Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:39:09 (1590542): wrapper (7.7.26015): starting
17:39:09 (1590542): wrapper: running run_atlas (--nthreads 4)
[2025-10-18 17:39:09] Arguments: --nthreads 4
[2025-10-18 17:39:09] Threads: 4
[2025-10-18 17:39:09] Checking for CVMFS
[2025-10-18 17:39:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 17:39:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 17:39:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 17:39:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 17:39:09] 2.9.2.0 85452 3683 98840 151857 2 57 23320341 36864000 0 130560 0 3966964 99.993 135994 2629 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-18 17:39:09] CVMFS is ok
[2025-10-18 17:39:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 17:39:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 17:39:09] Further information can be found at the LHC@home message board.
[2025-10-18 17:39:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 17:39:09] Checking for apptainer binary...
[2025-10-18 17:39:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 17:39:09] Running /usr/bin/apptainer --version
[2025-10-18 17:39:09] apptainer version 1.4.1-1.1
[2025-10-18 17:39:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 17:39:09] thA373a
[2025-10-18 17:39:09] apptainer works
[2025-10-18 17:39:09] Set ATHENA_PROC_NUMBER=4
[2025-10-18 17:39:09] Set ATHENA_CORE_NUMBER=4
[2025-10-18 17:39:09] Starting ATLAS job with PandaID=6848017629
[2025-10-18 17:39:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 18:59:27]  *** The last 200 lines of the pilot log: ***
[2025-10-18 18:59:27] 2025-10-18 16:58:22,631 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 18:59:27] 2025-10-18 16:58:22,631 | INFO     | update_server=False
[2025-10-18 18:59:27] 2025-10-18 16:58:22,631 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 18:59:27] 2025-10-18 16:58:22,631 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 18:59:27] 2025-10-18 16:58:22,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 18:59:27] 2025-10-18 16:58:22,631 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 18:59:27] 2025-10-18 16:58:22,631 | INFO     | aborting loop
[2025-10-18 18:59:27] 2025-10-18 16:58:22,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 18:59:27] 2025-10-18 16:58:22,757 | INFO     | all data control threads have been joined
[2025-10-18 18:59:27] 2025-10-18 16:58:23,159 | INFO     | all payload control threads have been joined
[2025-10-18 18:59:27] 2025-10-18 16:58:23,636 | INFO     | [job] retrieve thread has finished
[2025-10-18 18:59:27] 2025-10-18 16:58:23,637 | INFO     | [job] job monitor thread has finished
[2025-10-18 18:59:27] 2025-10-18 16:58:23,637 | INFO     | [job] queue monitor thread has finished
[2025-10-18 18:59:27] 2025-10-18 16:58:23,762 | INFO     | [data] control thread has finished
[2025-10-18 18:59:27] 2025-10-18 16:58:23,840 | INFO     | [data] copytool_in thread has finished
[2025-10-18 18:59:27] 2025-10-18 16:58:23,891 | INFO     | all job control threads have been joined
[2025-10-18 18:59:27] 2025-10-18 16:58:24,164 | INFO     | [payload] control thread has finished
[2025-10-18 18:59:27] 2025-10-18 16:58:24,314 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 18:59:27] 2025-10-18 16:58:24,408 | INFO     | [payload] failed_post thread has finished
[2025-10-18 18:59:27] 2025-10-18 16:58:24,637 | INFO     | [data] copytool_out thread has finished
