Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:01:47 (1932242): wrapper (7.7.26015): starting
16:01:47 (1932242): wrapper: running run_atlas (--nthreads 4)
[2025-10-18 16:01:47] Arguments: --nthreads 4
[2025-10-18 16:01:47] Threads: 4
[2025-10-18 16:01:47] Checking for CVMFS
[2025-10-18 16:01:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 16:01:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 16:01:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 16:01:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 16:01:47] 2.9.2.0 279843 3450 92556 151852 2 57 35334476 36864000 0 130560 0 2886492 99.987 152078 2041 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-18 16:01:47] CVMFS is ok
[2025-10-18 16:01:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 16:01:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 16:01:47] Further information can be found at the LHC@home message board.
[2025-10-18 16:01:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 16:01:47] Checking for apptainer binary...
[2025-10-18 16:01:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 16:01:47] Running /usr/bin/apptainer --version
[2025-10-18 16:01:47] apptainer version 1.4.1-1.1
[2025-10-18 16:01:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 16:01:47] atlasA237
[2025-10-18 16:01:47] apptainer works
[2025-10-18 16:01:47] Set ATHENA_PROC_NUMBER=4
[2025-10-18 16:01:47] Set ATHENA_CORE_NUMBER=4
[2025-10-18 16:01:47] Starting ATLAS job with PandaID=6847316378
[2025-10-18 16:01:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 17:20:06]  *** The last 200 lines of the pilot log: ***
[2025-10-18 17:20:06] 2025-10-18 15:19:20,025 | INFO     | all data control threads have been joined
[2025-10-18 17:20:06] 2025-10-18 15:19:20,050 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 17:20:06] 2025-10-18 15:19:20,050 | INFO     | aborting loop
[2025-10-18 17:20:06] 2025-10-18 15:19:20,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 17:20:06] 2025-10-18 15:19:20,553 | INFO     | all payload control threads have been joined
[2025-10-18 17:20:06] 2025-10-18 15:19:20,554 | INFO     | [job] retrieve thread has finished
[2025-10-18 17:20:06] 2025-10-18 15:19:20,555 | INFO     | [job] queue monitor thread has finished
[2025-10-18 17:20:06] 2025-10-18 15:19:20,594 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 17:20:06] 2025-10-18 15:19:20,972 | INFO     | [job] control thread has finished
[2025-10-18 17:20:06] 2025-10-18 15:19:21,031 | INFO     | [data] control thread has finished
[2025-10-18 17:20:06] 2025-10-18 15:19:21,056 | INFO     | [job] job monitor thread has finished
[2025-10-18 17:20:06] 2025-10-18 15:19:21,064 | INFO     | [payload] validate_post thread has finished
[2025-10-18 17:20:06] 2025-10-18 15:19:21,352 | INFO     | [job] validate thread has finished
[2025-10-18 17:20:06] 2025-10-18 15:19:21,383 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 17:20:06] 2025-10-18 15:19:21,440 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 17:20:06] 2025-10-18 15:19:21,478 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 17:20:06] 2025-10-18 15:19:21,555 | INFO     | [data] copytool_out thread has finished
[2025-10-18 17:20:06] 2025-10-18 15:19:21,559 | INFO     | [payload] control thread has finished
