Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:53:51 (29922): wrapper (7.7.26015): starting
00:53:51 (29922): wrapper: running run_atlas (--nthreads 8)
[2025-10-18 00:53:51] Arguments: --nthreads 8
[2025-10-18 00:53:51] Threads: 8
[2025-10-18 00:53:51] Checking for CVMFS
[2025-10-18 00:53:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 00:53:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 00:53:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 00:53:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 00:53:52] 2.11.2.0 2876 9103 80228 151839 1 59 18431485 20275201 1 130560 0 4961294 99.966 621529 39502 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-18 00:53:52] CVMFS is ok
[2025-10-18 00:53:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 00:53:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 00:53:52] Further information can be found at the LHC@home message board.
[2025-10-18 00:53:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 00:53:52] Checking for apptainer binary...
[2025-10-18 00:53:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 00:53:52] Running /usr/bin/apptainer --version
[2025-10-18 00:53:52] apptainer version 1.3.2-1.el7
[2025-10-18 00:53:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 00:53:54] c-204-40.aglt2.org
[2025-10-18 00:53:54] apptainer works
[2025-10-18 00:53:54] Set ATHENA_PROC_NUMBER=8
[2025-10-18 00:53:54] Set ATHENA_CORE_NUMBER=8
[2025-10-18 00:53:54] Starting ATLAS job with PandaID=6848012130
[2025-10-18 00:53:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 03:15:31]  *** The last 200 lines of the pilot log: ***
[2025-10-18 03:15:31] 2025-10-18 07:14:36,303 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 03:15:31] 2025-10-18 07:14:36,303 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 03:15:31] 2025-10-18 07:14:36,306 | INFO     | fitting pss+swap vs Time
[2025-10-18 03:15:31] 2025-10-18 07:14:36,306 | INFO     | sum of square deviations: 814878534.5
[2025-10-18 03:15:31] 2025-10-18 07:14:36,307 | INFO     | sum of deviations: -2118269133.499998
[2025-10-18 03:15:31] 2025-10-18 07:14:36,308 | INFO     | mean x: 1760767460.5
[2025-10-18 03:15:31] 2025-10-18 07:14:36,308 | INFO     | mean y: 2484152.586956522
[2025-10-18 03:15:31] 2025-10-18 07:14:36,308 | INFO     | -- intersect: 4579582707.694776
[2025-10-18 03:15:31] 2025-10-18 07:14:36,308 | INFO     | intersect: 4579582707.694776
[2025-10-18 03:15:31] 2025-10-18 07:14:36,308 | INFO     | chi2: 2.3245204004883595
[2025-10-18 03:15:31] 2025-10-18 07:14:36,309 | INFO     | sum of square deviations: 729472282.0
[2025-10-18 03:15:31] 2025-10-18 07:14:36,309 | INFO     | sum of deviations: 7346559400.000004
[2025-10-18 03:15:31] 2025-10-18 07:14:36,310 | INFO     | mean x: 1760767308.0
[2025-10-18 03:15:31] 2025-10-18 07:14:36,310 | INFO     | mean y: 2500552.210526316
[2025-10-18 03:15:31] 2025-10-18 07:14:36,310 | INFO     | -- intersect: -17730293327.680996
[2025-10-18 03:15:31] 2025-10-18 07:14:36,310 | INFO     | intersect: -17730293327.680996
[2025-10-18 03:15:31] 2025-10-18 07:14:36,310 | INFO     | chi2: 1.4808306329484464
[2025-10-18 03:15:31] 2025-10-18 07:14:36,310 | INFO     | current chi2=1.4808306329484464 (change=36.295218891718996 %)
[2025-10-18 03:15:31] 2025-10-18 07:14:36,311 | INFO     | sum of square deviations: 650252192.0
