Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:03 (2808140): wrapper (7.7.26015): starting
00:02:03 (2808140): wrapper: running run_atlas (--nthreads 9)
[2025-10-18 00:02:03] Arguments: --nthreads 9
[2025-10-18 00:02:03] Threads: 9
[2025-10-18 00:02:03] Checking for CVMFS
[2025-10-18 00:02:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 00:02:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 00:02:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 00:02:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 00:02:14] 2.13.2.0 738863 137396 356560 151838 1 651 32607794 32935937 16789 16776704 0 146652209 99.731 102049106 30622 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-18 00:02:14] CVMFS is ok
[2025-10-18 00:02:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 00:02:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 00:02:14] Further information can be found at the LHC@home message board.
[2025-10-18 00:02:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 00:02:14] Checking for apptainer binary...
[2025-10-18 00:02:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 00:02:14] Running /usr/bin/apptainer --version
[2025-10-18 00:02:14] apptainer version 1.4.3-1.el9
[2025-10-18 00:02:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 00:02:17] c-4-38.aglt2.org
[2025-10-18 00:02:17] apptainer works
[2025-10-18 00:02:17] Set ATHENA_PROC_NUMBER=9
[2025-10-18 00:02:17] Set ATHENA_CORE_NUMBER=9
[2025-10-18 00:02:17] Starting ATLAS job with PandaID=6848015704
[2025-10-18 00:02:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 13:08:50]  *** The last 200 lines of the pilot log: ***
[2025-10-18 13:08:50] 2025-10-18 17:08:16,045 | INFO     | chi2: 7.266678439311856
[2025-10-18 13:08:50] 2025-10-18 17:08:16,045 | INFO     | current chi2=7.266678439311856 (change=0.2574700491540348 %)
[2025-10-18 13:08:50] 2025-10-18 17:08:16,045 | INFO     | right removable region: 761
[2025-10-18 13:08:50] 2025-10-18 17:08:16,046 | INFO     | sum of square deviations: 137167549109.14948
[2025-10-18 13:08:50] 2025-10-18 17:08:16,061 | INFO     | sum of deviations: 606847806470.9058
[2025-10-18 13:08:50] 2025-10-18 17:08:16,062 | INFO     | mean x: 1760784014.3779528
[2025-10-18 13:08:50] 2025-10-18 17:08:16,062 | INFO     | mean y: 2268057.7086614175
[2025-10-18 13:08:50] 2025-10-18 17:08:16,062 | INFO     | -- intersect: -7787678790.025914
[2025-10-18 13:08:50] 2025-10-18 17:08:16,062 | INFO     | intersect: -7787678790.025914
[2025-10-18 13:08:50] 2025-10-18 17:08:16,063 | INFO     | chi2: 3.5703396677421853
[2025-10-18 13:08:50] 2025-10-18 17:08:16,063 | INFO     | current chi2=3.5703396677421853 (change=50.993467755786384 %)
[2025-10-18 13:08:50] 2025-10-18 17:08:16,064 | INFO     | sum of square deviations: 134484355428.53664
[2025-10-18 13:08:50] 2025-10-18 17:08:16,079 | INFO     | sum of deviations: 464836232360.14734
[2025-10-18 13:08:50] 2025-10-18 17:08:16,079 | INFO     | mean x: 1760784166.8824306
[2025-10-18 13:08:50] 2025-10-18 17:08:16,079 | INFO     | mean y: 2276125.5072655217
[2025-10-18 13:08:50] 2025-10-18 17:08:16,079 | INFO     | -- intersect: -6083757268.674101
[2025-10-18 13:08:50] 2025-10-18 17:08:16,080 | INFO     | intersect: -6083757268.674101
[2025-10-18 13:08:50] 2025-10-18 17:08:16,081 | INFO     | chi2: 2.1430911451325505
[2025-10-18 13:08:50] 2025-10-18 17:08:16,081 | INFO     | current chi2=2.1430911451325505 (change=39.97514677678271 %)
