Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:34:59 (7891): wrapper (7.7.26015): starting
01:34:59 (7891): wrapper: running run_atlas (--nthreads 12)
[2025-10-18 01:34:59] Arguments: --nthreads 12
[2025-10-18 01:34:59] Threads: 12
[2025-10-18 01:34:59] Checking for CVMFS
[2025-10-18 01:34:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 01:34:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 01:34:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 01:35:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 01:35:00] 2.11.2.0 2991 231062 99620 151840 3 57 18194654 20275201 1 130560 1 114575047 99.984 13744617 12666 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 01:35:00] CVMFS is ok
[2025-10-18 01:35:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 01:35:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 01:35:00] Further information can be found at the LHC@home message board.
[2025-10-18 01:35:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 01:35:00] Checking for apptainer binary...
[2025-10-18 01:35:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 01:35:00] Running /usr/bin/apptainer --version
[2025-10-18 01:35:00] apptainer version 1.3.2-1.el7
[2025-10-18 01:35:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 01:35:01] c-205-32.aglt2.org
[2025-10-18 01:35:01] apptainer works
[2025-10-18 01:35:01] Set ATHENA_PROC_NUMBER=12
[2025-10-18 01:35:01] Set ATHENA_CORE_NUMBER=12
[2025-10-18 01:35:01] Starting ATLAS job with PandaID=6848017440
[2025-10-18 01:35:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 02:57:30]  *** The last 200 lines of the pilot log: ***
[2025-10-18 02:57:30]  workdir=None
[2025-10-18 02:57:30] ]
[2025-10-18 02:57:30] 2025-10-18 06:56:31,601 | INFO     | transferring file log.46771637._034615.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6848017440/log.46771637._034615.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-18 02:57:30] 2025-10-18 06:56:31,601 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6848017440/log.46771637._034615.job.log.tgz.1 /tmp/boinchome/slots/0/log.46771637._034615.job
[2025-10-18 02:57:30] 2025-10-18 06:56:31,621 | INFO     | adding to output.list: log.46771637._034615.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/eb/log.46771637._034615.job.log.tg
[2025-10-18 02:57:30] 2025-10-18 06:56:31,622 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 02:57:30] 2025-10-18 06:56:31,622 | INFO     | summary of transferred files:
[2025-10-18 02:57:30] 2025-10-18 06:56:31,622 | INFO     |  -- lfn=log.46771637._034615.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 02:57:30] 2025-10-18 06:56:31,622 | INFO     | stage-out finished correctly
[2025-10-18 02:57:30] 2025-10-18 06:56:31,786 | WARNING  | process 19959 can no longer be monitored (due to stat problems) - aborting
[2025-10-18 02:57:30] 2025-10-18 06:56:31,786 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6848017440/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 02:57:30] 2025-10-18 06:56:31,887 | INFO     | number of running child processes to parent process 19959: 1
[2025-10-18 02:57:30] 2025-10-18 06:56:31,887 | INFO     | maximum number of monitored processes: 6
[2025-10-18 02:57:30] 2025-10-18 06:56:32,951 | INFO     | time since job start (4877s) is within the limit (172800.0s)
[2025-10-18 02:57:30] 2025-10-18 06:56:33,347 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 02:57:30] 2025-10-18 06:56:34,391 | INFO     | monitor loop #364: job 0:6848017440 is in state 'finished'
[2025-10-18 02:57:30] 2025-10-18 06:56:34,391 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 02:57:30] 2025-10-18 06:56:34,957 | INFO     | time since job start (4879s) is within the limit (172800.0s)
[2025-10-18 02:57:30] 2025-10-18 06:56:35,349 | INFO     | job 6848017440 has state=finished
[2025-10-18 02:57:30] 2025-10-18 06:56:35,350 | INFO     | preparing for final server update for job 6848017440 in state='finished'
