Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:36 (1706464): wrapper (7.7.26015): starting
00:03:37 (1706464): wrapper: running run_atlas (--nthreads 9)
[2025-10-18 00:03:37] Arguments: --nthreads 9
[2025-10-18 00:03:37] Threads: 9
[2025-10-18 00:03:37] Checking for CVMFS
[2025-10-18 00:03:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 00:03:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 00:03:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 00:03:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 00:03:39] 2.13.2.0 1756961 102563 313536 151838 2 267 19633148 32935936 18133 16776704 0 143525530 99.727 103269805 29456 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-18 00:03:39] CVMFS is ok
[2025-10-18 00:03:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 00:03:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 00:03:39] Further information can be found at the LHC@home message board.
[2025-10-18 00:03:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 00:03:39] Checking for apptainer binary...
[2025-10-18 00:03:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 00:03:39] Running /usr/bin/apptainer --version
[2025-10-18 00:03:40] apptainer version 1.4.3-1.el9
[2025-10-18 00:03:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 00:03:41] c-5-5.aglt2.org
[2025-10-18 00:03:41] apptainer works
[2025-10-18 00:03:41] Set ATHENA_PROC_NUMBER=9
[2025-10-18 00:03:41] Set ATHENA_CORE_NUMBER=9
[2025-10-18 00:03:41] Starting ATLAS job with PandaID=6848015391
[2025-10-18 00:03:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 09:45:21]  *** The last 200 lines of the pilot log: ***
[2025-10-18 09:45:21] 2025-10-18 13:44:18,699 | INFO     | intersect: -19612483360.951874
[2025-10-18 09:45:21] 2025-10-18 13:44:18,700 | INFO     | chi2: 9.39929890763738
[2025-10-18 09:45:21] 2025-10-18 13:44:18,701 | INFO     | sum of square deviations: 54156227358.70468
[2025-10-18 09:45:21] 2025-10-18 13:44:18,805 | INFO     | sum of deviations: 646579711773.7656
[2025-10-18 09:45:21] 2025-10-18 13:44:18,829 | INFO     | mean x: 1760777675.0876565
[2025-10-18 09:45:21] 2025-10-18 13:44:18,830 | INFO     | mean y: 2053587.8211091235
[2025-10-18 09:45:21] 2025-10-18 13:44:18,830 | INFO     | -- intersect: -21020147868.62629
[2025-10-18 09:45:21] 2025-10-18 13:44:18,830 | INFO     | intersect: -21020147868.62629
[2025-10-18 09:45:21] 2025-10-18 13:44:18,831 | INFO     | chi2: 8.731311003739224
[2025-10-18 09:45:21] 2025-10-18 13:44:18,831 | INFO     | current chi2=8.731311003739224 (change=7.106784351281608 %)
[2025-10-18 09:45:21] 2025-10-18 13:44:18,831 | INFO     | right removable region: 558
[2025-10-18 09:45:21] 2025-10-18 13:44:18,832 | INFO     | sum of square deviations: 54155856478.70459
[2025-10-18 09:45:21] 2025-10-18 13:44:18,853 | INFO     | sum of deviations: 466519671627.3626
[2025-10-18 09:45:21] 2025-10-18 13:44:18,854 | INFO     | mean x: 1760777980.0876565
[2025-10-18 09:45:21] 2025-10-18 13:44:18,854 | INFO     | mean y: 2066716.8497316637
[2025-10-18 09:45:21] 2025-10-18 13:44:18,854 | INFO     | -- intersect: -15165961608.991516
[2025-10-18 09:45:21] 2025-10-18 13:44:18,854 | INFO     | intersect: -15165961608.991516
[2025-10-18 09:45:21] 2025-10-18 13:44:18,855 | INFO     | chi2: 5.387330391672037
[2025-10-18 09:45:21] 2025-10-18 13:44:18,855 | INFO     | current chi2=5.387330391672037 (change=42.683699660890944 %)
