Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:52:30 (3703367): wrapper (7.7.26015): starting
15:52:30 (3703367): wrapper: running run_atlas (--nthreads 2)
[2025-10-18 15:52:30] Arguments: --nthreads 2
[2025-10-18 15:52:30] Threads: 2
[2025-10-18 15:52:30] Checking for CVMFS
[2025-10-18 15:52:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 15:52:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 15:52:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 15:52:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 15:52:30] 2.9.2.0 2907177 3668 62068 151852 0 57 28460565 36864000 0 130560 0 2069913 99.987 133778 2866 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-18 15:52:30] CVMFS is ok
[2025-10-18 15:52:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 15:52:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 15:52:30] Further information can be found at the LHC@home message board.
[2025-10-18 15:52:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 15:52:30] Checking for apptainer binary...
[2025-10-18 15:52:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 15:52:30] Running /usr/bin/apptainer --version
[2025-10-18 15:52:30] apptainer version 1.4.1-1.1
[2025-10-18 15:52:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 15:52:30] madmaxA275
[2025-10-18 15:52:30] apptainer works
[2025-10-18 15:52:30] Set ATHENA_PROC_NUMBER=2
[2025-10-18 15:52:30] Set ATHENA_CORE_NUMBER=2
[2025-10-18 15:52:30] Starting ATLAS job with PandaID=6848008954
[2025-10-18 15:52:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 18:06:02]  *** The last 200 lines of the pilot log: ***
[2025-10-18 18:06:02] 2025-10-18 16:05:29,174 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 18:06:02] 2025-10-18 16:05:29,175 | INFO     | did not find any defunct processes belonging to 3713489
[2025-10-18 18:06:02] 2025-10-18 16:05:29,176 | INFO     | did not find any defunct processes belonging to 3713489
[2025-10-18 18:06:02] 2025-10-18 16:05:29,176 | INFO     | ready for new job
[2025-10-18 18:06:02] 2025-10-18 16:05:29,176 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 18:06:02] 2025-10-18 16:05:29,176 | INFO     | ***************************************
[2025-10-18 18:06:02] 2025-10-18 16:05:29,176 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 18:06:02] 2025-10-18 16:05:29,176 | INFO     | ***************************************
[2025-10-18 18:06:02] 2025-10-18 16:05:29,176 | INFO     | 
[2025-10-18 18:06:02] 2025-10-18 16:05:29,177 | INFO     | architecture information:
[2025-10-18 18:06:02] 2025-10-18 16:05:29,177 | INFO     | executing command: cat /etc/os-release
[2025-10-18 18:06:02] 2025-10-18 16:05:29,185 | INFO     | cat /etc/os-release:
[2025-10-18 18:06:02] NAME="CentOS Linux"
[2025-10-18 18:06:02] VERSION="7 (Core)"
[2025-10-18 18:06:02] ID="centos"
[2025-10-18 18:06:02] ID_LIKE="rhel fedora"
[2025-10-18 18:06:02] VERSION_ID="7"
[2025-10-18 18:06:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 18:06:02] ANSI_COLOR="0;31"
[2025-10-18 18:06:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 18:06:02] HOME_URL="https://www.centos.org/"
[2025-10-18 18:06:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 18:06:02] 
[2025-10-18 18:06:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 18:06:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 18:06:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 18:06:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 18:06:02] 
[2025-10-18 18:06:02] 2025-10-18 16:05:29,185 | INFO     | ***************************************
[2025-10-18 18:06:02] 2025-10-18 16:05:29,689 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-18 18:06:02] 2025-10-18 16:05:29,700 | INFO     | sufficient remaining disk space (255724617728 B)
[2025-10-18 18:06:02] 2025-10-18 16:05:29,700 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 18:06:02] 2025-10-18 16:05:29,700 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 18:06:02] 2025-10-18 16:05:29,701 | INFO     | update_server=False