[2025-10-18 02:57:30] 2025-10-18 06:56:35,350 | INFO     | this job has now completed (state=finished)
[2025-10-18 02:57:30] 2025-10-18 06:56:35,351 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 02:57:30] 2025-10-18 06:56:35,351 | INFO     | log transfer has been attempted: DONE
[2025-10-18 02:57:30] 2025-10-18 06:56:35,351 | INFO     | job 6848017440 has finished - writing final server update
[2025-10-18 02:57:30] 2025-10-18 06:56:35,351 | INFO     | total number of processed events: 400 (read)
[2025-10-18 02:57:30] 2025-10-18 06:56:35,352 | INFO     | executing command: lscpu
[2025-10-18 02:57:30] 2025-10-18 06:56:35,380 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 02:57:30] 2025-10-18 06:56:36,894 | INFO     | monitor loop #365: job 0:6848017440 is in state 'finished'
[2025-10-18 02:57:30] 2025-10-18 06:56:36,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 02:57:30] 2025-10-18 06:56:36,962 | INFO     | time since job start (4881s) is within the limit (172800.0s)
[2025-10-18 02:57:30] 2025-10-18 06:56:38,968 | INFO     | time since job start (4883s) is within the limit (172800.0s)
[2025-10-18 02:57:30] 2025-10-18 06:56:39,397 | INFO     | monitor loop #366: job 0:6848017440 is in state 'finished'
[2025-10-18 02:57:30] 2025-10-18 06:56:39,398 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 02:57:30] 2025-10-18 06:56:39,912 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-18 02:57:30] 2025-10-18 06:56:39,916 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-18 02:57:30] 2025-10-18 06:56:39,918 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6848017440/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 02:57:30] 2025-10-18 06:56:39,919 | INFO     | extracted standard info from prmon json
[2025-10-18 02:57:30] 2025-10-18 06:56:39,919 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 02:57:30] 2025-10-18 06:56:39,919 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 02:57:30] 2025-10-18 06:56:39,919 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 02:57:30] 2025-10-18 06:56:39,919 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 02:57:30] 2025-10-18 06:56:39,921 | INFO     | fitting pss+swap vs Time
[2025-10-18 02:57:30] 2025-10-18 06:56:39,921 | INFO     | sum of square deviations: 120605052.0
[2025-10-18 02:57:30] 2025-10-18 06:56:39,922 | INFO     | sum of deviations: -6815045172.0
[2025-10-18 02:57:30] 2025-10-18 06:56:39,922 | INFO     | mean x: 1760768245.0
[2025-10-18 02:57:30] 2025-10-18 06:56:39,922 | INFO     | mean y: 2770072.0684931506
[2025-10-18 02:57:30] 2025-10-18 06:56:39,922 | INFO     | -- intersect: 99498727563.95004
[2025-10-18 02:57:30] 2025-10-18 06:56:39,922 | INFO     | intersect: 99498727563.95004
[2025-10-18 02:57:30] 2025-10-18 06:56:39,922 | INFO     | chi2: 0.11798303337781516
[2025-10-18 02:57:30] 2025-10-18 06:56:39,922 | INFO     | -- intersect: 99498727563.95004
[2025-10-18 02:57:30] 2025-10-18 06:56:39,923 | INFO     | current memory leak: -56.51 B/s (using 73 data points, chi2=0.12)
[2025-10-18 02:57:30] 2025-10-18 06:56:39,923 | INFO     | could have reported an average CPU frequency of 2050 MHz (6 samples)
[2025-10-18 02:57:30] 2025-10-18 06:56:39,923 | INFO     | ..............................
[2025-10-18 02:57:30] 2025-10-18 06:56:39,923 | INFO     | . Timing measurements:
[2025-10-18 02:57:30] 2025-10-18 06:56:39,923 | INFO     | . get job = 0 s
[2025-10-18 02:57:30] 2025-10-18 06:56:39,923 | INFO     | . initial setup = 2 s
[2025-10-18 02:57:30] 2025-10-18 06:56:39,923 | INFO     | . payload setup = 6 s
[2025-10-18 02:57:30] 2025-10-18 06:56:39,924 | INFO     | . stage-in = 0 s
[2025-10-18 02:57:30] 2025-10-18 06:56:39,924 | INFO     | . payload execution = 4849 s
[2025-10-18 02:57:30] 2025-10-18 06:56:39,924 | INFO     | . stage-out = 0 s
[2025-10-18 02:57:30] 2025-10-18 06:56:39,924 | INFO     | . log creation = 0 s
[2025-10-18 02:57:30] 2025-10-18 06:56:39,924 | INFO     | ..............................
