Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:42 (1706766): wrapper (7.7.26015): starting
00:03:42 (1706766): wrapper: running run_atlas (--nthreads 9)
[2025-10-18 00:03:42] Arguments: --nthreads 9
[2025-10-18 00:03:42] Threads: 9
[2025-10-18 00:03:42] Checking for CVMFS
[2025-10-18 00:03:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 00:03:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 00:03:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 00:03:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 00:03:46] 2.13.2.0 1756961 102563 313536 151838 2 267 19633148 32935936 18152 16776704 0 143525791 99.727 103269805 29456 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-18 00:03:46] CVMFS is ok
[2025-10-18 00:03:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 00:03:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 00:03:47] Further information can be found at the LHC@home message board.
[2025-10-18 00:03:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 00:03:47] Checking for apptainer binary...
[2025-10-18 00:03:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 00:03:47] Running /usr/bin/apptainer --version
[2025-10-18 00:03:47] apptainer version 1.4.3-1.el9
[2025-10-18 00:03:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 00:03:49] c-5-5.aglt2.org
[2025-10-18 00:03:49] apptainer works
[2025-10-18 00:03:49] Set ATHENA_PROC_NUMBER=9
[2025-10-18 00:03:49] Set ATHENA_CORE_NUMBER=9
[2025-10-18 00:03:49] Starting ATLAS job with PandaID=6849452406
[2025-10-18 00:03:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 06:31:46]  *** The last 200 lines of the pilot log: ***
[2025-10-18 06:31:46] 2025-10-18 09:39:27,139 | INFO     | -- intersect: -38464167842.6551
[2025-10-18 06:31:46] 2025-10-18 09:39:27,139 | INFO     | intersect: -38464167842.6551
[2025-10-18 06:31:46] 2025-10-18 09:39:27,139 | INFO     | chi2: 4.124835114773879
[2025-10-18 06:31:46] 2025-10-18 09:39:27,140 | INFO     | current chi2=4.124835114773879 (change=50.1076704158443 %)
[2025-10-18 06:31:46] 2025-10-18 09:39:27,140 | INFO     | sum of square deviations: 9507700338.0
[2025-10-18 06:31:46] 2025-10-18 09:39:27,147 | INFO     | sum of deviations: 155642568653.9999
[2025-10-18 06:31:46] 2025-10-18 09:39:27,147 | INFO     | mean x: 1760770778.0
[2025-10-18 06:31:46] 2025-10-18 09:39:27,147 | INFO     | mean y: 2091361.9169329074
[2025-10-18 06:31:46] 2025-10-18 09:39:27,147 | INFO     | -- intersect: -28822006680.33058
[2025-10-18 06:31:46] 2025-10-18 09:39:27,147 | INFO     | intersect: -28822006680.33058
[2025-10-18 06:31:46] 2025-10-18 09:39:27,148 | INFO     | chi2: 2.2571297365736385
[2025-10-18 06:31:46] 2025-10-18 09:39:27,148 | INFO     | current chi2=2.2571297365736385 (change=45.27951605897408 %)
[2025-10-18 06:31:46] 2025-10-18 09:39:27,149 | INFO     | sum of square deviations: 9059225834.986961
[2025-10-18 06:31:46] 2025-10-18 09:39:27,153 | INFO     | sum of deviations: 115245937268.24669
[2025-10-18 06:31:46] 2025-10-18 09:39:27,153 | INFO     | mean x: 1760770930.5064936
[2025-10-18 06:31:46] 2025-10-18 09:39:27,154 | INFO     | mean y: 2105084.6266233767
[2025-10-18 06:31:46] 2025-10-18 09:39:27,154 | INFO     | -- intersect: -22397347130.94956
[2025-10-18 06:31:46] 2025-10-18 09:39:27,154 | INFO     | intersect: -22397347130.94956
[2025-10-18 06:31:46] 2025-10-18 09:39:27,154 | INFO     | chi2: 1.5117416311245124
[2025-10-18 06:31:46] 2025-10-18 09:39:27,155 | INFO     | current chi2=1.5117416311245124 (change=33.02371562303893 %)