[2025-10-18 03:15:31] 2025-10-18 07:14:36,311 | INFO     | sum of deviations: 7073206139.0
[2025-10-18 03:15:31] 2025-10-18 07:14:36,312 | INFO     | mean x: 1760767155.5
[2025-10-18 03:15:31] 2025-10-18 07:14:36,312 | INFO     | mean y: 2500025.796875
[2025-10-18 03:15:31] 2025-10-18 07:14:36,312 | INFO     | -- intersect: -19150482781.267876
[2025-10-18 03:15:31] 2025-10-18 07:14:36,312 | INFO     | intersect: -19150482781.267876
[2025-10-18 03:15:31] 2025-10-18 07:14:36,312 | INFO     | chi2: 1.4825707772768548
[2025-10-18 03:15:31] 2025-10-18 07:14:36,313 | INFO     | current chi2=1.4825707772768548 (change=-0.11751136758588326 %)
[2025-10-18 03:15:31] 2025-10-18 07:14:36,313 | INFO     | right removable region: 127
[2025-10-18 03:15:31] 2025-10-18 07:14:36,313 | INFO     | sum of square deviations: 729472282.0
[2025-10-18 03:15:31] 2025-10-18 07:14:36,314 | INFO     | sum of deviations: -21224003097.0
[2025-10-18 03:15:31] 2025-10-18 07:14:36,314 | INFO     | mean x: 1760767613.0
[2025-10-18 03:15:31] 2025-10-18 07:14:36,314 | INFO     | mean y: 2517656.676691729
[2025-10-18 03:15:31] 2025-10-18 07:14:36,314 | INFO     | -- intersect: 51232068379.22121
[2025-10-18 03:15:31] 2025-10-18 07:14:36,314 | INFO     | intersect: 51232068379.22121
[2025-10-18 03:15:31] 2025-10-18 07:14:36,315 | INFO     | chi2: 0.9844325975453538
[2025-10-18 03:15:31] 2025-10-18 07:14:36,315 | INFO     | current chi2=0.9844325975453538 (change=57.6500770938154 %)
[2025-10-18 03:15:31] 2025-10-18 07:14:36,315 | INFO     | sum of square deviations: 650252192.0
[2025-10-18 03:15:31] 2025-10-18 07:14:36,316 | INFO     | sum of deviations: -18430945101.0
[2025-10-18 03:15:31] 2025-10-18 07:14:36,316 | INFO     | mean x: 1760767765.5
[2025-10-18 03:15:31] 2025-10-18 07:14:36,316 | INFO     | mean y: 2512196.5
[2025-10-18 03:15:31] 2025-10-18 07:14:36,316 | INFO     | -- intersect: 49910247104.283195
[2025-10-18 03:15:31] 2025-10-18 07:14:36,316 | INFO     | intersect: 49910247104.283195
[2025-10-18 03:15:31] 2025-10-18 07:14:36,316 | INFO     | chi2: 0.9715067188190999
[2025-10-18 03:15:31] 2025-10-18 07:14:36,317 | INFO     | current chi2=0.9715067188190999 (change=1.313028312805178 %)
[2025-10-18 03:15:31] 2025-10-18 07:14:36,317 | INFO     | left removable region: 20
[2025-10-18 03:15:31] 2025-10-18 07:14:36,317 | INFO     | sum of square deviations: 379832238.0
[2025-10-18 03:15:31] 2025-10-18 07:14:36,317 | INFO     | sum of deviations: -15961564.999999968
[2025-10-18 03:15:31] 2025-10-18 07:14:36,318 | INFO     | mean x: 1760767735.0
[2025-10-18 03:15:31] 2025-10-18 07:14:36,318 | INFO     | mean y: 2509135.9906542054
[2025-10-18 03:15:31] 2025-10-18 07:14:36,318 | INFO     | -- intersect: 76501298.42554794
[2025-10-18 03:15:31] 2025-10-18 07:14:36,318 | INFO     | intersect: 76501298.42554794
[2025-10-18 03:15:31] 2025-10-18 07:14:36,318 | INFO     | chi2: 0.013693307107553522
[2025-10-18 03:15:31] 2025-10-18 07:14:36,318 | INFO     | -- intersect: 76501298.42554794
[2025-10-18 03:15:31] 2025-10-18 07:14:36,318 | INFO     | current memory leak: -0.04 B/s (using 107 data points, chi2=0.01)
[2025-10-18 03:15:31] 2025-10-18 07:14:36,319 | INFO     | could have reported an average CPU frequency of 1987 MHz (8 samples)
[2025-10-18 03:15:31] 2025-10-18 07:14:36,319 | INFO     | ..............................
