Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:29:54 (851445): wrapper (7.7.26015): starting
04:29:54 (851445): wrapper: running run_atlas (--nthreads 12)
[2025-10-18 04:29:54] Arguments: --nthreads 12
[2025-10-18 04:29:54] Threads: 12
[2025-10-18 04:29:54] Checking for CVMFS
[2025-10-18 04:29:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 04:29:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 04:29:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 04:29:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 04:29:54] 2.13.2.0 770942 163 45336 151846 0 57 5231136 6144000 0 130560 0 134308 99.989 6748 939 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-18 04:29:54] CVMFS is ok
[2025-10-18 04:29:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 04:29:54] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-18 04:29:54] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-18 04:29:54] Further information can be found at the LHC@home message board.
[2025-10-18 04:29:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 04:29:54] Checking for apptainer binary...
[2025-10-18 04:29:54] apptainer is not installed, using version from CVMFS
[2025-10-18 04:29:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 04:29:55] ace
[2025-10-18 04:29:55] apptainer works
[2025-10-18 04:29:55] Set ATHENA_PROC_NUMBER=12
[2025-10-18 04:29:55] Set ATHENA_CORE_NUMBER=12
[2025-10-18 04:29:55] Starting ATLAS job with PandaID=6837364823
[2025-10-18 04:29:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 05:42:16]  *** The last 200 lines of the pilot log: ***
[2025-10-18 05:42:16]  workdir=None
[2025-10-18 05:42:16] ]
[2025-10-18 05:42:16] 2025-10-18 10:41:02,355 | INFO     | transferring file log.46676269._027199.job.log.tgz.1 from /var/lib/boinc-client/slots/4/PanDA_Pilot-6837364823/log.46676269._027199.job.log.tgz.1 to /var/lib/boinc
[2025-10-18 05:42:16] 2025-10-18 10:41:02,355 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/4/PanDA_Pilot-6837364823/log.46676269._027199.job.log.tgz.1 /var/lib/boinc-client/slots/4/log.466762
[2025-10-18 05:42:16] 2025-10-18 10:41:02,374 | INFO     | adding to output.list: log.46676269._027199.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/2b/log.46676269._027199.job.log.tg
[2025-10-18 05:42:16] 2025-10-18 10:41:02,375 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 05:42:16] 2025-10-18 10:41:02,375 | INFO     | summary of transferred files:
[2025-10-18 05:42:16] 2025-10-18 10:41:02,375 | INFO     |  -- lfn=log.46676269._027199.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 05:42:16] 2025-10-18 10:41:02,375 | INFO     | stage-out finished correctly
[2025-10-18 05:42:16] 2025-10-18 10:41:02,419 | INFO     | time since job start (4258s) is within the limit (172800.0s)
[2025-10-18 05:42:16] 2025-10-18 10:41:04,139 | INFO     | monitor loop #320: job 0:6837364823 is in state 'finished'
[2025-10-18 05:42:16] 2025-10-18 10:41:04,139 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 05:42:16] 2025-10-18 10:41:04,430 | INFO     | time since job start (4260s) is within the limit (172800.0s)
[2025-10-18 05:42:16] 2025-10-18 10:41:05,702 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 05:42:16] 2025-10-18 10:41:06,435 | INFO     | time since job start (4262s) is within the limit (172800.0s)
[2025-10-18 05:42:16] 2025-10-18 10:41:06,642 | INFO     | monitor loop #321: job 0:6837364823 is in state 'finished'
[2025-10-18 05:42:16] 2025-10-18 10:41:06,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 05:42:16] 2025-10-18 10:41:07,356 | INFO     | job 6837364823 has state=finished
[2025-10-18 05:42:16] 2025-10-18 10:41:07,356 | INFO     | preparing for final server update for job 6837364823 in state='finished'
[2025-10-18 05:42:16] 2025-10-18 10:41:07,357 | INFO     | this job has now completed (state=finished)
[2025-10-18 05:42:16] 2025-10-18 10:41:07,357 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 05:42:16] 2025-10-18 10:41:07,357 | INFO     | log transfer has been attempted: DONE
[2025-10-18 05:42:16] 2025-10-18 10:41:07,357 | INFO     | job 6837364823 has finished - writing final server update