[2025-10-18 06:31:46] 2025-10-18 09:39:27,155 | INFO     | sum of square deviations: 8625133906.996683
[2025-10-18 06:31:46] 2025-10-18 09:39:27,162 | INFO     | sum of deviations: 79719406822.00333
[2025-10-18 06:31:46] 2025-10-18 09:39:27,162 | INFO     | mean x: 1760771083.0033004
[2025-10-18 06:31:46] 2025-10-18 09:39:27,162 | INFO     | mean y: 2117560.99669967
[2025-10-18 06:31:46] 2025-10-18 09:39:27,162 | INFO     | -- intersect: -16272137169.413187
[2025-10-18 06:31:46] 2025-10-18 09:39:27,162 | INFO     | intersect: -16272137169.413187
[2025-10-18 06:31:46] 2025-10-18 09:39:27,163 | INFO     | chi2: 0.93563907870915
[2025-10-18 06:31:46] 2025-10-18 09:39:27,163 | INFO     | current chi2=0.93563907870915 (change=38.10853260598686 %)
[2025-10-18 06:31:46] 2025-10-18 09:39:27,168 | INFO     | sum of square deviations: 8205171864.486565
[2025-10-18 06:31:46] 2025-10-18 09:39:27,170 | INFO     | sum of deviations: 53793728788.98999
[2025-10-18 06:31:46] 2025-10-18 09:39:27,170 | INFO     | mean x: 1760771235.4932885
[2025-10-18 06:31:46] 2025-10-18 09:39:27,171 | INFO     | mean y: 2126959.244966443
[2025-10-18 06:31:46] 2025-10-18 09:39:27,171 | INFO     | -- intersect: -11541622747.14924
[2025-10-18 06:31:46] 2025-10-18 09:39:27,171 | INFO     | intersect: -11541622747.14924
[2025-10-18 06:31:46] 2025-10-18 09:39:27,175 | INFO     | chi2: 0.6156174642700017
[2025-10-18 06:31:46] 2025-10-18 09:39:27,176 | INFO     | current chi2=0.6156174642700017 (change=34.203532293741354 %)
[2025-10-18 06:31:46] 2025-10-18 09:39:27,176 | INFO     | sum of square deviations: 7799089085.87712
[2025-10-18 06:31:46] 2025-10-18 09:39:27,179 | INFO     | sum of deviations: 36475377570.720146
[2025-10-18 06:31:46] 2025-10-18 09:39:27,182 | INFO     | mean x: 1760771387.9795222
[2025-10-18 06:31:46] 2025-10-18 09:39:27,183 | INFO     | mean y: 2133467.2866894198
[2025-10-18 06:31:46] 2025-10-18 09:39:27,183 | INFO     | -- intersect: -8232777108.177142
[2025-10-18 06:31:46] 2025-10-18 09:39:27,183 | INFO     | intersect: -8232777108.177142
[2025-10-18 06:31:46] 2025-10-18 09:39:27,183 | INFO     | chi2: 0.47641932439283474
[2025-10-18 06:31:46] 2025-10-18 09:39:27,184 | INFO     | current chi2=0.47641932439283474 (change=22.61114213876761 %)
[2025-10-18 06:31:46] 2025-10-18 09:39:27,184 | INFO     | left removable region: 60
[2025-10-18 06:31:46] 2025-10-18 09:39:27,184 | INFO     | sum of square deviations: 5263086497.859921
[2025-10-18 06:31:46] 2025-10-18 09:39:27,186 | INFO     | sum of deviations: 13918284268.334633
[2025-10-18 06:31:46] 2025-10-18 09:39:27,186 | INFO     | mean x: 1760772119.9766538
[2025-10-18 06:31:46] 2025-10-18 09:39:27,187 | INFO     | mean y: 2141279.3891050583
[2025-10-18 06:31:46] 2025-10-18 09:39:27,187 | INFO     | -- intersect: -4654237996.831854
[2025-10-18 06:31:46] 2025-10-18 09:39:27,187 | INFO     | intersect: -4654237996.831854
[2025-10-18 06:31:46] 2025-10-18 09:39:27,187 | INFO     | chi2: 0.11582354585773767
[2025-10-18 06:31:46] 2025-10-18 09:39:27,187 | INFO     | -- intersect: -4654237996.831854
[2025-10-18 06:31:46] 2025-10-18 09:39:27,188 | INFO     | current memory leak: 2.64 B/s (using 257 data points, chi2=0.12)
[2025-10-18 06:31:46] 2025-10-18 09:39:27,189 | INFO     | could have reported an average CPU frequency of 2600 MHz (14 samples)
[2025-10-18 06:31:46] 2025-10-18 09:39:27,189 | INFO     | ..............................