[2025-10-18 03:15:31] 2025-10-18 07:14:36,319 | INFO     | . Timing measurements:
[2025-10-18 03:15:31] 2025-10-18 07:14:36,319 | INFO     | . get job = 0 s
[2025-10-18 03:15:31] 2025-10-18 07:14:36,319 | INFO     | . initial setup = 2 s
[2025-10-18 03:15:31] 2025-10-18 07:14:36,319 | INFO     | . payload setup = 8 s
[2025-10-18 03:15:31] 2025-10-18 07:14:36,320 | INFO     | . stage-in = 0 s
[2025-10-18 03:15:31] 2025-10-18 07:14:36,320 | INFO     | . payload execution = 8388 s
[2025-10-18 03:15:31] 2025-10-18 07:14:36,320 | INFO     | . stage-out = 0 s
[2025-10-18 03:15:31] 2025-10-18 07:14:36,320 | INFO     | . log creation = 0 s
[2025-10-18 03:15:31] 2025-10-18 07:14:36,320 | INFO     | ..............................
[2025-10-18 03:15:31] 2025-10-18 07:14:36,410 | INFO     | 
[2025-10-18 03:15:31] 2025-10-18 07:14:36,411 | INFO     | job summary report
[2025-10-18 03:15:31] 2025-10-18 07:14:36,411 | INFO     | --------------------------------------------------
[2025-10-18 03:15:31] 2025-10-18 07:14:36,411 | INFO     | PanDA job id: 6848012130
[2025-10-18 03:15:31] 2025-10-18 07:14:36,411 | INFO     | task id: 46771637
[2025-10-18 03:15:31] 2025-10-18 07:14:36,411 | INFO     | errors: (none)
[2025-10-18 03:15:31] 2025-10-18 07:14:36,411 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 03:15:31] 2025-10-18 07:14:36,412 | INFO     | pilot state: finished 
[2025-10-18 03:15:31] 2025-10-18 07:14:36,412 | INFO     | transexitcode: 0
[2025-10-18 03:15:31] 2025-10-18 07:14:36,412 | INFO     | exeerrorcode: 0
[2025-10-18 03:15:31] 2025-10-18 07:14:36,412 | INFO     | exeerrordiag: 
[2025-10-18 03:15:31] 2025-10-18 07:14:36,412 | INFO     | exitcode: 0
[2025-10-18 03:15:31] 2025-10-18 07:14:36,412 | INFO     | exitmsg: OK
[2025-10-18 03:15:31] 2025-10-18 07:14:36,413 | INFO     | cpuconsumptiontime: 61971 s
[2025-10-18 03:15:31] 2025-10-18 07:14:36,413 | INFO     | nevents: 400
[2025-10-18 03:15:31] 2025-10-18 07:14:36,413 | INFO     | neventsw: 0
[2025-10-18 03:15:31] 2025-10-18 07:14:36,413 | INFO     | pid: 7837
[2025-10-18 03:15:31] 2025-10-18 07:14:36,413 | INFO     | pgrp: 7837
[2025-10-18 03:15:31] 2025-10-18 07:14:36,413 | INFO     | corecount: 8
[2025-10-18 03:15:31] 2025-10-18 07:14:36,414 | INFO     | event service: False
[2025-10-18 03:15:31] 2025-10-18 07:14:36,414 | INFO     | sizes: {0: 2348928, 6: 2349190, 11: 2349218, 8400: 2377071, 8401: 2386125, 8407: 2386263}
[2025-10-18 03:15:31] 2025-10-18 07:14:36,414 | INFO     | --------------------------------------------------
[2025-10-18 03:15:31] 2025-10-18 07:14:36,414 | INFO     | 
[2025-10-18 03:15:31] 2025-10-18 07:14:36,414 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 03:15:31] 2025-10-18 07:14:36,443 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,444 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,444 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,444 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,444 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,445 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,445 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,445 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,445 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,447 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,447 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 03:15:31] 2025-10-18 07:14:36,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,447 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 03:15:31] 2025-10-18 07:14:36,447 | INFO     | job 6848012130 has completed (purged errors)
[2025-10-18 03:15:31] 2025-10-18 07:14:36,448 | INFO     | overall cleanup function is called
[2025-10-18 03:15:31] 2025-10-18 07:14:37,455 | INFO     | --- collectZombieJob: --- 10, [7837]
[2025-10-18 03:15:31] 2025-10-18 07:14:37,456 | INFO     | zombie collector waiting for pid 7837
