Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:29:34 (1999644): wrapper (7.7.26015): starting
18:29:34 (1999644): wrapper: running run_atlas (--nthreads 4)
[2025-10-18 18:29:34] Arguments: --nthreads 4
[2025-10-18 18:29:34] Threads: 4
[2025-10-18 18:29:34] Checking for CVMFS
[2025-10-18 18:29:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 18:29:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 18:29:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 18:29:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 18:29:34] 2.9.2.0 279843 3597 91468 151858 3 57 35363306 36864000 0 130560 0 3017519 99.987 160042 2091 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-18 18:29:34] CVMFS is ok
[2025-10-18 18:29:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 18:29:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 18:29:34] Further information can be found at the LHC@home message board.
[2025-10-18 18:29:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 18:29:34] Checking for apptainer binary...
[2025-10-18 18:29:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 18:29:34] Running /usr/bin/apptainer --version
[2025-10-18 18:29:34] apptainer version 1.4.1-1.1
[2025-10-18 18:29:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 18:29:35] atlasA237
[2025-10-18 18:29:35] apptainer works
[2025-10-18 18:29:35] Set ATHENA_PROC_NUMBER=4
[2025-10-18 18:29:35] Set ATHENA_CORE_NUMBER=4
[2025-10-18 18:29:35] Starting ATLAS job with PandaID=6848012816
[2025-10-18 18:29:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 19:47:54]  *** The last 200 lines of the pilot log: ***
[2025-10-18 19:47:54] 
[2025-10-18 19:47:54] 2025-10-18 17:46:59,072 | INFO     | ***************************************
[2025-10-18 19:47:54] 2025-10-18 17:46:59,574 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-18 19:47:54] 2025-10-18 17:46:59,590 | INFO     | sufficient remaining disk space (323863183360 B)
[2025-10-18 19:47:54] 2025-10-18 17:46:59,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 19:47:54] 2025-10-18 17:46:59,590 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 19:47:54] 2025-10-18 17:46:59,590 | INFO     | update_server=False
[2025-10-18 19:47:54] 2025-10-18 17:46:59,590 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 19:47:54] 2025-10-18 17:46:59,591 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 19:47:54] 2025-10-18 17:46:59,591 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 19:47:54] 2025-10-18 17:46:59,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 19:47:54] 2025-10-18 17:46:59,880 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 19:47:54] 2025-10-18 17:46:59,880 | INFO     | aborting loop
[2025-10-18 19:47:54] 2025-10-18 17:46:59,905 | INFO     | all data control threads have been joined
[2025-10-18 19:47:54] 2025-10-18 17:47:00,592 | INFO     | all job control threads have been joined
[2025-10-18 19:47:54] 2025-10-18 17:47:00,596 | INFO     | [job] retrieve thread has finished
[2025-10-18 19:47:54] 2025-10-18 17:47:00,596 | INFO     | [job] queue monitor thread has finished
[2025-10-18 19:47:54] 2025-10-18 17:47:00,663 | INFO     | all payload control threads have been joined
[2025-10-18 19:47:54] 2025-10-18 17:47:00,760 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 19:47:54] 2025-10-18 17:47:00,886 | INFO     | [job] job monitor thread has finished
[2025-10-18 19:47:54] 2025-10-18 17:47:00,911 | INFO     | [data] control thread has finished
[2025-10-18 19:47:54] 2025-10-18 17:47:01,306 | INFO     | [job] validate thread has finished