[2025-10-18 05:42:16] 2025-10-18 10:41:07,357 | INFO     | total number of processed events: 400 (read)
[2025-10-18 05:42:16] 2025-10-18 10:41:07,357 | INFO     | executing command: lscpu
[2025-10-18 05:42:16] 2025-10-18 10:41:07,371 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 05:42:16] 2025-10-18 10:41:08,438 | INFO     | time since job start (4264s) is within the limit (172800.0s)
[2025-10-18 05:42:16] 2025-10-18 10:41:09,145 | INFO     | monitor loop #322: job 0:6837364823 is in state 'finished'
[2025-10-18 05:42:16] 2025-10-18 10:41:09,145 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 05:42:16] 2025-10-18 10:41:10,444 | INFO     | time since job start (4266s) is within the limit (172800.0s)
[2025-10-18 05:42:16] 2025-10-18 10:41:11,646 | INFO     | monitor loop #323: job 0:6837364823 is in state 'finished'
[2025-10-18 05:42:16] 2025-10-18 10:41:11,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 05:42:16] 2025-10-18 10:41:12,446 | INFO     | time since job start (4268s) is within the limit (172800.0s)
[2025-10-18 05:42:16] 2025-10-18 10:41:14,149 | INFO     | monitor loop #324: job 0:6837364823 is in state 'finished'
[2025-10-18 05:42:16] 2025-10-18 10:41:14,149 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 05:42:16] 2025-10-18 10:41:14,452 | INFO     | time since job start (4270s) is within the limit (172800.0s)
[2025-10-18 05:42:16] 2025-10-18 10:41:15,072 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-18 05:42:16] 2025-10-18 10:41:15,074 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 2490.4163125
[2025-10-18 05:42:16] 2025-10-18 10:41:15,076 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6837364823/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 05:42:16] 2025-10-18 10:41:15,077 | INFO     | extracted standard info from prmon json
[2025-10-18 05:42:16] 2025-10-18 10:41:15,077 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 05:42:16] 2025-10-18 10:41:15,077 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 05:42:16] 2025-10-18 10:41:15,077 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 05:42:16] 2025-10-18 10:41:15,077 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 05:42:16] 2025-10-18 10:41:15,078 | INFO     | fitting pss+swap vs Time
[2025-10-18 05:42:16] 2025-10-18 10:41:15,078 | INFO     | sum of square deviations: 77515872.0
[2025-10-18 05:42:16] 2025-10-18 10:41:15,079 | INFO     | sum of deviations: -11945351657.000002
[2025-10-18 05:42:16] 2025-10-18 10:41:15,079 | INFO     | mean x: 1760782022.0
[2025-10-18 05:42:16] 2025-10-18 10:41:15,079 | INFO     | mean y: 2938596.8095238097
[2025-10-18 05:42:16] 2025-10-18 10:41:15,079 | INFO     | -- intersect: 271342986788.6626
[2025-10-18 05:42:16] 2025-10-18 10:41:15,079 | INFO     | intersect: 271342986788.6626
[2025-10-18 05:42:16] 2025-10-18 10:41:15,079 | INFO     | chi2: 0.09137715553329735
[2025-10-18 05:42:16] 2025-10-18 10:41:15,079 | INFO     | -- intersect: 271342986788.6626
[2025-10-18 05:42:16] 2025-10-18 10:41:15,079 | INFO     | current memory leak: -154.10 B/s (using 63 data points, chi2=0.09)
[2025-10-18 05:42:16] 2025-10-18 10:41:15,079 | INFO     | could have reported an average CPU frequency of 2360 MHz (6 samples)
[2025-10-18 05:42:16] 2025-10-18 10:41:15,079 | INFO     | ..............................
[2025-10-18 05:42:16] 2025-10-18 10:41:15,079 | INFO     | . Timing measurements:
[2025-10-18 05:42:16] 2025-10-18 10:41:15,079 | INFO     | . get job = 0 s
[2025-10-18 05:42:16] 2025-10-18 10:41:15,079 | INFO     | . initial setup = 2 s
[2025-10-18 05:42:16] 2025-10-18 10:41:15,079 | INFO     | . payload setup = 4 s
[2025-10-18 05:42:16] 2025-10-18 10:41:15,079 | INFO     | . stage-in = 0 s
[2025-10-18 05:42:16] 2025-10-18 10:41:15,079 | INFO     | . payload execution = 4236 s
[2025-10-18 05:42:16] 2025-10-18 10:41:15,080 | INFO     | . stage-out = 0 s
[2025-10-18 05:42:16] 2025-10-18 10:41:15,080 | INFO     | . log creation = 0 s
[2025-10-18 05:42:16] 2025-10-18 10:41:15,080 | INFO     | ..............................