[2025-10-18 03:15:31] 2025-10-18 07:14:37,456 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 03:15:31] 2025-10-18 07:14:37,456 | INFO     | collected zombie processes
[2025-10-18 03:15:31] 2025-10-18 07:14:37,456 | INFO     | will attempt to kill all subprocesses of pid=7837
[2025-10-18 03:15:31] 2025-10-18 07:14:37,550 | INFO     | process IDs to be killed: [7837] (in reverse order)
[2025-10-18 03:15:31] 2025-10-18 07:14:37,606 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 03:15:31] 2025-10-18 07:14:37,606 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 03:15:31] 2025-10-18 07:14:37,610 | INFO     | did not find any defunct processes belonging to 7837
[2025-10-18 03:15:31] 2025-10-18 07:14:37,613 | INFO     | did not find any defunct processes belonging to 7837
[2025-10-18 03:15:31] 2025-10-18 07:14:37,613 | INFO     | ready for new job
[2025-10-18 03:15:31] 2025-10-18 07:14:37,613 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 03:15:31] 2025-10-18 07:14:37,615 | INFO     | ***************************************
[2025-10-18 03:15:31] 2025-10-18 07:14:37,615 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 03:15:31] 2025-10-18 07:14:37,615 | INFO     | ***************************************
[2025-10-18 03:15:31] 2025-10-18 07:14:37,615 | INFO     | 
[2025-10-18 03:15:31] 2025-10-18 07:14:37,616 | INFO     | architecture information:
[2025-10-18 03:15:31] 2025-10-18 07:14:37,616 | INFO     | executing command: cat /etc/os-release
[2025-10-18 03:15:31] 2025-10-18 07:14:37,635 | INFO     | cat /etc/os-release:
[2025-10-18 03:15:31] NAME="CentOS Linux"
[2025-10-18 03:15:31] VERSION="7 (Core)"
[2025-10-18 03:15:31] ID="centos"
[2025-10-18 03:15:31] ID_LIKE="rhel fedora"
[2025-10-18 03:15:31] VERSION_ID="7"
[2025-10-18 03:15:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 03:15:31] ANSI_COLOR="0;31"
[2025-10-18 03:15:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 03:15:31] HOME_URL="https://www.centos.org/"
[2025-10-18 03:15:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 03:15:31] 
[2025-10-18 03:15:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 03:15:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 03:15:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 03:15:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 03:15:31] 
[2025-10-18 03:15:31] 2025-10-18 07:14:37,636 | INFO     | ***************************************
[2025-10-18 03:15:31] 2025-10-18 07:14:38,139 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 03:15:31] 2025-10-18 07:14:38,160 | INFO     | sufficient remaining disk space (18531483648 B)
[2025-10-18 03:15:31] 2025-10-18 07:14:38,160 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 03:15:31] 2025-10-18 07:14:38,160 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 03:15:31] 2025-10-18 07:14:38,161 | INFO     | update_server=False
[2025-10-18 03:15:31] 2025-10-18 07:14:38,161 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 03:15:31] 2025-10-18 07:14:38,161 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 03:15:31] 2025-10-18 07:14:38,243 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 03:15:31] 2025-10-18 07:14:38,280 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-18 03:15:31] 2025-10-18 07:14:38,280 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-18 03:15:31] 2025-10-18 07:14:38,280 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 03:15:31] 2025-10-18 07:14:38,281 | INFO     | will abort loop
[2025-10-18 03:15:31] 2025-10-18 07:14:38,353 | INFO     | all data control threads have been joined
[2025-10-18 03:15:31] 2025-10-18 07:14:38,759 | INFO     | all payload control threads have been joined
[2025-10-18 03:15:31] 2025-10-18 07:14:39,166 | INFO     | [job] retrieve thread has finished
[2025-10-18 03:15:31] 2025-10-18 07:14:39,167 | INFO     | [job] queue monitor thread has finished
