Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:19:51 (1573): wrapper (7.7.26015): starting
03:19:51 (1573): wrapper: running run_atlas (--nthreads 8)
[2025-10-18 03:19:51] Arguments: --nthreads 8
[2025-10-18 03:19:51] Threads: 8
[2025-10-18 03:19:51] Checking for CVMFS
[2025-10-18 03:19:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 03:19:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 03:19:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 03:19:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 03:19:52] 2.11.2.0 2698 16834 78600 151843 3 56 10911792 20275200 1 130560 0 8932529 99.988 562847 35784 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 03:19:52] CVMFS is ok
[2025-10-18 03:19:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 03:19:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 03:19:52] Further information can be found at the LHC@home message board.
[2025-10-18 03:19:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 03:19:52] Checking for apptainer binary...
[2025-10-18 03:19:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 03:19:52] Running /usr/bin/apptainer --version
[2025-10-18 03:19:52] apptainer version 1.3.2-1.el7
[2025-10-18 03:19:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 03:19:53] c-204-2.aglt2.org
[2025-10-18 03:19:53] apptainer works
[2025-10-18 03:19:53] Set ATHENA_PROC_NUMBER=8
[2025-10-18 03:19:53] Set ATHENA_CORE_NUMBER=8
[2025-10-18 03:19:53] Starting ATLAS job with PandaID=6849576048
[2025-10-18 03:19:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 04:55:25]  *** The last 200 lines of the pilot log: ***
[2025-10-18 04:55:25]  storage_token=
[2025-10-18 04:55:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6849576048/log.46808902._000850.job.log.tgz.1
[2025-10-18 04:55:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/98/log.46808902._000850.job.log.tgz.1
[2025-10-18 04:55:25]  workdir=None
[2025-10-18 04:55:25] ]
[2025-10-18 04:55:25] 2025-10-18 08:54:33,743 | INFO     | time since job start (5663s) is within the limit (172800.0s)
[2025-10-18 04:55:25] 2025-10-18 08:54:33,794 | INFO     | transferring file log.46808902._000850.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6849576048/log.46808902._000850.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-18 04:55:25] 2025-10-18 08:54:33,794 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6849576048/log.46808902._000850.job.log.tgz.1 /tmp/boinchome/slots/0/log.46808902._000850.job
[2025-10-18 04:55:25] 2025-10-18 08:54:33,819 | INFO     | adding to output.list: log.46808902._000850.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/98/log.46808902._000850.job.log.tg
[2025-10-18 04:55:25] 2025-10-18 08:54:33,820 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 04:55:25] 2025-10-18 08:54:33,821 | INFO     | summary of transferred files:
[2025-10-18 04:55:25] 2025-10-18 08:54:33,821 | INFO     |  -- lfn=log.46808902._000850.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 04:55:25] 2025-10-18 08:54:33,821 | INFO     | stage-out finished correctly
[2025-10-18 04:55:25] 2025-10-18 08:54:34,900 | INFO     | monitor loop #425: job 0:6849576048 is in state 'finished'
[2025-10-18 04:55:25] 2025-10-18 08:54:34,901 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 04:55:25] 2025-10-18 08:54:35,749 | INFO     | time since job start (5665s) is within the limit (172800.0s)
[2025-10-18 04:55:25] 2025-10-18 08:54:37,242 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 04:55:25] 2025-10-18 08:54:37,330 | INFO     | job 6849576048 has state=finished
[2025-10-18 04:55:25] 2025-10-18 08:54:37,330 | INFO     | preparing for final server update for job 6849576048 in state='finished'
[2025-10-18 04:55:25] 2025-10-18 08:54:37,331 | INFO     | this job has now completed (state=finished)
[2025-10-18 04:55:25] 2025-10-18 08:54:37,331 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 04:55:25] 2025-10-18 08:54:37,331 | INFO     | log transfer has been attempted: DONE