[2025-10-18 13:08:50] 2025-10-18 17:08:16,082 | INFO     | sum of square deviations: 131836325530.61699
[2025-10-18 13:08:50] 2025-10-18 17:08:16,097 | INFO     | sum of deviations: 369712366517.13257
[2025-10-18 13:08:50] 2025-10-18 17:08:16,097 | INFO     | mean x: 1760784319.3882978
[2025-10-18 13:08:50] 2025-10-18 17:08:16,097 | INFO     | mean y: 2281603.424202128
[2025-10-18 13:08:50] 2025-10-18 17:08:16,097 | INFO     | -- intersect: -4935536065.774451
[2025-10-18 13:08:50] 2025-10-18 17:08:16,097 | INFO     | intersect: -4935536065.774451
[2025-10-18 13:08:50] 2025-10-18 17:08:16,098 | INFO     | chi2: 1.5392430255286005
[2025-10-18 13:08:50] 2025-10-18 17:08:16,099 | INFO     | current chi2=1.5392430255286005 (change=28.176502010911996 %)
[2025-10-18 13:08:50] 2025-10-18 17:08:16,100 | INFO     | sum of square deviations: 129223456155.7778
[2025-10-18 13:08:50] 2025-10-18 17:08:16,114 | INFO     | sum of deviations: 291540797019.33386
[2025-10-18 13:08:50] 2025-10-18 17:08:16,114 | INFO     | mean x: 1760784471.8888888
[2025-10-18 13:08:50] 2025-10-18 17:08:16,115 | INFO     | mean y: 2286165.136546185
[2025-10-18 13:08:50] 2025-10-18 17:08:16,115 | INFO     | -- intersect: -3970216378.78958
[2025-10-18 13:08:50] 2025-10-18 17:08:16,115 | INFO     | intersect: -3970216378.78958
[2025-10-18 13:08:50] 2025-10-18 17:08:16,116 | INFO     | chi2: 1.1330721051340302
[2025-10-18 13:08:50] 2025-10-18 17:08:16,116 | INFO     | current chi2=1.1330721051340302 (change=26.38770575264323 %)
[2025-10-18 13:08:50] 2025-10-18 17:08:16,117 | INFO     | sum of square deviations: 126645287028.6577
[2025-10-18 13:08:50] 2025-10-18 17:08:16,132 | INFO     | sum of deviations: 238637315993.16724
[2025-10-18 13:08:50] 2025-10-18 17:08:16,132 | INFO     | mean x: 1760784624.3908355
[2025-10-18 13:08:50] 2025-10-18 17:08:16,133 | INFO     | mean y: 2289292.230458221
[2025-10-18 13:08:50] 2025-10-18 17:08:16,133 | INFO     | -- intersect: -3315551637.069851
[2025-10-18 13:08:50] 2025-10-18 17:08:16,133 | INFO     | intersect: -3315551637.069851
[2025-10-18 13:08:50] 2025-10-18 17:08:16,134 | INFO     | chi2: 0.9412503544527425
[2025-10-18 13:08:50] 2025-10-18 17:08:16,134 | INFO     | current chi2=0.9412503544527425 (change=16.92935072817782 %)
[2025-10-18 13:08:50] 2025-10-18 17:08:16,134 | INFO     | left removable region: 50
[2025-10-18 13:08:50] 2025-10-18 17:08:16,135 | INFO     | sum of square deviations: 111423109014.29813
[2025-10-18 13:08:50] 2025-10-18 17:08:16,148 | INFO     | sum of deviations: 55660361916.95775
[2025-10-18 13:08:50] 2025-10-18 17:08:16,148 | INFO     | mean x: 1760785203.8959212
[2025-10-18 13:08:50] 2025-10-18 17:08:16,149 | INFO     | mean y: 2300632.675105485
[2025-10-18 13:08:50] 2025-10-18 17:08:16,149 | INFO     | -- intersect: -877282988.4774404
[2025-10-18 13:08:50] 2025-10-18 17:08:16,149 | INFO     | intersect: -877282988.4774404
[2025-10-18 13:08:50] 2025-10-18 17:08:16,150 | INFO     | chi2: 0.4339015099831227
[2025-10-18 13:08:50] 2025-10-18 17:08:16,150 | INFO     | -- intersect: -877282988.4774404
[2025-10-18 13:08:50] 2025-10-18 17:08:16,150 | INFO     | current memory leak: 0.50 B/s (using 711 data points, chi2=0.43)
[2025-10-18 13:08:50] 2025-10-18 17:08:16,151 | INFO     | could have reported an average CPU frequency of 2601 MHz (29 samples)
[2025-10-18 13:08:50] 2025-10-18 17:08:16,152 | INFO     | ..............................