[2025-10-18 03:15:31] 2025-10-18 07:14:39,219 | INFO     | [payload] failed_post thread has finished
[2025-10-18 03:15:31] 2025-10-18 07:14:39,286 | INFO     | [job] job monitor thread has finished
[2025-10-18 03:15:31] 2025-10-18 07:14:39,359 | INFO     | [data] control thread has finished
[2025-10-18 03:15:31] 2025-10-18 07:14:39,529 | INFO     | all job control threads have been joined
[2025-10-18 03:15:31] 2025-10-18 07:14:39,682 | INFO     | [data] copytool_in thread has finished
[2025-10-18 03:15:31] 2025-10-18 07:14:39,728 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 03:15:31] 2025-10-18 07:14:39,764 | INFO     | [payload] control thread has finished
[2025-10-18 03:15:31] 2025-10-18 07:14:39,793 | INFO     | [payload] validate_post thread has finished
[2025-10-18 03:15:31] 2025-10-18 07:14:40,176 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 03:15:31] 2025-10-18 07:14:40,244 | INFO     | [data] copytool_out thread has finished
[2025-10-18 03:15:31] 2025-10-18 07:14:40,264 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 03:15:31] 2025-10-18 07:14:40,445 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 03:15:31] 2025-10-18 07:14:40,530 | INFO     | [job] control thread has finished
[2025-10-18 03:15:31] 2025-10-18 07:14:40,587 | INFO     | [job] validate thread has finished
[2025-10-18 03:15:31] 2025-10-18 07:14:40,831 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 03:15:31] 2025-10-18 07:14:44,837 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 03:15:31] 2025-10-18 07:15:08,773 | INFO     | PID=1200 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-18 03:15:31] 2025-10-18 07:15:08,773 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 03:15:31] 2025-10-18 07:15:08,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 03:15:31] 2025-10-18 07:15:08,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 03:15:31] 2025-10-18 07:15:24,859 | INFO     | [monitor] cgroup control has ended
[2025-10-18 03:15:31] 2025-10-18 07:15:25,810 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139632352204608)>', '<ExcThread(monitor, started 139631223875328)>']
[2025-10-18 03:15:31] 2025-10-18 07:15:25,854 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 03:15:31] 2025-10-18 07:15:25,854 | INFO     | [monitor] control thread has ended
[2025-10-18 03:15:31] 2025-10-18 07:15:30,835 | INFO     | all workflow threads have been joined
[2025-10-18 03:15:31] 2025-10-18 07:15:30,836 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 03:15:31] 2025-10-18 07:15:30,836 | INFO     | traces error code: 0
[2025-10-18 03:15:31] 2025-10-18 07:15:30,836 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 03:15:31] 2025-10-18 07:15:30,951 [wrapper] ==== pilot stdout END ====
[2025-10-18 03:15:31] 2025-10-18 07:15:30,956 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 03:15:31] 2025-10-18 07:15:30,961 [wrapper] pilotpid: 1200
[2025-10-18 03:15:31] 2025-10-18 07:15:30,966 [wrapper] Pilot exit status: 0
[2025-10-18 03:15:31] 2025-10-18 07:15:30,986 [wrapper] pandaids: 6848012130
[2025-10-18 03:15:31] 2025-10-18 07:15:31,039 [wrapper] cleanup supervisor_pilot 23925 1201
[2025-10-18 03:15:31] 2025-10-18 07:15:31,045 [wrapper] Test setup, not cleaning
[2025-10-18 03:15:31] 2025-10-18 07:15:31,050 [wrapper] apfmon messages muted
[2025-10-18 03:15:31] 2025-10-18 07:15:31,054 [wrapper] ==== wrapper stdout END ====
[2025-10-18 03:15:31] 2025-10-18 07:15:31,059 [wrapper] ==== wrapper stderr END ====
[2025-10-18 03:15:31]  *** Error codes and diagnostics ***
[2025-10-18 03:15:31]     "exeErrorCode": 0,
[2025-10-18 03:15:31]     "exeErrorDiag": "",
[2025-10-18 03:15:31]     "pilotErrorCode": 0,
[2025-10-18 03:15:31]     "pilotErrorDiag": "",
[2025-10-18 03:15:31]  *** Listing of results directory ***
[2025-10-18 03:15:31] total 428404
