Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:08:20 (1093531): wrapper (7.7.26015): starting
19:08:20 (1093531): wrapper: running run_atlas (--nthreads 12)
[2025-10-17 19:08:20] Arguments: --nthreads 12
[2025-10-17 19:08:20] Threads: 12
[2025-10-17 19:08:20] Checking for CVMFS
[2025-10-17 19:08:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-17 19:08:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-17 19:08:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-17 19:08:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-17 19:08:21] 2.11.5.0 2588 39515 225940 151834 0 561 44004013 45568001 28320 130560 0 422054603 99.879 165487166 28589 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-17 19:08:21] CVMFS is ok
[2025-10-17 19:08:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-17 19:08:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-17 19:08:21] Further information can be found at the LHC@home message board.
[2025-10-17 19:08:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-17 19:08:21] Checking for apptainer binary...
[2025-10-17 19:08:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-17 19:08:21] Running /usr/bin/apptainer --version
[2025-10-17 19:08:21] apptainer version 1.4.1-1.el9
[2025-10-17 19:08:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-17 19:08:21] wns0080.triumf.lcg
[2025-10-17 19:08:21] apptainer works
[2025-10-17 19:08:21] Set ATHENA_PROC_NUMBER=12
[2025-10-17 19:08:21] Set ATHENA_CORE_NUMBER=12
[2025-10-17 19:08:21] Starting ATLAS job with PandaID=6848013776
[2025-10-17 19:08:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-17 19:14:15]  *** The last 200 lines of the pilot log: ***
[2025-10-17 19:14:15] 2025-10-18 02:13:42,413 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-17 19:14:15] 2025-10-18 02:13:42,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-17 19:14:15] 2025-10-18 02:13:42,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | WARNING  | wrong length of table data, x=[1760753419.0], y=[2461.0] (must be same and length>=4)
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | could have reported an average CPU frequency of 2737 MHz (4 samples)
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | ..............................
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | . Timing measurements:
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | . get job = 0 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | . initial setup = 3 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | . payload setup = 22 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | . stage-in = 0 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,421 | INFO     | . payload execution = 77 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,421 | INFO     | . stage-out = 1 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,421 | INFO     | . log creation = 0 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,421 | INFO     | ..............................
[2025-10-17 19:14:15] 2025-10-18 02:13:42,421 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-17 19:14:15] 2025-10-18 02:13:42,421 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6848013776/pilotlog.txt
[2025-10-17 19:14:15] 2025-10-18 02:13:42,484 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-17 19:14:15] - Log from pilotlog.txt -
[2025-10-17 19:14:15] 2025-10-18 02:13:42,385 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6848013776/memory_monitor_summary.json (trf name=prmon)
[2025-10-17 19:14:15] 2025-10-18 02:13:42,413 | INFO     | extracted standard info from prmon json
[2025-10-17 19:14:15] 2025-10-18 02:13:42,413 | INFO     | extracted standard memory fields from prmon json
[2025-10-17 19:14:15] 2025-10-18 02:13:42,413 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-17 19:14:15] 2025-10-18 02:13:42,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-17 19:14:15] 2025-10-18 02:13:42,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | WARNING  | wrong length of table data, x=[1760753419.0], y=[2461.0] (must be same and length>=4)
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | could have reported an average CPU frequency of 2737 MHz (4 samples)
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | ..............................
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | . Timing measurements:
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | . get job = 0 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | . initial setup = 3 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | . payload setup = 22 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | . stage-in = 0 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,421 | INFO     | . payload execution = 77 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,421 | INFO     | . stage-out = 1 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,421 | INFO     | . log creation = 0 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,421 | INFO     | ..............................
[2025-10-17 19:14:15] 2025-10-18 02:13:42,421 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-17 19:14:15] 2025-10-18 02:13:42,421 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6848013776/pilotlog.txt
[2025-10-17 19:14:15] 2025-10-18 02:13:42,484 | WARNING  | 
[2025-10-17 19:14:15] [begin log extracts]
[2025-10-17 19:14:15] - Log from pilotlog.txt -
[2025-10-17 19:14:15] 2025-10-18 02:13:42,385 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6848013776/memory_monitor_summary.json (trf name=prmon)
[2025-10-17 19:14:15] 2025-10-18 02:13:42,413 | INFO     | extracted standard info from prmon json
[2025-10-17 19:14:15] 2025-10-18 02:13:42,413 | INFO     | extracted standard memory fields from prmon json
[2025-10-17 19:14:15] 2025-10-18 02:13:42,413 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-17 19:14:15] 2025-10-18 02:13:42,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-17 19:14:15] 2025-10-18 02:13:42,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | WARNING  | wrong length of table data, x=[1760753419.0], y=[2461.0] (must be same and length>=4)
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | could have reported an average CPU frequency of 2737 MHz (4 samples)
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | ..............................