[2025-10-18 06:31:46] 2025-10-18 09:39:27,189 | INFO     | . Timing measurements:
[2025-10-18 06:31:46] 2025-10-18 09:39:27,189 | INFO     | . get job = 0 s
[2025-10-18 06:31:46] 2025-10-18 09:39:27,190 | INFO     | . initial setup = 13 s
[2025-10-18 06:31:46] 2025-10-18 09:39:27,190 | INFO     | . payload setup = 85 s
[2025-10-18 06:31:46] 2025-10-18 09:39:27,191 | INFO     | . stage-in = 0 s
[2025-10-18 06:31:46] 2025-10-18 09:39:27,191 | INFO     | . payload execution = 19758 s
[2025-10-18 06:31:46] 2025-10-18 09:39:27,191 | INFO     | . stage-out = 3 s
[2025-10-18 06:31:46] 2025-10-18 09:39:27,191 | INFO     | . log creation = 0 s
[2025-10-18 06:31:46] 2025-10-18 09:39:27,191 | INFO     | ..............................
[2025-10-18 06:31:46] 2025-10-18 09:39:27,448 | INFO     | 
[2025-10-18 06:31:46] 2025-10-18 09:39:27,449 | INFO     | job summary report
[2025-10-18 06:31:46] 2025-10-18 09:39:27,449 | INFO     | --------------------------------------------------
[2025-10-18 06:31:46] 2025-10-18 09:39:27,449 | INFO     | PanDA job id: 6849452406
[2025-10-18 06:31:46] 2025-10-18 09:39:27,449 | INFO     | task id: 46808902
[2025-10-18 06:31:46] 2025-10-18 09:39:27,449 | INFO     | errors: (none)
[2025-10-18 06:31:46] 2025-10-18 09:39:27,449 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 06:31:46] 2025-10-18 09:39:27,449 | INFO     | pilot state: finished 
[2025-10-18 06:31:46] 2025-10-18 09:39:27,449 | INFO     | transexitcode: 0
[2025-10-18 06:31:46] 2025-10-18 09:39:27,450 | INFO     | exeerrorcode: 0
[2025-10-18 06:31:46] 2025-10-18 09:39:27,450 | INFO     | exeerrordiag: 
[2025-10-18 06:31:46] 2025-10-18 09:39:27,450 | INFO     | exitcode: 0
[2025-10-18 06:31:46] 2025-10-18 09:39:27,450 | INFO     | exitmsg: OK
[2025-10-18 06:31:46] 2025-10-18 09:39:27,450 | INFO     | cpuconsumptiontime: 39550 s
[2025-10-18 06:31:46] 2025-10-18 09:39:27,450 | INFO     | nevents: 400
[2025-10-18 06:31:46] 2025-10-18 09:39:27,450 | INFO     | neventsw: 0
[2025-10-18 06:31:46] 2025-10-18 09:39:27,450 | INFO     | pid: 1736327
[2025-10-18 06:31:46] 2025-10-18 09:39:27,450 | INFO     | pgrp: 1736327
[2025-10-18 06:31:46] 2025-10-18 09:39:27,450 | INFO     | corecount: 9
[2025-10-18 06:31:46] 2025-10-18 09:39:27,451 | INFO     | event service: False
[2025-10-18 06:31:46] 2025-10-18 09:39:27,451 | INFO     | sizes: {0: 2348610, 1: 2348694, 2: 2348694, 3: 2348865, 4: 2348893, 16: 2348921, 28: 2349077, 40: 2349105, 51: 2349133, 60: 2349423, 63: 2349451, 19847: 2382033, 1
[2025-10-18 06:31:46] 2025-10-18 09:39:27,451 | INFO     | --------------------------------------------------
[2025-10-18 06:31:46] 2025-10-18 09:39:27,451 | INFO     | 
