Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:59:31 (1616868): wrapper (7.7.26015): starting
18:59:31 (1616868): wrapper: running run_atlas (--nthreads 4)
[2025-10-18 18:59:31] Arguments: --nthreads 4
[2025-10-18 18:59:31] Threads: 4
[2025-10-18 18:59:31] Checking for CVMFS
[2025-10-18 18:59:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 18:59:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 18:59:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 18:59:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 18:59:31] 2.9.2.0 85452 3763 98596 151858 2 57 23331552 36864000 0 130560 0 4032597 99.993 137310 2650 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-18 18:59:31] CVMFS is ok
[2025-10-18 18:59:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 18:59:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 18:59:31] Further information can be found at the LHC@home message board.
[2025-10-18 18:59:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 18:59:31] Checking for apptainer binary...
[2025-10-18 18:59:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 18:59:31] Running /usr/bin/apptainer --version
[2025-10-18 18:59:31] apptainer version 1.4.1-1.1
[2025-10-18 18:59:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 18:59:31] thA373a
[2025-10-18 18:59:31] apptainer works
[2025-10-18 18:59:31] Set ATHENA_PROC_NUMBER=4
[2025-10-18 18:59:31] Set ATHENA_CORE_NUMBER=4
[2025-10-18 18:59:31] Starting ATLAS job with PandaID=6848017982
[2025-10-18 18:59:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 20:21:50]  *** The last 200 lines of the pilot log: ***
[2025-10-18 20:21:50] 2025-10-18 18:20:54,335 | INFO     | update_server=False
[2025-10-18 20:21:50] 2025-10-18 18:20:54,335 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 20:21:50] 2025-10-18 18:20:54,336 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 20:21:50] 2025-10-18 18:20:54,336 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 20:21:50] 2025-10-18 18:20:54,336 | INFO     | aborting loop
[2025-10-18 20:21:50] 2025-10-18 18:20:54,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 20:21:50] 2025-10-18 18:20:54,959 | INFO     | all data control threads have been joined
[2025-10-18 20:21:50] 2025-10-18 18:20:55,124 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 20:21:50] 2025-10-18 18:20:55,158 | INFO     | all payload control threads have been joined
[2025-10-18 20:21:50] 2025-10-18 18:20:55,336 | INFO     | [job] retrieve thread has finished
[2025-10-18 20:21:50] 2025-10-18 18:20:55,340 | INFO     | [job] job monitor thread has finished
[2025-10-18 20:21:50] 2025-10-18 18:20:55,341 | INFO     | [job] queue monitor thread has finished
[2025-10-18 20:21:50] 2025-10-18 18:20:55,684 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 20:21:50] 2025-10-18 18:20:55,833 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 20:21:50] 2025-10-18 18:20:55,839 | INFO     | all job control threads have been joined
[2025-10-18 20:21:50] 2025-10-18 18:20:55,964 | INFO     | [data] control thread has finished
[2025-10-18 20:21:50] 2025-10-18 18:20:56,163 | INFO     | [payload] control thread has finished
[2025-10-18 20:21:50] 2025-10-18 18:20:56,328 | INFO     | [payload] validate_post thread has finished
[2025-10-18 20:21:50] 2025-10-18 18:20:56,341 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 20:21:50] 2025-10-18 18:20:56,341 | INFO     | [data] copytool_out thread has finished
