Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:37:32 (3673827): wrapper (7.7.26015): starting
13:37:32 (3673827): wrapper: running run_atlas (--nthreads 2)
[2025-10-18 13:37:32] Arguments: --nthreads 2
[2025-10-18 13:37:32] Threads: 2
[2025-10-18 13:37:32] Checking for CVMFS
[2025-10-18 13:37:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-18 13:37:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-18 13:37:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-18 13:37:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-18 13:37:33] 2.9.2.0 2907177 3533 61620 151850 3 56 28453813 36864000 0 130560 0 1993092 99.987 131107 2830 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-18 13:37:33] CVMFS is ok
[2025-10-18 13:37:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-18 13:37:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-18 13:37:33] Further information can be found at the LHC@home message board.
[2025-10-18 13:37:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-18 13:37:33] Checking for apptainer binary...
[2025-10-18 13:37:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-18 13:37:33] Running /usr/bin/apptainer --version
[2025-10-18 13:37:33] apptainer version 1.4.1-1.1
[2025-10-18 13:37:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-18 13:37:33] madmaxA275
[2025-10-18 13:37:33] apptainer works
[2025-10-18 13:37:33] Set ATHENA_PROC_NUMBER=2
[2025-10-18 13:37:33] Set ATHENA_CORE_NUMBER=2
[2025-10-18 13:37:33] Starting ATLAS job with PandaID=6848008998
[2025-10-18 13:37:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-18 15:52:04]  *** The last 200 lines of the pilot log: ***
[2025-10-18 15:52:04] 2025-10-18 13:51:22,730 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-18 15:52:04] 2025-10-18 13:51:22,731 | INFO     | aborting loop
[2025-10-18 15:52:04] 2025-10-18 13:51:23,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-18 15:52:04] 2025-10-18 13:51:23,273 | INFO     | [job] retrieve thread has finished
[2025-10-18 15:52:04] 2025-10-18 13:51:23,276 | INFO     | [job] queue monitor thread has finished
[2025-10-18 15:52:04] 2025-10-18 13:51:23,543 | INFO     | [job] control thread has finished
[2025-10-18 15:52:04] 2025-10-18 13:51:23,666 | INFO     | [payload] validate_post thread has finished
[2025-10-18 15:52:04] 2025-10-18 13:51:23,692 | INFO     | [data] control thread has finished
[2025-10-18 15:52:04] 2025-10-18 13:51:23,719 | INFO     | all payload control threads have been joined
[2025-10-18 15:52:04] 2025-10-18 13:51:23,732 | INFO     | [job] job monitor thread has finished
[2025-10-18 15:52:04] 2025-10-18 13:51:23,741 | INFO     | [payload] execute_payloads thread has finished
[2025-10-18 15:52:04] 2025-10-18 13:51:24,017 | INFO     | [data] copytool_in thread has finished
[2025-10-18 15:52:04] 2025-10-18 13:51:24,077 | INFO     | [job] validate thread has finished
[2025-10-18 15:52:04] 2025-10-18 13:51:24,161 | INFO     | [payload] validate_pre thread has finished
[2025-10-18 15:52:04] 2025-10-18 13:51:24,183 | INFO     | [job] create_data_payload thread has finished
[2025-10-18 15:52:04] 2025-10-18 13:51:24,715 | INFO     | [payload] failed_post thread has finished
[2025-10-18 15:52:04] 2025-10-18 13:51:24,725 | INFO     | [payload] control thread has finished
[2025-10-18 15:52:04] 2025-10-18 13:51:25,160 | INFO     | [data] copytool_out thread has finished
[2025-10-18 15:52:04] 2025-10-18 13:51:25,729 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-18 15:52:04] 2025-10-18 13:51:29,732 | INFO     | [data] queue_monitor thread has finished
[2025-10-18 15:52:04] 2025-10-18 13:51:32,660 | INFO     | job.realtimelogging is not enabled
[2025-10-18 15:52:04] 2025-10-18 13:51:33,665 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-18 15:52:04] 2025-10-18 13:51:52,860 | INFO     | PID=3677529 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-18 15:52:04] 2025-10-18 13:51:52,861 | INFO     | found 0 job(s) in 20 queues
[2025-10-18 15:52:04] 2025-10-18 13:51:52,861 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-18 15:52:04] 2025-10-18 13:51:52,861 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-18 15:52:04] 2025-10-18 13:51:57,709 | INFO     | [monitor] cgroup control has ended
[2025-10-18 15:52:04] 2025-10-18 13:51:58,715 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140639874709312)>', '<ExcThread(monitor, started 140639215798016)>']
[2025-10-18 15:52:04] 2025-10-18 13:51:58,893 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-18 15:52:04] 2025-10-18 13:51:58,894 | INFO     | [monitor] control thread has ended
[2025-10-18 15:52:04] 2025-10-18 13:52:03,740 | INFO     | all workflow threads have been joined
[2025-10-18 15:52:04] 2025-10-18 13:52:03,741 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-18 15:52:04] 2025-10-18 13:52:03,742 | INFO     | traces error code: 0
[2025-10-18 15:52:04] 2025-10-18 13:52:03,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-18 15:52:04] 2025-10-18 13:52:03,783 [wrapper] ==== pilot stdout END ====
[2025-10-18 15:52:04] 2025-10-18 13:52:03,786 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-18 15:52:04] 2025-10-18 13:52:03,789 [wrapper] pilotpid: 3677529
[2025-10-18 15:52:04] 2025-10-18 13:52:03,792 [wrapper] Pilot exit status: 0
[2025-10-18 15:52:04] 2025-10-18 13:52:03,798 [wrapper] pandaids: 6848008998
[2025-10-18 15:52:04] 2025-10-18 13:52:03,812 [wrapper] cleanup supervisor_pilot 3698507 3677530
[2025-10-18 15:52:04] 2025-10-18 13:52:03,814 [wrapper] Test setup, not cleaning
[2025-10-18 15:52:04] 2025-10-18 13:52:03,816 [wrapper] apfmon messages muted
[2025-10-18 15:52:04] 2025-10-18 13:52:03,818 [wrapper] ==== wrapper stdout END ====
[2025-10-18 15:52:04] 2025-10-18 13:52:03,820 [wrapper] ==== wrapper stderr END ====
[2025-10-18 15:52:04]  *** Error codes and diagnostics ***
[2025-10-18 15:52:04]     "exeErrorCode": 0,
[2025-10-18 15:52:04]     "exeErrorDiag": "",
[2025-10-18 15:52:04]     "pilotErrorCode": 0,
[2025-10-18 15:52:04]     "pilotErrorDiag": "",
[2025-10-18 15:52:04]  *** Listing of results directory ***
[2025-10-18 15:52:04] total 432216
[2025-10-18 15:52:04] -rw-r--r-- 1 boinc boinc    557409 Oct 17 22:59 pilot3.tar.gz
[2025-10-18 15:52:04] -rwx------ 1 boinc boinc     36292 Oct 17 23:24 runpilot2-wrapper.sh
[2025-10-18 15:52:04] -rw-r--r-- 1 boinc boinc      5112 Oct 17 23:24 queuedata.json
[2025-10-18 15:52:04] -rw-r--r-- 1 boinc boinc       100 Oct 18 13:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-18 15:52:04] -rwxr-xr-x 1 boinc boinc      7986 Oct 18 13:37 run_atlas
[2025-10-18 15:52:04] -rw-r--r-- 1 boinc boinc       105 Oct 18 13:37 job.xml
[2025-10-18 15:52:04] -rw-r--r-- 2 boinc boinc 228541033 Oct 18 13:37 EVNT.46771634._001390.pool.root.1
[2025-10-18 15:52:04] -rw-r--r-- 2 boinc boinc    569678 Oct 18 13:37 input.tar.gz
[2025-10-18 15:52:04] -rw-r--r-- 2 boinc boinc     15120 Oct 18 13:37 start_atlas.sh
[2025-10-18 15:52:04] drwxrwx--x 2 boinc boinc      4096 Oct 18 13:37 shared
[2025-10-18 15:52:04] -rw-r--r-- 1 boinc boinc         0 Oct 18 13:37 boinc_setup_complete
[2025-10-18 15:52:04] -rw-r--r-- 1 boinc boinc      6208 Oct 18 13:37 init_data.xml
[2025-10-18 15:52:04] -rw-r--r-- 1 boinc boinc         0 Oct 18 13:37 boinc_lockfile
[2025-10-18 15:52:04] -rw-r--r-- 1 boinc boinc      2558 Oct 18 13:37 pandaJob.out
[2025-10-18 15:52:04] -rw------- 1 boinc boinc    976750 Oct 18 13:37 agis_schedconf.cvmfs.json
[2025-10-18 15:52:04] -rw------- 1 boinc boinc   1560740 Oct 18 13:37 agis_ddmendpoints.agis.ALL.json
[2025-10-18 15:52:04] drwx------ 5 boinc boinc      4096 Oct 18 13:37 pilot3
[2025-10-18 15:52:04] -rw-r--r-- 1 boinc boinc       529 Oct 18 15:50 boinc_task_state.xml
[2025-10-18 15:52:04] -rw------- 1 boinc boinc 207289273 Oct 18 15:50 HITS.46771637._031818.pool.root.1
[2025-10-18 15:52:04] -rw------- 1 boinc boinc      1017 Oct 18 15:51 memory_monitor_summary.json
[2025-10-18 15:52:04] -rw------- 1 boinc boinc    284075 Oct 18 15:51 log.46771637._031818.job.log.tgz.1
[2025-10-18 15:52:04] -rw------- 1 boinc boinc      7765 Oct 18 15:51 heartbeat.json
[2025-10-18 15:52:04] -rw-r--r-- 1 boinc boinc      8192 Oct 18 15:51 boinc_mmap_file
[2025-10-18 15:52:04] -rw-r--r-- 1 boinc boinc        27 Oct 18 15:51 wrapper_checkpoint.txt
[2025-10-18 15:52:04] -rw------- 1 boinc boinc        95 Oct 18 15:51 pilot_heartbeat.json
[2025-10-18 15:52:04] -rw------- 1 boinc boinc      4824 Oct 18 15:52 pilotlog.txt
[2025-10-18 15:52:04] -rw------- 1 boinc boinc   1150469 Oct 18 15:52 log.46771637._031818.job.log.1
[2025-10-18 15:52:04] -rw------- 1 boinc boinc       357 Oct 18 15:52 output.list
[2025-10-18 15:52:04] -rw-r--r-- 1 boinc boinc       620 Oct 18 15:52 runtime_log
[2025-10-18 15:52:04] -rw------- 1 boinc boinc   1454080 Oct 18 15:52 result.tar.gz
[2025-10-18 15:52:04] -rw-r--r-- 1 boinc boinc      8797 Oct 18 15:52 runtime_log.err
[2025-10-18 15:52:04] -rw------- 1 boinc boinc       663 Oct 18 15:52 S1QLDm766T8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjxuNDmI8zYhn.diag
[2025-10-18 15:52:04] -rw-r--r-- 1 boinc boinc      6963 Oct 18 15:52 stderr.txt
[2025-10-18 15:52:04] HITS file was successfully produced:
[2025-10-18 15:52:04] -rw------- 1 boinc boinc 207289273 Oct 18 15:50 shared/HITS.pool.root.1
[2025-10-18 15:52:04]  *** Contents of shared directory: ***
[2025-10-18 15:52:04] total 427624
[2025-10-18 15:52:04] -rw-r--r-- 2 boinc boinc 228541033 Oct 18 13:37 ATLAS.root_0
[2025-10-18 15:52:04] -rw-r--r-- 2 boinc boinc    569678 Oct 18 13:37 input.tar.gz
[2025-10-18 15:52:04] -rw-r--r-- 2 boinc boinc     15120 Oct 18 13:37 start_atlas.sh
[2025-10-18 15:52:04] -rw------- 1 boinc boinc 207289273 Oct 18 15:50 HITS.pool.root.1
[2025-10-18 15:52:04] -rw------- 1 boinc boinc   1454080 Oct 18 15:52 result.tar.gz
15:52:26 (3673827): run_atlas exited; CPU time 15586.944645
15:52:26 (3673827): called boinc_finish(0)

</stderr_txt>
]]>

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