[2025-10-18 06:31:46] 2025-10-18 09:39:27,451 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-18 06:31:46] 2025-10-18 09:39:27,537 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,537 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,539 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,540 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,540 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,540 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,540 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,543 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,543 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,544 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 06:31:46] 2025-10-18 09:39:27,545 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,545 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 06:31:46] 2025-10-18 09:39:27,545 | INFO     | job 6849452406 has completed (purged errors)
[2025-10-18 06:31:46] 2025-10-18 09:39:27,545 | INFO     | overall cleanup function is called
[2025-10-18 06:31:46] 2025-10-18 09:39:28,566 | INFO     | --- collectZombieJob: --- 10, [1736327]
[2025-10-18 06:31:46] 2025-10-18 09:39:28,567 | INFO     | zombie collector waiting for pid 1736327
[2025-10-18 06:31:46] 2025-10-18 09:39:28,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 06:31:46] 2025-10-18 09:39:28,567 | INFO     | collected zombie processes
[2025-10-18 06:31:46] 2025-10-18 09:39:28,567 | INFO     | will attempt to kill all subprocesses of pid=1736327
[2025-10-18 06:31:46] 2025-10-18 09:39:30,261 | INFO     | process IDs to be killed: [1736327] (in reverse order)
[2025-10-18 06:31:46] 2025-10-18 09:39:30,572 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 06:31:46] 2025-10-18 09:39:30,573 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 06:31:46] 2025-10-18 09:39:30,755 | INFO     | did not find any defunct processes belonging to 1736327
[2025-10-18 06:31:46] 2025-10-18 09:39:31,007 | INFO     | did not find any defunct processes belonging to 1736327
[2025-10-18 06:31:46] 2025-10-18 09:39:31,007 | INFO     | ready for new job
[2025-10-18 06:31:46] 2025-10-18 09:39:31,007 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 06:31:46] 2025-10-18 09:39:31,106 | INFO     | ***************************************
[2025-10-18 06:31:46] 2025-10-18 09:39:31,106 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 06:31:46] 2025-10-18 09:39:31,107 | INFO     | ***************************************
[2025-10-18 06:31:46] 2025-10-18 09:39:31,107 | INFO     | 
[2025-10-18 06:31:46] 2025-10-18 09:39:31,109 | INFO     | architecture information:
[2025-10-18 06:31:46] 2025-10-18 09:39:31,133 | INFO     | executing command: cat /etc/os-release
[2025-10-18 06:31:46] 2025-10-18 09:39:31,189 | INFO     | cat /etc/os-release:
[2025-10-18 06:31:46] NAME="CentOS Linux"
[2025-10-18 06:31:46] VERSION="7 (Core)"
[2025-10-18 06:31:46] ID="centos"
[2025-10-18 06:31:46] ID_LIKE="rhel fedora"
[2025-10-18 06:31:46] VERSION_ID="7"
[2025-10-18 06:31:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 06:31:46] ANSI_COLOR="0;31"
[2025-10-18 06:31:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 06:31:46] HOME_URL="https://www.centos.org/"
[2025-10-18 06:31:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 06:31:46] 
[2025-10-18 06:31:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 06:31:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 06:31:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 06:31:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 06:31:46] 