[2025-10-18 13:08:50] 2025-10-18 17:08:16,152 | INFO     | . Timing measurements:
[2025-10-18 13:08:50] 2025-10-18 17:08:16,152 | INFO     | . get job = 2 s
[2025-10-18 13:08:50] 2025-10-18 17:08:16,152 | INFO     | . initial setup = 8 s
[2025-10-18 13:08:50] 2025-10-18 17:08:16,152 | INFO     | . payload setup = 71 s
[2025-10-18 13:08:50] 2025-10-18 17:08:16,152 | INFO     | . stage-in = 0 s
[2025-10-18 13:08:50] 2025-10-18 17:08:16,152 | INFO     | . payload execution = 46834 s
[2025-10-18 13:08:50] 2025-10-18 17:08:16,152 | INFO     | . stage-out = 4 s
[2025-10-18 13:08:50] 2025-10-18 17:08:16,153 | INFO     | . log creation = 0 s
[2025-10-18 13:08:50] 2025-10-18 17:08:16,153 | INFO     | ..............................
[2025-10-18 13:08:50] 2025-10-18 17:08:16,444 | INFO     | time since job start (47063s) is within the limit (172800.0s)
[2025-10-18 13:08:50] 2025-10-18 17:08:16,528 | INFO     | 
[2025-10-18 13:08:50] 2025-10-18 17:08:16,528 | INFO     | job summary report
[2025-10-18 13:08:50] 2025-10-18 17:08:16,528 | INFO     | --------------------------------------------------
[2025-10-18 13:08:50] 2025-10-18 17:08:16,528 | INFO     | PanDA job id: 6848015704
[2025-10-18 13:08:50] 2025-10-18 17:08:16,528 | INFO     | task id: 46771637
[2025-10-18 13:08:50] 2025-10-18 17:08:16,528 | INFO     | errors: (none)
[2025-10-18 13:08:50] 2025-10-18 17:08:16,529 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 13:08:50] 2025-10-18 17:08:16,529 | INFO     | pilot state: finished 
[2025-10-18 13:08:50] 2025-10-18 17:08:16,529 | INFO     | transexitcode: 0
[2025-10-18 13:08:50] 2025-10-18 17:08:16,529 | INFO     | exeerrorcode: 0
[2025-10-18 13:08:50] 2025-10-18 17:08:16,529 | INFO     | exeerrordiag: 
[2025-10-18 13:08:50] 2025-10-18 17:08:16,529 | INFO     | exitcode: 0
[2025-10-18 13:08:50] 2025-10-18 17:08:16,529 | INFO     | exitmsg: OK
[2025-10-18 13:08:50] 2025-10-18 17:08:16,529 | INFO     | cpuconsumptiontime: 55692 s
[2025-10-18 13:08:50] 2025-10-18 17:08:16,529 | INFO     | nevents: 400
[2025-10-18 13:08:50] 2025-10-18 17:08:16,529 | INFO     | neventsw: 0
[2025-10-18 13:08:50] 2025-10-18 17:08:16,530 | INFO     | pid: 2860943
[2025-10-18 13:08:50] 2025-10-18 17:08:16,530 | INFO     | pgrp: 2860943
[2025-10-18 13:08:50] 2025-10-18 17:08:16,530 | INFO     | corecount: 9
[2025-10-18 13:08:50] 2025-10-18 17:08:16,530 | INFO     | event service: False
[2025-10-18 13:08:50] 2025-10-18 17:08:16,530 | INFO     | sizes: {0: 2348101, 1: 2348702, 3: 2348786, 6: 2348842, 8: 2349013, 9: 2349041, 11: 2349197, 25: 2349225, 36: 2349253, 48: 2349281, 61: 2349309, 72: 2349617, 73: 2
[2025-10-18 13:08:50] 2025-10-18 17:08:16,530 | INFO     | --------------------------------------------------
[2025-10-18 13:08:50] 2025-10-18 17:08:16,530 | INFO     | 