[2025-10-18 02:57:30] 2025-10-18 06:56:40,006 | INFO     | 
[2025-10-18 02:57:30] 2025-10-18 06:56:40,006 | INFO     | job summary report
[2025-10-18 02:57:30] 2025-10-18 06:56:40,006 | INFO     | --------------------------------------------------
[2025-10-18 02:57:30] 2025-10-18 06:56:40,006 | INFO     | PanDA job id: 6848017440
[2025-10-18 02:57:30] 2025-10-18 06:56:40,007 | INFO     | task id: 46771637
[2025-10-18 02:57:30] 2025-10-18 06:56:40,007 | INFO     | errors: (none)
[2025-10-18 02:57:30] 2025-10-18 06:56:40,007 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 02:57:30] 2025-10-18 06:56:40,007 | INFO     | pilot state: finished 
[2025-10-18 02:57:30] 2025-10-18 06:56:40,007 | INFO     | transexitcode: 0
[2025-10-18 02:57:30] 2025-10-18 06:56:40,007 | INFO     | exeerrorcode: 0
[2025-10-18 02:57:30] 2025-10-18 06:56:40,007 | INFO     | exeerrordiag: 
[2025-10-18 02:57:30] 2025-10-18 06:56:40,007 | INFO     | exitcode: 0
[2025-10-18 02:57:30] 2025-10-18 06:56:40,007 | INFO     | exitmsg: OK
[2025-10-18 02:57:30] 2025-10-18 06:56:40,008 | INFO     | cpuconsumptiontime: 52008 s
[2025-10-18 02:57:30] 2025-10-18 06:56:40,008 | INFO     | nevents: 400
[2025-10-18 02:57:30] 2025-10-18 06:56:40,008 | INFO     | neventsw: 0
[2025-10-18 02:57:30] 2025-10-18 06:56:40,008 | INFO     | pid: 19959
[2025-10-18 02:57:30] 2025-10-18 06:56:40,008 | INFO     | pgrp: 19959
[2025-10-18 02:57:30] 2025-10-18 06:56:40,008 | INFO     | corecount: 12
[2025-10-18 02:57:30] 2025-10-18 06:56:40,008 | INFO     | event service: False
[2025-10-18 02:57:30] 2025-10-18 06:56:40,008 | INFO     | sizes: {0: 2348758, 1: 2348957, 5: 2349219, 11: 2349275, 4859: 2375492, 4860: 2384490, 4862: 2384674, 4868: 2384868}
[2025-10-18 02:57:30] 2025-10-18 06:56:40,009 | INFO     | --------------------------------------------------
[2025-10-18 02:57:30] 2025-10-18 06:56:40,009 | INFO     | 
[2025-10-18 02:57:30] 2025-10-18 06:56:40,009 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 02:57:30] 2025-10-18 06:56:40,030 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,030 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,030 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,030 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,031 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,031 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,031 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,031 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,031 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,032 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,032 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,032 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,032 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,032 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,032 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,032 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,033 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,033 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 02:57:30] 2025-10-18 06:56:40,033 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,033 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 02:57:30] 2025-10-18 06:56:40,033 | INFO     | job 6848017440 has completed (purged errors)
[2025-10-18 02:57:30] 2025-10-18 06:56:40,034 | INFO     | overall cleanup function is called
[2025-10-18 02:57:30] 2025-10-18 06:56:40,133 | INFO     | PID=12713 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 02:57:30] 2025-10-18 06:56:41,042 | INFO     | --- collectZombieJob: --- 10, [19959]
[2025-10-18 02:57:30] 2025-10-18 06:56:41,042 | INFO     | zombie collector waiting for pid 19959
[2025-10-18 02:57:30] 2025-10-18 06:56:41,042 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 02:57:30] 2025-10-18 06:56:41,042 | INFO     | collected zombie processes