[2025-10-18 09:45:21] 2025-10-18 13:44:18,856 | INFO     | sum of square deviations: 52715308625.804955
[2025-10-18 09:45:21] 2025-10-18 13:44:18,881 | INFO     | sum of deviations: 358932386051.08685
[2025-10-18 09:45:21] 2025-10-18 13:44:18,882 | INFO     | mean x: 1760778132.5920577
[2025-10-18 09:45:21] 2025-10-18 13:44:18,882 | INFO     | mean y: 2078100.2924187726
[2025-10-18 09:45:21] 2025-10-18 13:44:18,882 | INFO     | -- intersect: -11986854771.637508
[2025-10-18 09:45:21] 2025-10-18 13:44:18,882 | INFO     | intersect: -11986854771.637508
[2025-10-18 09:45:21] 2025-10-18 13:44:18,893 | INFO     | chi2: 3.5403764887690983
[2025-10-18 09:45:21] 2025-10-18 13:44:18,903 | INFO     | current chi2=3.5403764887690983 (change=34.28328631483301 %)
[2025-10-18 09:45:21] 2025-10-18 13:44:18,904 | INFO     | sum of square deviations: 51300563225.07471
[2025-10-18 09:45:21] 2025-10-18 13:44:18,944 | INFO     | sum of deviations: 279270238251.35187
[2025-10-18 09:45:21] 2025-10-18 13:44:18,944 | INFO     | mean x: 1760778285.0947177
[2025-10-18 09:45:21] 2025-10-18 13:44:18,944 | INFO     | mean y: 2086680.3970856103
[2025-10-18 09:45:21] 2025-10-18 13:44:18,945 | INFO     | -- intersect: -9583246116.609306
[2025-10-18 09:45:21] 2025-10-18 13:44:18,945 | INFO     | intersect: -9583246116.609306
[2025-10-18 09:45:21] 2025-10-18 13:44:18,946 | INFO     | chi2: 2.5509968366005262
[2025-10-18 09:45:21] 2025-10-18 13:44:18,946 | INFO     | current chi2=2.5509968366005262 (change=27.945605652594168 %)
[2025-10-18 09:45:21] 2025-10-18 13:44:18,951 | INFO     | sum of square deviations: 49911386429.02945
[2025-10-18 09:45:21] 2025-10-18 13:44:18,968 | INFO     | sum of deviations: 215681274186.52948
[2025-10-18 09:45:21] 2025-10-18 13:44:18,968 | INFO     | mean x: 1760778437.5955882
[2025-10-18 09:45:21] 2025-10-18 13:44:18,968 | INFO     | mean y: 2093659.7205882352
[2025-10-18 09:45:21] 2025-10-18 13:44:18,968 | INFO     | -- intersect: -7606729980.568094
[2025-10-18 09:45:21] 2025-10-18 13:44:18,968 | INFO     | intersect: -7606729980.568094
[2025-10-18 09:45:21] 2025-10-18 13:44:18,969 | INFO     | chi2: 1.9543503675199827
[2025-10-18 09:45:21] 2025-10-18 13:44:18,969 | INFO     | current chi2=1.9543503675199827 (change=23.388757701308567 %)
[2025-10-18 09:45:21] 2025-10-18 13:44:18,970 | INFO     | left removable region: 40
[2025-10-18 09:45:21] 2025-10-18 13:44:18,974 | INFO     | sum of square deviations: 43090658053.87085
[2025-10-18 09:45:21] 2025-10-18 13:44:19,010 | INFO     | sum of deviations: 135073125323.72191
[2025-10-18 09:45:21] 2025-10-18 13:44:19,011 | INFO     | mean x: 1760778864.604247
[2025-10-18 09:45:21] 2025-10-18 13:44:19,011 | INFO     | mean y: 2109567.6718146717
[2025-10-18 09:45:21] 2025-10-18 13:44:19,011 | INFO     | -- intersect: -5517274795.145674
[2025-10-18 09:45:21] 2025-10-18 13:44:19,011 | INFO     | intersect: -5517274795.145674
[2025-10-18 09:45:21] 2025-10-18 13:44:19,012 | INFO     | chi2: 0.5559002591191744
[2025-10-18 09:45:21] 2025-10-18 13:44:19,012 | INFO     | -- intersect: -5517274795.145674
[2025-10-18 09:45:21] 2025-10-18 13:44:19,012 | INFO     | current memory leak: 3.13 B/s (using 518 data points, chi2=0.56)
[2025-10-18 09:45:21] 2025-10-18 13:44:19,013 | INFO     | could have reported an average CPU frequency of 2600 MHz (22 samples)
[2025-10-18 09:45:21] 2025-10-18 13:44:19,013 | INFO     | ..............................