[2025-10-18 06:31:46] 2025-10-18 09:39:31,190 | INFO     | ***************************************
[2025-10-18 06:31:46] 2025-10-18 09:39:31,693 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-18 06:31:46] 2025-10-18 09:39:31,802 | INFO     | sufficient remaining disk space (75363254272 B)
[2025-10-18 06:31:46] 2025-10-18 09:39:31,803 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 06:31:46] 2025-10-18 09:39:31,803 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 06:31:46] 2025-10-18 09:39:31,803 | INFO     | update_server=False
[2025-10-18 06:31:46] 2025-10-18 09:39:31,803 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 06:31:46] 2025-10-18 09:39:31,804 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 06:31:46] 2025-10-18 09:39:31,811 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 06:31:46] 2025-10-18 09:39:31,812 | INFO     | aborting loop
[2025-10-18 06:31:46] 2025-10-18 09:39:31,845 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 06:31:46] 2025-10-18 09:39:32,033 | INFO     | all data control threads have been joined
[2025-10-18 06:31:46] 2025-10-18 09:39:32,483 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 06:31:46] 2025-10-18 09:39:32,567 | INFO     | all payload control threads have been joined
[2025-10-18 06:31:46] 2025-10-18 09:39:32,809 | INFO     | [job] retrieve thread has finished
[2025-10-18 06:31:46] 2025-10-18 09:39:32,826 | INFO     | [job] job monitor thread has finished
[2025-10-18 06:31:46] 2025-10-18 09:39:33,039 | INFO     | [data] control thread has finished
[2025-10-18 06:31:46] 2025-10-18 09:39:33,312 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 06:31:46] 2025-10-18 09:39:33,328 | INFO     | all job control threads have been joined
[2025-10-18 06:31:46] 2025-10-18 09:39:33,350 | INFO     | [payload] failed_post thread has finished
[2025-10-18 06:31:46] 2025-10-18 09:39:33,426 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 06:31:46] 2025-10-18 09:39:33,489 | INFO     | [job] queue monitor thread has finished
[2025-10-18 06:31:46] 2025-10-18 09:39:33,574 | INFO     | [payload] control thread has finished
[2025-10-18 06:31:46] 2025-10-18 09:39:33,812 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 06:31:46] 2025-10-18 09:39:33,834 | INFO     | [data] copytool_in thread has finished
[2025-10-18 06:31:46] 2025-10-18 09:39:33,852 | INFO     | [data] copytool_out thread has finished
[2025-10-18 06:31:46] 2025-10-18 09:39:33,876 | INFO     | [job] validate thread has finished
[2025-10-18 06:31:46] 2025-10-18 09:39:34,127 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 06:31:46] 2025-10-18 09:39:34,154 | INFO     | [payload] validate_post thread has finished
[2025-10-18 06:31:46] 2025-10-18 09:39:34,337 | INFO     | [job] control thread has finished
[2025-10-18 06:31:46] 2025-10-18 09:39:35,813 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 06:31:46] 2025-10-18 09:39:53,193 | INFO     | [monitor] cgroup control has ended