[2025-10-18 05:42:16] 2025-10-18 10:41:15,133 | INFO     | 
[2025-10-18 05:42:16] 2025-10-18 10:41:15,133 | INFO     | job summary report
[2025-10-18 05:42:16] 2025-10-18 10:41:15,133 | INFO     | --------------------------------------------------
[2025-10-18 05:42:16] 2025-10-18 10:41:15,133 | INFO     | PanDA job id: 6837364823
[2025-10-18 05:42:16] 2025-10-18 10:41:15,133 | INFO     | task id: 46676269
[2025-10-18 05:42:16] 2025-10-18 10:41:15,133 | INFO     | errors: (none)
[2025-10-18 05:42:16] 2025-10-18 10:41:15,133 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 05:42:16] 2025-10-18 10:41:15,133 | INFO     | pilot state: finished 
[2025-10-18 05:42:16] 2025-10-18 10:41:15,133 | INFO     | transexitcode: 0
[2025-10-18 05:42:16] 2025-10-18 10:41:15,133 | INFO     | exeerrorcode: 0
[2025-10-18 05:42:16] 2025-10-18 10:41:15,133 | INFO     | exeerrordiag: 
[2025-10-18 05:42:16] 2025-10-18 10:41:15,133 | INFO     | exitcode: 0
[2025-10-18 05:42:16] 2025-10-18 10:41:15,133 | INFO     | exitmsg: OK
[2025-10-18 05:42:16] 2025-10-18 10:41:15,134 | INFO     | cpuconsumptiontime: 47460 s
[2025-10-18 05:42:16] 2025-10-18 10:41:15,134 | INFO     | nevents: 400
[2025-10-18 05:42:16] 2025-10-18 10:41:15,134 | INFO     | neventsw: 0
[2025-10-18 05:42:16] 2025-10-18 10:41:15,134 | INFO     | pid: 861836
[2025-10-18 05:42:16] 2025-10-18 10:41:15,134 | INFO     | pgrp: 861836
[2025-10-18 05:42:16] 2025-10-18 10:41:15,134 | INFO     | corecount: 12
[2025-10-18 05:42:16] 2025-10-18 10:41:15,134 | INFO     | event service: False
[2025-10-18 05:42:16] 2025-10-18 10:41:15,134 | INFO     | sizes: {0: 2348757, 1: 2348956, 3: 2349218, 11: 2349246, 4244: 2384320, 4248: 2384320, 4257: 2384642}
[2025-10-18 05:42:16] 2025-10-18 10:41:15,134 | INFO     | --------------------------------------------------
[2025-10-18 05:42:16] 2025-10-18 10:41:15,134 | INFO     | 
[2025-10-18 05:42:16] 2025-10-18 10:41:15,134 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-10-18 05:42:16] 2025-10-18 10:41:15,153 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,153 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,153 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,153 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,153 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,153 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,154 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,154 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,154 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,154 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,154 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,154 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,154 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,154 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,154 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,154 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,154 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,154 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 05:42:16] 2025-10-18 10:41:15,154 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,154 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 05:42:16] 2025-10-18 10:41:15,154 | INFO     | job 6837364823 has completed (purged errors)
[2025-10-18 05:42:16] 2025-10-18 10:41:15,154 | INFO     | overall cleanup function is called
[2025-10-18 05:42:16] 2025-10-18 10:41:16,162 | INFO     | --- collectZombieJob: --- 10, [861836]
[2025-10-18 05:42:16] 2025-10-18 10:41:16,162 | INFO     | zombie collector waiting for pid 861836
[2025-10-18 05:42:16] 2025-10-18 10:41:16,162 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 05:42:16] 2025-10-18 10:41:16,162 | INFO     | collected zombie processes