[2025-10-18 04:55:25] 2025-10-18 08:54:37,332 | INFO     | job 6849576048 has finished - writing final server update
[2025-10-18 04:55:25] 2025-10-18 08:54:37,332 | INFO     | total number of processed events: 400 (read)
[2025-10-18 04:55:25] 2025-10-18 08:54:37,335 | INFO     | executing command: lscpu
[2025-10-18 04:55:25] 2025-10-18 08:54:37,367 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 04:55:25] 2025-10-18 08:54:37,404 | INFO     | monitor loop #426: job 0:6849576048 is in state 'finished'
[2025-10-18 04:55:25] 2025-10-18 08:54:37,404 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 04:55:25] 2025-10-18 08:54:37,755 | INFO     | time since job start (5667s) is within the limit (172800.0s)
[2025-10-18 04:55:25] 2025-10-18 08:54:39,761 | INFO     | time since job start (5669s) is within the limit (172800.0s)
[2025-10-18 04:55:25] 2025-10-18 08:54:39,907 | INFO     | monitor loop #427: job 0:6849576048 is in state 'finished'
[2025-10-18 04:55:25] 2025-10-18 08:54:39,908 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 04:55:25] 2025-10-18 08:54:41,766 | INFO     | time since job start (5671s) is within the limit (172800.0s)
[2025-10-18 04:55:25] 2025-10-18 08:54:42,410 | INFO     | monitor loop #428: job 0:6849576048 is in state 'finished'
[2025-10-18 04:55:25] 2025-10-18 08:54:42,411 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 04:55:25] 2025-10-18 08:54:42,990 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-18 04:55:25] 2025-10-18 08:54:42,992 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-10-18 04:55:25] 2025-10-18 08:54:43,000 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6849576048/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 04:55:25] 2025-10-18 08:54:43,001 | INFO     | extracted standard info from prmon json
[2025-10-18 04:55:25] 2025-10-18 08:54:43,002 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 04:55:25] 2025-10-18 08:54:43,002 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 04:55:25] 2025-10-18 08:54:43,002 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 04:55:25] 2025-10-18 08:54:43,002 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 04:55:25] 2025-10-18 08:54:43,005 | INFO     | fitting pss+swap vs Time
[2025-10-18 04:55:25] 2025-10-18 08:54:43,006 | INFO     | sum of square deviations: 197203697.5
[2025-10-18 04:55:25] 2025-10-18 08:54:43,006 | INFO     | sum of deviations: -13749985600.0
[2025-10-18 04:55:25] 2025-10-18 08:54:43,006 | INFO     | mean x: 1760774938.5
[2025-10-18 04:55:25] 2025-10-18 08:54:43,007 | INFO     | mean y: 2663593.1627906975
[2025-10-18 04:55:25] 2025-10-18 08:54:43,007 | INFO     | -- intersect: 122772319315.34256
[2025-10-18 04:55:25] 2025-10-18 08:54:43,007 | INFO     | intersect: 122772319315.34256
[2025-10-18 04:55:25] 2025-10-18 08:54:43,007 | INFO     | chi2: 0.10718032629424619
[2025-10-18 04:55:25] 2025-10-18 08:54:43,007 | INFO     | -- intersect: 122772319315.34256
[2025-10-18 04:55:25] 2025-10-18 08:54:43,007 | INFO     | current memory leak: -69.72 B/s (using 86 data points, chi2=0.11)
[2025-10-18 04:55:25] 2025-10-18 08:54:43,008 | INFO     | could have reported an average CPU frequency of 1969 MHz (7 samples)
[2025-10-18 04:55:25] 2025-10-18 08:54:43,008 | INFO     | ..............................
[2025-10-18 04:55:25] 2025-10-18 08:54:43,008 | INFO     | . Timing measurements:
[2025-10-18 04:55:25] 2025-10-18 08:54:43,008 | INFO     | . get job = 0 s
[2025-10-18 04:55:25] 2025-10-18 08:54:43,008 | INFO     | . initial setup = 2 s
[2025-10-18 04:55:25] 2025-10-18 08:54:43,008 | INFO     | . payload setup = 7 s
[2025-10-18 04:55:25] 2025-10-18 08:54:43,008 | INFO     | . stage-in = 0 s
[2025-10-18 04:55:25] 2025-10-18 08:54:43,009 | INFO     | . payload execution = 5633 s
[2025-10-18 04:55:25] 2025-10-18 08:54:43,009 | INFO     | . stage-out = 0 s
[2025-10-18 04:55:25] 2025-10-18 08:54:43,009 | INFO     | . log creation = 0 s
[2025-10-18 04:55:25] 2025-10-18 08:54:43,009 | INFO     | ..............................