[2025-10-18 09:45:21] 2025-10-18 13:44:19,014 | INFO     | . Timing measurements:
[2025-10-18 09:45:21] 2025-10-18 13:44:19,014 | INFO     | . get job = 0 s
[2025-10-18 09:45:21] 2025-10-18 13:44:19,014 | INFO     | . initial setup = 10 s
[2025-10-18 09:45:21] 2025-10-18 13:44:19,014 | INFO     | . payload setup = 86 s
[2025-10-18 09:45:21] 2025-10-18 13:44:19,014 | INFO     | . stage-in = 1 s
[2025-10-18 09:45:21] 2025-10-18 13:44:19,026 | INFO     | . payload execution = 34419 s
[2025-10-18 09:45:21] 2025-10-18 13:44:19,027 | INFO     | . stage-out = 9 s
[2025-10-18 09:45:21] 2025-10-18 13:44:19,027 | INFO     | . log creation = 3 s
[2025-10-18 09:45:21] 2025-10-18 13:44:19,027 | INFO     | ..............................
[2025-10-18 09:45:21] 2025-10-18 13:44:20,047 | INFO     | time since job start (34694s) is within the limit (172800.0s)
[2025-10-18 09:45:21] 2025-10-18 13:44:20,255 | INFO     | 
[2025-10-18 09:45:21] 2025-10-18 13:44:20,256 | INFO     | job summary report
[2025-10-18 09:45:21] 2025-10-18 13:44:20,256 | INFO     | --------------------------------------------------
[2025-10-18 09:45:21] 2025-10-18 13:44:20,256 | INFO     | PanDA job id: 6848015391
[2025-10-18 09:45:21] 2025-10-18 13:44:20,256 | INFO     | task id: 46771637
[2025-10-18 09:45:21] 2025-10-18 13:44:20,256 | INFO     | errors: (none)
[2025-10-18 09:45:21] 2025-10-18 13:44:20,256 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 09:45:21] 2025-10-18 13:44:20,256 | INFO     | pilot state: finished 
[2025-10-18 09:45:21] 2025-10-18 13:44:20,256 | INFO     | transexitcode: 0
[2025-10-18 09:45:21] 2025-10-18 13:44:20,256 | INFO     | exeerrorcode: 0
[2025-10-18 09:45:21] 2025-10-18 13:44:20,256 | INFO     | exeerrordiag: 
[2025-10-18 09:45:21] 2025-10-18 13:44:20,257 | INFO     | exitcode: 0
[2025-10-18 09:45:21] 2025-10-18 13:44:20,257 | INFO     | exitmsg: OK
[2025-10-18 09:45:21] 2025-10-18 13:44:20,257 | INFO     | cpuconsumptiontime: 54809 s
[2025-10-18 09:45:21] 2025-10-18 13:44:20,258 | INFO     | nevents: 400
[2025-10-18 09:45:21] 2025-10-18 13:44:20,258 | INFO     | neventsw: 0
[2025-10-18 09:45:21] 2025-10-18 13:44:20,258 | INFO     | pid: 1736471
[2025-10-18 09:45:21] 2025-10-18 13:44:20,258 | INFO     | pgrp: 1736471
[2025-10-18 09:45:21] 2025-10-18 13:44:20,258 | INFO     | corecount: 9
[2025-10-18 09:45:21] 2025-10-18 13:44:20,258 | INFO     | event service: False
[2025-10-18 09:45:21] 2025-10-18 13:44:20,259 | INFO     | sizes: {0: 2348101, 1: 2348786, 2: 2348814, 3: 2349013, 14: 2349013, 26: 2349041, 38: 2349197, 49: 2349225, 61: 2349253, 64: 2349543, 74: 2349599, 34512: 2389681, 
[2025-10-18 09:45:21] 2025-10-18 13:44:20,259 | INFO     | --------------------------------------------------
[2025-10-18 09:45:21] 2025-10-18 13:44:20,259 | INFO     | 
[2025-10-18 09:45:21] 2025-10-18 13:44:20,259 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-18 09:45:21] 2025-10-18 13:44:20,417 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,417 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,417 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,417 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,419 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,419 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,419 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,419 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 09:45:21] 2025-10-18 13:44:20,419 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,419 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 09:45:21] 2025-10-18 13:44:20,419 | INFO     | job 6848015391 has completed (purged errors)
[2025-10-18 09:45:21] 2025-10-18 13:44:20,420 | INFO     | overall cleanup function is called
[2025-10-18 09:45:21] 2025-10-18 13:44:21,435 | INFO     | --- collectZombieJob: --- 10, [1736471]
[2025-10-18 09:45:21] 2025-10-18 13:44:21,436 | INFO     | zombie collector waiting for pid 1736471