[2025-10-18 05:42:16] 2025-10-18 10:41:16,162 | INFO     | will attempt to kill all subprocesses of pid=861836
[2025-10-18 05:42:16] 2025-10-18 10:41:16,231 | INFO     | process IDs to be killed: [861836] (in reverse order)
[2025-10-18 05:42:16] 2025-10-18 10:41:16,264 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 05:42:16] 2025-10-18 10:41:16,265 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 05:42:16] 2025-10-18 10:41:16,267 | INFO     | did not find any defunct processes belonging to 861836
[2025-10-18 05:42:16] 2025-10-18 10:41:16,269 | INFO     | did not find any defunct processes belonging to 861836
[2025-10-18 05:42:16] 2025-10-18 10:41:16,269 | INFO     | ready for new job
[2025-10-18 05:42:16] 2025-10-18 10:41:16,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 05:42:16] 2025-10-18 10:41:16,270 | INFO     | ***************************************
[2025-10-18 05:42:16] 2025-10-18 10:41:16,270 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 05:42:16] 2025-10-18 10:41:16,270 | INFO     | ***************************************
[2025-10-18 05:42:16] 2025-10-18 10:41:16,270 | INFO     | 
[2025-10-18 05:42:16] 2025-10-18 10:41:16,271 | INFO     | architecture information:
[2025-10-18 05:42:16] 2025-10-18 10:41:16,271 | INFO     | executing command: cat /etc/os-release
[2025-10-18 05:42:16] 2025-10-18 10:41:16,281 | INFO     | cat /etc/os-release:
[2025-10-18 05:42:16] NAME="CentOS Linux"
[2025-10-18 05:42:16] VERSION="7 (Core)"
[2025-10-18 05:42:16] ID="centos"
[2025-10-18 05:42:16] ID_LIKE="rhel fedora"
[2025-10-18 05:42:16] VERSION_ID="7"
[2025-10-18 05:42:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 05:42:16] ANSI_COLOR="0;31"
[2025-10-18 05:42:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 05:42:16] HOME_URL="https://www.centos.org/"
[2025-10-18 05:42:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 05:42:16] 
[2025-10-18 05:42:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 05:42:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 05:42:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 05:42:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 05:42:16] 
[2025-10-18 05:42:16] 2025-10-18 10:41:16,281 | INFO     | ***************************************
[2025-10-18 05:42:16] 2025-10-18 10:41:16,783 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-10-18 05:42:16] 2025-10-18 10:41:16,810 | INFO     | sufficient remaining disk space (20525875200 B)
[2025-10-18 05:42:16] 2025-10-18 10:41:16,811 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 05:42:16] 2025-10-18 10:41:16,811 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 05:42:16] 2025-10-18 10:41:16,811 | INFO     | update_server=False
[2025-10-18 05:42:16] 2025-10-18 10:41:16,811 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 05:42:16] 2025-10-18 10:41:16,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 05:42:16] 2025-10-18 10:41:16,812 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 05:42:16] 2025-10-18 10:41:17,103 | INFO     | all payload control threads have been joined
[2025-10-18 05:42:16] 2025-10-18 10:41:17,302 | INFO     | all data control threads have been joined
[2025-10-18 05:42:16] 2025-10-18 10:41:17,657 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 05:42:16] 2025-10-18 10:41:17,658 | INFO     | aborting loop
[2025-10-18 05:42:16] 2025-10-18 10:41:17,716 | INFO     | all job control threads have been joined
[2025-10-18 05:42:16] 2025-10-18 10:41:17,814 | INFO     | [job] queue monitor thread has finished
[2025-10-18 05:42:16] 2025-10-18 10:41:17,815 | INFO     | [job] retrieve thread has finished