[2025-10-18 04:55:25] 2025-10-18 08:54:43,099 | INFO     | 
[2025-10-18 04:55:25] 2025-10-18 08:54:43,099 | INFO     | job summary report
[2025-10-18 04:55:25] 2025-10-18 08:54:43,099 | INFO     | --------------------------------------------------
[2025-10-18 04:55:25] 2025-10-18 08:54:43,100 | INFO     | PanDA job id: 6849576048
[2025-10-18 04:55:25] 2025-10-18 08:54:43,100 | INFO     | task id: 46808902
[2025-10-18 04:55:25] 2025-10-18 08:54:43,100 | INFO     | errors: (none)
[2025-10-18 04:55:25] 2025-10-18 08:54:43,100 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 04:55:25] 2025-10-18 08:54:43,100 | INFO     | pilot state: finished 
[2025-10-18 04:55:25] 2025-10-18 08:54:43,101 | INFO     | transexitcode: 0
[2025-10-18 04:55:25] 2025-10-18 08:54:43,101 | INFO     | exeerrorcode: 0
[2025-10-18 04:55:25] 2025-10-18 08:54:43,101 | INFO     | exeerrordiag: 
[2025-10-18 04:55:25] 2025-10-18 08:54:43,101 | INFO     | exitcode: 0
[2025-10-18 04:55:25] 2025-10-18 08:54:43,101 | INFO     | exitmsg: OK
[2025-10-18 04:55:25] 2025-10-18 08:54:43,101 | INFO     | cpuconsumptiontime: 41515 s
[2025-10-18 04:55:25] 2025-10-18 08:54:43,102 | INFO     | nevents: 400
[2025-10-18 04:55:25] 2025-10-18 08:54:43,102 | INFO     | neventsw: 0
[2025-10-18 04:55:25] 2025-10-18 08:54:43,102 | INFO     | pid: 13903
[2025-10-18 04:55:25] 2025-10-18 08:54:43,102 | INFO     | pgrp: 13903
[2025-10-18 04:55:25] 2025-10-18 08:54:43,102 | INFO     | corecount: 8
[2025-10-18 04:55:25] 2025-10-18 08:54:43,102 | INFO     | event service: False
[2025-10-18 04:55:25] 2025-10-18 08:54:43,103 | INFO     | sizes: {0: 2348672, 1: 2348871, 6: 2349133, 11: 2349161, 5645: 2375789, 5646: 2384787, 5649: 2384971, 5655: 2385165}
[2025-10-18 04:55:25] 2025-10-18 08:54:43,103 | INFO     | --------------------------------------------------
[2025-10-18 04:55:25] 2025-10-18 08:54:43,103 | INFO     | 
[2025-10-18 04:55:25] 2025-10-18 08:54:43,103 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 04:55:25] 2025-10-18 08:54:43,133 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,134 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,134 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,134 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,134 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,135 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,135 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,135 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,135 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,136 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,136 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,136 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,136 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,136 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,137 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 04:55:25] 2025-10-18 08:54:43,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,137 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 04:55:25] 2025-10-18 08:54:43,137 | INFO     | job 6849576048 has completed (purged errors)
[2025-10-18 04:55:25] 2025-10-18 08:54:43,138 | INFO     | overall cleanup function is called
[2025-10-18 04:55:25] 2025-10-18 08:54:44,146 | INFO     | --- collectZombieJob: --- 10, [13903]
[2025-10-18 04:55:25] 2025-10-18 08:54:44,146 | INFO     | zombie collector waiting for pid 13903
[2025-10-18 04:55:25] 2025-10-18 08:54:44,146 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 04:55:25] 2025-10-18 08:54:44,146 | INFO     | collected zombie processes
[2025-10-18 04:55:25] 2025-10-18 08:54:44,147 | INFO     | will attempt to kill all subprocesses of pid=13903
[2025-10-18 04:55:25] 2025-10-18 08:54:44,222 | INFO     | process IDs to be killed: [13903] (in reverse order)