[2025-10-18 18:59:27] 2025-10-18 16:58:24,815 | INFO     | [job] validate thread has finished
[2025-10-18 18:59:27] 2025-10-18 16:58:24,896 | INFO     | [job] control thread has finished
[2025-10-18 18:59:27] 2025-10-18 16:58:24,973 | INFO     | [payload] validate_post thread has finished
[2025-10-18 18:59:27] 2025-10-18 16:58:24,979 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 18:59:27] 2025-10-18 16:58:25,048 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 18:59:27] 2025-10-18 16:58:26,636 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 18:59:27] 2025-10-18 16:58:33,429 | INFO     | job.realtimelogging is not enabled
[2025-10-18 18:59:27] 2025-10-18 16:58:34,434 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 18:59:27] 2025-10-18 16:58:52,844 | INFO     | PID=1594338 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 18:59:27] 2025-10-18 16:58:52,844 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 18:59:27] 2025-10-18 16:58:52,844 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 18:59:27] 2025-10-18 16:58:52,844 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 18:59:27] 2025-10-18 16:59:22,324 | INFO     | [monitor] cgroup control has ended
[2025-10-18 18:59:27] 2025-10-18 16:59:22,456 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139878355220288)>', '<ExcThread(monitor, started 139877404366592)>']
[2025-10-18 18:59:27] 2025-10-18 16:59:22,989 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 18:59:27] 2025-10-18 16:59:22,989 | INFO     | [monitor] control thread has ended
[2025-10-18 18:59:27] 2025-10-18 16:59:27,482 | INFO     | all workflow threads have been joined
[2025-10-18 18:59:27] 2025-10-18 16:59:27,482 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 18:59:27] 2025-10-18 16:59:27,483 | INFO     | traces error code: 0
[2025-10-18 18:59:27] 2025-10-18 16:59:27,483 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 18:59:27] 2025-10-18 16:59:27,563 [wrapper] ==== pilot stdout END ====
[2025-10-18 18:59:27] 2025-10-18 16:59:27,567 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 18:59:27] 2025-10-18 16:59:27,571 [wrapper] pilotpid: 1594338
[2025-10-18 18:59:27] 2025-10-18 16:59:27,575 [wrapper] Pilot exit status: 0
[2025-10-18 18:59:27] 2025-10-18 16:59:27,587 [wrapper] pandaids: 6848017629
[2025-10-18 18:59:27] 2025-10-18 16:59:27,609 [wrapper] cleanup supervisor_pilot 1614342 1594339
[2025-10-18 18:59:27] 2025-10-18 16:59:27,613 [wrapper] Test setup, not cleaning
[2025-10-18 18:59:27] 2025-10-18 16:59:27,616 [wrapper] apfmon messages muted
[2025-10-18 18:59:27] 2025-10-18 16:59:27,620 [wrapper] ==== wrapper stdout END ====
[2025-10-18 18:59:27] 2025-10-18 16:59:27,624 [wrapper] ==== wrapper stderr END ====
[2025-10-18 18:59:27]  *** Error codes and diagnostics ***
[2025-10-18 18:59:27]     "exeErrorCode": 0,
[2025-10-18 18:59:27]     "exeErrorDiag": "",
[2025-10-18 18:59:27]     "pilotErrorCode": 0,
[2025-10-18 18:59:27]     "pilotErrorDiag": "",
[2025-10-18 18:59:27]  *** Listing of results directory ***
[2025-10-18 18:59:27] total 435572
[2025-10-18 18:59:27] -rw-r--r-- 1 boinc boinc    557409 Oct 18 02:19 pilot3.tar.gz
[2025-10-18 18:59:27] -rw-r--r-- 1 boinc boinc      5112 Oct 18 02:24 queuedata.json
[2025-10-18 18:59:27] -rwx------ 1 boinc boinc     36292 Oct 18 02:25 runpilot2-wrapper.sh
[2025-10-18 18:59:27] -rw-r--r-- 1 boinc boinc       100 Oct 18 17:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 18:59:27] -rwxr-xr-x 1 boinc boinc      7986 Oct 18 17:39 run_atlas