[2025-10-18 05:42:16] 2025-10-18 10:41:17,821 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 05:42:16] 2025-10-18 10:41:17,854 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 05:42:16] 2025-10-18 10:41:17,937 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 05:42:16] 2025-10-18 10:41:18,109 | INFO     | [payload] control thread has finished
[2025-10-18 05:42:16] 2025-10-18 10:41:18,307 | INFO     | [data] control thread has finished
[2025-10-18 05:42:16] 2025-10-18 10:41:18,659 | INFO     | [job] job monitor thread has finished
[2025-10-18 05:42:16] 2025-10-18 10:41:18,721 | INFO     | [job] control thread has finished
[2025-10-18 05:42:16] 2025-10-18 10:41:18,897 | INFO     | [payload] validate_post thread has finished
[2025-10-18 05:42:16] 2025-10-18 10:41:18,927 | INFO     | [job] validate thread has finished
[2025-10-18 05:42:16] 2025-10-18 10:41:19,205 | INFO     | [data] copytool_in thread has finished
[2025-10-18 05:42:16] 2025-10-18 10:41:19,213 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 05:42:16] 2025-10-18 10:41:19,383 | INFO     | [payload] failed_post thread has finished
[2025-10-18 05:42:16] 2025-10-18 10:41:19,943 | INFO     | [data] copytool_out thread has finished
[2025-10-18 05:42:16] 2025-10-18 10:41:20,816 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 05:42:16] 2025-10-18 10:41:27,810 | INFO     | job.realtimelogging is not enabled
[2025-10-18 05:42:16] 2025-10-18 10:41:28,815 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 05:42:16] 2025-10-18 10:41:47,618 | INFO     | PID=855240 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-18 05:42:16] 2025-10-18 10:41:47,618 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 05:42:16] 2025-10-18 10:41:47,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 05:42:16] 2025-10-18 10:41:47,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 05:42:16] 2025-10-18 10:42:10,901 | INFO     | [monitor] cgroup control has ended
[2025-10-18 05:42:16] 2025-10-18 10:42:11,317 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140137804568384)>', '<ExcThread(monitor, started 140137090492160)>']
[2025-10-18 05:42:16] 2025-10-18 10:42:11,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 05:42:16] 2025-10-18 10:42:11,716 | INFO     | [monitor] control thread has ended
[2025-10-18 05:42:16] 2025-10-18 10:42:16,327 | INFO     | all workflow threads have been joined
[2025-10-18 05:42:16] 2025-10-18 10:42:16,327 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 05:42:16] 2025-10-18 10:42:16,327 | INFO     | traces error code: 0
[2025-10-18 05:42:16] 2025-10-18 10:42:16,327 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 05:42:16] 2025-10-18 10:42:16,442 [wrapper] ==== pilot stdout END ====
[2025-10-18 05:42:16] 2025-10-18 10:42:16,444 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 05:42:16] 2025-10-18 10:42:16,446 [wrapper] pilotpid: 855240
[2025-10-18 05:42:16] 2025-10-18 10:42:16,451 [wrapper] Pilot exit status: 0
[2025-10-18 05:42:16] 2025-10-18 10:42:16,459 [wrapper] pandaids: 6837364823
[2025-10-18 05:42:16] 2025-10-18 10:42:16,485 [wrapper] cleanup supervisor_pilot  882543 855241
[2025-10-18 05:42:16] 2025-10-18 10:42:16,487 [wrapper] Test setup, not cleaning
[2025-10-18 05:42:16] 2025-10-18 10:42:16,489 [wrapper] apfmon messages muted
[2025-10-18 05:42:16] 2025-10-18 10:42:16,491 [wrapper] ==== wrapper stdout END ====
[2025-10-18 05:42:16] 2025-10-18 10:42:16,493 [wrapper] ==== wrapper stderr END ====
[2025-10-18 05:42:16]  *** Error codes and diagnostics ***
[2025-10-18 05:42:16]     "exeErrorCode": 0,
[2025-10-18 05:42:16]     "exeErrorDiag": "",
[2025-10-18 05:42:16]     "pilotErrorCode": 0,
[2025-10-18 05:42:16]     "pilotErrorDiag": "",
[2025-10-18 05:42:16]  *** Listing of results directory ***
[2025-10-18 05:42:16] total 410976