[2025-10-18 13:08:50] 2025-10-18 17:08:16,530 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-18 13:08:50] 2025-10-18 17:08:16,566 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,567 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,567 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,567 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,567 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,567 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,567 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,568 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,568 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,568 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,568 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,568 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,568 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,568 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,568 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,569 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,569 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,569 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 13:08:50] 2025-10-18 17:08:16,569 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,569 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 13:08:50] 2025-10-18 17:08:16,569 | INFO     | job 6848015704 has completed (purged errors)
[2025-10-18 13:08:50] 2025-10-18 17:08:16,570 | INFO     | overall cleanup function is called
[2025-10-18 13:08:50] 2025-10-18 17:08:17,579 | INFO     | --- collectZombieJob: --- 10, [2860943]
[2025-10-18 13:08:50] 2025-10-18 17:08:17,579 | INFO     | zombie collector waiting for pid 2860943
[2025-10-18 13:08:50] 2025-10-18 17:08:17,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 13:08:50] 2025-10-18 17:08:17,579 | INFO     | collected zombie processes
[2025-10-18 13:08:50] 2025-10-18 17:08:17,579 | INFO     | will attempt to kill all subprocesses of pid=2860943
[2025-10-18 13:08:50] 2025-10-18 17:08:17,973 | INFO     | process IDs to be killed: [2860943] (in reverse order)
[2025-10-18 13:08:50] 2025-10-18 17:08:18,089 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 13:08:50] 2025-10-18 17:08:18,089 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 13:08:50] 2025-10-18 17:08:18,104 | INFO     | did not find any defunct processes belonging to 2860943
[2025-10-18 13:08:50] 2025-10-18 17:08:18,117 | INFO     | did not find any defunct processes belonging to 2860943
[2025-10-18 13:08:50] 2025-10-18 17:08:18,118 | INFO     | ready for new job
[2025-10-18 13:08:50] 2025-10-18 17:08:18,118 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 13:08:50] 2025-10-18 17:08:18,122 | INFO     | ***************************************
[2025-10-18 13:08:50] 2025-10-18 17:08:18,122 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 13:08:50] 2025-10-18 17:08:18,122 | INFO     | ***************************************
[2025-10-18 13:08:50] 2025-10-18 17:08:18,122 | INFO     | 
[2025-10-18 13:08:50] 2025-10-18 17:08:18,137 | INFO     | architecture information:
[2025-10-18 13:08:50] 2025-10-18 17:08:18,137 | INFO     | executing command: cat /etc/os-release
[2025-10-18 13:08:50] 2025-10-18 17:08:18,153 | INFO     | cat /etc/os-release:
[2025-10-18 13:08:50] NAME="CentOS Linux"
[2025-10-18 13:08:50] VERSION="7 (Core)"
[2025-10-18 13:08:50] ID="centos"
[2025-10-18 13:08:50] ID_LIKE="rhel fedora"
[2025-10-18 13:08:50] VERSION_ID="7"
[2025-10-18 13:08:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 13:08:50] ANSI_COLOR="0;31"
[2025-10-18 13:08:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 13:08:50] HOME_URL="https://www.centos.org/"
[2025-10-18 13:08:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 13:08:50] 
[2025-10-18 13:08:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 13:08:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 13:08:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 13:08:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 13:08:50] 
[2025-10-18 13:08:50] 2025-10-18 17:08:18,154 | INFO     | ***************************************
[2025-10-18 13:08:50] 2025-10-18 17:08:18,658 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-18 13:08:50] 2025-10-18 17:08:18,676 | INFO     | sufficient remaining disk space (75598135296 B)
[2025-10-18 13:08:50] 2025-10-18 17:08:18,676 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 13:08:50] 2025-10-18 17:08:18,676 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 13:08:50] 2025-10-18 17:08:18,676 | INFO     | update_server=False
[2025-10-18 13:08:50] 2025-10-18 17:08:18,677 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 13:08:50] 2025-10-18 17:08:18,677 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 13:08:50] 2025-10-18 17:08:18,745 | INFO     | all payload control threads have been joined
[2025-10-18 13:08:50] 2025-10-18 17:08:19,208 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 13:08:50] 2025-10-18 17:08:19,209 | INFO     | aborting loop
[2025-10-18 13:08:50] 2025-10-18 17:08:19,382 | INFO     | all job control threads have been joined
[2025-10-18 13:08:50] 2025-10-18 17:08:19,641 | INFO     | all data control threads have been joined
[2025-10-18 13:08:50] 2025-10-18 17:08:19,682 | INFO     | [job] retrieve thread has finished
[2025-10-18 13:08:50] 2025-10-18 17:08:19,751 | INFO     | [payload] control thread has finished
[2025-10-18 13:08:50] 2025-10-18 17:08:20,066 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 13:08:50] 2025-10-18 17:08:20,101 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 13:08:50] 2025-10-18 17:08:20,128 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 13:08:50] 2025-10-18 17:08:20,157 | INFO     | [payload] failed_post thread has finished
[2025-10-18 13:08:50] 2025-10-18 17:08:20,215 | INFO     | [job] job monitor thread has finished
[2025-10-18 13:08:50] 2025-10-18 17:08:20,387 | INFO     | [job] control thread has finished
[2025-10-18 13:08:50] 2025-10-18 17:08:20,524 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 13:08:50] 2025-10-18 17:08:20,570 | INFO     | [job] validate thread has finished
[2025-10-18 13:08:50] 2025-10-18 17:08:20,648 | INFO     | [data] control thread has finished
[2025-10-18 13:08:50] 2025-10-18 17:08:20,683 | INFO     | [data] copytool_out thread has finished
[2025-10-18 13:08:50] 2025-10-18 17:08:20,973 | INFO     | [payload] validate_post thread has finished
[2025-10-18 13:08:50] 2025-10-18 17:08:20,983 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 13:08:50] 2025-10-18 17:08:21,063 | INFO     | [data] copytool_in thread has finished
[2025-10-18 13:08:50] 2025-10-18 17:08:21,287 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 13:08:50] 2025-10-18 17:08:22,292 | INFO     | [job] queue monitor thread has finished