[2025-10-18 18:59:27] -rw-r--r-- 1 boinc boinc       105 Oct 18 17:39 job.xml
[2025-10-18 18:59:27] -rw-r--r-- 2 boinc boinc 231998179 Oct 18 17:39 EVNT.46771634._001540.pool.root.1
[2025-10-18 18:59:27] -rw-r--r-- 2 boinc boinc    569675 Oct 18 17:39 input.tar.gz
[2025-10-18 18:59:27] -rw-r--r-- 2 boinc boinc     15120 Oct 18 17:39 start_atlas.sh
[2025-10-18 18:59:27] drwxrwx--x 2 boinc boinc      4096 Oct 18 17:39 shared
[2025-10-18 18:59:27] -rw-r--r-- 1 boinc boinc         0 Oct 18 17:39 boinc_setup_complete
[2025-10-18 18:59:27] -rw-r--r-- 1 boinc boinc      6376 Oct 18 17:39 init_data.xml
[2025-10-18 18:59:27] -rw-r--r-- 1 boinc boinc         0 Oct 18 17:39 boinc_lockfile
[2025-10-18 18:59:27] -rw-r--r-- 1 boinc boinc      2558 Oct 18 17:39 pandaJob.out
[2025-10-18 18:59:27] -rw------- 1 boinc boinc    976750 Oct 18 17:39 agis_schedconf.cvmfs.json
[2025-10-18 18:59:27] -rw------- 1 boinc boinc   1560740 Oct 18 17:39 agis_ddmendpoints.agis.ALL.json
[2025-10-18 18:59:27] drwx------ 5 boinc boinc      4096 Oct 18 17:39 pilot3
[2025-10-18 18:59:27] -rw------- 1 boinc boinc 208208982 Oct 18 18:57 HITS.46771637._034773.pool.root.1
[2025-10-18 18:59:27] -rw-r--r-- 1 boinc boinc       529 Oct 18 18:58 boinc_task_state.xml
[2025-10-18 18:59:27] -rw------- 1 boinc boinc      1036 Oct 18 18:58 memory_monitor_summary.json
[2025-10-18 18:59:27] -rw------- 1 boinc boinc    264062 Oct 18 18:58 log.46771637._034773.job.log.tgz.1
[2025-10-18 18:59:27] -rw------- 1 boinc boinc      7771 Oct 18 18:58 heartbeat.json
[2025-10-18 18:59:27] -rw------- 1 boinc boinc        95 Oct 18 18:58 pilot_heartbeat.json
[2025-10-18 18:59:27] -rw-r--r-- 1 boinc boinc        27 Oct 18 18:59 wrapper_checkpoint.txt
[2025-10-18 18:59:27] -rw-r--r-- 1 boinc boinc      8192 Oct 18 18:59 boinc_mmap_file
[2025-10-18 18:59:27] -rw------- 1 boinc boinc      4824 Oct 18 18:59 pilotlog.txt
[2025-10-18 18:59:27] -rw------- 1 boinc boinc    699519 Oct 18 18:59 log.46771637._034773.job.log.1
[2025-10-18 18:59:27] -rw------- 1 boinc boinc       357 Oct 18 18:59 output.list
[2025-10-18 18:59:27] -rw-r--r-- 1 boinc boinc       620 Oct 18 18:59 runtime_log
[2025-10-18 18:59:27] -rw------- 1 boinc boinc    983040 Oct 18 18:59 result.tar.gz
[2025-10-18 18:59:27] -rw-r--r-- 1 boinc boinc      8782 Oct 18 18:59 runtime_log.err
[2025-10-18 18:59:27] -rw------- 1 boinc boinc       659 Oct 18 18:59 F5IMDm4v9T8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKWvNDmEDdJpm.diag
[2025-10-18 18:59:27] -rw-r--r-- 1 boinc boinc      7611 Oct 18 18:59 stderr.txt
[2025-10-18 18:59:27] HITS file was successfully produced:
[2025-10-18 18:59:27] -rw------- 1 boinc boinc 208208982 Oct 18 18:57 shared/HITS.pool.root.1
[2025-10-18 18:59:27]  *** Contents of shared directory: ***
[2025-10-18 18:59:27] total 431440
[2025-10-18 18:59:27] -rw-r--r-- 2 boinc boinc 231998179 Oct 18 17:39 ATLAS.root_0
[2025-10-18 18:59:27] -rw-r--r-- 2 boinc boinc    569675 Oct 18 17:39 input.tar.gz
[2025-10-18 18:59:27] -rw-r--r-- 2 boinc boinc     15120 Oct 18 17:39 start_atlas.sh
[2025-10-18 18:59:27] -rw------- 1 boinc boinc 208208982 Oct 18 18:57 HITS.pool.root.1
[2025-10-18 18:59:27] -rw------- 1 boinc boinc    983040 Oct 18 18:59 result.tar.gz
18:59:28 (1590542): run_atlas exited; CPU time 17818.813828
18:59:28 (1590542): called boinc_finish(0)

</stderr_txt>
]]>

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