[2025-10-18 17:20:06] 2025-10-18 15:19:21,583 | INFO     | [data] copytool_in thread has finished
[2025-10-18 17:20:06] 2025-10-18 15:19:22,100 | INFO     | [payload] failed_post thread has finished
[2025-10-18 17:20:06] 2025-10-18 15:19:24,497 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 17:20:06] 2025-10-18 15:19:50,359 | INFO     | PID=1936038 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 17:20:06] 2025-10-18 15:19:50,360 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 17:20:06] 2025-10-18 15:19:50,360 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 17:20:06] 2025-10-18 15:19:50,360 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 17:20:06] 2025-10-18 15:20:00,380 | INFO     | [monitor] cgroup control has ended
[2025-10-18 17:20:06] 2025-10-18 15:20:01,038 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140244629477184)>', '<ExcThread(monitor, started 140243692939008)>']
[2025-10-18 17:20:06] 2025-10-18 15:20:01,415 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 17:20:06] 2025-10-18 15:20:01,416 | INFO     | [monitor] control thread has ended
[2025-10-18 17:20:06] 2025-10-18 15:20:06,056 | INFO     | all workflow threads have been joined
[2025-10-18 17:20:06] 2025-10-18 15:20:06,057 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 17:20:06] 2025-10-18 15:20:06,057 | INFO     | traces error code: 0
[2025-10-18 17:20:06] 2025-10-18 15:20:06,057 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 17:20:06] 2025-10-18 15:20:06,128 [wrapper] ==== pilot stdout END ====
[2025-10-18 17:20:06] 2025-10-18 15:20:06,132 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 17:20:06] 2025-10-18 15:20:06,135 [wrapper] pilotpid: 1936038
[2025-10-18 17:20:06] 2025-10-18 15:20:06,138 [wrapper] Pilot exit status: 0
[2025-10-18 17:20:06] 2025-10-18 15:20:06,148 [wrapper] pandaids: 6847316378
[2025-10-18 17:20:06] 2025-10-18 15:20:06,175 [wrapper] cleanup supervisor_pilot 1963737 1936039
[2025-10-18 17:20:06] 2025-10-18 15:20:06,179 [wrapper] Test setup, not cleaning
[2025-10-18 17:20:06] 2025-10-18 15:20:06,182 [wrapper] apfmon messages muted
[2025-10-18 17:20:06] 2025-10-18 15:20:06,185 [wrapper] ==== wrapper stdout END ====
[2025-10-18 17:20:06] 2025-10-18 15:20:06,188 [wrapper] ==== wrapper stderr END ====
[2025-10-18 17:20:06]  *** Error codes and diagnostics ***
[2025-10-18 17:20:06]     "exeErrorCode": 0,
[2025-10-18 17:20:06]     "exeErrorDiag": "",
[2025-10-18 17:20:06]     "pilotErrorCode": 0,
[2025-10-18 17:20:06]     "pilotErrorDiag": "",
[2025-10-18 17:20:06]  *** Listing of results directory ***
[2025-10-18 17:20:06] total 431120
[2025-10-18 17:20:06] -rw-r--r-- 1 boinc boinc    557409 Oct 16 16:41 pilot3.tar.gz
[2025-10-18 17:20:06] -rw-r--r-- 1 boinc boinc      5112 Oct 16 16:53 queuedata.json
[2025-10-18 17:20:06] -rwx------ 1 boinc boinc     36292 Oct 16 16:56 runpilot2-wrapper.sh
[2025-10-18 17:20:06] -rw-r--r-- 1 boinc boinc       100 Oct 18 16:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 17:20:06] -rwxr-xr-x 1 boinc boinc      7986 Oct 18 16:01 run_atlas
[2025-10-18 17:20:06] -rw-r--r-- 1 boinc boinc       105 Oct 18 16:01 job.xml
[2025-10-18 17:20:06] -rw-r--r-- 2 boinc boinc 229986138 Oct 18 16:01 EVNT.46771634._000669.pool.root.1
[2025-10-18 17:20:06] -rw-r--r-- 2 boinc boinc    569672 Oct 18 16:01 input.tar.gz
[2025-10-18 17:20:06] -rw-r--r-- 2 boinc boinc     15120 Oct 18 16:01 start_atlas.sh
[2025-10-18 17:20:06] drwxrwx--x 2 boinc boinc      4096 Oct 18 16:01 shared
[2025-10-18 17:20:06] -rw-r--r-- 1 boinc boinc         0 Oct 18 16:01 boinc_setup_complete
[2025-10-18 17:20:06] -rw-r--r-- 1 boinc boinc      6370 Oct 18 16:01 init_data.xml
[2025-10-18 17:20:06] -rw-r--r-- 1 boinc boinc         0 Oct 18 16:01 boinc_lockfile
[2025-10-18 17:20:06] -rw-r--r-- 1 boinc boinc      2556 Oct 18 16:01 pandaJob.out
[2025-10-18 17:20:06] -rw------- 1 boinc boinc    976742 Oct 18 16:01 agis_schedconf.cvmfs.json
[2025-10-18 17:20:06] -rw------- 1 boinc boinc   1560740 Oct 18 16:01 agis_ddmendpoints.agis.ALL.json
[2025-10-18 17:20:06] drwx------ 5 boinc boinc      4096 Oct 18 16:01 pilot3
[2025-10-18 17:20:06] -rw------- 1 boinc boinc 205691152 Oct 18 17:18 HITS.46771637._012299.pool.root.1
[2025-10-18 17:20:06] -rw-r--r-- 1 boinc boinc       529 Oct 18 17:18 boinc_task_state.xml
[2025-10-18 17:20:06] -rw------- 1 boinc boinc      1023 Oct 18 17:19 memory_monitor_summary.json
[2025-10-18 17:20:06] -rw------- 1 boinc boinc    264985 Oct 18 17:19 log.46771637._012299.job.log.tgz.1
[2025-10-18 17:20:06] -rw------- 1 boinc boinc      7768 Oct 18 17:19 heartbeat.json
[2025-10-18 17:20:06] -rw------- 1 boinc boinc        95 Oct 18 17:19 pilot_heartbeat.json
[2025-10-18 17:20:06] -rw-r--r-- 1 boinc boinc      8192 Oct 18 17:20 boinc_mmap_file
[2025-10-18 17:20:06] -rw-r--r-- 1 boinc boinc        27 Oct 18 17:20 wrapper_checkpoint.txt
[2025-10-18 17:20:06] -rw------- 1 boinc boinc      4752 Oct 18 17:20 pilotlog.txt
[2025-10-18 17:20:06] -rw------- 1 boinc boinc    683724 Oct 18 17:20 log.46771637._012299.job.log.1
[2025-10-18 17:20:06] -rw------- 1 boinc boinc       357 Oct 18 17:20 output.list
[2025-10-18 17:20:06] -rw-r--r-- 1 boinc boinc       620 Oct 18 17:20 runtime_log
[2025-10-18 17:20:06] -rw------- 1 boinc boinc    972800 Oct 18 17:20 result.tar.gz
[2025-10-18 17:20:06] -rw-r--r-- 1 boinc boinc      8792 Oct 18 17:20 runtime_log.err
[2025-10-18 17:20:06] -rw------- 1 boinc boinc       661 Oct 18 17:20 guINDmZaeT8n9Rq4apOajLDm4fhM0noT9bVof3QYDmZWYMDmnzn7rn.diag
[2025-10-18 17:20:06] -rw-r--r-- 1 boinc boinc      6839 Oct 18 17:20 stderr.txt
[2025-10-18 17:20:06] HITS file was successfully produced:
[2025-10-18 17:20:06] -rw------- 1 boinc boinc 205691152 Oct 18 17:18 shared/HITS.pool.root.1
[2025-10-18 17:20:06]  *** Contents of shared directory: ***
[2025-10-18 17:20:06] total 427004
[2025-10-18 17:20:06] -rw-r--r-- 2 boinc boinc 229986138 Oct 18 16:01 ATLAS.root_0
[2025-10-18 17:20:06] -rw-r--r-- 2 boinc boinc    569672 Oct 18 16:01 input.tar.gz
[2025-10-18 17:20:06] -rw-r--r-- 2 boinc boinc     15120 Oct 18 16:01 start_atlas.sh
[2025-10-18 17:20:06] -rw------- 1 boinc boinc 205691152 Oct 18 17:18 HITS.pool.root.1
[2025-10-18 17:20:06] -rw------- 1 boinc boinc    972800 Oct 18 17:20 result.tar.gz
17:20:07 (1932242): run_atlas exited; CPU time 17512.850968
17:20:07 (1932242): called boinc_finish(0)

</stderr_txt>
]]>

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