[2025-10-18 04:55:25] 2025-10-18 08:54:44,281 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 04:55:25] 2025-10-18 08:54:44,281 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 04:55:25] 2025-10-18 08:54:44,285 | INFO     | did not find any defunct processes belonging to 13903
[2025-10-18 04:55:25] 2025-10-18 08:54:44,288 | INFO     | did not find any defunct processes belonging to 13903
[2025-10-18 04:55:25] 2025-10-18 08:54:44,288 | INFO     | ready for new job
[2025-10-18 04:55:25] 2025-10-18 08:54:44,288 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 04:55:25] 2025-10-18 08:54:44,290 | INFO     | ***************************************
[2025-10-18 04:55:25] 2025-10-18 08:54:44,290 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 04:55:25] 2025-10-18 08:54:44,290 | INFO     | ***************************************
[2025-10-18 04:55:25] 2025-10-18 08:54:44,290 | INFO     | 
[2025-10-18 04:55:25] 2025-10-18 08:54:44,291 | INFO     | architecture information:
[2025-10-18 04:55:25] 2025-10-18 08:54:44,291 | INFO     | executing command: cat /etc/os-release
[2025-10-18 04:55:25] 2025-10-18 08:54:44,311 | INFO     | cat /etc/os-release:
[2025-10-18 04:55:25] NAME="CentOS Linux"
[2025-10-18 04:55:25] VERSION="7 (Core)"
[2025-10-18 04:55:25] ID="centos"
[2025-10-18 04:55:25] ID_LIKE="rhel fedora"
[2025-10-18 04:55:25] VERSION_ID="7"
[2025-10-18 04:55:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 04:55:25] ANSI_COLOR="0;31"
[2025-10-18 04:55:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 04:55:25] HOME_URL="https://www.centos.org/"
[2025-10-18 04:55:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 04:55:25] 
[2025-10-18 04:55:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 04:55:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 04:55:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 04:55:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 04:55:25] 
[2025-10-18 04:55:25] 2025-10-18 08:54:44,312 | INFO     | ***************************************
[2025-10-18 04:55:25] 2025-10-18 08:54:44,815 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 04:55:25] 2025-10-18 08:54:44,838 | INFO     | sufficient remaining disk space (18701352960 B)
[2025-10-18 04:55:25] 2025-10-18 08:54:44,838 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 04:55:25] 2025-10-18 08:54:44,838 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 04:55:25] 2025-10-18 08:54:44,839 | INFO     | update_server=False
[2025-10-18 04:55:25] 2025-10-18 08:54:44,839 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 04:55:25] 2025-10-18 08:54:44,839 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 04:55:25] 2025-10-18 08:54:44,840 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 04:55:25] 2025-10-18 08:54:44,914 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-18 04:55:25] 2025-10-18 08:54:44,914 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-18 04:55:25] 2025-10-18 08:54:44,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 04:55:25] 2025-10-18 08:54:44,915 | INFO     | will abort loop
[2025-10-18 04:55:25] 2025-10-18 08:54:45,272 | INFO     | all payload control threads have been joined
[2025-10-18 04:55:25] 2025-10-18 08:54:45,758 | INFO     | all data control threads have been joined
[2025-10-18 04:55:25] 2025-10-18 08:54:45,782 | INFO     | all job control threads have been joined
[2025-10-18 04:55:25] 2025-10-18 08:54:45,844 | INFO     | [job] queue monitor thread has finished
[2025-10-18 04:55:25] 2025-10-18 08:54:45,845 | INFO     | [job] retrieve thread has finished
[2025-10-18 04:55:25] 2025-10-18 08:54:45,857 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 04:55:25] 2025-10-18 08:54:45,920 | INFO     | [job] job monitor thread has finished