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | . Timing measurements:
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | . get job = 0 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | . initial setup = 3 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | . payload setup = 22 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,420 | INFO     | . stage-in = 0 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,421 | INFO     | . payload execution = 77 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,421 | INFO     | . stage-out = 1 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,421 | INFO     | . log creation = 0 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,421 | INFO     | ..............................
[2025-10-17 19:14:15] 2025-10-18 02:13:42,421 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-17 19:14:15] 2025-10-18 02:13:42,421 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6848013776/pilotlog.txt
[2025-10-17 19:14:15] [end log extracts]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,484 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-17 19:14:15] 2025-10-18 02:13:42,485 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-17 19:14:15] 2025-10-18 02:13:42,709 | INFO     | 
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | job summary report
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | --------------------------------------------------
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | PanDA job id: 6848013776
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | task id: 46771637
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-17 19:11:04,731 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | pilot state: failed 
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | transexitcode: 65
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | exeerrorcode: 65
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | exitcode: 65
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | cpuconsumptiontime: 19 s
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | nevents: 0
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | neventsw: 0
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | pid: 1127043
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | pgrp: 1127043
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | corecount: 12
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | event service: False
[2025-10-17 19:14:15] 2025-10-18 02:13:42,710 | INFO     | sizes: {0: 2348755, 1: 2348954, 11: 2348954, 16: 2349244, 22: 2349272, 105: 2372606, 108: 2376898, 111: 2376926, 251: 2377092}
[2025-10-17 19:14:15] 2025-10-18 02:13:42,711 | INFO     | --------------------------------------------------
[2025-10-17 19:14:15] 2025-10-18 02:13:42,711 | INFO     | 
[2025-10-17 19:14:15] 2025-10-18 02:13:42,711 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-17 19:14:15] 2025-10-18 02:13:42,728 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,728 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,728 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,728 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,729 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,729 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,729 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,729 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,729 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,729 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,729 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,729 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,729 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,729 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,729 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,729 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,729 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,729 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-17 19:14:15] 2025-10-18 02:13:42,729 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,729 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-17 19:14:15] 2025-10-18 02:13:42,729 | INFO     | job 6848013776 has completed (purged errors)
[2025-10-17 19:14:15] 2025-10-18 02:13:42,730 | INFO     | overall cleanup function is called
[2025-10-17 19:14:15] 2025-10-18 02:13:43,736 | INFO     | --- collectZombieJob: --- 10, [1127043]
[2025-10-17 19:14:15] 2025-10-18 02:13:43,736 | INFO     | zombie collector waiting for pid 1127043
[2025-10-17 19:14:15] 2025-10-18 02:13:43,736 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-17 19:14:15] 2025-10-18 02:13:43,736 | INFO     | collected zombie processes
[2025-10-17 19:14:15] 2025-10-18 02:13:43,736 | INFO     | will attempt to kill all subprocesses of pid=1127043
[2025-10-17 19:14:15] 2025-10-18 02:13:44,469 | INFO     | process IDs to be killed: [1127043] (in reverse order)
[2025-10-17 19:14:15] 2025-10-18 02:13:44,845 | WARNING  | found no corresponding commands to process id(s)
[2025-10-17 19:14:15] 2025-10-18 02:13:44,846 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-17 19:14:15] 2025-10-18 02:13:44,883 | INFO     | did not find any defunct processes belonging to 1127043
[2025-10-17 19:14:15] 2025-10-18 02:13:44,911 | INFO     | did not find any defunct processes belonging to 1127043
[2025-10-17 19:14:15] 2025-10-18 02:13:44,911 | INFO     | ready for new job
[2025-10-17 19:14:15] 2025-10-18 02:13:44,912 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-17 19:14:15] 2025-10-18 02:13:44,917 | INFO     | ***************************************
[2025-10-17 19:14:15] 2025-10-18 02:13:44,917 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-17 19:14:15] 2025-10-18 02:13:44,917 | INFO     | ***************************************
[2025-10-17 19:14:16] 2025-10-18 02:13:44,917 | INFO     | 
[2025-10-17 19:14:16] 2025-10-18 02:13:44,919 | INFO     | architecture information:
[2025-10-17 19:14:16] 2025-10-18 02:13:44,923 | INFO     | executing command: cat /etc/os-release
[2025-10-17 19:14:16] 2025-10-18 02:13:44,981 | INFO     | cat /etc/os-release:
[2025-10-17 19:14:16] NAME="CentOS Linux"
[2025-10-17 19:14:16] VERSION="7 (Core)"
[2025-10-17 19:14:16] ID="centos"
[2025-10-17 19:14:16] ID_LIKE="rhel fedora"
[2025-10-17 19:14:16] VERSION_ID="7"
[2025-10-17 19:14:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-17 19:14:16] ANSI_COLOR="0;31"
[2025-10-17 19:14:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-17 19:14:16] HOME_URL="https://www.centos.org/"
[2025-10-17 19:14:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-17 19:14:16] 
[2025-10-17 19:14:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-17 19:14:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-17 19:14:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-17 19:14:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-17 19:14:16] 
[2025-10-17 19:14:16] 2025-10-18 02:13:44,981 | INFO     | ***************************************
[2025-10-17 19:14:16] 2025-10-18 02:13:45,485 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-17 19:14:16] 2025-10-18 02:13:45,540 | INFO     | sufficient remaining disk space (1900211601408 B)
[2025-10-17 19:14:16] 2025-10-18 02:13:45,542 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-17 19:14:16] 2025-10-18 02:13:45,544 | INFO     | current server update state: UPDATING_FINAL
[2025-10-17 19:14:16] 2025-10-18 02:13:45,544 | INFO     | update_server=False
[2025-10-17 19:14:16] 2025-10-18 02:13:45,545 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-17 19:14:16] 2025-10-18 02:13:45,549 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-17 19:14:16] 2025-10-18 02:13:46,159 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-17 19:14:16] 2025-10-18 02:13:46,329 | INFO     | all data control threads have been joined
[2025-10-17 19:14:16] 2025-10-18 02:13:46,472 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-17 19:14:16] 2025-10-18 02:13:46,472 | INFO     | aborting loop
[2025-10-17 19:14:16] 2025-10-18 02:13:46,555 | INFO     | [job] retrieve thread has finished
[2025-10-17 19:14:16] 2025-10-18 02:13:46,569 | INFO     | all payload control threads have been joined
[2025-10-17 19:14:16] 2025-10-18 02:13:46,684 | INFO     | all job control threads have been joined
[2025-10-17 19:14:16] 2025-10-18 02:13:46,713 | INFO     | [payload] failed_post thread has finished
[2025-10-17 19:14:16] 2025-10-18 02:13:46,941 | INFO     | [data] copytool_in thread has finished
[2025-10-17 19:14:16] 2025-10-18 02:13:47,126 | INFO     | [payload] execute_payloads thread has finished
[2025-10-17 19:14:16] 2025-10-18 02:13:47,190 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-17 19:14:16] 2025-10-18 02:13:47,335 | INFO     | [data] control thread has finished
[2025-10-17 19:14:16] 2025-10-18 02:13:47,411 | INFO     | [payload] validate_post thread has finished
[2025-10-17 19:14:16] 2025-10-18 02:13:47,486 | INFO     | [job] job monitor thread has finished
[2025-10-17 19:14:16] 2025-10-18 02:13:47,575 | INFO     | [payload] control thread has finished
[2025-10-17 19:14:16] 2025-10-18 02:13:47,696 | INFO     | [job] control thread has finished
[2025-10-17 19:14:16] 2025-10-18 02:13:47,724 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-17 19:14:16] 2025-10-18 02:13:47,780 | INFO     | [job] create_data_payload thread has finished
[2025-10-17 19:14:16] 2025-10-18 02:13:47,900 | INFO     | [job] validate thread has finished
[2025-10-17 19:14:16] 2025-10-18 02:13:47,981 | INFO     | [payload] validate_pre thread has finished
[2025-10-17 19:14:16] 2025-10-18 02:13:48,166 | INFO     | [data] copytool_out thread has finished
[2025-10-17 19:14:16] 2025-10-18 02:13:48,730 | INFO     | [job] queue monitor thread has finished
[2025-10-17 19:14:16] 2025-10-18 02:13:49,558 | INFO     | [data] queue_monitor thread has finished
[2025-10-17 19:14:16] 2025-10-18 02:13:51,822 | INFO     | [monitor] cgroup control has ended
[2025-10-17 19:14:16] 2025-10-18 02:13:53,077 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140236660746048)>', '<ExcThread(monitor, started 140236331910912)>']
[2025-10-17 19:14:16] 2025-10-18 02:13:58,103 | INFO     | all workflow threads have been joined
[2025-10-17 19:14:16] 2025-10-18 02:13:58,103 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-17 19:14:16] 2025-10-18 02:13:58,103 | INFO     | traces error code: 0
[2025-10-17 19:14:16] 2025-10-18 02:13:58,103 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-17 19:14:16] 2025-10-18 02:14:15,016 | INFO     | PID=1099269 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-17 19:14:16] 2025-10-18 02:14:15,016 | INFO     | .. there are 49 such processes running
[2025-10-17 19:14:16] 2025-10-18 02:14:15,017 | INFO     | found 0 job(s) in 20 queues
[2025-10-17 19:14:16] 2025-10-18 02:14:15,017 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-17 19:14:16] 2025-10-18 02:14:15,017 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-17 19:14:16] 2025-10-18 02:14:15,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-17 19:14:16] 2025-10-18 02:14:15,017 | INFO     | [monitor] control thread has ended
[2025-10-17 19:14:16] 2025-10-18 02:14:15,600 [wrapper] ==== pilot stdout END ====
[2025-10-17 19:14:16] 2025-10-18 02:14:15,618 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-17 19:14:16] 2025-10-18 02:14:15,620 [wrapper] pilotpid: 1099269
[2025-10-17 19:14:16] 2025-10-18 02:14:15,622 [wrapper] Pilot exit status: 0
[2025-10-17 19:14:16] 2025-10-18 02:14:15,634 [wrapper] pandaids: 6848013776
[2025-10-17 19:14:16] 2025-10-18 02:14:15,709 [wrapper] cleanup supervisor_pilot 1099281 1099270
[2025-10-17 19:14:16] 2025-10-18 02:14:15,717 [wrapper] Test setup, not cleaning
[2025-10-17 19:14:16] 2025-10-18 02:14:15,719 [wrapper] apfmon messages muted
[2025-10-17 19:14:16] 2025-10-18 02:14:15,721 [wrapper] ==== wrapper stdout END ====
[2025-10-17 19:14:16] 2025-10-18 02:14:15,723 [wrapper] ==== wrapper stderr END ====
[2025-10-17 19:14:16]  *** Error codes and diagnostics ***
[2025-10-17 19:14:16]     "exeErrorCode": 65,
[2025-10-17 19:14:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-17 19:14:16]     "pilotErrorCode": 1305,
[2025-10-17 19:14:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-17 19:14:16]  *** Listing of results directory ***
[2025-10-17 19:14:16] total 227044
[2025-10-17 19:14:16] -rw-r--r--. 1 boinc boinc    557409 Oct 17 14:42 pilot3.tar.gz
[2025-10-17 19:14:16] -rw-r--r--. 1 boinc boinc      5112 Oct 17 14:47 queuedata.json
[2025-10-17 19:14:16] -rwx------. 1 boinc boinc     36292 Oct 17 14:47 runpilot2-wrapper.sh
[2025-10-17 19:14:16] -rw-r--r--. 1 boinc boinc       100 Oct 17 19:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-17 19:14:16] -rwxr-xr-x. 1 boinc boinc      7986 Oct 17 19:08 run_atlas
[2025-10-17 19:14:16] -rw-r--r--. 1 boinc boinc       105 Oct 17 19:08 job.xml
[2025-10-17 19:14:16] -rw-r--r--. 2 boinc boinc 228351688 Oct 17 19:08 EVNT.46771634._001421.pool.root.1
[2025-10-17 19:14:16] -rw-r--r--. 1 boinc boinc      6593 Oct 17 19:08 init_data.xml
[2025-10-17 19:14:16] drwxrwx--x. 2 boinc boinc      4096 Oct 17 19:08 shared
[2025-10-17 19:14:16] -rw-r--r--. 2 boinc boinc    569674 Oct 17 19:08 input.tar.gz
[2025-10-17 19:14:16] -rw-r--r--. 2 boinc boinc     15120 Oct 17 19:08 start_atlas.sh
[2025-10-17 19:14:16] -rw-r--r--. 1 boinc boinc         0 Oct 17 19:08 boinc_lockfile
[2025-10-17 19:14:16] -rw-r--r--. 1 boinc boinc      2558 Oct 17 19:08 pandaJob.out
[2025-10-17 19:14:16] -rw-------. 1 boinc boinc    976749 Oct 17 19:08 agis_schedconf.cvmfs.json
[2025-10-17 19:14:16] -rw-------. 1 boinc boinc   1560740 Oct 17 19:08 agis_ddmendpoints.agis.ALL.json
[2025-10-17 19:14:16] drwx------. 5 boinc boinc      4096 Oct 17 19:08 pilot3
[2025-10-17 19:14:16] -rw-r--r--. 1 boinc boinc       524 Oct 17 19:11 boinc_task_state.xml
[2025-10-17 19:14:16] -rw-------. 1 boinc boinc       966 Oct 17 19:11 memory_monitor_summary.json
[2025-10-17 19:14:16] -rw-------. 1 boinc boinc     22601 Oct 17 19:11 log.46771637._032409.job.log.tgz.1
[2025-10-17 19:14:16] -rw-------. 1 boinc boinc      8392 Oct 17 19:13 heartbeat.json
[2025-10-17 19:14:16] -rw-r--r--. 1 boinc boinc      8192 Oct 17 19:14 boinc_mmap_file
[2025-10-17 19:14:16] -rw-r--r--. 1 boinc boinc        23 Oct 17 19:14 wrapper_checkpoint.txt
[2025-10-17 19:14:16] -rw-------. 1 boinc boinc        95 Oct 17 19:14 pilot_heartbeat.json
[2025-10-17 19:14:16] -rw-------. 1 boinc boinc       823 Oct 17 19:14 pilotlog.txt
[2025-10-17 19:14:16] -rw-------. 1 boinc boinc     96195 Oct 17 19:14 log.46771637._032409.job.log.1
[2025-10-17 19:14:16] -rw-------. 1 boinc boinc       188 Oct 17 19:14 output.list
[2025-10-17 19:14:16] -rw-r--r--. 1 boinc boinc       620 Oct 17 19:14 runtime_log
[2025-10-17 19:14:16] -rw-------. 1 boinc boinc    143360 Oct 17 19:14 result.tar.gz
[2025-10-17 19:14:16] -rw-r--r--. 1 boinc boinc      8528 Oct 17 19:14 runtime_log.err
[2025-10-17 19:14:16] -rw-------. 1 boinc boinc       646 Oct 17 19:14 lVyNDmTT7T8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmc3uNDmnEJFPm.diag
[2025-10-17 19:14:16] -rw-r--r--. 1 boinc boinc     21806 Oct 17 19:14 stderr.txt
[2025-10-17 19:14:16] No HITS result produced
[2025-10-17 19:14:16]  *** Contents of shared directory: ***
[2025-10-17 19:14:16] total 223720
[2025-10-17 19:14:16] -rw-r--r--. 2 boinc boinc 228351688 Oct 17 19:08 ATLAS.root_0
[2025-10-17 19:14:16] -rw-r--r--. 2 boinc boinc    569674 Oct 17 19:08 input.tar.gz
[2025-10-17 19:14:16] -rw-r--r--. 2 boinc boinc     15120 Oct 17 19:08 start_atlas.sh
[2025-10-17 19:14:16] -rw-------. 1 boinc boinc    143360 Oct 17 19:14 result.tar.gz
19:14:18 (1093531): run_atlas exited; CPU time 30.066944
19:14:18 (1093531): called boinc_finish(0)

</stderr_txt>
]]>

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