[2025-10-18 02:57:30] 2025-10-18 06:56:41,043 | INFO     | will attempt to kill all subprocesses of pid=19959
[2025-10-18 02:57:30] 2025-10-18 06:56:41,134 | INFO     | process IDs to be killed: [19959] (in reverse order)
[2025-10-18 02:57:30] 2025-10-18 06:56:41,217 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 02:57:30] 2025-10-18 06:56:41,217 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 02:57:30] 2025-10-18 06:56:41,220 | INFO     | did not find any defunct processes belonging to 19959
[2025-10-18 02:57:30] 2025-10-18 06:56:41,224 | INFO     | did not find any defunct processes belonging to 19959
[2025-10-18 02:57:30] 2025-10-18 06:56:41,224 | INFO     | ready for new job
[2025-10-18 02:57:30] 2025-10-18 06:56:41,224 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 02:57:30] 2025-10-18 06:56:41,226 | INFO     | ***************************************
[2025-10-18 02:57:30] 2025-10-18 06:56:41,226 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 02:57:30] 2025-10-18 06:56:41,226 | INFO     | ***************************************
[2025-10-18 02:57:30] 2025-10-18 06:56:41,226 | INFO     | 
[2025-10-18 02:57:30] 2025-10-18 06:56:41,227 | INFO     | architecture information:
[2025-10-18 02:57:30] 2025-10-18 06:56:41,228 | INFO     | executing command: cat /etc/os-release
[2025-10-18 02:57:30] 2025-10-18 06:56:41,242 | INFO     | cat /etc/os-release:
[2025-10-18 02:57:30] NAME="CentOS Linux"
[2025-10-18 02:57:30] VERSION="7 (Core)"
[2025-10-18 02:57:30] ID="centos"
[2025-10-18 02:57:30] ID_LIKE="rhel fedora"
[2025-10-18 02:57:30] VERSION_ID="7"
[2025-10-18 02:57:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 02:57:30] ANSI_COLOR="0;31"
[2025-10-18 02:57:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 02:57:30] HOME_URL="https://www.centos.org/"
[2025-10-18 02:57:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 02:57:30] 
[2025-10-18 02:57:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 02:57:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 02:57:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 02:57:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 02:57:30] 
[2025-10-18 02:57:30] 2025-10-18 06:56:41,242 | INFO     | ***************************************
[2025-10-18 02:57:30] 2025-10-18 06:56:41,745 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 02:57:30] 2025-10-18 06:56:41,762 | INFO     | sufficient remaining disk space (29338107904 B)
[2025-10-18 02:57:30] 2025-10-18 06:56:41,763 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 02:57:30] 2025-10-18 06:56:41,763 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 02:57:30] 2025-10-18 06:56:41,763 | INFO     | update_server=False
[2025-10-18 02:57:30] 2025-10-18 06:56:41,763 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 02:57:30] 2025-10-18 06:56:41,763 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 02:57:30] 2025-10-18 06:56:41,901 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-18 02:57:30] 2025-10-18 06:56:41,901 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-18 02:57:30] 2025-10-18 06:56:41,901 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 02:57:30] 2025-10-18 06:56:41,901 | INFO     | will abort loop
[2025-10-18 02:57:30] 2025-10-18 06:56:42,056 | INFO     | all data control threads have been joined
[2025-10-18 02:57:30] 2025-10-18 06:56:42,222 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 02:57:30] 2025-10-18 06:56:42,517 | INFO     | all payload control threads have been joined
[2025-10-18 02:57:30] 2025-10-18 06:56:42,765 | INFO     | [job] retrieve thread has finished
[2025-10-18 02:57:30] 2025-10-18 06:56:42,769 | INFO     | [job] queue monitor thread has finished
[2025-10-18 02:57:30] 2025-10-18 06:56:42,907 | INFO     | [job] job monitor thread has finished