[2025-10-18 09:45:21] 2025-10-18 13:44:21,436 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 09:45:21] 2025-10-18 13:44:21,436 | INFO     | collected zombie processes
[2025-10-18 09:45:21] 2025-10-18 13:44:21,436 | INFO     | will attempt to kill all subprocesses of pid=1736471
[2025-10-18 09:45:21] 2025-10-18 13:44:23,001 | INFO     | process IDs to be killed: [1736471] (in reverse order)
[2025-10-18 09:45:21] 2025-10-18 13:44:23,143 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 09:45:21] 2025-10-18 13:44:23,144 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 09:45:21] 2025-10-18 13:44:23,273 | INFO     | did not find any defunct processes belonging to 1736471
[2025-10-18 09:45:21] 2025-10-18 13:44:23,427 | INFO     | did not find any defunct processes belonging to 1736471
[2025-10-18 09:45:21] 2025-10-18 13:44:23,428 | INFO     | ready for new job
[2025-10-18 09:45:21] 2025-10-18 13:44:23,429 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 09:45:21] 2025-10-18 13:44:23,455 | INFO     | ***************************************
[2025-10-18 09:45:21] 2025-10-18 13:44:23,455 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 09:45:21] 2025-10-18 13:44:23,455 | INFO     | ***************************************
[2025-10-18 09:45:21] 2025-10-18 13:44:23,455 | INFO     | 
[2025-10-18 09:45:21] 2025-10-18 13:44:23,473 | INFO     | architecture information:
[2025-10-18 09:45:21] 2025-10-18 13:44:23,482 | INFO     | executing command: cat /etc/os-release
[2025-10-18 09:45:21] 2025-10-18 13:44:23,622 | INFO     | cat /etc/os-release:
[2025-10-18 09:45:21] NAME="CentOS Linux"
[2025-10-18 09:45:21] VERSION="7 (Core)"
[2025-10-18 09:45:21] ID="centos"
[2025-10-18 09:45:21] ID_LIKE="rhel fedora"
[2025-10-18 09:45:21] VERSION_ID="7"
[2025-10-18 09:45:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 09:45:21] ANSI_COLOR="0;31"
[2025-10-18 09:45:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 09:45:21] HOME_URL="https://www.centos.org/"
[2025-10-18 09:45:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 09:45:21] 
[2025-10-18 09:45:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 09:45:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 09:45:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 09:45:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 09:45:21] 
[2025-10-18 09:45:21] 2025-10-18 13:44:23,623 | INFO     | ***************************************
[2025-10-18 09:45:21] 2025-10-18 13:44:24,163 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-18 09:45:21] 2025-10-18 13:44:24,304 | INFO     | sufficient remaining disk space (75649515520 B)
[2025-10-18 09:45:21] 2025-10-18 13:44:24,305 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 09:45:21] 2025-10-18 13:44:24,305 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 09:45:21] 2025-10-18 13:44:24,305 | INFO     | update_server=False
[2025-10-18 09:45:21] 2025-10-18 13:44:24,305 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 09:45:21] 2025-10-18 13:44:24,305 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 09:45:21] 2025-10-18 13:44:24,637 | INFO     | all data control threads have been joined
[2025-10-18 09:45:21] 2025-10-18 13:44:25,140 | INFO     | all payload control threads have been joined
[2025-10-18 09:45:21] 2025-10-18 13:44:25,297 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 09:45:21] 2025-10-18 13:44:25,298 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 09:45:21] 2025-10-18 13:44:25,304 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 09:45:21] 2025-10-18 13:44:25,305 | INFO     | aborting loop
[2025-10-18 09:45:21] 2025-10-18 13:44:25,313 | INFO     | [job] retrieve thread has finished
[2025-10-18 09:45:21] 2025-10-18 13:44:25,408 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 09:45:21] 2025-10-18 13:44:25,591 | INFO     | all job control threads have been joined