[2025-10-18 06:31:46] 2025-10-18 09:39:54,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139996178782016)>', '<ExcThread(monitor, started 139994727446272)>']
[2025-10-18 06:31:46] 2025-10-18 09:39:59,687 | INFO     | all workflow threads have been joined
[2025-10-18 06:31:46] 2025-10-18 09:39:59,687 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 06:31:46] 2025-10-18 09:39:59,688 | INFO     | traces error code: 0
[2025-10-18 06:31:46] 2025-10-18 09:39:59,688 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 06:31:46] 2025-10-18 09:40:00,406 | INFO     | PID=1716788 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 06:31:46] 2025-10-18 09:40:00,407 | INFO     | .. there are 34 such processes running
[2025-10-18 06:31:46] 2025-10-18 09:40:00,411 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 06:31:46] 2025-10-18 09:40:00,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 06:31:46] 2025-10-18 09:40:00,412 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 06:31:46] 2025-10-18 09:40:00,412 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 06:31:46] 2025-10-18 09:40:00,412 | INFO     | [monitor] control thread has ended
[2025-10-18 06:31:46] 2025-10-18 09:40:01,243 [wrapper] ==== pilot stdout END ====
[2025-10-18 06:31:46] 2025-10-18 09:40:01,249 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 06:31:46] 2025-10-18 09:40:01,252 [wrapper] pilotpid: 1716788
[2025-10-18 06:31:46] 2025-10-18 09:40:01,256 [wrapper] Pilot exit status: 0
[2025-10-18 06:31:46] 2025-10-18 09:40:01,276 [wrapper] pandaids: 6849452406
[2025-10-18 06:31:46] 2025-10-18 09:40:01,349 [wrapper] cleanup supervisor_pilot 2731003 1716789
[2025-10-18 06:31:46] 2025-10-18 09:40:01,352 [wrapper] Test setup, not cleaning
[2025-10-18 06:31:46] 2025-10-18 09:40:01,356 [wrapper] apfmon messages muted
[2025-10-18 06:31:46] 2025-10-18 09:40:01,359 [wrapper] ==== wrapper stdout END ====
[2025-10-18 06:31:46] 2025-10-18 09:40:01,362 [wrapper] ==== wrapper stderr END ====
[2025-10-18 06:31:46]  *** Error codes and diagnostics ***
[2025-10-18 06:31:46]     "exeErrorCode": 0,
[2025-10-18 06:31:46]     "exeErrorDiag": "",
[2025-10-18 06:31:46]     "pilotErrorCode": 0,
[2025-10-18 06:31:46]     "pilotErrorDiag": "",
[2025-10-18 06:31:46]  *** Listing of results directory ***
[2025-10-18 06:31:46] total 340976
[2025-10-18 06:31:46] -rw-r--r--. 1 boincer umatlas    557409 Oct 17 18:46 pilot3.tar.gz
[2025-10-18 06:31:46] -rwx------. 1 boincer umatlas     36292 Oct 17 18:49 runpilot2-wrapper.sh
[2025-10-18 06:31:46] -rw-r--r--. 1 boincer umatlas      5112 Oct 17 18:49 queuedata.json
[2025-10-18 06:31:46] -rw-r--r--. 1 boincer umatlas       100 Oct 18 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 06:31:46] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 18 00:03 run_atlas
[2025-10-18 06:31:46] -rw-r--r--. 1 boincer umatlas       105 Oct 18 00:03 job.xml
[2025-10-18 06:31:46] -rw-r--r--. 2 boincer umatlas 191315831 Oct 18 00:03 EVNT.46808900._000002.pool.root.1
[2025-10-18 06:31:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 18 00:03 start_atlas.sh
[2025-10-18 06:31:46] drwxrwx--x. 2 boincer umatlas      4096 Oct 18 00:03 shared