[2025-10-18 18:06:02] 2025-10-18 16:05:29,701 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 18:06:02] 2025-10-18 16:05:29,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 18:06:02] 2025-10-18 16:05:29,701 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 18:06:02] 2025-10-18 16:05:29,701 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 18:06:02] 2025-10-18 16:05:29,730 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-18 18:06:02] 2025-10-18 16:05:29,730 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-18 18:06:02] 2025-10-18 16:05:29,730 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 18:06:02] 2025-10-18 16:05:29,730 | INFO     | will abort loop
[2025-10-18 18:06:02] 2025-10-18 16:05:29,884 | INFO     | all data control threads have been joined
[2025-10-18 18:06:02] 2025-10-18 16:05:30,279 | INFO     | all payload control threads have been joined
[2025-10-18 18:06:02] 2025-10-18 16:05:30,704 | INFO     | [job] queue monitor thread has finished
[2025-10-18 18:06:02] 2025-10-18 16:05:30,706 | INFO     | [job] retrieve thread has finished
[2025-10-18 18:06:02] 2025-10-18 16:05:30,720 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 18:06:02] 2025-10-18 16:05:30,736 | INFO     | [job] job monitor thread has finished
[2025-10-18 18:06:02] 2025-10-18 16:05:30,770 | INFO     | [job] validate thread has finished
[2025-10-18 18:06:02] 2025-10-18 16:05:30,861 | INFO     | [data] copytool_in thread has finished
[2025-10-18 18:06:02] 2025-10-18 16:05:30,890 | INFO     | [data] control thread has finished
[2025-10-18 18:06:02] 2025-10-18 16:05:30,937 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 18:06:02] 2025-10-18 16:05:30,949 | INFO     | [payload] failed_post thread has finished
[2025-10-18 18:06:02] 2025-10-18 16:05:30,983 | INFO     | all job control threads have been joined
[2025-10-18 18:06:02] 2025-10-18 16:05:31,268 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 18:06:02] 2025-10-18 16:05:31,284 | INFO     | [payload] control thread has finished
[2025-10-18 18:06:02] 2025-10-18 16:05:31,707 | INFO     | [data] copytool_out thread has finished
[2025-10-18 18:06:02] 2025-10-18 16:05:31,989 | INFO     | [job] control thread has finished
[2025-10-18 18:06:02] 2025-10-18 16:05:32,303 | INFO     | [payload] validate_post thread has finished
[2025-10-18 18:06:02] 2025-10-18 16:05:33,708 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 18:06:02] 2025-10-18 16:05:40,344 | INFO     | job.realtimelogging is not enabled
[2025-10-18 18:06:02] 2025-10-18 16:05:41,349 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 18:06:02] 2025-10-18 16:05:56,210 | INFO     | [monitor] cgroup control has ended
[2025-10-18 18:06:02] 2025-10-18 16:05:57,240 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139708238186304)>', '<ExcThread(monitor, started 139707300181760)>']
[2025-10-18 18:06:02] 2025-10-18 16:06:00,356 | INFO     | PID=3707075 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 18:06:02] 2025-10-18 16:06:00,356 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 18:06:02] 2025-10-18 16:06:00,356 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 18:06:02] 2025-10-18 16:06:00,356 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 18:06:02] 2025-10-18 16:06:00,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 18:06:02] 2025-10-18 16:06:00,357 | INFO     | [monitor] control thread has ended
[2025-10-18 18:06:02] 2025-10-18 16:06:02,266 | INFO     | all workflow threads have been joined
[2025-10-18 18:06:02] 2025-10-18 16:06:02,267 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 18:06:02] 2025-10-18 16:06:02,268 | INFO     | traces error code: 0
[2025-10-18 18:06:02] 2025-10-18 16:06:02,268 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 18:06:02] 2025-10-18 16:06:02,310 [wrapper] ==== pilot stdout END ====
[2025-10-18 18:06:02] 2025-10-18 16:06:02,312 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 18:06:02] 2025-10-18 16:06:02,315 [wrapper] pilotpid: 3707075
[2025-10-18 18:06:02] 2025-10-18 16:06:02,317 [wrapper] Pilot exit status: 0
[2025-10-18 18:06:02] 2025-10-18 16:06:02,324 [wrapper] pandaids: 6848008954
[2025-10-18 18:06:02] 2025-10-18 16:06:02,336 [wrapper] cleanup supervisor_pilot 3727705 3707076
[2025-10-18 18:06:02] 2025-10-18 16:06:02,338 [wrapper] Test setup, not cleaning
[2025-10-18 18:06:02] 2025-10-18 16:06:02,340 [wrapper] apfmon messages muted
[2025-10-18 18:06:02] 2025-10-18 16:06:02,342 [wrapper] ==== wrapper stdout END ====
