Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:20:10 (1966545): wrapper (7.7.26015): starting
17:20:10 (1966545): wrapper: running run_atlas (--nthreads 4)
[2025-10-18 17:20:10] Arguments: --nthreads 4
[2025-10-18 17:20:10] Threads: 4
[2025-10-18 17:20:10] Checking for CVMFS
[2025-10-18 17:20:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 17:20:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 17:20:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 17:20:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 17:20:11] 2.9.2.0 279843 3528 91612 151857 0 57 35352069 36864000 0 130560 0 2952089 99.987 158728 2075 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-18 17:20:11] CVMFS is ok
[2025-10-18 17:20:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 17:20:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 17:20:11] Further information can be found at the LHC@home message board.
[2025-10-18 17:20:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 17:20:11] Checking for apptainer binary...
[2025-10-18 17:20:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 17:20:11] Running /usr/bin/apptainer --version
[2025-10-18 17:20:11] apptainer version 1.4.1-1.1
[2025-10-18 17:20:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 17:20:11] atlasA237
[2025-10-18 17:20:11] apptainer works
[2025-10-18 17:20:11] Set ATHENA_PROC_NUMBER=4
[2025-10-18 17:20:11] Set ATHENA_CORE_NUMBER=4
[2025-10-18 17:20:11] Starting ATLAS job with PandaID=6837359379
[2025-10-18 17:20:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 18:29:30]  *** The last 200 lines of the pilot log: ***
[2025-10-18 18:29:30] 2025-10-18 16:28:43,636 | INFO     | [job] queue monitor thread has finished
[2025-10-18 18:29:30] 2025-10-18 16:28:43,672 | INFO     | all data control threads have been joined
[2025-10-18 18:29:30] 2025-10-18 16:28:43,777 | INFO     | all payload control threads have been joined
[2025-10-18 18:29:30] 2025-10-18 16:28:43,857 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 18:29:30] 2025-10-18 16:28:44,064 | INFO     | [payload] failed_post thread has finished
[2025-10-18 18:29:30] 2025-10-18 16:28:44,087 | INFO     | [job] validate thread has finished
[2025-10-18 18:29:30] 2025-10-18 16:28:44,263 | INFO     | all job control threads have been joined
[2025-10-18 18:29:30] 2025-10-18 16:28:44,287 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 18:29:30] 2025-10-18 16:28:44,306 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 18:29:30] 2025-10-18 16:28:44,451 | INFO     | [data] copytool_in thread has finished
[2025-10-18 18:29:30] 2025-10-18 16:28:44,496 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 18:29:30] 2025-10-18 16:28:44,580 | INFO     | [job] job monitor thread has finished
[2025-10-18 18:29:30] 2025-10-18 16:28:44,636 | INFO     | [data] copytool_out thread has finished
[2025-10-18 18:29:30] 2025-10-18 16:28:44,677 | INFO     | [data] control thread has finished
[2025-10-18 18:29:30] 2025-10-18 16:28:44,783 | INFO     | [payload] control thread has finished
[2025-10-18 18:29:30] 2025-10-18 16:28:45,036 | INFO     | [payload] validate_post thread has finished
[2025-10-18 18:29:30] 2025-10-18 16:28:45,268 | INFO     | [job] control thread has finished