[2025-10-18 06:31:46] -rw-r--r--. 2 boincer umatlas    569662 Oct 18 00:03 input.tar.gz
[2025-10-18 06:31:46] -rw-r--r--. 1 boincer umatlas         0 Oct 18 00:03 boinc_lockfile
[2025-10-18 06:31:46] -rw-r--r--. 1 boincer umatlas      2497 Oct 18 00:03 pandaJob.out
[2025-10-18 06:31:46] -rw-------. 1 boincer umatlas    976741 Oct 18 00:05 agis_schedconf.cvmfs.json
[2025-10-18 06:31:46] drwx------. 5 boincer umatlas      4096 Oct 18 00:06 pilot3
[2025-10-18 06:31:46] -rw-------. 1 boincer umatlas 148699810 Oct 18 05:38 HITS.46808902._000079.pool.root.1
[2025-10-18 06:31:46] -rw-r--r--. 1 boincer umatlas       529 Oct 18 05:38 boinc_task_state.xml
[2025-10-18 06:31:46] -rw-------. 1 boincer umatlas      1039 Oct 18 05:39 memory_monitor_summary.json
[2025-10-18 06:31:46] -rw-------. 1 boincer umatlas   1560740 Oct 18 05:39 agis_ddmendpoints.agis.ALL.json
[2025-10-18 06:31:46] -rw-------. 1 boincer umatlas    504315 Oct 18 05:39 log.46808902._000079.job.log.tgz.1
[2025-10-18 06:31:46] -rw-------. 1 boincer umatlas      7807 Oct 18 05:39 heartbeat.json
[2025-10-18 06:31:46] -rw-------. 1 boincer umatlas        95 Oct 18 05:40 pilot_heartbeat.json
[2025-10-18 06:31:46] -rw-------. 1 boincer umatlas       823 Oct 18 05:40 pilotlog.txt
[2025-10-18 06:31:46] -rw-------. 1 boincer umatlas   2118518 Oct 18 05:40 log.46808902._000079.job.log.1
[2025-10-18 06:31:46] -rw-------. 1 boincer umatlas       357 Oct 18 05:40 output.list
[2025-10-18 06:31:46] -rw-r--r--. 1 boincer umatlas       620 Oct 18 05:40 runtime_log
[2025-10-18 06:31:46] -rw-------. 1 boincer umatlas   2641920 Oct 18 05:40 result.tar.gz
[2025-10-18 06:31:46] -rw-------. 1 boincer umatlas       653 Oct 18 05:40 s9KNDmoR8T8n9Rq4apOajLDm4fhM0noT9bVof3QYDmpzaMDm3DKXyn.diag
[2025-10-18 06:31:46] -rw-r--r--. 1 boincer umatlas      8689 Oct 18 05:40 runtime_log.err
[2025-10-18 06:31:46] -rw-r--r--. 1 boincer umatlas      6656 Oct 18 06:31 init_data.xml
[2025-10-18 06:31:46] -rw-r--r--. 1 boincer umatlas      8192 Oct 18 06:31 boinc_mmap_file
[2025-10-18 06:31:46] -rw-r--r--. 1 boincer umatlas        26 Oct 18 06:31 wrapper_checkpoint.txt
[2025-10-18 06:31:46] -rw-r--r--. 1 boincer umatlas     21045 Oct 18 06:31 stderr.txt
[2025-10-18 06:31:46] HITS file was successfully produced:
[2025-10-18 06:31:46] -rw-------. 1 boincer umatlas 148699810 Oct 18 05:38 shared/HITS.pool.root.1
[2025-10-18 06:31:46]  *** Contents of shared directory: ***
[2025-10-18 06:31:46] total 335208
[2025-10-18 06:31:46] -rw-r--r--. 2 boincer umatlas 191315831 Oct 18 00:03 ATLAS.root_0
[2025-10-18 06:31:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 18 00:03 start_atlas.sh
[2025-10-18 06:31:46] -rw-r--r--. 2 boincer umatlas    569662 Oct 18 00:03 input.tar.gz
[2025-10-18 06:31:46] -rw-------. 1 boincer umatlas 148699810 Oct 18 05:38 HITS.pool.root.1
[2025-10-18 06:31:46] -rw-------. 1 boincer umatlas   2641920 Oct 18 05:40 result.tar.gz
06:31:48 (1706766): run_atlas exited; CPU time 40164.394751
06:31:48 (1706766): called boinc_finish(0)

</stderr_txt>
]]>

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