[2025-10-18 20:21:50] 2025-10-18 18:20:56,604 | INFO     | [job] validate thread has finished
[2025-10-18 20:21:50] 2025-10-18 18:20:56,642 | INFO     | [data] copytool_in thread has finished
[2025-10-18 20:21:50] 2025-10-18 18:20:56,708 | INFO     | [payload] failed_post thread has finished
[2025-10-18 20:21:50] 2025-10-18 18:20:56,744 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 20:21:50] 2025-10-18 18:20:56,845 | INFO     | [job] control thread has finished
[2025-10-18 20:21:50] 2025-10-18 18:20:59,130 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 20:21:50] 2025-10-18 18:21:24,530 | INFO     | PID=1620675 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 20:21:50] 2025-10-18 18:21:24,531 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 20:21:50] 2025-10-18 18:21:24,531 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 20:21:50] 2025-10-18 18:21:24,531 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 20:21:50] 2025-10-18 18:21:44,133 | INFO     | [monitor] cgroup control has ended
[2025-10-18 20:21:50] 2025-10-18 18:21:44,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139833441421120)>', '<ExcThread(monitor, started 139832659539712)>']
[2025-10-18 20:21:50] 2025-10-18 18:21:45,637 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 20:21:50] 2025-10-18 18:21:45,638 | INFO     | [monitor] control thread has ended
[2025-10-18 20:21:50] 2025-10-18 18:21:49,868 | INFO     | all workflow threads have been joined
[2025-10-18 20:21:50] 2025-10-18 18:21:49,869 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 20:21:50] 2025-10-18 18:21:49,869 | INFO     | traces error code: 0
[2025-10-18 20:21:50] 2025-10-18 18:21:49,869 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 20:21:50] 2025-10-18 18:21:49,946 [wrapper] ==== pilot stdout END ====
[2025-10-18 20:21:50] 2025-10-18 18:21:49,949 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 20:21:50] 2025-10-18 18:21:49,953 [wrapper] pilotpid: 1620675
[2025-10-18 20:21:50] 2025-10-18 18:21:49,958 [wrapper] Pilot exit status: 0
[2025-10-18 20:21:50] 2025-10-18 18:21:49,969 [wrapper] pandaids: 6848017982
[2025-10-18 20:21:50] 2025-10-18 18:21:49,992 [wrapper] cleanup supervisor_pilot 1639926 1620676
[2025-10-18 20:21:50] 2025-10-18 18:21:49,996 [wrapper] Test setup, not cleaning
[2025-10-18 20:21:50] 2025-10-18 18:21:49,999 [wrapper] apfmon messages muted
[2025-10-18 20:21:50] 2025-10-18 18:21:50,003 [wrapper] ==== wrapper stdout END ====
[2025-10-18 20:21:50] 2025-10-18 18:21:50,006 [wrapper] ==== wrapper stderr END ====
[2025-10-18 20:21:50]  *** Error codes and diagnostics ***
[2025-10-18 20:21:50]     "exeErrorCode": 0,
[2025-10-18 20:21:50]     "exeErrorDiag": "",
[2025-10-18 20:21:50]     "pilotErrorCode": 0,
[2025-10-18 20:21:50]     "pilotErrorDiag": "",
[2025-10-18 20:21:50]  *** Listing of results directory ***
[2025-10-18 20:21:50] total 434960
[2025-10-18 20:21:50] -rw-r--r-- 1 boinc boinc      5112 Oct 18 03:09 queuedata.json
[2025-10-18 20:21:50] -rw-r--r-- 1 boinc boinc    557409 Oct 18 03:10 pilot3.tar.gz
[2025-10-18 20:21:50] -rwx------ 1 boinc boinc     36292 Oct 18 03:10 runpilot2-wrapper.sh
[2025-10-18 20:21:50] -rw-r--r-- 1 boinc boinc       100 Oct 18 18:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 20:21:50] -rwxr-xr-x 1 boinc boinc      7986 Oct 18 18:59 run_atlas