[2025-10-18 04:55:25] 2025-10-18 08:54:46,242 | INFO     | [payload] failed_post thread has finished
[2025-10-18 04:55:25] 2025-10-18 08:54:46,277 | INFO     | [payload] control thread has finished
[2025-10-18 04:55:25] 2025-10-18 08:54:46,364 | INFO     | [job] validate thread has finished
[2025-10-18 04:55:25] 2025-10-18 08:54:46,456 | INFO     | [data] copytool_in thread has finished
[2025-10-18 04:55:25] 2025-10-18 08:54:46,738 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 04:55:25] 2025-10-18 08:54:46,763 | INFO     | [data] control thread has finished
[2025-10-18 04:55:25] 2025-10-18 08:54:46,788 | INFO     | [job] control thread has finished
[2025-10-18 04:55:25] 2025-10-18 08:54:46,818 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 04:55:25] 2025-10-18 08:54:46,845 | INFO     | [payload] validate_post thread has finished
[2025-10-18 04:55:25] 2025-10-18 08:54:46,846 | INFO     | [data] copytool_out thread has finished
[2025-10-18 04:55:25] 2025-10-18 08:54:46,956 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 04:55:25] 2025-10-18 08:54:47,837 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 04:55:25] 2025-10-18 08:54:51,843 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 04:55:25] 2025-10-18 08:55:14,959 | INFO     | PID=6174 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-18 04:55:25] 2025-10-18 08:55:14,960 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 04:55:25] 2025-10-18 08:55:14,960 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 04:55:25] 2025-10-18 08:55:14,960 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 04:55:25] 2025-10-18 08:55:19,049 | INFO     | [monitor] cgroup control has ended
[2025-10-18 04:55:25] 2025-10-18 08:55:20,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139658709796672)>', '<ExcThread(monitor, started 139657790592768)>']
[2025-10-18 04:55:25] 2025-10-18 08:55:20,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 04:55:25] 2025-10-18 08:55:20,991 | INFO     | [monitor] control thread has ended
[2025-10-18 04:55:25] 2025-10-18 08:55:25,061 | INFO     | all workflow threads have been joined
[2025-10-18 04:55:25] 2025-10-18 08:55:25,062 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 04:55:25] 2025-10-18 08:55:25,070 | INFO     | traces error code: 0
[2025-10-18 04:55:25] 2025-10-18 08:55:25,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 04:55:25] 2025-10-18 08:55:25,191 [wrapper] ==== pilot stdout END ====
[2025-10-18 04:55:25] 2025-10-18 08:55:25,196 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 04:55:25] 2025-10-18 08:55:25,201 [wrapper] pilotpid: 6174
[2025-10-18 04:55:25] 2025-10-18 08:55:25,205 [wrapper] Pilot exit status: 0
[2025-10-18 04:55:25] 2025-10-18 08:55:25,222 [wrapper] pandaids: 6849576048
[2025-10-18 04:55:25] 2025-10-18 08:55:25,263 [wrapper] cleanup supervisor_pilot 16980 6175
[2025-10-18 04:55:25] 2025-10-18 08:55:25,268 [wrapper] Test setup, not cleaning
[2025-10-18 04:55:25] 2025-10-18 08:55:25,273 [wrapper] apfmon messages muted
[2025-10-18 04:55:25] 2025-10-18 08:55:25,277 [wrapper] ==== wrapper stdout END ====
[2025-10-18 04:55:25] 2025-10-18 08:55:25,282 [wrapper] ==== wrapper stderr END ====
[2025-10-18 04:55:25]  *** Error codes and diagnostics ***
[2025-10-18 04:55:25]     "exeErrorCode": 0,
[2025-10-18 04:55:25]     "exeErrorDiag": "",
[2025-10-18 04:55:25]     "pilotErrorCode": 0,
[2025-10-18 04:55:25]     "pilotErrorDiag": "",
[2025-10-18 04:55:25]  *** Listing of results directory ***
[2025-10-18 04:55:25] total 332100
[2025-10-18 04:55:25] -rw-r--r-- 1 boincer umatlas    557409 Oct 17 22:03 pilot3.tar.gz
[2025-10-18 04:55:25] -rw-r--r-- 1 boincer umatlas      5112 Oct 17 22:10 queuedata.json