[2025-10-18 18:06:02] 2025-10-18 16:06:02,344 [wrapper] ==== wrapper stderr END ====
[2025-10-18 18:06:02]  *** Error codes and diagnostics ***
[2025-10-18 18:06:02]     "exeErrorCode": 0,
[2025-10-18 18:06:02]     "exeErrorDiag": "",
[2025-10-18 18:06:02]     "pilotErrorCode": 0,
[2025-10-18 18:06:02]     "pilotErrorDiag": "",
[2025-10-18 18:06:02]  *** Listing of results directory ***
[2025-10-18 18:06:02] total 427504
[2025-10-18 18:06:02] -rw-r--r-- 1 boinc boinc    557409 Oct 17 22:59 pilot3.tar.gz
[2025-10-18 18:06:02] -rw-r--r-- 1 boinc boinc      5112 Oct 17 23:21 queuedata.json
[2025-10-18 18:06:02] -rwx------ 1 boinc boinc     36292 Oct 17 23:22 runpilot2-wrapper.sh
[2025-10-18 18:06:02] -rw-r--r-- 1 boinc boinc       100 Oct 18 15:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 18:06:02] -rwxr-xr-x 1 boinc boinc      7986 Oct 18 15:52 run_atlas
[2025-10-18 18:06:02] -rw-r--r-- 1 boinc boinc       105 Oct 18 15:52 job.xml
[2025-10-18 18:06:02] -rw-r--r-- 2 boinc boinc 229166671 Oct 18 15:52 EVNT.46771634._001388.pool.root.1
[2025-10-18 18:06:02] -rw-r--r-- 2 boinc boinc    569682 Oct 18 15:52 input.tar.gz
[2025-10-18 18:06:02] -rw-r--r-- 2 boinc boinc     15120 Oct 18 15:52 start_atlas.sh
[2025-10-18 18:06:02] drwxrwx--x 2 boinc boinc      4096 Oct 18 15:52 shared
[2025-10-18 18:06:02] -rw-r--r-- 1 boinc boinc         0 Oct 18 15:52 boinc_setup_complete
[2025-10-18 18:06:02] -rw-r--r-- 1 boinc boinc      6208 Oct 18 15:52 init_data.xml
[2025-10-18 18:06:02] -rw-r--r-- 1 boinc boinc         0 Oct 18 15:52 boinc_lockfile
[2025-10-18 18:06:02] -rw-r--r-- 1 boinc boinc      2558 Oct 18 15:52 pandaJob.out
[2025-10-18 18:06:02] -rw------- 1 boinc boinc    976742 Oct 18 15:52 agis_schedconf.cvmfs.json
[2025-10-18 18:06:02] -rw------- 1 boinc boinc   1560740 Oct 18 15:52 agis_ddmendpoints.agis.ALL.json
[2025-10-18 18:06:02] drwx------ 5 boinc boinc      4096 Oct 18 15:52 pilot3
[2025-10-18 18:06:02] -rw------- 1 boinc boinc 201833609 Oct 18 18:04 HITS.46771637._031774.pool.root.1
[2025-10-18 18:06:02] -rw-r--r-- 1 boinc boinc       529 Oct 18 18:04 boinc_task_state.xml
[2025-10-18 18:06:02] -rw------- 1 boinc boinc      1017 Oct 18 18:05 memory_monitor_summary.json
[2025-10-18 18:06:02] -rw------- 1 boinc boinc    290710 Oct 18 18:05 log.46771637._031774.job.log.tgz.1
[2025-10-18 18:06:02] -rw------- 1 boinc boinc        95 Oct 18 18:05 pilot_heartbeat.json
[2025-10-18 18:06:02] -rw------- 1 boinc boinc      7764 Oct 18 18:05 heartbeat.json
[2025-10-18 18:06:02] -rw-r--r-- 1 boinc boinc        27 Oct 18 18:05 wrapper_checkpoint.txt
[2025-10-18 18:06:02] -rw-r--r-- 1 boinc boinc      8192 Oct 18 18:05 boinc_mmap_file
[2025-10-18 18:06:02] -rw------- 1 boinc boinc      5010 Oct 18 18:06 pilotlog.txt
[2025-10-18 18:06:02] -rw------- 1 boinc boinc   1147131 Oct 18 18:06 log.46771637._031774.job.log.1
[2025-10-18 18:06:02] -rw------- 1 boinc boinc       357 Oct 18 18:06 output.list
[2025-10-18 18:06:02] -rw-r--r-- 1 boinc boinc       620 Oct 18 18:06 runtime_log
[2025-10-18 18:06:02] -rw------- 1 boinc boinc   1454080 Oct 18 18:06 result.tar.gz
[2025-10-18 18:06:02] -rw-r--r-- 1 boinc boinc      8797 Oct 18 18:06 runtime_log.err
[2025-10-18 18:06:02] -rw------- 1 boinc boinc       663 Oct 18 18:06 650LDmm56T8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGxuNDmdQy4Xn.diag
[2025-10-18 18:06:02] -rw-r--r-- 1 boinc boinc     10190 Oct 18 18:06 stderr.txt
[2025-10-18 18:06:02] HITS file was successfully produced:
[2025-10-18 18:06:02] -rw------- 1 boinc boinc 201833609 Oct 18 18:04 shared/HITS.pool.root.1
[2025-10-18 18:06:02]  *** Contents of shared directory: ***
[2025-10-18 18:06:02] total 422904
[2025-10-18 18:06:02] -rw-r--r-- 2 boinc boinc 229166671 Oct 18 15:52 ATLAS.root_0
[2025-10-18 18:06:02] -rw-r--r-- 2 boinc boinc    569682 Oct 18 15:52 input.tar.gz
[2025-10-18 18:06:02] -rw-r--r-- 2 boinc boinc     15120 Oct 18 15:52 start_atlas.sh
[2025-10-18 18:06:02] -rw------- 1 boinc boinc 201833609 Oct 18 18:04 HITS.pool.root.1
[2025-10-18 18:06:02] -rw------- 1 boinc boinc   1454080 Oct 18 18:06 result.tar.gz
18:06:03 (3703367): run_atlas exited; CPU time 15512.998637
18:06:03 (3703367): called boinc_finish(0)

</stderr_txt>
]]>

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