Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:02:52 (525244): wrapper (7.7.26015): starting
16:02:52 (525244): wrapper: running run_atlas (--nthreads 3)
[2025-10-18 16:02:52] Arguments: --nthreads 3
[2025-10-18 16:02:52] Threads: 3
[2025-10-18 16:02:52] Checking for CVMFS
[2025-10-18 16:02:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 16:02:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 16:02:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 16:02:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 16:02:52] 2.9.2.0 3731150 3478 81224 151852 1 57 30284418 36864000 0 130560 0 2590828 99.990 124960 2727 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-18 16:02:52] CVMFS is ok
[2025-10-18 16:02:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 16:02:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 16:02:52] Further information can be found at the LHC@home message board.
[2025-10-18 16:02:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 16:02:52] Checking for apptainer binary...
[2025-10-18 16:02:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 16:02:52] Running /usr/bin/apptainer --version
[2025-10-18 16:02:52] apptainer version 1.4.1-1.1
[2025-10-18 16:02:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 16:02:53] thA337a
[2025-10-18 16:02:53] apptainer works
[2025-10-18 16:02:53] Set ATHENA_PROC_NUMBER=3
[2025-10-18 16:02:53] Set ATHENA_CORE_NUMBER=3
[2025-10-18 16:02:53] Starting ATLAS job with PandaID=6848325796
[2025-10-18 16:02:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 17:35:11]  *** The last 200 lines of the pilot log: ***
[2025-10-18 17:35:11] 2025-10-18 15:34:13,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 17:35:11] 2025-10-18 15:34:13,873 | INFO     | [data] copytool_in thread has finished
[2025-10-18 17:35:11] 2025-10-18 15:34:13,929 | INFO     | [payload] validate_post thread has finished
[2025-10-18 17:35:11] 2025-10-18 15:34:14,075 | INFO     | [job] job monitor thread has finished
[2025-10-18 17:35:11] 2025-10-18 15:34:14,196 | INFO     | [data] control thread has finished
[2025-10-18 17:35:11] 2025-10-18 15:34:14,199 | INFO     | all job control threads have been joined
[2025-10-18 17:35:11] 2025-10-18 15:34:14,215 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 17:35:11] 2025-10-18 15:34:14,227 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 17:35:11] 2025-10-18 15:34:14,241 | INFO     | [job] validate thread has finished
[2025-10-18 17:35:11] 2025-10-18 15:34:14,266 | INFO     | [payload] failed_post thread has finished
[2025-10-18 17:35:11] 2025-10-18 15:34:14,471 | INFO     | [payload] control thread has finished
[2025-10-18 17:35:11] 2025-10-18 15:34:14,496 | INFO     | [data] copytool_out thread has finished
[2025-10-18 17:35:11] 2025-10-18 15:34:14,904 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 17:35:11] 2025-10-18 15:34:15,205 | INFO     | [job] control thread has finished
[2025-10-18 17:35:11] 2025-10-18 15:34:17,717 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 17:35:11] 2025-10-18 15:34:23,316 | INFO     | job.realtimelogging is not enabled
[2025-10-18 17:35:11] 2025-10-18 15:34:24,321 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 17:35:11] 2025-10-18 15:34:43,427 | INFO     | PID=528961 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-18 17:35:11] 2025-10-18 15:34:43,428 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 17:35:11] 2025-10-18 15:34:43,428 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 17:35:11] 2025-10-18 15:34:43,428 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 17:35:11] 2025-10-18 15:35:05,926 | INFO     | [monitor] cgroup control has ended
[2025-10-18 17:35:11] 2025-10-18 15:35:05,999 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139644000106304)>', '<ExcThread(monitor, started 139643639015168)>']
[2025-10-18 17:35:11] 2025-10-18 15:35:06,548 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 17:35:11] 2025-10-18 15:35:06,548 | INFO     | [monitor] control thread has ended
[2025-10-18 17:35:11] 2025-10-18 15:35:11,000 | INFO     | all workflow threads have been joined
[2025-10-18 17:35:11] 2025-10-18 15:35:11,001 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 17:35:11] 2025-10-18 15:35:11,001 | INFO     | traces error code: 0
[2025-10-18 17:35:11] 2025-10-18 15:35:11,001 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 17:35:11] 2025-10-18 15:35:11,050 [wrapper] ==== pilot stdout END ====
[2025-10-18 17:35:11] 2025-10-18 15:35:11,052 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 17:35:11] 2025-10-18 15:35:11,054 [wrapper] pilotpid: 528961
[2025-10-18 17:35:11] 2025-10-18 15:35:11,057 [wrapper] Pilot exit status: 0
[2025-10-18 17:35:11] 2025-10-18 15:35:11,064 [wrapper] pandaids: 6848325796
[2025-10-18 17:35:11] 2025-10-18 15:35:11,082 [wrapper] cleanup supervisor_pilot  548057 528962
[2025-10-18 17:35:11] 2025-10-18 15:35:11,085 [wrapper] Test setup, not cleaning
[2025-10-18 17:35:11] 2025-10-18 15:35:11,088 [wrapper] apfmon messages muted
[2025-10-18 17:35:11] 2025-10-18 15:35:11,090 [wrapper] ==== wrapper stdout END ====
[2025-10-18 17:35:11] 2025-10-18 15:35:11,092 [wrapper] ==== wrapper stderr END ====
[2025-10-18 17:35:11]  *** Error codes and diagnostics ***
[2025-10-18 17:35:11]     "exeErrorCode": 0,
[2025-10-18 17:35:11]     "exeErrorDiag": "",
[2025-10-18 17:35:11]     "pilotErrorCode": 0,
[2025-10-18 17:35:11]     "pilotErrorDiag": "",
[2025-10-18 17:35:11]  *** Listing of results directory ***
[2025-10-18 17:35:11] total 436500
[2025-10-18 17:35:11] -rw-r--r-- 1 boinc boinc    557409 Oct 17 07:39 pilot3.tar.gz
[2025-10-18 17:35:11] -rw-r--r-- 1 boinc boinc      5112 Oct 17 08:13 queuedata.json
[2025-10-18 17:35:11] -rwx------ 1 boinc boinc     36292 Oct 17 08:14 runpilot2-wrapper.sh
[2025-10-18 17:35:11] -rw-r--r-- 1 boinc boinc       100 Oct 18 16:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 17:35:11] -rwxr-xr-x 1 boinc boinc      7986 Oct 18 16:02 run_atlas
[2025-10-18 17:35:11] -rw-r--r-- 1 boinc boinc       105 Oct 18 16:02 job.xml
[2025-10-18 17:35:11] -rw-r--r-- 2 boinc boinc 226246974 Oct 18 16:02 EVNT.46808924._000129.pool.root.1
[2025-10-18 17:35:11] -rw-r--r-- 2 boinc boinc    569678 Oct 18 16:02 input.tar.gz
[2025-10-18 17:35:11] -rw-r--r-- 2 boinc boinc     15120 Oct 18 16:02 start_atlas.sh
[2025-10-18 17:35:11] drwxrwx--x 2 boinc boinc      4096 Oct 18 16:02 shared
[2025-10-18 17:35:11] -rw-r--r-- 1 boinc boinc         0 Oct 18 16:02 boinc_setup_complete
[2025-10-18 17:35:11] -rw-r--r-- 1 boinc boinc      6447 Oct 18 16:02 init_data.xml
[2025-10-18 17:35:11] -rw-r--r-- 1 boinc boinc         0 Oct 18 16:02 boinc_lockfile
[2025-10-18 17:35:11] -rw-r--r-- 1 boinc boinc      2543 Oct 18 16:02 pandaJob.out
[2025-10-18 17:35:11] -rw------- 1 boinc boinc    976742 Oct 18 16:02 agis_schedconf.cvmfs.json
[2025-10-18 17:35:11] -rw------- 1 boinc boinc   1560740 Oct 18 16:02 agis_ddmendpoints.agis.ALL.json
[2025-10-18 17:35:11] drwx------ 5 boinc boinc      4096 Oct 18 16:02 pilot3
[2025-10-18 17:35:11] -rw------- 1 boinc boinc 214720564 Oct 18 17:33 HITS.46808926._003188.pool.root.1
[2025-10-18 17:35:11] -rw-r--r-- 1 boinc boinc       529 Oct 18 17:33 boinc_task_state.xml
[2025-10-18 17:35:11] -rw------- 1 boinc boinc      1017 Oct 18 17:34 memory_monitor_summary.json
[2025-10-18 17:35:11] -rw------- 1 boinc boinc    259707 Oct 18 17:34 log.46808926._003188.job.log.tgz.1
[2025-10-18 17:35:11] -rw------- 1 boinc boinc      7745 Oct 18 17:34 heartbeat.json
[2025-10-18 17:35:11] -rw------- 1 boinc boinc        95 Oct 18 17:34 pilot_heartbeat.json
[2025-10-18 17:35:11] -rw-r--r-- 1 boinc boinc      8192 Oct 18 17:35 boinc_mmap_file
[2025-10-18 17:35:11] -rw-r--r-- 1 boinc boinc        27 Oct 18 17:35 wrapper_checkpoint.txt
[2025-10-18 17:35:11] -rw------- 1 boinc boinc      4823 Oct 18 17:35 pilotlog.txt
[2025-10-18 17:35:11] -rw------- 1 boinc boinc    798719 Oct 18 17:35 log.46808926._003188.job.log.1
[2025-10-18 17:35:11] -rw------- 1 boinc boinc       357 Oct 18 17:35 output.list
[2025-10-18 17:35:11] -rw-r--r-- 1 boinc boinc       620 Oct 18 17:35 runtime_log
[2025-10-18 17:35:11] -rw------- 1 boinc boinc   1075200 Oct 18 17:35 result.tar.gz
[2025-10-18 17:35:11] -rw-r--r-- 1 boinc boinc      8782 Oct 18 17:35 runtime_log.err
[2025-10-18 17:35:11] -rw------- 1 boinc boinc       659 Oct 18 17:35 4OCMDmCusT8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTtsNDmunNSKn.diag
[2025-10-18 17:35:11] -rw-r--r-- 1 boinc boinc      6430 Oct 18 17:35 stderr.txt
[2025-10-18 17:35:11] HITS file was successfully produced:
[2025-10-18 17:35:11] -rw------- 1 boinc boinc 214720564 Oct 18 17:33 shared/HITS.pool.root.1
[2025-10-18 17:35:11]  *** Contents of shared directory: ***
[2025-10-18 17:35:11] total 432276
[2025-10-18 17:35:11] -rw-r--r-- 2 boinc boinc 226246974 Oct 18 16:02 ATLAS.root_0
[2025-10-18 17:35:11] -rw-r--r-- 2 boinc boinc    569678 Oct 18 16:02 input.tar.gz
[2025-10-18 17:35:11] -rw-r--r-- 2 boinc boinc     15120 Oct 18 16:02 start_atlas.sh
[2025-10-18 17:35:11] -rw------- 1 boinc boinc 214720564 Oct 18 17:33 HITS.pool.root.1
[2025-10-18 17:35:11] -rw------- 1 boinc boinc   1075200 Oct 18 17:35 result.tar.gz
17:35:12 (525244): run_atlas exited; CPU time 15766.577197
17:35:12 (525244): called boinc_finish(0)

</stderr_txt>
]]>

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