[2025-10-18 05:42:16] -rw-r--r-- 1 boinc boinc    557409 Oct  9 17:12 pilot3.tar.gz
[2025-10-18 05:42:16] -rwx------ 1 boinc boinc     36292 Oct  9 17:14 runpilot2-wrapper.sh
[2025-10-18 05:42:16] -rw-r--r-- 1 boinc boinc      5112 Oct  9 17:14 queuedata.json
[2025-10-18 05:42:16] -rw-r--r-- 1 boinc boinc       100 Oct 18 04:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 05:42:16] -rwxr-xr-x 1 boinc boinc      7986 Oct 18 04:29 run_atlas
[2025-10-18 05:42:16] -rw-r--r-- 1 boinc boinc       105 Oct 18 04:29 job.xml
[2025-10-18 05:42:16] drwxrwx--x 2 boinc boinc      4096 Oct 18 04:29 shared
[2025-10-18 05:42:16] -rw-r--r-- 2 boinc boinc    569674 Oct 18 04:29 input.tar.gz
[2025-10-18 05:42:16] -rw-r--r-- 1 boinc boinc      6988 Oct 18 04:29 init_data.xml
[2025-10-18 05:42:16] -rw-r--r-- 2 boinc boinc 221813811 Oct 18 04:29 EVNT.46676267._001143.pool.root.1
[2025-10-18 05:42:16] -rw-r--r-- 2 boinc boinc     15120 Oct 18 04:29 start_atlas.sh
[2025-10-18 05:42:16] -rw-r--r-- 1 boinc boinc         0 Oct 18 04:29 boinc_lockfile
[2025-10-18 05:42:16] -rw-r--r-- 1 boinc boinc      2550 Oct 18 04:29 pandaJob.out
[2025-10-18 05:42:16] -rw------- 1 boinc boinc    976749 Oct 18 04:30 agis_schedconf.cvmfs.json
[2025-10-18 05:42:16] -rw------- 1 boinc boinc   1560740 Oct 18 04:30 agis_ddmendpoints.agis.ALL.json
[2025-10-18 05:42:16] drwx------ 5 boinc boinc      4096 Oct 18 04:30 pilot3
[2025-10-18 05:42:16] -rw------- 1 boinc boinc 193088240 Oct 18 05:40 HITS.46676269._027199.pool.root.1
[2025-10-18 05:42:16] -rw-r--r-- 1 boinc boinc       529 Oct 18 05:40 boinc_task_state.xml
[2025-10-18 05:42:16] -rw------- 1 boinc boinc        95 Oct 18 05:40 pilot_heartbeat.json
[2025-10-18 05:42:16] -rw------- 1 boinc boinc      1029 Oct 18 05:40 memory_monitor_summary.json
[2025-10-18 05:42:16] -rw------- 1 boinc boinc    387741 Oct 18 05:41 log.46676269._027199.job.log.tgz.1
[2025-10-18 05:42:16] -rw------- 1 boinc boinc      7780 Oct 18 05:41 heartbeat.json
[2025-10-18 05:42:16] -rw-r--r-- 1 boinc boinc      8192 Oct 18 05:42 boinc_mmap_file
[2025-10-18 05:42:16] -rw-r--r-- 1 boinc boinc        27 Oct 18 05:42 wrapper_checkpoint.txt
[2025-10-18 05:42:16] -rw------- 1 boinc boinc      4826 Oct 18 05:42 pilotlog.txt
[2025-10-18 05:42:16] -rw------- 1 boinc boinc    629418 Oct 18 05:42 log.46676269._027199.job.log.1
[2025-10-18 05:42:16] -rw------- 1 boinc boinc       357 Oct 18 05:42 output.list
[2025-10-18 05:42:16] -rw-r--r-- 1 boinc boinc       620 Oct 18 05:42 runtime_log
[2025-10-18 05:42:16] -rw------- 1 boinc boinc   1034240 Oct 18 05:42 result.tar.gz
[2025-10-18 05:42:16] -rw------- 1 boinc boinc       640 Oct 18 05:42 wdgMDmh5DR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmcpOMDmOlPCWm.diag
[2025-10-18 05:42:16] -rw-r--r-- 1 boinc boinc      8740 Oct 18 05:42 runtime_log.err
[2025-10-18 05:42:16] -rw-r--r-- 1 boinc boinc     22358 Oct 18 05:42 stderr.txt
[2025-10-18 05:42:16] HITS file was successfully produced:
[2025-10-18 05:42:16] -rw------- 1 boinc boinc 193088240 Oct 18 05:40 shared/HITS.pool.root.1
[2025-10-18 05:42:16]  *** Contents of shared directory: ***
[2025-10-18 05:42:16] total 406776
[2025-10-18 05:42:16] -rw-r--r-- 2 boinc boinc    569674 Oct 18 04:29 input.tar.gz
[2025-10-18 05:42:16] -rw-r--r-- 2 boinc boinc 221813811 Oct 18 04:29 ATLAS.root_0
[2025-10-18 05:42:16] -rw-r--r-- 2 boinc boinc     15120 Oct 18 04:29 start_atlas.sh
[2025-10-18 05:42:16] -rw------- 1 boinc boinc 193088240 Oct 18 05:40 HITS.pool.root.1
[2025-10-18 05:42:16] -rw------- 1 boinc boinc   1034240 Oct 18 05:42 result.tar.gz
05:42:18 (851445): run_atlas exited; CPU time 47514.131933
05:42:18 (851445): called boinc_finish(0)

</stderr_txt>
]]>

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