[2025-10-18 18:29:30] 2025-10-18 16:28:47,861 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 18:29:30] 2025-10-18 16:28:52,752 | INFO     | job.realtimelogging is not enabled
[2025-10-18 18:29:30] 2025-10-18 16:28:53,758 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 18:29:30] 2025-10-18 16:29:12,569 | INFO     | PID=1970354 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 18:29:30] 2025-10-18 16:29:12,570 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 18:29:30] 2025-10-18 16:29:12,570 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 18:29:30] 2025-10-18 16:29:12,571 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 18:29:30] 2025-10-18 16:29:23,694 | INFO     | [monitor] cgroup control has ended
[2025-10-18 18:29:30] 2025-10-18 16:29:25,035 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139900588406592)>', '<ExcThread(monitor, started 139899936159488)>']
[2025-10-18 18:29:30] 2025-10-18 16:29:25,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 18:29:30] 2025-10-18 16:29:25,637 | INFO     | [monitor] control thread has ended
[2025-10-18 18:29:30] 2025-10-18 16:29:30,060 | INFO     | all workflow threads have been joined
[2025-10-18 18:29:30] 2025-10-18 16:29:30,061 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 18:29:30] 2025-10-18 16:29:30,061 | INFO     | traces error code: 0
[2025-10-18 18:29:30] 2025-10-18 16:29:30,061 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 18:29:30] 2025-10-18 16:29:30,130 [wrapper] ==== pilot stdout END ====
[2025-10-18 18:29:30] 2025-10-18 16:29:30,134 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 18:29:30] 2025-10-18 16:29:30,137 [wrapper] pilotpid: 1970354
[2025-10-18 18:29:30] 2025-10-18 16:29:30,141 [wrapper] Pilot exit status: 0
[2025-10-18 18:29:30] 2025-10-18 16:29:30,151 [wrapper] pandaids: 6837359379
[2025-10-18 18:29:30] 2025-10-18 16:29:30,178 [wrapper] cleanup supervisor_pilot 1993849 1970355
[2025-10-18 18:29:30] 2025-10-18 16:29:30,182 [wrapper] Test setup, not cleaning
[2025-10-18 18:29:30] 2025-10-18 16:29:30,186 [wrapper] apfmon messages muted
[2025-10-18 18:29:30] 2025-10-18 16:29:30,189 [wrapper] ==== wrapper stdout END ====
[2025-10-18 18:29:30] 2025-10-18 16:29:30,193 [wrapper] ==== wrapper stderr END ====
[2025-10-18 18:29:30]  *** Error codes and diagnostics ***
[2025-10-18 18:29:30]     "exeErrorCode": 0,
[2025-10-18 18:29:30]     "exeErrorDiag": "",
[2025-10-18 18:29:30]     "pilotErrorCode": 0,
[2025-10-18 18:29:30]     "pilotErrorDiag": "",
[2025-10-18 18:29:30]  *** Listing of results directory ***
[2025-10-18 18:29:30] total 406012
[2025-10-18 18:29:30] -rw-r--r-- 1 boinc boinc    557409 Oct  9 21:24 pilot3.tar.gz
[2025-10-18 18:29:30] -rwx------ 1 boinc boinc     36292 Oct  9 21:25 runpilot2-wrapper.sh
[2025-10-18 18:29:30] -rw-r--r-- 1 boinc boinc      5112 Oct  9 21:25 queuedata.json
[2025-10-18 18:29:30] -rw-r--r-- 1 boinc boinc       100 Oct 18 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 18:29:30] -rwxr-xr-x 1 boinc boinc      7986 Oct 18 17:20 run_atlas
[2025-10-18 18:29:30] -rw-r--r-- 1 boinc boinc       105 Oct 18 17:20 job.xml
[2025-10-18 18:29:30] -rw-r--r-- 2 boinc boinc 220997819 Oct 18 17:20 EVNT.46676267._001035.pool.root.1