[2025-10-18 13:08:50] 2025-10-18 17:08:24,532 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 13:08:50] 2025-10-18 17:08:25,768 | INFO     | [monitor] cgroup control has ended
[2025-10-18 13:08:50] 2025-10-18 17:08:26,773 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140534336440128)>', '<ExcThread(monitor, started 140533469013760)>']
[2025-10-18 13:08:50] 2025-10-18 17:08:31,798 | INFO     | all workflow threads have been joined
[2025-10-18 13:08:50] 2025-10-18 17:08:31,798 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 13:08:50] 2025-10-18 17:08:31,798 | INFO     | traces error code: 0
[2025-10-18 13:08:50] 2025-10-18 17:08:31,799 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 13:08:50] 2025-10-18 17:08:50,042 | INFO     | PID=2828953 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 13:08:50] 2025-10-18 17:08:50,043 | INFO     | .. there are 35 such processes running
[2025-10-18 13:08:50] 2025-10-18 17:08:50,043 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 13:08:50] 2025-10-18 17:08:50,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 13:08:50] 2025-10-18 17:08:50,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 13:08:50] 2025-10-18 17:08:50,044 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 13:08:50] 2025-10-18 17:08:50,044 | INFO     | [monitor] control thread has ended
[2025-10-18 13:08:50] 2025-10-18 17:08:50,270 [wrapper] ==== pilot stdout END ====
[2025-10-18 13:08:50] 2025-10-18 17:08:50,274 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 13:08:50] 2025-10-18 17:08:50,277 [wrapper] pilotpid: 2828953
[2025-10-18 13:08:50] 2025-10-18 17:08:50,280 [wrapper] Pilot exit status: 0
[2025-10-18 13:08:50] 2025-10-18 17:08:50,295 [wrapper] pandaids: 6848015704
[2025-10-18 13:08:50] 2025-10-18 17:08:50,372 [wrapper] cleanup supervisor_pilot 1047015 2828954
[2025-10-18 13:08:50] 2025-10-18 17:08:50,376 [wrapper] Test setup, not cleaning
[2025-10-18 13:08:50] 2025-10-18 17:08:50,379 [wrapper] apfmon messages muted
[2025-10-18 13:08:50] 2025-10-18 17:08:50,383 [wrapper] ==== wrapper stdout END ====
[2025-10-18 13:08:50] 2025-10-18 17:08:50,387 [wrapper] ==== wrapper stderr END ====
[2025-10-18 13:08:50]  *** Error codes and diagnostics ***
[2025-10-18 13:08:50]     "exeErrorCode": 0,
[2025-10-18 13:08:50]     "exeErrorDiag": "",
[2025-10-18 13:08:50]     "pilotErrorCode": 0,
[2025-10-18 13:08:50]     "pilotErrorDiag": "",
[2025-10-18 13:08:50]  *** Listing of results directory ***
[2025-10-18 13:08:50] total 442204
[2025-10-18 13:08:50] -rw-r--r--. 1 boincer umatlas    557409 Oct 17 19:20 pilot3.tar.gz
[2025-10-18 13:08:50] -rw-r--r--. 1 boincer umatlas      5112 Oct 17 19:24 queuedata.json
[2025-10-18 13:08:50] -rwx------. 1 boincer umatlas     36292 Oct 17 19:25 runpilot2-wrapper.sh
[2025-10-18 13:08:50] -rw-r--r--. 1 boincer umatlas       100 Oct 18 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 13:08:50] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 18 00:02 run_atlas
[2025-10-18 13:08:50] -rw-r--r--. 1 boincer umatlas       105 Oct 18 00:02 job.xml
[2025-10-18 13:08:50] -rw-r--r--. 2 boincer umatlas 228314841 Oct 18 00:02 EVNT.46771634._001498.pool.root.1
[2025-10-18 13:08:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 18 00:02 start_atlas.sh