[2025-10-18 02:57:30] 2025-10-18 06:56:42,921 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 02:57:30] 2025-10-18 06:56:42,952 | INFO     | [data] copytool_in thread has finished
[2025-10-18 02:57:30] 2025-10-18 06:56:42,965 | INFO     | all job control threads have been joined
[2025-10-18 02:57:30] 2025-10-18 06:56:43,009 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 02:57:30] 2025-10-18 06:56:43,061 | INFO     | [data] control thread has finished
[2025-10-18 02:57:30] 2025-10-18 06:56:43,085 | INFO     | [payload] validate_post thread has finished
[2025-10-18 02:57:30] 2025-10-18 06:56:43,523 | INFO     | [payload] control thread has finished
[2025-10-18 02:57:30] 2025-10-18 06:56:43,804 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 02:57:30] 2025-10-18 06:56:43,860 | INFO     | [job] validate thread has finished
[2025-10-18 02:57:30] 2025-10-18 06:56:43,942 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 02:57:30] 2025-10-18 06:56:43,966 | INFO     | [job] control thread has finished
[2025-10-18 02:57:30] 2025-10-18 06:56:43,982 | INFO     | [payload] failed_post thread has finished
[2025-10-18 02:57:30] 2025-10-18 06:56:44,227 | INFO     | [data] copytool_out thread has finished
[2025-10-18 02:57:30] 2025-10-18 06:56:47,944 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 02:57:30] 2025-10-18 06:56:52,798 | INFO     | job.realtimelogging is not enabled
[2025-10-18 02:57:30] 2025-10-18 06:56:53,803 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 02:57:30] 2025-10-18 06:57:12,334 | INFO     | PID=12713 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-18 02:57:30] 2025-10-18 06:57:12,334 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 02:57:30] 2025-10-18 06:57:12,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 02:57:30] 2025-10-18 06:57:12,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 02:57:30] 2025-10-18 06:57:23,038 | INFO     | [monitor] cgroup control has ended
[2025-10-18 02:57:30] 2025-10-18 06:57:25,052 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816813635392)>', '<ExcThread(monitor, started 139816511448832)>']
[2025-10-18 02:57:30] 2025-10-18 06:57:25,396 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 02:57:30] 2025-10-18 06:57:25,396 | INFO     | [monitor] control thread has ended
[2025-10-18 02:57:30] 2025-10-18 06:57:30,062 | INFO     | all workflow threads have been joined
[2025-10-18 02:57:30] 2025-10-18 06:57:30,062 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 02:57:30] 2025-10-18 06:57:30,062 | INFO     | traces error code: 0
[2025-10-18 02:57:30] 2025-10-18 06:57:30,063 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 02:57:30] 2025-10-18 06:57:30,150 [wrapper] ==== pilot stdout END ====
[2025-10-18 02:57:30] 2025-10-18 06:57:30,153 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 02:57:30] 2025-10-18 06:57:30,158 [wrapper] pilotpid: 12713
[2025-10-18 02:57:30] 2025-10-18 06:57:30,161 [wrapper] Pilot exit status: 0
[2025-10-18 02:57:30] 2025-10-18 06:57:30,176 [wrapper] pandaids: 6848017440
[2025-10-18 02:57:30] 2025-10-18 06:57:30,221 [wrapper] cleanup supervisor_pilot  5198 12714
[2025-10-18 02:57:30] 2025-10-18 06:57:30,225 [wrapper] Test setup, not cleaning
[2025-10-18 02:57:30] 2025-10-18 06:57:30,229 [wrapper] apfmon messages muted
[2025-10-18 02:57:30] 2025-10-18 06:57:30,233 [wrapper] ==== wrapper stdout END ====
[2025-10-18 02:57:30] 2025-10-18 06:57:30,237 [wrapper] ==== wrapper stderr END ====
[2025-10-18 02:57:30]  *** Error codes and diagnostics ***
[2025-10-18 02:57:30]     "exeErrorCode": 0,
[2025-10-18 02:57:30]     "exeErrorDiag": "",
[2025-10-18 02:57:30]     "pilotErrorCode": 0,
[2025-10-18 02:57:30]     "pilotErrorDiag": "",
[2025-10-18 02:57:30]  *** Listing of results directory ***
[2025-10-18 02:57:30] total 430096