[2025-10-18 09:45:21] 2025-10-18 13:44:25,650 | INFO     | [data] control thread has finished
[2025-10-18 09:45:21] 2025-10-18 13:44:25,688 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 09:45:21] 2025-10-18 13:44:26,024 | INFO     | [payload] failed_post thread has finished
[2025-10-18 09:45:21] 2025-10-18 13:44:26,035 | INFO     | [payload] validate_post thread has finished
[2025-10-18 09:45:21] 2025-10-18 13:44:26,146 | INFO     | [payload] control thread has finished
[2025-10-18 09:45:21] 2025-10-18 13:44:26,250 | INFO     | [data] copytool_in thread has finished
[2025-10-18 09:45:21] 2025-10-18 13:44:26,306 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 09:45:21] 2025-10-18 13:44:26,307 | INFO     | [job] queue monitor thread has finished
[2025-10-18 09:45:21] 2025-10-18 13:44:26,311 | INFO     | [job] job monitor thread has finished
[2025-10-18 09:45:21] 2025-10-18 13:44:26,601 | INFO     | [job] control thread has finished
[2025-10-18 09:45:21] 2025-10-18 13:44:26,702 | INFO     | [job] validate thread has finished
[2025-10-18 09:45:21] 2025-10-18 13:44:26,827 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 09:45:21] 2025-10-18 13:44:27,372 | INFO     | [data] copytool_out thread has finished
[2025-10-18 09:45:21] 2025-10-18 13:44:28,375 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 09:45:21] 2025-10-18 13:44:55,151 | INFO     | PID=1716879 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 09:45:21] 2025-10-18 13:44:55,152 | INFO     | .. there are 41 such processes running
[2025-10-18 09:45:21] 2025-10-18 13:44:55,154 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 09:45:21] 2025-10-18 13:44:55,154 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 09:45:21] 2025-10-18 13:44:55,154 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 09:45:21] 2025-10-18 13:45:11,673 | INFO     | [monitor] cgroup control has ended
[2025-10-18 09:45:21] 2025-10-18 13:45:13,663 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139855692232512)>', '<ExcThread(monitor, started 139855048722176)>']
[2025-10-18 09:45:21] 2025-10-18 13:45:14,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 09:45:21] 2025-10-18 13:45:14,468 | INFO     | [monitor] control thread has ended
[2025-10-18 09:45:21] 2025-10-18 13:45:18,689 | INFO     | all workflow threads have been joined
[2025-10-18 09:45:21] 2025-10-18 13:45:18,690 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 09:45:21] 2025-10-18 13:45:18,690 | INFO     | traces error code: 0
[2025-10-18 09:45:21] 2025-10-18 13:45:18,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 09:45:21] 2025-10-18 13:45:19,406 [wrapper] ==== pilot stdout END ====
[2025-10-18 09:45:21] 2025-10-18 13:45:19,430 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 09:45:21] 2025-10-18 13:45:19,470 [wrapper] pilotpid: 1716879
[2025-10-18 09:45:21] 2025-10-18 13:45:19,496 [wrapper] Pilot exit status: 0
[2025-10-18 09:45:21] 2025-10-18 13:45:19,625 [wrapper] pandaids: 6848015391
[2025-10-18 09:45:21] 2025-10-18 13:45:19,946 [wrapper] cleanup supervisor_pilot 3789605 1716880
[2025-10-18 09:45:21] 2025-10-18 13:45:19,952 [wrapper] Test setup, not cleaning
[2025-10-18 09:45:21] 2025-10-18 13:45:19,956 [wrapper] apfmon messages muted
[2025-10-18 09:45:21] 2025-10-18 13:45:19,959 [wrapper] ==== wrapper stdout END ====
[2025-10-18 09:45:21] 2025-10-18 13:45:19,962 [wrapper] ==== wrapper stderr END ====
[2025-10-18 09:45:21]  *** Error codes and diagnostics ***
[2025-10-18 09:45:21]     "exeErrorCode": 0,
[2025-10-18 09:45:21]     "exeErrorDiag": "",
[2025-10-18 09:45:21]     "pilotErrorCode": 0,
[2025-10-18 09:45:21]     "pilotErrorDiag": "",
[2025-10-18 09:45:21]  *** Listing of results directory ***
[2025-10-18 09:45:21] total 436168
[2025-10-18 09:45:21] -rw-r--r--. 1 boincer umatlas    557409 Oct 17 19:20 pilot3.tar.gz
[2025-10-18 09:45:21] -rw-r--r--. 1 boincer umatlas      5112 Oct 17 19:21 queuedata.json
[2025-10-18 09:45:21] -rwx------. 1 boincer umatlas     36292 Oct 17 19:22 runpilot2-wrapper.sh
[2025-10-18 09:45:21] -rw-r--r--. 1 boincer umatlas       100 Oct 18 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 09:45:21] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 18 00:03 run_atlas
[2025-10-18 09:45:21] -rw-r--r--. 1 boincer umatlas       105 Oct 18 00:03 job.xml
[2025-10-18 09:45:21] -rw-r--r--. 2 boincer umatlas 229002731 Oct 18 00:03 EVNT.46771634._001484.pool.root.1
[2025-10-18 09:45:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 18 00:03 start_atlas.sh
[2025-10-18 09:45:21] drwxrwx--x. 2 boincer umatlas      4096 Oct 18 00:03 shared
[2025-10-18 09:45:21] -rw-r--r--. 2 boincer umatlas    569680 Oct 18 00:03 input.tar.gz
[2025-10-18 09:45:21] -rw-r--r--. 1 boincer umatlas         0 Oct 18 00:03 boinc_lockfile
[2025-10-18 09:45:21] -rw-r--r--. 1 boincer umatlas      2558 Oct 18 00:03 pandaJob.out
[2025-10-18 09:45:21] -rw-------. 1 boincer umatlas    976741 Oct 18 00:05 agis_schedconf.cvmfs.json
[2025-10-18 09:45:21] drwx------. 5 boincer umatlas      4096 Oct 18 00:06 pilot3
[2025-10-18 09:45:21] -rw-r--r--. 1 boincer umatlas      6658 Oct 18 09:39 init_data.xml
[2025-10-18 09:45:21] -rw-------. 1 boincer umatlas 203943231 Oct 18 09:42 HITS.46771637._033632.pool.root.1
[2025-10-18 09:45:21] -rw-r--r--. 1 boincer umatlas       531 Oct 18 09:42 boinc_task_state.xml
[2025-10-18 09:45:21] -rw-------. 1 boincer umatlas      1049 Oct 18 09:43 memory_monitor_summary.json
[2025-10-18 09:45:21] -rw-------. 1 boincer umatlas   1560740 Oct 18 09:43 agis_ddmendpoints.agis.ALL.json
[2025-10-18 09:45:21] -rw-------. 1 boincer umatlas    744452 Oct 18 09:43 log.46771637._033632.job.log.tgz.1
[2025-10-18 09:45:21] -rw-------. 1 boincer umatlas      7838 Oct 18 09:44 heartbeat.json
[2025-10-18 09:45:21] -rw-------. 1 boincer umatlas        95 Oct 18 09:44 pilot_heartbeat.json
[2025-10-18 09:45:21] -rw-r--r--. 1 boincer umatlas        28 Oct 18 09:45 wrapper_checkpoint.txt
[2025-10-18 09:45:21] -rw-------. 1 boincer umatlas      4824 Oct 18 09:45 pilotlog.txt
[2025-10-18 09:45:21] -rw-------. 1 boincer umatlas   4150048 Oct 18 09:45 log.46771637._033632.job.log.1
[2025-10-18 09:45:21] -rw-------. 1 boincer umatlas       357 Oct 18 09:45 output.list
[2025-10-18 09:45:21] -rw-r--r--. 1 boincer umatlas       620 Oct 18 09:45 runtime_log
[2025-10-18 09:45:21] -rw-------. 1 boincer umatlas   4915200 Oct 18 09:45 result.tar.gz
[2025-10-18 09:45:21] -rw-------. 1 boincer umatlas       656 Oct 18 09:45 TcdNDmDx8T8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXIvNDmXsveHm.diag
[2025-10-18 09:45:21] -rw-r--r--. 1 boincer umatlas      8689 Oct 18 09:45 runtime_log.err
[2025-10-18 09:45:21] -rw-r--r--. 1 boincer umatlas      8192 Oct 18 09:45 boinc_mmap_file
[2025-10-18 09:45:21] -rw-r--r--. 1 boincer umatlas     21062 Oct 18 09:45 stderr.txt
[2025-10-18 09:45:21] HITS file was successfully produced:
[2025-10-18 09:45:21] -rw-------. 1 boincer umatlas 203943231 Oct 18 09:42 shared/HITS.pool.root.1
[2025-10-18 09:45:21]  *** Contents of shared directory: ***
[2025-10-18 09:45:21] total 428180
[2025-10-18 09:45:21] -rw-r--r--. 2 boincer umatlas 229002731 Oct 18 00:03 ATLAS.root_0
[2025-10-18 09:45:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 18 00:03 start_atlas.sh
[2025-10-18 09:45:21] -rw-r--r--. 2 boincer umatlas    569680 Oct 18 00:03 input.tar.gz
[2025-10-18 09:45:21] -rw-------. 1 boincer umatlas 203943231 Oct 18 09:42 HITS.pool.root.1
[2025-10-18 09:45:21] -rw-------. 1 boincer umatlas   4915200 Oct 18 09:45 result.tar.gz
09:45:43 (1706464): run_atlas exited; CPU time 56344.506324
09:45:43 (1706464): called boinc_finish(0)

</stderr_txt>
]]>

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