[2025-10-18 18:29:30] -rw-r--r-- 2 boinc boinc    569677 Oct 18 17:20 input.tar.gz
[2025-10-18 18:29:30] -rw-r--r-- 2 boinc boinc     15120 Oct 18 17:20 start_atlas.sh
[2025-10-18 18:29:30] drwxrwx--x 2 boinc boinc      4096 Oct 18 17:20 shared
[2025-10-18 18:29:30] -rw-r--r-- 1 boinc boinc         0 Oct 18 17:20 boinc_setup_complete
[2025-10-18 18:29:30] -rw-r--r-- 1 boinc boinc      6370 Oct 18 17:20 init_data.xml
[2025-10-18 18:29:30] -rw-r--r-- 1 boinc boinc         0 Oct 18 17:20 boinc_lockfile
[2025-10-18 18:29:30] -rw-r--r-- 1 boinc boinc      2549 Oct 18 17:20 pandaJob.out
[2025-10-18 18:29:30] -rw------- 1 boinc boinc    976750 Oct 18 17:20 agis_schedconf.cvmfs.json
[2025-10-18 18:29:30] -rw------- 1 boinc boinc   1560740 Oct 18 17:20 agis_ddmendpoints.agis.ALL.json
[2025-10-18 18:29:30] drwx------ 5 boinc boinc      4096 Oct 18 17:20 pilot3
[2025-10-18 18:29:30] -rw------- 1 boinc boinc 189148299 Oct 18 18:28 HITS.46676269._025038.pool.root.1
[2025-10-18 18:29:30] -rw-r--r-- 1 boinc boinc       529 Oct 18 18:28 boinc_task_state.xml
[2025-10-18 18:29:30] -rw------- 1 boinc boinc      1036 Oct 18 18:28 memory_monitor_summary.json
[2025-10-18 18:29:30] -rw------- 1 boinc boinc    251665 Oct 18 18:28 log.46676269._025038.job.log.tgz.1
[2025-10-18 18:29:30] -rw------- 1 boinc boinc      7771 Oct 18 18:28 heartbeat.json
[2025-10-18 18:29:30] -rw------- 1 boinc boinc        95 Oct 18 18:29 pilot_heartbeat.json
[2025-10-18 18:29:30] -rw-r--r-- 1 boinc boinc        27 Oct 18 18:29 wrapper_checkpoint.txt
[2025-10-18 18:29:30] -rw-r--r-- 1 boinc boinc      8192 Oct 18 18:29 boinc_mmap_file
[2025-10-18 18:29:30] -rw------- 1 boinc boinc      4824 Oct 18 18:29 pilotlog.txt
[2025-10-18 18:29:30] -rw------- 1 boinc boinc    610035 Oct 18 18:29 log.46676269._025038.job.log.1
[2025-10-18 18:29:30] -rw------- 1 boinc boinc       357 Oct 18 18:29 output.list
[2025-10-18 18:29:30] -rw-r--r-- 1 boinc boinc       620 Oct 18 18:29 runtime_log
[2025-10-18 18:29:30] -rw------- 1 boinc boinc    880640 Oct 18 18:29 result.tar.gz
[2025-10-18 18:29:30] -rw-r--r-- 1 boinc boinc      8792 Oct 18 18:29 runtime_log.err
[2025-10-18 18:29:30] -rw------- 1 boinc boinc       661 Oct 18 18:29 l56KDmiRBR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm49aNDmomuz4m.diag
[2025-10-18 18:29:30] -rw-r--r-- 1 boinc boinc      6739 Oct 18 18:29 stderr.txt
[2025-10-18 18:29:30] HITS file was successfully produced:
[2025-10-18 18:29:30] -rw------- 1 boinc boinc 189148299 Oct 18 18:28 shared/HITS.pool.root.1
[2025-10-18 18:29:30]  *** Contents of shared directory: ***
[2025-10-18 18:29:30] total 401980
[2025-10-18 18:29:30] -rw-r--r-- 2 boinc boinc 220997819 Oct 18 17:20 ATLAS.root_0
[2025-10-18 18:29:30] -rw-r--r-- 2 boinc boinc    569677 Oct 18 17:20 input.tar.gz
[2025-10-18 18:29:30] -rw-r--r-- 2 boinc boinc     15120 Oct 18 17:20 start_atlas.sh
[2025-10-18 18:29:30] -rw------- 1 boinc boinc 189148299 Oct 18 18:28 HITS.pool.root.1
[2025-10-18 18:29:30] -rw------- 1 boinc boinc    880640 Oct 18 18:29 result.tar.gz
18:29:31 (1966545): run_atlas exited; CPU time 15270.990374
18:29:31 (1966545): called boinc_finish(0)

</stderr_txt>
]]>

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