[2025-10-18 02:57:30] -rw-r--r-- 1 boincer umatlas      5112 Oct 17 20:19 queuedata.json
[2025-10-18 02:57:30] -rw-r--r-- 1 boincer umatlas    557409 Oct 17 20:19 pilot3.tar.gz
[2025-10-18 02:57:30] -rwx------ 1 boincer umatlas     36292 Oct 17 20:20 runpilot2-wrapper.sh
[2025-10-18 02:57:30] -rw-r--r-- 1 boincer umatlas       100 Oct 18 01:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 02:57:30] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 01:34 run_atlas
[2025-10-18 02:57:30] -rw-r--r-- 1 boincer umatlas       105 Oct 18 01:34 job.xml
[2025-10-18 02:57:30] -rw-r--r-- 2 boincer umatlas 225840586 Oct 18 01:34 EVNT.46771634._001533.pool.root.1
[2025-10-18 02:57:30] drwxrwx--x 2 boincer umatlas      4096 Oct 18 01:34 shared
[2025-10-18 02:57:30] -rw-r--r-- 2 boincer umatlas    569678 Oct 18 01:34 input.tar.gz
[2025-10-18 02:57:30] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 01:34 start_atlas.sh
[2025-10-18 02:57:30] -rw-r--r-- 1 boincer umatlas         0 Oct 18 01:34 boinc_lockfile
[2025-10-18 02:57:30] -rw-r--r-- 1 boincer umatlas      2558 Oct 18 01:35 pandaJob.out
[2025-10-18 02:57:30] -rw------- 1 boincer umatlas    976749 Oct 18 01:35 agis_schedconf.cvmfs.json
[2025-10-18 02:57:30] -rw------- 1 boincer umatlas   1560740 Oct 18 01:35 agis_ddmendpoints.agis.ALL.json
[2025-10-18 02:57:30] drwx------ 5 boincer umatlas      4096 Oct 18 01:35 pilot3
[2025-10-18 02:57:30] -rw-r--r-- 1 boincer umatlas      5953 Oct 18 02:46 init_data.xml
[2025-10-18 02:57:30] -rw------- 1 boincer umatlas 208501765 Oct 18 02:56 HITS.46771637._034615.pool.root.1
[2025-10-18 02:57:30] -rw------- 1 boincer umatlas        95 Oct 18 02:56 pilot_heartbeat.json
[2025-10-18 02:57:30] -rw-r--r-- 1 boincer umatlas       529 Oct 18 02:56 boinc_task_state.xml
[2025-10-18 02:57:30] -rw------- 1 boincer umatlas      1062 Oct 18 02:56 memory_monitor_summary.json
[2025-10-18 02:57:30] -rw------- 1 boincer umatlas    379043 Oct 18 02:56 log.46771637._034615.job.log.tgz.1
[2025-10-18 02:57:30] -rw------- 1 boincer umatlas      7854 Oct 18 02:56 heartbeat.json
[2025-10-18 02:57:30] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 02:57 boinc_mmap_file
[2025-10-18 02:57:30] -rw------- 1 boincer umatlas      5004 Oct 18 02:57 pilotlog.txt
[2025-10-18 02:57:30] -rw------- 1 boincer umatlas    705451 Oct 18 02:57 log.46771637._034615.job.log.1
[2025-10-18 02:57:30] -rw-r--r-- 1 boincer umatlas        27 Oct 18 02:57 wrapper_checkpoint.txt
[2025-10-18 02:57:30] -rw------- 1 boincer umatlas       357 Oct 18 02:57 output.list
[2025-10-18 02:57:30] -rw-r--r-- 1 boincer umatlas       620 Oct 18 02:57 runtime_log
[2025-10-18 02:57:30] -rw------- 1 boincer umatlas   1105920 Oct 18 02:57 result.tar.gz
[2025-10-18 02:57:30] -rw------- 1 boincer umatlas       659 Oct 18 02:57 xaQNDmOr9T8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAVvNDmTrNGMo.diag
[2025-10-18 02:57:30] -rw-r--r-- 1 boincer umatlas      8705 Oct 18 02:57 runtime_log.err
[2025-10-18 02:57:30] -rw-r--r-- 1 boincer umatlas     22359 Oct 18 02:57 stderr.txt
[2025-10-18 02:57:30] HITS file was successfully produced:
[2025-10-18 02:57:30] -rw------- 1 boincer umatlas 208501765 Oct 18 02:56 shared/HITS.pool.root.1
[2025-10-18 02:57:30]  *** Contents of shared directory: ***
[2025-10-18 02:57:30] total 425828
[2025-10-18 02:57:30] -rw-r--r-- 2 boincer umatlas 225840586 Oct 18 01:34 ATLAS.root_0
[2025-10-18 02:57:30] -rw-r--r-- 2 boincer umatlas    569678 Oct 18 01:34 input.tar.gz
[2025-10-18 02:57:30] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 01:34 start_atlas.sh
[2025-10-18 02:57:30] -rw------- 1 boincer umatlas 208501765 Oct 18 02:56 HITS.pool.root.1
[2025-10-18 02:57:30] -rw------- 1 boincer umatlas   1105920 Oct 18 02:57 result.tar.gz
02:57:32 (7891): run_atlas exited; CPU time 51987.393740
02:57:32 (7891): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN