdout END ====
[2025-10-18 20:57:56] 2025-10-18 18:57:55,912 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 20:57:56] 2025-10-18 18:57:55,916 [wrapper] pilotpid: 1176783
[2025-10-18 20:57:56] 2025-10-18 18:57:55,921 [wrapper] Pilot exit status: 0
[2025-10-18 20:57:56] 2025-10-18 18:57:55,933 [wrapper] pandaids: 6849576045
[2025-10-18 20:57:56] 2025-10-18 18:57:55,958 [wrapper] cleanup supervisor_pilot 1193004 1176784
[2025-10-18 20:57:56] 2025-10-18 18:57:55,962 [wrapper] Test setup, not cleaning
[2025-10-18 20:57:56] 2025-10-18 18:57:55,966 [wrapper] apfmon messages muted
[2025-10-18 20:57:56] 2025-10-18 18:57:55,970 [wrapper] ==== wrapper stdout END ====
[2025-10-18 20:57:56] 2025-10-18 18:57:55,974 [wrapper] ==== wrapper stderr END ====
[2025-10-18 20:57:56]  *** Error codes and diagnostics ***
[2025-10-18 20:57:56]     "exeErrorCode": 0,
[2025-10-18 20:57:56]     "exeErrorDiag": "",
[2025-10-18 20:57:56]     "pilotErrorCode": 0,
[2025-10-18 20:57:56]     "pilotErrorDiag": "",
[2025-10-18 20:57:56]  *** Listing of results directory ***
[2025-10-18 20:57:56] total 334004
[2025-10-18 20:57:56] -rw-r--r-- 1 boinc boinc    557409 Oct 18 04:03 pilot3.tar.gz
[2025-10-18 20:57:56] -rw-r--r-- 1 boinc boinc      5112 Oct 18 04:10 queuedata.json
[2025-10-18 20:57:56] -rwx------ 1 boinc boinc     36292 Oct 18 04:10 runpilot2-wrapper.sh
[2025-10-18 20:57:56] -rw-r--r-- 1 boinc boinc       100 Oct 18 19:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 20:57:56] -rwxr-xr-x 1 boinc boinc      7986 Oct 18 19:59 run_atlas
[2025-10-18 20:57:56] -rw-r--r-- 1 boinc boinc       105 Oct 18 19:59 job.xml
[2025-10-18 20:57:56] -rw-r--r-- 2 boinc boinc 190383574 Oct 18 19:59 EVNT.46808900._000038.pool.root.1
[2025-10-18 20:57:56] -rw-r--r-- 2 boinc boinc    569664 Oct 18 19:59 input.tar.gz
[2025-10-18 20:57:56] -rw-r--r-- 2 boinc boinc     15120 Oct 18 19:59 start_atlas.sh
[2025-10-18 20:57:56] drwxrwx--x 2 boinc boinc      4096 Oct 18 19:59 shared
[2025-10-18 20:57:56] -rw-r--r-- 1 boinc boinc         0 Oct 18 19:59 boinc_setup_complete
[2025-10-18 20:57:56] -rw-r--r-- 1 boinc boinc      6377 Oct 18 19:59 init_data.xml
[2025-10-18 20:57:56] -rw-r--r-- 1 boinc boinc         0 Oct 18 19:59 boinc_lockfile
[2025-10-18 20:57:56] -rw-r--r-- 1 boinc boinc      2500 Oct 18 19:59 pandaJob.out
[2025-10-18 20:57:56] -rw------- 1 boinc boinc    976742 Oct 18 19:59 agis_schedconf.cvmfs.json
[2025-10-18 20:57:56] -rw------- 1 boinc boinc   1560740 Oct 18 19:59 agis_ddmendpoints.agis.ALL.json
[2025-10-18 20:57:56] drwx------ 5 boinc boinc      4096 Oct 18 19:59 pilot3
[2025-10-18 20:57:56] -rw------- 1 boinc boinc 146190663 Oct 18 20:56 HITS.46808902._000847.pool.root.1
[2025-10-18 20:57:56] -rw-r--r-- 1 boinc boinc       529 Oct 18 20:56 boinc_task_state.xml
[2025-10-18 20:57:56] -rw------- 1 boinc boinc      1021 Oct 18 20:56 memory_monitor_summary.json
[2025-10-18 20:57:56] -rw------- 1 boinc boinc    257854 Oct 18 20:56 log.46808902._000847.job.log.tgz.1
[2025-10-18 20:57:56] -rw------- 1 boinc boinc      7750 Oct 18 20:57 heartbeat.json
[2025-10-18 20:57:56] -rw-r--r-- 1 boinc boinc      8192 Oct 18 20:57 boinc_mmap_file
[2025-10-18 20:57:56] -rw-r--r-- 1 boinc boinc        27 Oct 18 20:57 wrapper_checkpoint.txt
[2025-10-18 20:57:56] -rw------- 1 boinc boinc        95 Oct 18 20:57 pilot_heartbeat.json
[2025-10-18 20:57:56] -rw------- 1 boinc boinc      4824 Oct 18 20:57 pilotlog.txt
[2025-10-18 20:57:56] -rw------- 1 boinc boinc    519351 Oct 18 20:57 log.46808902._000847.job.log.1
[2025-10-18 20:57:56] -rw------- 1 boinc boinc       357 Oct 18 20:57 output.list
[2025-10-18 20:57:56] -rw-r--r-- 1 boinc boinc       620 Oct 18 20:57 runtime_log
[2025-10-18 20:57:56] -rw------- 1 boinc boinc    798720 Oct 18 20:57 result.tar.gz
[2025-10-18 20:57:56] -rw-r--r-- 1 boinc boinc      8777 Oct 18 20:57 runtime_log.err
[2025-10-18 20:57:56] -rw------- 1 boinc boinc       657 Oct 18 20:57 2yMMDm4ZBU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmonvNDmSQuOFm.diag
[2025-10-18 20:57:56] -rw-r--r-- 1 boinc boinc      7509 Oct 18 20:57 stderr.txt
[2025-10-18 20:57:56] HITS file was successfully produced:
[2025-10-18 20:57:56] -rw------- 1 boinc boinc 146190663 Oct 18 20:56 shared/HITS.pool.root.1
[2025-10-18 20:57:56]  *** Contents of shared directory: ***
[2025-10-18 20:57:56] total 330056
[2025-10-18 20:57:56] -rw-r--r-- 2 boinc boinc 190383574 Oct 18 19:59 ATLAS.root_0
[2025-10-18 20:57:56] -rw-r--r-- 2 boinc boinc    569664 Oct 18 19:59 input.tar.gz
[2025-10-18 20:57:56] -rw-r--r-- 2 boinc boinc     15120 Oct 18 19:59 start_atlas.sh
[2025-10-18 20:57:56] -rw------- 1 boinc boinc 146190663 Oct 18 20:56 HITS.pool.root.1
[2025-10-18 20:57:56] -rw------- 1 boinc boinc    798720 Oct 18 20:57 result.tar.gz
20:57:57 (1173004): run_atlas exited; CPU time 12754.251857
20:57:57 (1173004): called boinc_finish(0)

</stderr_txt>
]]>

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