Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:53:56 (31572): wrapper (7.7.26015): starting
22:53:56 (31572): wrapper: running run_atlas (--nthreads 12)
[2025-10-17 22:53:56] Arguments: --nthreads 12
[2025-10-17 22:53:56] Threads: 12
[2025-10-17 22:53:56] Checking for CVMFS
[2025-10-17 22:53:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-17 22:53:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-17 22:53:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-17 22:53:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-17 22:53:57] 2.11.2.0 2991 230901 98228 151836 0 59 18037671 20275200 1 130560 1 114419231 99.984 13739235 12662 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-17 22:53:57] CVMFS is ok
[2025-10-17 22:53:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-17 22:53:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-17 22:53:57] Further information can be found at the LHC@home message board.
[2025-10-17 22:53:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-17 22:53:57] Checking for apptainer binary...
[2025-10-17 22:53:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-17 22:53:57] Running /usr/bin/apptainer --version
[2025-10-17 22:53:57] apptainer version 1.3.2-1.el7
[2025-10-17 22:53:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-17 22:53:58] c-205-32.aglt2.org
[2025-10-17 22:53:58] apptainer works
[2025-10-17 22:53:58] Set ATHENA_PROC_NUMBER=12
[2025-10-17 22:53:58] Set ATHENA_CORE_NUMBER=12
[2025-10-17 22:53:58] Starting ATLAS job with PandaID=6848014906
[2025-10-17 22:53:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 00:13:26]  *** The last 200 lines of the pilot log: ***
[2025-10-18 00:13:26]  lfn=log.46771637._033160.job.log.tgz.1
[2025-10-18 00:13:26]  mtime=0
[2025-10-18 00:13:26]  protocol_id=None
[2025-10-18 00:13:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-18 00:13:26]  replicas=None
[2025-10-18 00:13:26]  scope=mc23_13p6TeV
[2025-10-18 00:13:26]  status=None
[2025-10-18 00:13:26]  status_code=0
[2025-10-18 00:13:26]  storage_token=
[2025-10-18 00:13:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6848014906/log.46771637._033160.job.log.tgz.1
[2025-10-18 00:13:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/39/log.46771637._033160.job.log.tgz.1
[2025-10-18 00:13:26]  workdir=None
[2025-10-18 00:13:26] ]
[2025-10-18 00:13:26] 2025-10-18 04:12:52,481 | INFO     | transferring file log.46771637._033160.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6848014906/log.46771637._033160.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-18 00:13:26] 2025-10-18 04:12:52,481 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6848014906/log.46771637._033160.job.log.tgz.1 /tmp/boinchome/slots/0/log.46771637._033160.job
[2025-10-18 00:13:26] 2025-10-18 04:12:52,504 | INFO     | adding to output.list: log.46771637._033160.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/39/log.46771637._033160.job.log.tg
[2025-10-18 00:13:26] 2025-10-18 04:12:52,505 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-18 00:13:26] 2025-10-18 04:12:52,505 | INFO     | summary of transferred files:
[2025-10-18 00:13:26] 2025-10-18 04:12:52,505 | INFO     |  -- lfn=log.46771637._033160.job.log.tgz.1, status_code=0, status=transferred
[2025-10-18 00:13:26] 2025-10-18 04:12:52,506 | INFO     | stage-out finished correctly
[2025-10-18 00:13:26] 2025-10-18 04:12:52,591 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-18 00:13:26] 2025-10-18 04:12:52,672 | INFO     | job 6848014906 has state=finished
[2025-10-18 00:13:26] 2025-10-18 04:12:52,672 | INFO     | preparing for final server update for job 6848014906 in state='finished'
[2025-10-18 00:13:26] 2025-10-18 04:12:52,673 | INFO     | this job has now completed (state=finished)
[2025-10-18 00:13:26] 2025-10-18 04:12:52,673 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-18 00:13:26] 2025-10-18 04:12:52,673 | INFO     | log transfer has been attempted: DONE
[2025-10-18 00:13:26] 2025-10-18 04:12:52,673 | INFO     | job 6848014906 has finished - writing final server update
[2025-10-18 00:13:26] 2025-10-18 04:12:52,674 | INFO     | total number of processed events: 400 (read)
[2025-10-18 00:13:26] 2025-10-18 04:12:52,674 | INFO     | executing command: lscpu
[2025-10-18 00:13:26] 2025-10-18 04:12:52,699 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-18 00:13:26] 2025-10-18 04:12:53,500 | INFO     | time since job start (4720s) is within the limit (172800.0s)
[2025-10-18 00:13:26] 2025-10-18 04:12:54,294 | INFO     | monitor loop #352: job 0:6848014906 is in state 'finished'
[2025-10-18 00:13:26] 2025-10-18 04:12:54,299 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 00:13:26] 2025-10-18 04:12:55,505 | INFO     | time since job start (4722s) is within the limit (172800.0s)
[2025-10-18 00:13:26] 2025-10-18 04:12:56,802 | INFO     | monitor loop #353: job 0:6848014906 is in state 'finished'
[2025-10-18 00:13:26] 2025-10-18 04:12:56,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-18 00:13:26] 2025-10-18 04:12:57,222 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-18 00:13:26] 2025-10-18 04:12:57,226 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1806.75
[2025-10-18 00:13:26] 2025-10-18 04:12:57,228 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6848014906/memory_monitor_summary.json (trf name=prmon)
[2025-10-18 00:13:26] 2025-10-18 04:12:57,229 | INFO     | extracted standard info from prmon json
[2025-10-18 00:13:26] 2025-10-18 04:12:57,229 | INFO     | extracted standard memory fields from prmon json
[2025-10-18 00:13:26] 2025-10-18 04:12:57,229 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-18 00:13:26] 2025-10-18 04:12:57,229 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-18 00:13:26] 2025-10-18 04:12:57,230 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-18 00:13:26] 2025-10-18 04:12:57,231 | INFO     | fitting pss+swap vs Time
[2025-10-18 00:13:26] 2025-10-18 04:12:57,231 | INFO     | sum of square deviations: 106336877.5
[2025-10-18 00:13:26] 2025-10-18 04:12:57,232 | INFO     | sum of deviations: -5940000171.999998
[2025-10-18 00:13:26] 2025-10-18 04:12:57,232 | INFO     | mean x: 1760758490.5
[2025-10-18 00:13:26] 2025-10-18 04:12:57,232 | INFO     | mean y: 2739191.1714285715
[2025-10-18 00:13:26] 2025-10-18 04:12:57,232 | INFO     | -- intersect: 98359075979.6055
[2025-10-18 00:13:26] 2025-10-18 04:12:57,232 | INFO     | intersect: 98359075979.6055
[2025-10-18 00:13:26] 2025-10-18 04:12:57,232 | INFO     | chi2: 0.0834746028531581
[2025-10-18 00:13:26] 2025-10-18 04:12:57,233 | INFO     | -- intersect: 98359075979.6055
[2025-10-18 00:13:26] 2025-10-18 04:12:57,233 | INFO     | current memory leak: -55.86 B/s (using 70 data points, chi2=0.08)
[2025-10-18 00:13:26] 2025-10-18 04:12:57,233 | INFO     | could have reported an average CPU frequency of 2073 MHz (6 samples)
[2025-10-18 00:13:26] 2025-10-18 04:12:57,233 | INFO     | ..............................
[2025-10-18 00:13:26] 2025-10-18 04:12:57,233 | INFO     | . Timing measurements:
[2025-10-18 00:13:26] 2025-10-18 04:12:57,233 | INFO     | . get job = 0 s
[2025-10-18 00:13:26] 2025-10-18 04:12:57,233 | INFO     | . initial setup = 2 s
[2025-10-18 00:13:26] 2025-10-18 04:12:57,234 | INFO     | . payload setup = 6 s
[2025-10-18 00:13:26] 2025-10-18 04:12:57,234 | INFO     | . stage-in = 0 s
[2025-10-18 00:13:26] 2025-10-18 04:12:57,234 | INFO     | . payload execution = 4691 s
[2025-10-18 00:13:26] 2025-10-18 04:12:57,234 | INFO     | . stage-out = 0 s
[2025-10-18 00:13:26] 2025-10-18 04:12:57,234 | INFO     | . log creation = 0 s
[2025-10-18 00:13:26] 2025-10-18 04:12:57,234 | INFO     | ..............................
[2025-10-18 00:13:26] 2025-10-18 04:12:57,511 | INFO     | time since job start (4724s) is within the limit (172800.0s)
[2025-10-18 00:13:26] 2025-10-18 04:12:57,640 | INFO     | 
[2025-10-18 00:13:26] 2025-10-18 04:12:57,640 | INFO     | job summary report
[2025-10-18 00:13:26] 2025-10-18 04:12:57,640 | INFO     | --------------------------------------------------
[2025-10-18 00:13:26] 2025-10-18 04:12:57,640 | INFO     | PanDA job id: 6848014906
[2025-10-18 00:13:26] 2025-10-18 04:12:57,640 | INFO     | task id: 46771637
[2025-10-18 00:13:26] 2025-10-18 04:12:57,640 | INFO     | errors: (none)
[2025-10-18 00:13:26] 2025-10-18 04:12:57,641 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-18 00:13:26] 2025-10-18 04:12:57,641 | INFO     | pilot state: finished 
[2025-10-18 00:13:26] 2025-10-18 04:12:57,641 | INFO     | transexitcode: 0
[2025-10-18 00:13:26] 2025-10-18 04:12:57,641 | INFO     | exeerrorcode: 0
[2025-10-18 00:13:26] 2025-10-18 04:12:57,641 | INFO     | exeerrordiag: 
[2025-10-18 00:13:26] 2025-10-18 04:12:57,641 | INFO     | exitcode: 0
[2025-10-18 00:13:26] 2025-10-18 04:12:57,641 | INFO     | exitmsg: OK
[2025-10-18 00:13:26] 2025-10-18 04:12:57,642 | INFO     | cpuconsumptiontime: 50215 s
[2025-10-18 00:13:26] 2025-10-18 04:12:57,642 | INFO     | nevents: 400
[2025-10-18 00:13:26] 2025-10-18 04:12:57,642 | INFO     | neventsw: 0
[2025-10-18 00:13:26] 2025-10-18 04:12:57,642 | INFO     | pid: 9375
[2025-10-18 00:13:26] 2025-10-18 04:12:57,642 | INFO     | pgrp: 9375
[2025-10-18 00:13:26] 2025-10-18 04:12:57,642 | INFO     | corecount: 12
[2025-10-18 00:13:26] 2025-10-18 04:12:57,643 | INFO     | event service: False
[2025-10-18 00:13:26] 2025-10-18 04:12:57,643 | INFO     | sizes: {0: 2348756, 1: 2348955, 5: 2349217, 11: 2349273, 4702: 2375432, 4704: 2384614, 4708: 2384752}
[2025-10-18 00:13:26] 2025-10-18 04:12:57,643 | INFO     | --------------------------------------------------
[2025-10-18 00:13:26] 2025-10-18 04:12:57,643 | INFO     | 
[2025-10-18 00:13:26] 2025-10-18 04:12:57,643 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-18 00:13:26] 2025-10-18 04:12:57,667 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,668 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,668 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,668 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,668 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,668 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,668 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,669 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,669 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,669 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,669 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,669 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,669 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,670 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,670 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,670 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,670 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,670 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-18 00:13:26] 2025-10-18 04:12:57,670 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,671 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-18 00:13:26] 2025-10-18 04:12:57,671 | INFO     | job 6848014906 has completed (purged errors)
[2025-10-18 00:13:26] 2025-10-18 04:12:57,671 | INFO     | overall cleanup function is called
[2025-10-18 00:13:26] 2025-10-18 04:12:58,679 | INFO     | --- collectZombieJob: --- 10, [9375]
[2025-10-18 00:13:26] 2025-10-18 04:12:58,679 | INFO     | zombie collector waiting for pid 9375
[2025-10-18 00:13:26] 2025-10-18 04:12:58,679 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-18 00:13:26] 2025-10-18 04:12:58,679 | INFO     | collected zombie processes
[2025-10-18 00:13:26] 2025-10-18 04:12:58,680 | INFO     | will attempt to kill all subprocesses of pid=9375
[2025-10-18 00:13:26] 2025-10-18 04:12:58,769 | INFO     | process IDs to be killed: [9375] (in reverse order)
[2025-10-18 00:13:26] 2025-10-18 04:12:58,821 | WARNING  | found no corresponding commands to process id(s)
[2025-10-18 00:13:26] 2025-10-18 04:12:58,821 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-18 00:13:26] 2025-10-18 04:12:58,825 | INFO     | did not find any defunct processes belonging to 9375
[2025-10-18 00:13:26] 2025-10-18 04:12:58,828 | INFO     | did not find any defunct processes belonging to 9375
[2025-10-18 00:13:26] 2025-10-18 04:12:58,828 | INFO     | ready for new job
[2025-10-18 00:13:26] 2025-10-18 04:12:58,828 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-18 00:13:26] 2025-10-18 04:12:58,830 | INFO     | ***************************************
[2025-10-18 00:13:26] 2025-10-18 04:12:58,830 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-18 00:13:26] 2025-10-18 04:12:58,830 | INFO     | ***************************************
[2025-10-18 00:13:26] 2025-10-18 04:12:58,830 | INFO     | 
[2025-10-18 00:13:26] 2025-10-18 04:12:58,831 | INFO     | architecture information:
[2025-10-18 00:13:26] 2025-10-18 04:12:58,831 | INFO     | executing command: cat /etc/os-release
[2025-10-18 00:13:26] 2025-10-18 04:12:58,845 | INFO     | cat /etc/os-release:
[2025-10-18 00:13:26] NAME="CentOS Linux"
[2025-10-18 00:13:26] VERSION="7 (Core)"
[2025-10-18 00:13:26] ID="centos"
[2025-10-18 00:13:26] ID_LIKE="rhel fedora"
[2025-10-18 00:13:26] VERSION_ID="7"
[2025-10-18 00:13:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-18 00:13:26] ANSI_COLOR="0;31"
[2025-10-18 00:13:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-18 00:13:26] HOME_URL="https://www.centos.org/"
[2025-10-18 00:13:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-18 00:13:26] 
[2025-10-18 00:13:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-18 00:13:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-18 00:13:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-18 00:13:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-18 00:13:26] 
[2025-10-18 00:13:26] 2025-10-18 04:12:58,845 | INFO     | ***************************************
[2025-10-18 00:13:26] 2025-10-18 04:12:59,348 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-18 00:13:26] 2025-10-18 04:12:59,363 | INFO     | sufficient remaining disk space (29339156480 B)
[2025-10-18 00:13:26] 2025-10-18 04:12:59,363 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-18 00:13:26] 2025-10-18 04:12:59,364 | INFO     | current server update state: UPDATING_FINAL
[2025-10-18 00:13:26] 2025-10-18 04:12:59,364 | INFO     | update_server=False
[2025-10-18 00:13:26] 2025-10-18 04:12:59,364 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-18 00:13:26] 2025-10-18 04:12:59,364 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 00:13:26] 2025-10-18 04:12:59,364 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-18 00:13:26] 2025-10-18 04:12:59,365 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 00:13:26] 2025-10-18 04:12:59,365 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 00:13:26] 2025-10-18 04:12:59,365 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 00:13:26] 2025-10-18 04:12:59,457 | INFO     | all data control threads have been joined
[2025-10-18 00:13:26] 2025-10-18 04:12:59,476 | INFO     | all payload control threads have been joined
[2025-10-18 00:13:26] 2025-10-18 04:12:59,758 | INFO     | all job control threads have been joined
[2025-10-18 00:13:26] 2025-10-18 04:13:00,310 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 00:13:26] 2025-10-18 04:13:00,311 | INFO     | aborting loop
[2025-10-18 00:13:26] 2025-10-18 04:13:00,368 | INFO     | [job] retrieve thread has finished
[2025-10-18 00:13:26] 2025-10-18 04:13:00,394 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 00:13:26] 2025-10-18 04:13:00,413 | INFO     | [payload] failed_post thread has finished
[2025-10-18 00:13:26] 2025-10-18 04:13:00,462 | INFO     | [data] control thread has finished
[2025-10-18 00:13:26] 2025-10-18 04:13:00,481 | INFO     | [payload] control thread has finished
[2025-10-18 00:13:26] 2025-10-18 04:13:00,511 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 00:13:26] 2025-10-18 04:13:00,603 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 00:13:26] 2025-10-18 04:13:00,646 | INFO     | [data] copytool_in thread has finished
[2025-10-18 00:13:26] 2025-10-18 04:13:00,763 | INFO     | [job] control thread has finished
[2025-10-18 00:13:26] 2025-10-18 04:13:01,085 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 00:13:26] 2025-10-18 04:13:01,243 | INFO     | [payload] validate_post thread has finished
[2025-10-18 00:13:26] 2025-10-18 04:13:01,316 | INFO     | [job] job monitor thread has finished
[2025-10-18 00:13:26] 2025-10-18 04:13:01,659 | INFO     | [job] validate thread has finished
[2025-10-18 00:13:26] 2025-10-18 04:13:01,814 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 00:13:26] 2025-10-18 04:13:02,323 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-18 00:13:26] 2025-10-18 04:13:02,608 | INFO     | [data] copytool_out thread has finished
[2025-10-18 00:13:26] 2025-10-18 04:13:03,328 | INFO     | [job] queue monitor thread has finished
[2025-10-18 00:13:26] 2025-10-18 04:13:03,370 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 00:13:26] 2025-10-18 04:13:20,088 | INFO     | [monitor] cgroup control has ended
[2025-10-18 00:13:26] 2025-10-18 04:13:21,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140544298350400)>', '<ExcThread(monitor, started 140543728277248)>']
[2025-10-18 00:13:26] 2025-10-18 04:13:21,471 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 00:13:26] 2025-10-18 04:13:21,471 | INFO     | [monitor] control thread has ended
[2025-10-18 00:13:26] 2025-10-18 04:13:26,432 | INFO     | all workflow threads have been joined
[2025-10-18 00:13:26] 2025-10-18 04:13:26,432 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 00:13:26] 2025-10-18 04:13:26,433 | INFO     | traces error code: 0
[2025-10-18 00:13:26] 2025-10-18 04:13:26,433 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 00:13:26] 2025-10-18 04:13:26,519 [wrapper] ==== pilot stdout END ====
[2025-10-18 00:13:26] 2025-10-18 04:13:26,523 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 00:13:26] 2025-10-18 04:13:26,526 [wrapper] pilotpid: 3018
[2025-10-18 00:13:26] 2025-10-18 04:13:26,530 [wrapper] Pilot exit status: 0
[2025-10-18 00:13:26] 2025-10-18 04:13:26,544 [wrapper] pandaids: 6848014906
[2025-10-18 00:13:26] 2025-10-18 04:13:26,584 [wrapper] cleanup supervisor_pilot   317 3019
[2025-10-18 00:13:26] 2025-10-18 04:13:26,588 [wrapper] Test setup, not cleaning
[2025-10-18 00:13:26] 2025-10-18 04:13:26,592 [wrapper] apfmon messages muted
[2025-10-18 00:13:26] 2025-10-18 04:13:26,595 [wrapper] ==== wrapper stdout END ====
[2025-10-18 00:13:26] 2025-10-18 04:13:26,599 [wrapper] ==== wrapper stderr END ====
[2025-10-18 00:13:26]  *** Error codes and diagnostics ***
[2025-10-18 00:13:26]     "exeErrorCode": 0,
[2025-10-18 00:13:26]     "exeErrorDiag": "",
[2025-10-18 00:13:26]     "pilotErrorCode": 0,
[2025-10-18 00:13:26]     "pilotErrorDiag": "",
[2025-10-18 00:13:26]  *** Listing of results directory ***
[2025-10-18 00:13:26] total 426932
[2025-10-18 00:13:26] -rw-r--r-- 1 boincer umatlas    557409 Oct 17 18:20 pilot3.tar.gz
[2025-10-18 00:13:26] -rw-r--r-- 1 boincer umatlas      5112 Oct 17 18:26 queuedata.json
[2025-10-18 00:13:26] -rwx------ 1 boincer umatlas     36292 Oct 17 18:27 runpilot2-wrapper.sh
[2025-10-18 00:13:26] -rw-r--r-- 1 boincer umatlas       100 Oct 17 22:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 00:13:26] -rwxr-xr-x 1 boincer umatlas      7986 Oct 17 22:53 run_atlas
[2025-10-18 00:13:26] -rw-r--r-- 1 boincer umatlas       105 Oct 17 22:53 job.xml
[2025-10-18 00:13:26] -rw-r--r-- 2 boincer umatlas 228506674 Oct 17 22:53 EVNT.46771634._001460.pool.root.1
[2025-10-18 00:13:26] -rw-r--r-- 2 boincer umatlas     15120 Oct 17 22:53 start_atlas.sh
[2025-10-18 00:13:26] drwxrwx--x 2 boincer umatlas      4096 Oct 17 22:53 shared
[2025-10-18 00:13:26] -rw-r--r-- 2 boincer umatlas    569672 Oct 17 22:53 input.tar.gz
[2025-10-18 00:13:26] -rw-r--r-- 1 boincer umatlas         0 Oct 17 22:53 boinc_lockfile
[2025-10-18 00:13:26] -rw-r--r-- 1 boincer umatlas      2557 Oct 17 22:53 pandaJob.out
[2025-10-18 00:13:26] -rw------- 1 boincer umatlas    976749 Oct 17 22:54 agis_schedconf.cvmfs.json
[2025-10-18 00:13:26] -rw------- 1 boincer umatlas   1560740 Oct 17 22:54 agis_ddmendpoints.agis.ALL.json
[2025-10-18 00:13:26] drwx------ 5 boincer umatlas      4096 Oct 17 22:54 pilot3
[2025-10-18 00:13:26] -rw-r--r-- 1 boincer umatlas      5953 Oct 18 00:09 init_data.xml
[2025-10-18 00:13:26] -rw------- 1 boincer umatlas        95 Oct 18 00:12 pilot_heartbeat.json
[2025-10-18 00:13:26] -rw------- 1 boincer umatlas 202656237 Oct 18 00:12 HITS.46771637._033160.pool.root.1
[2025-10-18 00:13:26] -rw-r--r-- 1 boincer umatlas       529 Oct 18 00:12 boinc_task_state.xml
[2025-10-18 00:13:26] -rw------- 1 boincer umatlas      1062 Oct 18 00:12 memory_monitor_summary.json
[2025-10-18 00:13:26] -rw------- 1 boincer umatlas    374285 Oct 18 00:12 log.46771637._033160.job.log.tgz.1
[2025-10-18 00:13:26] -rw------- 1 boincer umatlas      7858 Oct 18 00:12 heartbeat.json
[2025-10-18 00:13:26] -rw-r--r-- 1 boincer umatlas      8192 Oct 18 00:13 boinc_mmap_file
[2025-10-18 00:13:26] -rw-r--r-- 1 boincer umatlas        27 Oct 18 00:13 wrapper_checkpoint.txt
[2025-10-18 00:13:26] -rw------- 1 boincer umatlas      4552 Oct 18 00:13 pilotlog.txt
[2025-10-18 00:13:26] -rw------- 1 boincer umatlas    681776 Oct 18 00:13 log.46771637._033160.job.log.1
[2025-10-18 00:13:26] -rw------- 1 boincer umatlas       357 Oct 18 00:13 output.list
[2025-10-18 00:13:26] -rw-r--r-- 1 boincer umatlas       620 Oct 18 00:13 runtime_log
[2025-10-18 00:13:26] -rw------- 1 boincer umatlas   1075200 Oct 18 00:13 result.tar.gz
[2025-10-18 00:13:26] -rw-r--r-- 1 boincer umatlas      8705 Oct 18 00:13 runtime_log.err
[2025-10-18 00:13:26] -rw------- 1 boincer umatlas       659 Oct 18 00:13 QqmNDmz57T8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfBvNDmciTHQo.diag
[2025-10-18 00:13:26] -rw-r--r-- 1 boincer umatlas     21527 Oct 18 00:13 stderr.txt
[2025-10-18 00:13:26] HITS file was successfully produced:
[2025-10-18 00:13:26] -rw------- 1 boincer umatlas 202656237 Oct 18 00:12 shared/HITS.pool.root.1
[2025-10-18 00:13:26]  *** Contents of shared directory: ***
[2025-10-18 00:13:26] total 422692
[2025-10-18 00:13:26] -rw-r--r-- 2 boincer umatlas 228506674 Oct 17 22:53 ATLAS.root_0
[2025-10-18 00:13:26] -rw-r--r-- 2 boincer umatlas     15120 Oct 17 22:53 start_atlas.sh
[2025-10-18 00:13:26] -rw-r--r-- 2 boincer umatlas    569672 Oct 17 22:53 input.tar.gz
[2025-10-18 00:13:26] -rw------- 1 boincer umatlas 202656237 Oct 18 00:12 HITS.pool.root.1
[2025-10-18 00:13:26] -rw------- 1 boincer umatlas   1075200 Oct 18 00:13 result.tar.gz
00:13:28 (31572): run_atlas exited; CPU time 50199.593245
00:13:28 (31572): called boinc_finish(0)

</stderr_txt>
]]>

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