[2025-10-18 03:15:31] -rw-r--r-- 1 boincer umatlas    557409 Oct 17 16:59 pilot3.tar.gz
[2025-10-18 03:15:31] -rw-r--r-- 1 boincer umatlas      5112 Oct 17 17:30 queuedata.json
[2025-10-18 03:15:31] -rwx------ 1 boincer umatlas     36292 Oct 17 17:31 runpilot2-wrapper.sh
[2025-10-18 03:15:31] -rw-r--r-- 1 boincer umatlas       100 Oct 18 00:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 03:15:31] -rwxr-xr-x 1 boincer umatlas      7986 Oct 18 00:53 run_atlas
[2025-10-18 03:15:31] -rw-r--r-- 1 boincer umatlas       105 Oct 18 00:53 job.xml
[2025-10-18 03:15:31] -rw-r--r-- 2 boincer umatlas 225890400 Oct 18 00:53 EVNT.46771634._001404.pool.root.1
[2025-10-18 03:15:31] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 00:53 start_atlas.sh
[2025-10-18 03:15:31] drwxrwx--x 2 boincer umatlas      4096 Oct 18 00:53 shared
[2025-10-18 03:15:31] -rw-r--r-- 2 boincer umatlas    569679 Oct 18 00:53 input.tar.gz
[2025-10-18 03:15:31] -rw-r--r-- 1 boincer umatlas         0 Oct 18 00:53 boinc_lockfile
[2025-10-18 03:15:31] -rw-r--r-- 1 boincer umatlas      2557 Oct 18 00:53 pandaJob.out
[2025-10-18 03:15:31] -rw------- 1 boincer umatlas    976749 Oct 18 00:54 agis_schedconf.cvmfs.json
[2025-10-18 03:15:31] -rw------- 1 boincer umatlas   1560740 Oct 18 00:54 agis_ddmendpoints.agis.ALL.json
[2025-10-18 03:15:31] drwx------ 5 boincer umatlas      4096 Oct 18 00:54 pilot3
[2025-10-18 03:15:31] -rw-r--r-- 1 boincer umatlas      5910 Oct 18 03:09 init_data.xml
[2025-10-18 03:15:31] -rw------- 1 boincer umatlas 205787638 Oct 18 03:13 HITS.46771637._032088.pool.root.1
[2025-10-18 03:15:31] -rw------- 1 boincer umatlas        95 Oct 18 03:14 pilot_heartbeat.json
[2025-10-18 03:15:31] -rw-r--r-- 1 boincer umatlas       529 Oct 18 03:14 boinc_task_state.xml
[2025-10-18 03:15:31] -rw------- 1 boincer umatlas      1051 Oct 18 03:14 memory_monitor_summary.json
[2025-10-18 03:15:31] -rw------- 1 boincer umatlas    371747 Oct 18 03:14 log.46771637._032088.job.log.tgz.1
[2025-10-18 03:15:31] -rw------- 1 boincer umatlas      7840 Oct 18 03:14 heartbeat.json
[2025-10-18 03:15:31] -rw-r--r-- 1 boincer umatlas        27 Oct 18 03:15 wrapper_checkpoint.txt
[2025-10-18 03:15:31] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 03:15 boinc_mmap_file
[2025-10-18 03:15:31] -rw------- 1 boincer umatlas      4931 Oct 18 03:15 pilotlog.txt
[2025-10-18 03:15:31] -rw------- 1 boincer umatlas   1177390 Oct 18 03:15 log.46771637._032088.job.log.1
[2025-10-18 03:15:31] -rw------- 1 boincer umatlas       357 Oct 18 03:15 output.list
[2025-10-18 03:15:31] -rw-r--r-- 1 boincer umatlas       620 Oct 18 03:15 runtime_log
[2025-10-18 03:15:31] -rw------- 1 boincer umatlas   1566720 Oct 18 03:15 result.tar.gz
[2025-10-18 03:15:31] -rw-r--r-- 1 boincer umatlas      8703 Oct 18 03:15 runtime_log.err
[2025-10-18 03:15:31] -rw------- 1 boincer umatlas       660 Oct 18 03:15 2ENODmcD7T8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOzuNDmO5TKLn.diag
[2025-10-18 03:15:31] -rw-r--r-- 1 boincer umatlas     20838 Oct 18 03:15 stderr.txt
[2025-10-18 03:15:31] HITS file was successfully produced:
[2025-10-18 03:15:31] -rw------- 1 boincer umatlas 205787638 Oct 18 03:13 shared/HITS.pool.root.1
[2025-10-18 03:15:31]  *** Contents of shared directory: ***
[2025-10-18 03:15:31] total 423684
[2025-10-18 03:15:31] -rw-r--r-- 2 boincer umatlas 225890400 Oct 18 00:53 ATLAS.root_0
[2025-10-18 03:15:31] -rw-r--r-- 2 boincer umatlas     15120 Oct 18 00:53 start_atlas.sh
[2025-10-18 03:15:31] -rw-r--r-- 2 boincer umatlas    569679 Oct 18 00:53 input.tar.gz
[2025-10-18 03:15:31] -rw------- 1 boincer umatlas 205787638 Oct 18 03:13 HITS.pool.root.1
[2025-10-18 03:15:31] -rw------- 1 boincer umatlas   1566720 Oct 18 03:15 result.tar.gz
03:15:33 (29922): run_atlas exited; CPU time 61926.676717
03:15:33 (29922): called boinc_finish(0)

</stderr_txt>
]]>

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