[2025-10-18 19:47:54] 2025-10-18 17:47:01,326 | INFO     | [payload] validate_post thread has finished
[2025-10-18 19:47:54] 2025-10-18 17:47:01,493 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 19:47:54] 2025-10-18 17:47:01,500 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 19:47:54] 2025-10-18 17:47:01,594 | INFO     | [job] control thread has finished
[2025-10-18 19:47:54] 2025-10-18 17:47:01,596 | INFO     | [data] copytool_out thread has finished
[2025-10-18 19:47:54] 2025-10-18 17:47:01,621 | INFO     | [payload] failed_post thread has finished
[2025-10-18 19:47:54] 2025-10-18 17:47:01,629 | INFO     | [data] copytool_in thread has finished
[2025-10-18 19:47:54] 2025-10-18 17:47:01,669 | INFO     | [payload] control thread has finished
[2025-10-18 19:47:54] 2025-10-18 17:47:02,083 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 19:47:54] 2025-10-18 17:47:03,596 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 19:47:54] 2025-10-18 17:47:29,863 | INFO     | PID=2003466 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 19:47:54] 2025-10-18 17:47:29,863 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 19:47:54] 2025-10-18 17:47:29,863 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 19:47:54] 2025-10-18 17:47:29,863 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 19:47:54] 2025-10-18 17:47:48,011 | INFO     | [monitor] cgroup control has ended
[2025-10-18 19:47:54] 2025-10-18 17:47:49,530 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139961490503488)>', '<ExcThread(monitor, started 139960569034496)>']
[2025-10-18 19:47:54] 2025-10-18 17:47:49,958 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 19:47:54] 2025-10-18 17:47:49,958 | INFO     | [monitor] control thread has ended
[2025-10-18 19:47:54] 2025-10-18 17:47:54,544 | INFO     | all workflow threads have been joined
[2025-10-18 19:47:54] 2025-10-18 17:47:54,545 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 19:47:54] 2025-10-18 17:47:54,545 | INFO     | traces error code: 0
[2025-10-18 19:47:54] 2025-10-18 17:47:54,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 19:47:54] 2025-10-18 17:47:54,615 [wrapper] ==== pilot stdout END ====
[2025-10-18 19:47:54] 2025-10-18 17:47:54,619 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 19:47:54] 2025-10-18 17:47:54,622 [wrapper] pilotpid: 2003466
[2025-10-18 19:47:54] 2025-10-18 17:47:54,626 [wrapper] Pilot exit status: 0
[2025-10-18 19:47:54] 2025-10-18 17:47:54,636 [wrapper] pandaids: 6848012816
[2025-10-18 19:47:54] 2025-10-18 17:47:54,664 [wrapper] cleanup supervisor_pilot 2031498 2003467
[2025-10-18 19:47:54] 2025-10-18 17:47:54,667 [wrapper] Test setup, not cleaning
[2025-10-18 19:47:54] 2025-10-18 17:47:54,670 [wrapper] apfmon messages muted
[2025-10-18 19:47:54] 2025-10-18 17:47:54,674 [wrapper] ==== wrapper stdout END ====
[2025-10-18 19:47:54] 2025-10-18 17:47:54,677 [wrapper] ==== wrapper stderr END ====
[2025-10-18 19:47:54]  *** Error codes and diagnostics ***
[2025-10-18 19:47:54]     "exeErrorCode": 0,
[2025-10-18 19:47:54]     "exeErrorDiag": "",
[2025-10-18 19:47:54]     "pilotErrorCode": 0,
[2025-10-18 19:47:54]     "pilotErrorDiag": "",
[2025-10-18 19:47:54]  *** Listing of results directory ***
[2025-10-18 19:47:54] total 427324
[2025-10-18 19:47:54] -rw-r--r-- 1 boinc boinc    557409 Oct 17 22:59 pilot3.tar.gz
[2025-10-18 19:47:54] -rw-r--r-- 1 boinc boinc      5112 Oct 17 23:37 queuedata.json
[2025-10-18 19:47:54] -rwx------ 1 boinc boinc     36292 Oct 17 23:37 runpilot2-wrapper.sh