[2025-10-18 20:21:50] -rw-r--r-- 1 boinc boinc       105 Oct 18 18:59 job.xml
[2025-10-18 20:21:50] -rw-r--r-- 2 boinc boinc 228858554 Oct 18 18:59 EVNT.46771634._001561.pool.root.1
[2025-10-18 20:21:50] -rw-r--r-- 2 boinc boinc    569679 Oct 18 18:59 input.tar.gz
[2025-10-18 20:21:50] -rw-r--r-- 2 boinc boinc     15120 Oct 18 18:59 start_atlas.sh
[2025-10-18 20:21:50] drwxrwx--x 2 boinc boinc      4096 Oct 18 18:59 shared
[2025-10-18 20:21:50] -rw-r--r-- 1 boinc boinc         0 Oct 18 18:59 boinc_setup_complete
[2025-10-18 20:21:50] -rw-r--r-- 1 boinc boinc      6376 Oct 18 18:59 init_data.xml
[2025-10-18 20:21:50] -rw-r--r-- 1 boinc boinc         0 Oct 18 18:59 boinc_lockfile
[2025-10-18 20:21:50] -rw-r--r-- 1 boinc boinc      2556 Oct 18 18:59 pandaJob.out
[2025-10-18 20:21:50] -rw------- 1 boinc boinc    976750 Oct 18 18:59 agis_schedconf.cvmfs.json
[2025-10-18 20:21:50] -rw------- 1 boinc boinc   1560740 Oct 18 18:59 agis_ddmendpoints.agis.ALL.json
[2025-10-18 20:21:50] drwx------ 5 boinc boinc      4096 Oct 18 18:59 pilot3
[2025-10-18 20:21:50] -rw------- 1 boinc boinc 210705271 Oct 18 20:20 HITS.46771637._035114.pool.root.1
[2025-10-18 20:21:50] -rw-r--r-- 1 boinc boinc       529 Oct 18 20:20 boinc_task_state.xml
[2025-10-18 20:21:50] -rw------- 1 boinc boinc      1022 Oct 18 20:20 memory_monitor_summary.json
[2025-10-18 20:21:50] -rw------- 1 boinc boinc    255907 Oct 18 20:20 log.46771637._035114.job.log.tgz.1
[2025-10-18 20:21:50] -rw------- 1 boinc boinc      7759 Oct 18 20:20 heartbeat.json
[2025-10-18 20:21:50] -rw------- 1 boinc boinc        95 Oct 18 20:21 pilot_heartbeat.json
[2025-10-18 20:21:50] -rw-r--r-- 1 boinc boinc      8192 Oct 18 20:21 boinc_mmap_file
[2025-10-18 20:21:50] -rw-r--r-- 1 boinc boinc        27 Oct 18 20:21 wrapper_checkpoint.txt
[2025-10-18 20:21:50] -rw------- 1 boinc boinc      4752 Oct 18 20:21 pilotlog.txt
[2025-10-18 20:21:50] -rw------- 1 boinc boinc    716081 Oct 18 20:21 log.46771637._035114.job.log.1
[2025-10-18 20:21:50] -rw------- 1 boinc boinc       357 Oct 18 20:21 output.list
[2025-10-18 20:21:50] -rw-r--r-- 1 boinc boinc       620 Oct 18 20:21 runtime_log
[2025-10-18 20:21:50] -rw------- 1 boinc boinc    993280 Oct 18 20:21 result.tar.gz
[2025-10-18 20:21:50] -rw------- 1 boinc boinc       659 Oct 18 20:21 6WsNDmAeAU8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwbvNDmK8wUtm.diag
[2025-10-18 20:21:50] -rw-r--r-- 1 boinc boinc      8782 Oct 18 20:21 runtime_log.err
[2025-10-18 20:21:50] -rw-r--r-- 1 boinc boinc      7414 Oct 18 20:21 stderr.txt
[2025-10-18 20:21:50] HITS file was successfully produced:
[2025-10-18 20:21:50] -rw------- 1 boinc boinc 210705271 Oct 18 20:20 shared/HITS.pool.root.1
[2025-10-18 20:21:50]  *** Contents of shared directory: ***
[2025-10-18 20:21:50] total 430820
[2025-10-18 20:21:50] -rw-r--r-- 2 boinc boinc 228858554 Oct 18 18:59 ATLAS.root_0
[2025-10-18 20:21:50] -rw-r--r-- 2 boinc boinc    569679 Oct 18 18:59 input.tar.gz
[2025-10-18 20:21:50] -rw-r--r-- 2 boinc boinc     15120 Oct 18 18:59 start_atlas.sh
[2025-10-18 20:21:50] -rw------- 1 boinc boinc 210705271 Oct 18 20:20 HITS.pool.root.1
[2025-10-18 20:21:50] -rw------- 1 boinc boinc    993280 Oct 18 20:21 result.tar.gz
20:21:51 (1616868): run_atlas exited; CPU time 18464.927496
20:21:51 (1616868): called boinc_finish(0)

</stderr_txt>
]]>

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