[2025-10-18 13:08:50] drwxrwx--x. 2 boincer umatlas      4096 Oct 18 00:02 shared
[2025-10-18 13:08:50] -rw-r--r--. 2 boincer umatlas    569680 Oct 18 00:02 input.tar.gz
[2025-10-18 13:08:50] -rw-r--r--. 1 boincer umatlas         0 Oct 18 00:02 boinc_lockfile
[2025-10-18 13:08:50] -rw-r--r--. 1 boincer umatlas      2558 Oct 18 00:02 pandaJob.out
[2025-10-18 13:08:50] -rw-------. 1 boincer umatlas    976741 Oct 18 00:03 agis_schedconf.cvmfs.json
[2025-10-18 13:08:50] drwx------. 5 boincer umatlas      4096 Oct 18 00:03 pilot3
[2025-10-18 13:08:50] -rw-r--r--. 1 boincer umatlas      6659 Oct 18 13:01 init_data.xml
[2025-10-18 13:08:50] -rw-------. 1 boincer umatlas 208420742 Oct 18 13:07 HITS.46771637._033843.pool.root.1
[2025-10-18 13:08:50] -rw-r--r--. 1 boincer umatlas       531 Oct 18 13:07 boinc_task_state.xml
[2025-10-18 13:08:50] -rw-------. 1 boincer umatlas      1042 Oct 18 13:08 memory_monitor_summary.json
[2025-10-18 13:08:50] -rw-------. 1 boincer umatlas        95 Oct 18 13:08 pilot_heartbeat.json
[2025-10-18 13:08:50] -rw-------. 1 boincer umatlas   1560740 Oct 18 13:08 agis_ddmendpoints.agis.ALL.json
[2025-10-18 13:08:50] -rw-------. 1 boincer umatlas    847689 Oct 18 13:08 log.46771637._033843.job.log.tgz.1
[2025-10-18 13:08:50] -rw-------. 1 boincer umatlas      7826 Oct 18 13:08 heartbeat.json
[2025-10-18 13:08:50] -rw-r--r--. 1 boincer umatlas      8192 Oct 18 13:08 boinc_mmap_file
[2025-10-18 13:08:50] -rw-r--r--. 1 boincer umatlas        28 Oct 18 13:08 wrapper_checkpoint.txt
[2025-10-18 13:08:50] -rw-------. 1 boincer umatlas       823 Oct 18 13:08 pilotlog.txt
[2025-10-18 13:08:50] -rw-------. 1 boincer umatlas   5241673 Oct 18 13:08 log.46771637._033843.job.log.1
[2025-10-18 13:08:50] -rw-------. 1 boincer umatlas       357 Oct 18 13:08 output.list
[2025-10-18 13:08:50] -rw-r--r--. 1 boincer umatlas       620 Oct 18 13:08 runtime_log
[2025-10-18 13:08:50] -rw-------. 1 boincer umatlas   6113280 Oct 18 13:08 result.tar.gz
[2025-10-18 13:08:50] -rw-r--r--. 1 boincer umatlas      8694 Oct 18 13:08 runtime_log.err
[2025-10-18 13:08:50] -rw-------. 1 boincer umatlas       656 Oct 18 13:08 pbPLDm9z8T8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSJvNDmmL9Tgn.diag
[2025-10-18 13:08:50] -rw-r--r--. 1 boincer umatlas     21089 Oct 18 13:08 stderr.txt
[2025-10-18 13:08:50] HITS file was successfully produced:
[2025-10-18 13:08:50] -rw-------. 1 boincer umatlas 208420742 Oct 18 13:07 shared/HITS.pool.root.1
[2025-10-18 13:08:50]  *** Contents of shared directory: ***
[2025-10-18 13:08:50] total 433056
[2025-10-18 13:08:50] -rw-r--r--. 2 boincer umatlas 228314841 Oct 18 00:02 ATLAS.root_0
[2025-10-18 13:08:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 18 00:02 start_atlas.sh
[2025-10-18 13:08:50] -rw-r--r--. 2 boincer umatlas    569680 Oct 18 00:02 input.tar.gz
[2025-10-18 13:08:50] -rw-------. 1 boincer umatlas 208420742 Oct 18 13:07 HITS.pool.root.1
[2025-10-18 13:08:50] -rw-------. 1 boincer umatlas   6113280 Oct 18 13:08 result.tar.gz
13:08:52 (2808140): run_atlas exited; CPU time 57427.201014
13:08:52 (2808140): called boinc_finish(0)

</stderr_txt>
]]>

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