[2025-10-18 04:55:25] -rwx------ 1 boincer umatlas     36292 Oct 17 22:10 runpilot2-wrapper.sh
[2025-10-18 04:55:25] -rw-r--r-- 1 boincer umatlas       100 Oct 18 03:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 04:55:25] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 03:19 run_atlas
[2025-10-18 04:55:25] -rw-r--r-- 1 boincer umatlas       105 Oct 18 03:19 job.xml
[2025-10-18 04:55:25] -rw-r--r-- 2 boincer umatlas 190383574 Oct 18 03:19 EVNT.46808900._000038.pool.root.1
[2025-10-18 04:55:25] -rw-r--r-- 2 boincer umatlas    569666 Oct 18 03:19 input.tar.gz
[2025-10-18 04:55:25] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 03:19 start_atlas.sh
[2025-10-18 04:55:25] drwxrwx--x 2 boincer umatlas      4096 Oct 18 03:19 shared
[2025-10-18 04:55:25] -rw-r--r-- 1 boincer umatlas         0 Oct 18 03:19 boinc_lockfile
[2025-10-18 04:55:25] -rw-r--r-- 1 boincer umatlas      2500 Oct 18 03:19 pandaJob.out
[2025-10-18 04:55:25] -rw------- 1 boincer umatlas    976741 Oct 18 03:20 agis_schedconf.cvmfs.json
[2025-10-18 04:55:25] -rw------- 1 boincer umatlas   1560740 Oct 18 03:20 agis_ddmendpoints.agis.ALL.json
[2025-10-18 04:55:25] drwx------ 5 boincer umatlas      4096 Oct 18 03:20 pilot3
[2025-10-18 04:55:25] -rw-r--r-- 1 boincer umatlas      5909 Oct 18 04:49 init_data.xml
[2025-10-18 04:55:25] -rw------- 1 boincer umatlas 143449000 Oct 18 04:54 HITS.46808902._000850.pool.root.1
[2025-10-18 04:55:25] -rw------- 1 boincer umatlas        95 Oct 18 04:54 pilot_heartbeat.json
[2025-10-18 04:55:25] -rw-r--r-- 1 boincer umatlas       530 Oct 18 04:54 boinc_task_state.xml
[2025-10-18 04:55:25] -rw------- 1 boincer umatlas      1060 Oct 18 04:54 memory_monitor_summary.json
[2025-10-18 04:55:25] -rw------- 1 boincer umatlas    357541 Oct 18 04:54 log.46808902._000850.job.log.tgz.1
[2025-10-18 04:55:25] -rw------- 1 boincer umatlas      7842 Oct 18 04:54 heartbeat.json
[2025-10-18 04:55:25] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 04:55 boinc_mmap_file
[2025-10-18 04:55:25] -rw-r--r-- 1 boincer umatlas        27 Oct 18 04:55 wrapper_checkpoint.txt
[2025-10-18 04:55:25] -rw------- 1 boincer umatlas      4931 Oct 18 04:55 pilotlog.txt
[2025-10-18 04:55:25] -rw------- 1 boincer umatlas    814085 Oct 18 04:55 log.46808902._000850.job.log.1
[2025-10-18 04:55:25] -rw------- 1 boincer umatlas       357 Oct 18 04:55 output.list
[2025-10-18 04:55:25] -rw-r--r-- 1 boincer umatlas       620 Oct 18 04:55 runtime_log
[2025-10-18 04:55:25] -rw------- 1 boincer umatlas   1187840 Oct 18 04:55 result.tar.gz
[2025-10-18 04:55:25] -rw-r--r-- 1 boincer umatlas      8698 Oct 18 04:55 runtime_log.err
[2025-10-18 04:55:25] -rw------- 1 boincer umatlas       657 Oct 18 04:55 MWUMDm4ZBU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrnvNDmm6dEYo.diag
[2025-10-18 04:55:25] -rw-r--r-- 1 boincer umatlas     22166 Oct 18 04:55 stderr.txt
[2025-10-18 04:55:25] HITS file was successfully produced:
[2025-10-18 04:55:25] -rw------- 1 boincer umatlas 143449000 Oct 18 04:54 shared/HITS.pool.root.1
[2025-10-18 04:55:25]  *** Contents of shared directory: ***
[2025-10-18 04:55:25] total 327748
[2025-10-18 04:55:25] -rw-r--r-- 2 boincer umatlas 190383574 Oct 18 03:19 ATLAS.root_0
[2025-10-18 04:55:25] -rw-r--r-- 2 boincer umatlas    569666 Oct 18 03:19 input.tar.gz
[2025-10-18 04:55:25] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 03:19 start_atlas.sh
[2025-10-18 04:55:25] -rw------- 1 boincer umatlas 143449000 Oct 18 04:54 HITS.pool.root.1
[2025-10-18 04:55:25] -rw------- 1 boincer umatlas   1187840 Oct 18 04:55 result.tar.gz
04:55:26 (1573): run_atlas exited; CPU time 41502.054807
04:55:26 (1573): called boinc_finish(0)

</stderr_txt>
]]>

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