[2025-10-18 19:47:54] -rw-r--r-- 1 boinc boinc       100 Oct 18 18:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 19:47:54] -rwxr-xr-x 1 boinc boinc      7986 Oct 18 18:29 run_atlas
[2025-10-18 19:47:54] -rw-r--r-- 1 boinc boinc       105 Oct 18 18:29 job.xml
[2025-10-18 19:47:54] -rw-r--r-- 2 boinc boinc 226112190 Oct 18 18:29 EVNT.46771634._001414.pool.root.1
[2025-10-18 19:47:54] -rw-r--r-- 2 boinc boinc    569680 Oct 18 18:29 input.tar.gz
[2025-10-18 19:47:54] -rw-r--r-- 2 boinc boinc     15120 Oct 18 18:29 start_atlas.sh
[2025-10-18 19:47:54] drwxrwx--x 2 boinc boinc      4096 Oct 18 18:29 shared
[2025-10-18 19:47:54] -rw-r--r-- 1 boinc boinc         0 Oct 18 18:29 boinc_setup_complete
[2025-10-18 19:47:54] -rw-r--r-- 1 boinc boinc      6370 Oct 18 18:29 init_data.xml
[2025-10-18 19:47:54] -rw-r--r-- 1 boinc boinc         0 Oct 18 18:29 boinc_lockfile
[2025-10-18 19:47:54] -rw-r--r-- 1 boinc boinc      2555 Oct 18 18:29 pandaJob.out
[2025-10-18 19:47:54] -rw------- 1 boinc boinc    976750 Oct 18 18:29 agis_schedconf.cvmfs.json
[2025-10-18 19:47:54] -rw------- 1 boinc boinc   1560740 Oct 18 18:29 agis_ddmendpoints.agis.ALL.json
[2025-10-18 19:47:54] drwx------ 5 boinc boinc      4096 Oct 18 18:29 pilot3
[2025-10-18 19:47:54] -rw------- 1 boinc boinc 205709604 Oct 18 19:46 HITS.46771637._032256.pool.root.1
[2025-10-18 19:47:54] -rw-r--r-- 1 boinc boinc       529 Oct 18 19:46 boinc_task_state.xml
[2025-10-18 19:47:54] -rw------- 1 boinc boinc      1023 Oct 18 19:46 memory_monitor_summary.json
[2025-10-18 19:47:54] -rw------- 1 boinc boinc    249499 Oct 18 19:46 log.46771637._032256.job.log.tgz.1
[2025-10-18 19:47:54] -rw------- 1 boinc boinc      7771 Oct 18 19:46 heartbeat.json
[2025-10-18 19:47:54] -rw------- 1 boinc boinc        95 Oct 18 19:47 pilot_heartbeat.json
[2025-10-18 19:47:54] -rw-r--r-- 1 boinc boinc      8192 Oct 18 19:47 boinc_mmap_file
[2025-10-18 19:47:54] -rw-r--r-- 1 boinc boinc        27 Oct 18 19:47 wrapper_checkpoint.txt
[2025-10-18 19:47:54] -rw------- 1 boinc boinc      4752 Oct 18 19:47 pilotlog.txt
[2025-10-18 19:47:54] -rw------- 1 boinc boinc    682822 Oct 18 19:47 log.46771637._032256.job.log.1
[2025-10-18 19:47:54] -rw------- 1 boinc boinc       357 Oct 18 19:47 output.list
[2025-10-18 19:47:54] -rw-r--r-- 1 boinc boinc       620 Oct 18 19:47 runtime_log
[2025-10-18 19:47:54] -rw------- 1 boinc boinc    952320 Oct 18 19:47 result.tar.gz
[2025-10-18 19:47:54] -rw------- 1 boinc boinc       661 Oct 18 19:47 tw5NDmAK7T8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmv0uNDmxJ2fJm.diag
[2025-10-18 19:47:54] -rw-r--r-- 1 boinc boinc      8792 Oct 18 19:47 runtime_log.err
[2025-10-18 19:47:54] -rw-r--r-- 1 boinc boinc      7987 Oct 18 19:47 stderr.txt
[2025-10-18 19:47:54] HITS file was successfully produced:
[2025-10-18 19:47:54] -rw------- 1 boinc boinc 205709604 Oct 18 19:46 shared/HITS.pool.root.1
[2025-10-18 19:47:54]  *** Contents of shared directory: ***
[2025-10-18 19:47:54] total 423224
[2025-10-18 19:47:54] -rw-r--r-- 2 boinc boinc 226112190 Oct 18 18:29 ATLAS.root_0
[2025-10-18 19:47:54] -rw-r--r-- 2 boinc boinc    569680 Oct 18 18:29 input.tar.gz
[2025-10-18 19:47:54] -rw-r--r-- 2 boinc boinc     15120 Oct 18 18:29 start_atlas.sh
[2025-10-18 19:47:54] -rw------- 1 boinc boinc 205709604 Oct 18 19:46 HITS.pool.root.1
[2025-10-18 19:47:54] -rw------- 1 boinc boinc    952320 Oct 18 19:47 result.tar.gz
19:47:56 (1999644): run_atlas exited; CPU time 17567.513951
19:47:56 (1999644): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN